cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
AA758018 | RNF32.s | 15 to 483 | 468 to 1 | tiling clone, | 468/468 (100 %) | 1 diff (99.8 %id) | |||
AF325690 | RNF32.c | 115 to 1781 | 1 to 1667 | exact | 1667/1667 (100 %) | 0 diff (100 %id) | |||
AF441222 | RNF32.c | 176 to 1816 | 1 to 1641 | exact | tiling clone, | 1641/1641 (100 %) | 0 diff (100 %id) | ||
AF441224 | RNF32.e | 176 to 1923 | 1 to 1748 | exact | tiling clone, | 1748/1748 (100 %) | 0 diff (100 %id) | ||
AK307316 | testis | RNF32.q | 1 to 962 | 2 to 963 | exact | tiling clone, | 963/963 (100 %) | 0 diff (100 %id) | |
AK314067 | trachea | RNF32.b | 1 to 1423 | 2 to 1425 | L26S F224I F225L E226* | tiling clone, | 1425/1425 (100 %) | 3 diff (99.8 %id) | |
AL136874 | testis | RNF32.a | 118 to 1793 | 1 to 1676 | exact | tiling clone, available from DKFZ, AAA | 1676/1676 (100 %) | 0 diff (100 %id) | |
AW382213 | head_neck | RNF32.d | 1633 to 1762 | 137 to 7 | 131/145 (90 %) | 0 diff (100 %id) | |||
AW796606 | uterus | RNF32.c | 47 to 391 | 1 to 345 | tiling clone, | 345/345 (100 %) | 2 diff (99.5 %id) | ||
BC015416 | Duodenum, adenocarcinoma | RNF32.g | 1 to 2259 | 1 to 2259 | exact | tiling clone, available from MGC, AAA | 2259/2259 (100 %) | 0 diff (100 %id) | |
BF083058 | colon_est | RNF32.d | 1426 to 1735 | 323 to 14 | 310/323 (95 %) | 0 diff (100 %id) | |||
DA281454 | corpus callosum | RNF32.p | 1 to 547 | 2 to 550 | R42L R43E G44R F45L G46R ... | tiling clone, capped | 549/549 (100 %) | 2 diff (99.7 %id) | |
DA318166 | hippocampus | RNF32.p | 294 to 783 | 2 to 492 | capped | 491/491 (100 %) | 1 diff (99.8 %id) | ||
DB308925 | hippocampus | RNF32.p | 1867 to 2363 | 498 to 1 | tiling clone, | 497/500 (99 %) | 4 diff (99.2 %id) | ||
BT007037 | RNF32.g | 89 to 795 | 1 to 707 | 707/708 (99 %) | 1 diff (99.9 %id) | ||||
BX109196 | RNF32.k | 227 to 925 | 1 to 699 | exact | tiling clone, | 699/700 (99 %) | 1 diff (99.9 %id) | ||
BX117234 | liver and spleen | RNF32.r-u | 7 to 803 | 1 to 797 | exact | tiling clone, | 797/797 (100 %) | 1 diff (99.9 %id) | |
CN293559 | embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 | RNF32.g | 1215 to 1840 | 626 to 1 | Submitted on the opposite strand | 626/626 (100 %) | 0 diff (100 %id) | ||
CN294886 | embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 | RNF32.g | 1969 to 2342 | 374 to 1 | Submitted on the opposite strand | 374/374 (100 %) | 0 diff (100 %id) | ||
CR533513 | RNF32.c | 253 to 1408 | 1 to 1156 | L97P | 1156/1156 (100 %) | 3 diff (99.8 %id) | |||
CR599570 | B cells (Ramos cell line) Cot 25-normalized | RNF32.j | 34 to 937 | 1 to 904 | exact | tiling clone, | 904/904 (100 %) | 0 diff (100 %id) | |
CR736271 | RNF32.k | 227 to 925 | 1 to 699 | exact | 699/700 (99 %) | 1 diff (99.9 %id) | |||
AL561416 | B cells from Burkitt lymphoma | RNF32.j | 209 to 905 | 696 to 1 | P84X A92E L95X L97X V113S ... | fully sequenced, | 696/696 (100 %) | 8 diff (98.9 %id) | |
AL561441 | B cells from Burkitt lymphoma | RNF32.j | 34 to 937 | 1 to 912 | D12Y A15S V16F D61X Q69X ... | fully sequenced, | 910/910 (100 %) | 26 diff (97.2 %id) | |
CA396731 | eye, RPE/choroid | RNF32.t-u | 1 to 448 | 1 to 448 | exact | tiling clone, | 448/448 (100 %) | 0 diff (100 %id) | |
CV023936 | mixed | RNF32.a | 236 to 865 | 1 to 630 | 630/630 (100 %) | 4 diff (99.4 %id) | |||
CV030419 | mixed | RNF32.a | 236 to 626 | 1 to 391 | 391/391 (100 %) | 6 diff (98.5 %id) | |||
FN122791 | breast carcinoma | RNF32.a | 249 to 324 | 8 to 83 | 76/84 (90 %) | 1 diff (98.9 %id) | |||
DB443531 | testis | RNF32.c | 1 to 308 | 1 to 308 | tiling clone, | 308/308 (100 %) | 3 diff (99.1 %id) | ||
DB508471 | testis | RNF32.d | 1443 to 1838 | 10 to 407 | AAA | Submitted on the opposite strand | 398/407 (97 %) | 6 diff (98.6 %id) | |
DB445126 | testis | RNF32.a | 6 to 342 | 1 to 337 | tiling clone, | 337/337 (100 %) | 5 diff (98.6 %id) | ||
DB510125 | testis | RNF32.d | 1480 to 1832 | 1 to 354 | Submitted on the opposite strand | 354/354 (100 %) | 5 diff (98.6 %id) | ||
DB449294 | testis | RNF32.j | 1 to 418 | 1 to 418 | tiling clone, | 418/418 (100 %) | 1 diff (99.8 %id) | ||
DB514317 | testis | RNF32.d | 1404 to 1832 | 1 to 428 | Submitted on the opposite strand | 428/428 (100 %) | 2 diff (99.6 %id) | ||
DB450121 | testis | RNF32.a | 107 to 561 | 1 to 452 | 452/452 (100 %) | 7 diff (98.5 %id) | |||
DB515733 | testis | RNF32.d | 1390 to 1836 | 1 to 449 | Submitted on the opposite strand | 449/451 (99 %) | 13 diff (97.2 %id) | ||
DB459444. matches multiple genes | testis | RNF32.m | 1 to 475 | 1 to 475 | exact | tiling clone, | also hits gene sneychubu | 475/475 (100 %) | 1 diff (99.8 %id) |
DB479004 | hippocampus | RNF32.e | 1 to 513 | 1 to 513 | tiling clone, | 513/513 (100 %) | 0 diff (100 %id) | ||
DB547672 | hippocampus | RNF32.j | 501 to 935 | 1 to 435 | Submitted on the opposite strand | 435/436 (99 %) | 1 diff (99.8 %id) | ||
N34954 | multiple sclerosis lesions | RNF32.a | 1357 to 1788 | 433 to 1 | 433/435 (99 %) | 3 diff (99.4 %id) | |||
N44021 | multiple sclerosis lesions | RNF32.a | 870 to 1088 | 1 to 219 | 219/226 (96 %) | 1 diff (99.6 %id) | |||
N45525 | multiple sclerosis lesions | RNF32.i | 1 to 517 | 1 to 526 | tiling clone, | 526/541 (97 %) | 20 diff (96.4 %id) | ||
N48673 | multiple sclerosis lesions | RNF32.i | 1013 to 1391 | 406 to 27 | tiling clone, AAA | 380/380 (100 %) | 4 diff (99.0 %id) | ||
N51460 | multiple sclerosis lesions | RNF32.d | 1354 to 1832 | 485 to 2 | 484/487 (99 %) | 0 diff (100 %id) | |||
N53600 | multiple sclerosis lesions | RNF32.d | 1158 to 1331 | 1 to 172 | 172/172 (100 %) | 4 diff (97.7 %id) | |||
W86472 | liver and spleen | RNF32.r-u | 376 to 831 | 456 to 1 | tiling clone, fully sequenced, | 456/456 (100 %) | 0 diff (100 %id) | ||
W86549 | liver and spleen | RNF32.r-u | 1 to 406 | 8 to 417 | K12X | tiling clone, fully sequenced, | 410/417 (98 %) | 8 diff (98.1 %id) | |
AA009567 | liver and spleen | RNF32.r-u | 7 to 454 | 1 to 453 | exact | fully sequenced, | 453/453 (100 %) | 6 diff (98.7 %id) | |
AA009791 | liver and spleen | RNF32.r-u | 424 to 831 | 410 to 1 | fully sequenced, | 410/410 (100 %) | 2 diff (99.6 %id) | ||
AA412402 | RNF32.k | 226 to 633 | 10 to 417 | 408/417 (97 %) | 6 diff (98.6 %id) | ||||
AA412403 | RNF32.k | 667 to 1032 | 363 to 1 | tiling clone, | 363/363 (100 %) | 7 diff (98.1 %id) | |||
AA626330 | RNF32.d | 1482 to 1834 | 362 to 8 | 355/362 (98 %) | 0 diff (100 %id) | ||||
AA581432 | bulk tumor, colon | RNF32.d | 1355 to 1838 | 484 to 1 | 484/484 (100 %) | 1 diff (99.8 %id) | |||
AA904554 | pooled | RNF32.j | 545 to 904 | 363 to 4 | 360/363 (99 %) | 0 diff (100 %id) | |||
AA968469 | pooled | RNF32.s | 1 to 483 | 482 to 2 | D12I K14N P15R P16R P17R ... | tiling clone, | 481/482 (99 %) | 1 diff (99.8 %id) | |
AI024391 | RNF32.j | 491 to 912 | 424 to 3 | 422/424 (99 %) | 0 diff (100 %id) | ||||
AI190316 | RNF32.d | 1388 to 1844 | 457 to 1 | tiling clone, | 457/457 (100 %) | 0 diff (100 %id) | |||
AI217423 | pooled | RNF32.o | 1 to 391 | 395 to 4 | F60I F61L E62* | tiling clone, | 392/395 (99 %) | 1 diff (99.8 %id) | |
AI425010 | pooled | RNF32.g | 891 to 1342 | 454 to 3 | 452/454 (99 %) | 0 diff (100 %id) | |||
AI472192 | pooled | RNF32.d | 1372 to 1838 | 482 to 16 | AAA | 467/467 (100 %) | 0 diff (100 %id) | ||
AI699962 | pooled germ cell tumors | RNF32.j | 670 to 935 | 290 to 23 | AAA | 268/268 (100 %) | 3 diff (98.9 %id) | ||
AI970328 | lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) | RNF32.j | 519 to 815 | 297 to 1 | 297/297 (100 %) | 4 diff (98.7 %id) | |||
AW072383 | pooled | RNF32.g | 446 to 901 | 462 to 7 | 456/462 (98 %) | 0 diff (100 %id) | |||
AW301010 | colon, moderately differentiated adenocarcinoma | RNF32.d | 1409 to 1838 | 449 to 20 | AAA | 430/430 (100 %) | 1 diff (99.8 %id) | ||
AW296404 | RNF32.d | 1502 to 1816 | 336 to 21 | 316/337 (93 %) | 0 diff (100 %id) | ||||
AW269590 | pooled | RNF32.j | 822 to 1097 | 276 to 1 | 276/276 (100 %) | 5 diff (98.2 %id) | |||
AW510671 | pooled | RNF32.n | 1 to 460 | 465 to 5 | exact | tiling clone, | 461/465 (99 %) | 0 diff (100 %id) | |
AW341694 | pooled | RNF32.d | 1387 to 1842 | 457 to 1 | 457/457 (100 %) | 6 diff (98.7 %id) | |||
AW665547 | pooled | RNF32.f | 647 to 1146 | 500 to 1 | tiling clone, | 500/500 (100 %) | 2 diff (99.6 %id) | ||
AW779156 | pooled | RNF32.d | 1548 to 1844 | 302 to 3 | 300/302 (99 %) | 0 diff (100 %id) | |||
BF508748 | RNF32.j | 585 to 1192 | 625 to 18 | tiling clone, AAA | 608/628 (96 %) | 1 diff (99.9 %id) | |||
BF508016 | RNF32.j | 292 to 775 | 1 to 484 | G145R | Submitted on the opposite strand | 484/484 (100 %) | 6 diff (98.8 %id) | ||
BE503002 | carcinoid, lung | RNF32.d | 1334 to 1838 | 505 to 1 | 505/505 (100 %) | 0 diff (100 %id) | |||
BF980783 | duodenal adenocarcinoma, cell line, small intestine | RNF32.g | 1 to 770 | 1 to 773 | 773/1101 (70 %) | 18 diff (98.4 %id) | |||
BG717434 | testis | RNF32.a | 53 to 834 | 1 to 781 | 781/781 (100 %) | 9 diff (98.9 %id) | |||
BG717871 | testis | RNF32.k | 1 to 744 | 1 to 740 | tiling clone, | 740/740 (100 %) | 15 diff (98.0 %id) | ||
BG772012 | testis | RNF32.f | 1 to 850 | 1 to 840 | tiling clone, | 840/858 (97 %) | 17 diff (98.1 %id) | ||
BG772014 | testis | RNF32.h | 1 to 793 | 7 to 801 | D12G N171E Q172P Y173V Q174S ... | tiling clone, | 795/804 (98 %) | 15 diff (98.2 %id) | |
BC028120 | Brain, adult medulla | RNF32.d | 3 to 1832 | 1 to 1828 | K223N F224S F225L E226K K228S ... | tiling clone, available from MGC, AAA | 1828/1828 (100 %) | 2 diff (99.9 %id) | |
BI829887 | brain, medulla | RNF32.d | 1 to 730 | 1 to 733 | tiling clone, available from MGC, | 733/733 (100 %) | 8 diff (99.0 %id) | ||
BI829402 | brain, medulla | RNF32.a | 369 to 1088 | 1 to 723 | 723/743 (97 %) | 14 diff (98.2 %id) | |||
BI460257 | testis | RNF32.a | 1 to 670 | 1 to 668 | tiling clone, | 668/669 (99 %) | 8 diff (98.9 %id) | ||
BI465216 | testis | RNF32.a | 78 to 830 | 12 to 766 | 755/766 (98 %) | 27 diff (96.5 %id) | |||
BI461139 | testis | RNF32.a | 50 to 856 | 1 to 812 | 812/813 (99 %) | 22 diff (97.3 %id) | |||
BI561658 | testis | RNF32.a | 49 to 890 | 1 to 853 | 853/864 (98 %) | 32 diff (96.3 %id) | |||
CX752064 | Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass | RNF32.l-u | 1 to 525 | 524 to 1 | tiling clone, | 524/711 (73 %) | 24 diff (96.7 %id) | ||
TI_57176470 | RNF32.d | 1 to 730 | 67 to 799 | 733/799 (91 %) | 14 diff (98.3 %id) | ||||
TI_57176842 | RNF32.a | 369 to 1088 | 69 to 791 | 723/811 (89 %) | 20 diff (97.6 %id) | ||||
TI_44350623 | RNF32.a | 54 to 890 | 132 to 979 | 848/990 (85 %) | 33 diff (96.7 %id) | ||||
NM_030936.2 | RNF32.a | 54 to 1793 | 1 to 1740 | exact | RefSeq, AAA | 1740/1740 (100 %) | 0 diff (100 %id) | ||
NM_001184996.1 | RNF32.b | 1 to 1892 | 2 to 1893 | exact | RefSeq, AAA | 1893/1893 (100 %) | 0 diff (100 %id) | ||
NM_001184997.1 | RNF32.c | 65 to 1816 | 1 to 1752 | exact | RefSeq, | 1752/1752 (100 %) | 0 diff (100 %id) | ||
TI_1948100944 | RNF32.g | 81 to 412 | 124 to 455 | fully sequenced, | 332/353 (94 %) | 6 diff (98.4 %id) | |||
TI_1948100945 | RNF32.g | 382 to 795 | 539 to 126 | fully sequenced, | 414/539 (76 %) | 0 diff (100 %id) | |||
TI_1948101100 | RNF32.g | 101 to 795 | 826 to 123 | 704/1326 (53 %) | 31 diff (97.7 %id) | ||||
TI_1948101248 | RNF32.a | 386 to 911 | 692 to 159 | 534/1426 (37 %) | 24 diff (98.4 %id) | ||||
TI_1948101385 | RNF32.g | 119 to 795 | 794 to 111 | 684/1247 (54 %) | 47 diff (96.3 %id) | ||||
TI_1948101582 | RNF32.a | 228 to 1010 | 117 to 902 | fully sequenced, | 786/902 (87 %) | 18 diff (98.1 %id) | |||
TI_1948101583 | RNF32.a | 622 to 1006 | 505 to 122 | fully sequenced, | 384/505 (76 %) | 1 diff (99.9 %id) | |||
TI_1948101747 | RNF32.a | 355 to 1006 | 789 to 130 | 660/1371 (48 %) | 32 diff (97.7 %id) | ||||
TI_1948101915 | RNF32.a | 228 to 445 | 121 to 338 | fully sequenced, | 218/238 (91 %) | 6 diff (97.5 %id) | |||
TI_1948101916 | RNF32.a | 415 to 1006 | 719 to 124 | fully sequenced, | 596/719 (82 %) | 11 diff (98.5 %id) | |||
TI_1948102085 | RNF32.a | 228 to 1004 | 123 to 905 | fully sequenced, | 783/905 (86 %) | 20 diff (97.8 %id) | |||
TI_1948102086 | RNF32.a | 622 to 1006 | 505 to 122 | fully sequenced, | 384/505 (76 %) | 1 diff (99.9 %id) | |||
DB027542 | testis | RNF32.f | 26 to 571 | 2 to 547 | tiling clone, capped | 546/546 (100 %) | 0 diff (100 %id) | ||
DB032716 | testis | RNF32.q | 1 to 545 | 2 to 546 | capped | 545/545 (100 %) | 0 diff (100 %id) | ||
DB036207 | testis | RNF32.a | 121 to 670 | 2 to 551 | capped | 550/550 (100 %) | 2 diff (99.7 %id) | ||
DB095317 | testis | RNF32.p | 498 to 1054 | 2 to 558 | tiling clone, capped | 557/557 (100 %) | 0 diff (100 %id) | ||
DB198291 | trachea | RNF32.b | 1 to 572 | 2 to 573 | capped | 572/572 (100 %) | 2 diff (99.7 %id) | ||
DB348211 | trachea | RNF32.b | 1327 to 1892 | 566 to 1 | tiling clone, | 566/566 (100 %) | 0 diff (100 %id) | ||
AW967960 | RNF32.a | 415 to 1006 | 719 to 124 | This clone was ignored | 596/719 (82 %) | 11 diff (98.5 %id) | |||
AY251165 | testis | RNF32.a | 228 to 1004 | 123 to 905 | Suspected internal deletion, this clone was ignored | 783/905 (86 %) | 20 diff (97.8 %id) | ||
R60654 | whole brain | RNF32.a | 622 to 1006 | 505 to 122 | This clone was ignored | 384/505 (76 %) | 1 diff (99.9 %id) | ||
R60655 | whole brain | RNF32.f | 26 to 571 | 2 to 547 | tiling clone, | This clone was ignored | 546/546 (100 %) | 0 diff (100 %id) | |
BG399940 | Kidney | RNF32.q | 1 to 545 | 2 to 546 | Submitted on the opposite strand | 545/545 (100 %) | 0 diff (100 %id) | ||
DB067470 | testis | RNF32.a | 121 to 670 | 2 to 551 | capped | 550/550 (100 %) | 2 diff (99.7 %id) | ||
DB339842 | testis | RNF32.p | 498 to 1054 | 2 to 558 | tiling clone, | 557/557 (100 %) | 0 diff (100 %id) | ||
DB198291 | trachea | RNF32.b | 1 to 572 | 2 to 573 | capped | 572/572 (100 %) | 2 diff (99.7 %id) | ||
DB348211 | trachea | RNF32.b | 1327 to 1892 | 566 to 1 | tiling clone, | 566/566 (100 %) | 0 diff (100 %id) |