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Gene RNF32TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
102 supporting clones for gene RNF32 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AA758018   RNF32.s 15 to 483 468 to 1   tiling clone,   468/468
(100 %)
1 diff
(99.8 %id)
AF325690   RNF32.c 115 to 1781 1 to 1667 exact     1667/1667
(100 %)
0 diff
(100 %id)
AF441222   RNF32.c 176 to 1816 1 to 1641 exact tiling clone,   1641/1641
(100 %)
0 diff
(100 %id)
AF441224   RNF32.e 176 to 1923 1 to 1748 exact tiling clone,   1748/1748
(100 %)
0 diff
(100 %id)
AK307316 testis RNF32.q 1 to 962 2 to 963 exact tiling clone,   963/963
(100 %)
0 diff
(100 %id)
AK314067 trachea RNF32.b 1 to 1423 2 to 1425 L26S F224I F225L E226* tiling clone,   1425/1425
(100 %)
3 diff
(99.8 %id)
AL136874 testis RNF32.a 118 to 1793 1 to 1676 exact tiling clone, available from DKFZ, AAA   1676/1676
(100 %)
0 diff
(100 %id)
AW382213 head_neck RNF32.d 1633 to 1762 137 to 7       131/145
(90 %)
0 diff
(100 %id)
AW796606 uterus RNF32.c 47 to 391 1 to 345   tiling clone,   345/345
(100 %)
2 diff
(99.5 %id)
BC015416 Duodenum, adenocarcinoma RNF32.g 1 to 2259 1 to 2259 exact tiling clone, available from MGC, AAA   2259/2259
(100 %)
0 diff
(100 %id)
BF083058 colon_est RNF32.d 1426 to 1735 323 to 14       310/323
(95 %)
0 diff
(100 %id)
DA281454 corpus callosum RNF32.p 1 to 547 2 to 550 R42L R43E G44R F45L G46R ... tiling clone, capped   549/549
(100 %)
2 diff
(99.7 %id)
DA318166 hippocampus RNF32.p 294 to 783 2 to 492   capped   491/491
(100 %)
1 diff
(99.8 %id)
DB308925 hippocampus RNF32.p 1867 to 2363 498 to 1   tiling clone,   497/500
(99 %)
4 diff
(99.2 %id)
BT007037   RNF32.g 89 to 795 1 to 707       707/708
(99 %)
1 diff
(99.9 %id)
BX109196   RNF32.k 227 to 925 1 to 699 exact tiling clone,   699/700
(99 %)
1 diff
(99.9 %id)
BX117234 liver and spleen RNF32.r-u 7 to 803 1 to 797 exact tiling clone,   797/797
(100 %)
1 diff
(99.9 %id)
CN293559 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 RNF32.g 1215 to 1840 626 to 1     Submitted on the opposite strand 626/626
(100 %)
0 diff
(100 %id)
CN294886 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 RNF32.g 1969 to 2342 374 to 1     Submitted on the opposite strand 374/374
(100 %)
0 diff
(100 %id)
CR533513   RNF32.c 253 to 1408 1 to 1156 L97P     1156/1156
(100 %)
3 diff
(99.8 %id)
CR599570 B cells (Ramos cell line) Cot 25-normalized RNF32.j 34 to 937 1 to 904 exact tiling clone,   904/904
(100 %)
0 diff
(100 %id)
CR736271   RNF32.k 227 to 925 1 to 699 exact     699/700
(99 %)
1 diff
(99.9 %id)
AL561416 B cells from Burkitt lymphoma RNF32.j 209 to 905 696 to 1 P84X A92E L95X L97X V113S ... fully sequenced,   696/696
(100 %)
8 diff
(98.9 %id)
AL561441 B cells from Burkitt lymphoma RNF32.j 34 to 937 1 to 912 D12Y A15S V16F D61X Q69X ... fully sequenced,   910/910
(100 %)
26 diff
(97.2 %id)
CA396731 eye, RPE/choroid RNF32.t-u 1 to 448 1 to 448 exact tiling clone,   448/448
(100 %)
0 diff
(100 %id)
CV023936 mixed RNF32.a 236 to 865 1 to 630       630/630
(100 %)
4 diff
(99.4 %id)
CV030419 mixed RNF32.a 236 to 626 1 to 391       391/391
(100 %)
6 diff
(98.5 %id)
FN122791 breast carcinoma RNF32.a 249 to 324 8 to 83       76/84
(90 %)
1 diff
(98.9 %id)
DB443531 testis RNF32.c 1 to 308 1 to 308   tiling clone,   308/308
(100 %)
3 diff
(99.1 %id)
DB508471 testis RNF32.d 1443 to 1838 10 to 407   AAA Submitted on the opposite strand 398/407
(97 %)
6 diff
(98.6 %id)
DB445126 testis RNF32.a 6 to 342 1 to 337   tiling clone,   337/337
(100 %)
5 diff
(98.6 %id)
DB510125 testis RNF32.d 1480 to 1832 1 to 354     Submitted on the opposite strand 354/354
(100 %)
5 diff
(98.6 %id)
DB449294 testis RNF32.j 1 to 418 1 to 418   tiling clone,   418/418
(100 %)
1 diff
(99.8 %id)
DB514317 testis RNF32.d 1404 to 1832 1 to 428     Submitted on the opposite strand 428/428
(100 %)
2 diff
(99.6 %id)
DB450121 testis RNF32.a 107 to 561 1 to 452       452/452
(100 %)
7 diff
(98.5 %id)
DB515733 testis RNF32.d 1390 to 1836 1 to 449     Submitted on the opposite strand 449/451
(99 %)
13 diff
(97.2 %id)
DB459444.
matches multiple genes
testis RNF32.m 1 to 475 1 to 475 exact tiling clone, also hits gene sneychubu 475/475
(100 %)
1 diff
(99.8 %id)
DB479004 hippocampus RNF32.e 1 to 513 1 to 513   tiling clone,   513/513
(100 %)
0 diff
(100 %id)
DB547672 hippocampus RNF32.j 501 to 935 1 to 435     Submitted on the opposite strand 435/436
(99 %)
1 diff
(99.8 %id)
N34954 multiple sclerosis lesions RNF32.a 1357 to 1788 433 to 1       433/435
(99 %)
3 diff
(99.4 %id)
N44021 multiple sclerosis lesions RNF32.a 870 to 1088 1 to 219       219/226
(96 %)
1 diff
(99.6 %id)
N45525 multiple sclerosis lesions RNF32.i 1 to 517 1 to 526   tiling clone,   526/541
(97 %)
20 diff
(96.4 %id)
N48673 multiple sclerosis lesions RNF32.i 1013 to 1391 406 to 27   tiling clone, AAA   380/380
(100 %)
4 diff
(99.0 %id)
N51460 multiple sclerosis lesions RNF32.d 1354 to 1832 485 to 2       484/487
(99 %)
0 diff
(100 %id)
N53600 multiple sclerosis lesions RNF32.d 1158 to 1331 1 to 172       172/172
(100 %)
4 diff
(97.7 %id)
W86472 liver and spleen RNF32.r-u 376 to 831 456 to 1   tiling clone, fully sequenced,   456/456
(100 %)
0 diff
(100 %id)
W86549 liver and spleen RNF32.r-u 1 to 406 8 to 417 K12X tiling clone, fully sequenced,   410/417
(98 %)
8 diff
(98.1 %id)
AA009567 liver and spleen RNF32.r-u 7 to 454 1 to 453 exact fully sequenced,   453/453
(100 %)
6 diff
(98.7 %id)
AA009791 liver and spleen RNF32.r-u 424 to 831 410 to 1   fully sequenced,   410/410
(100 %)
2 diff
(99.6 %id)
AA412402   RNF32.k 226 to 633 10 to 417       408/417
(97 %)
6 diff
(98.6 %id)
AA412403   RNF32.k 667 to 1032 363 to 1   tiling clone,   363/363
(100 %)
7 diff
(98.1 %id)
AA626330   RNF32.d 1482 to 1834 362 to 8       355/362
(98 %)
0 diff
(100 %id)
AA581432 bulk tumor, colon RNF32.d 1355 to 1838 484 to 1       484/484
(100 %)
1 diff
(99.8 %id)
AA904554 pooled RNF32.j 545 to 904 363 to 4       360/363
(99 %)
0 diff
(100 %id)
AA968469 pooled RNF32.s 1 to 483 482 to 2 D12I K14N P15R P16R P17R ... tiling clone,   481/482
(99 %)
1 diff
(99.8 %id)
AI024391   RNF32.j 491 to 912 424 to 3       422/424
(99 %)
0 diff
(100 %id)
AI190316   RNF32.d 1388 to 1844 457 to 1   tiling clone,   457/457
(100 %)
0 diff
(100 %id)
AI217423 pooled RNF32.o 1 to 391 395 to 4 F60I F61L E62* tiling clone,   392/395
(99 %)
1 diff
(99.8 %id)
AI425010 pooled RNF32.g 891 to 1342 454 to 3       452/454
(99 %)
0 diff
(100 %id)
AI472192 pooled RNF32.d 1372 to 1838 482 to 16   AAA   467/467
(100 %)
0 diff
(100 %id)
AI699962 pooled germ cell tumors RNF32.j 670 to 935 290 to 23   AAA   268/268
(100 %)
3 diff
(98.9 %id)
AI970328 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) RNF32.j 519 to 815 297 to 1       297/297
(100 %)
4 diff
(98.7 %id)
AW072383 pooled RNF32.g 446 to 901 462 to 7       456/462
(98 %)
0 diff
(100 %id)
AW301010 colon, moderately differentiated adenocarcinoma RNF32.d 1409 to 1838 449 to 20   AAA   430/430
(100 %)
1 diff
(99.8 %id)
AW296404   RNF32.d 1502 to 1816 336 to 21       316/337
(93 %)
0 diff
(100 %id)
AW269590 pooled RNF32.j 822 to 1097 276 to 1       276/276
(100 %)
5 diff
(98.2 %id)
AW510671 pooled RNF32.n 1 to 460 465 to 5 exact tiling clone,   461/465
(99 %)
0 diff
(100 %id)
AW341694 pooled RNF32.d 1387 to 1842 457 to 1       457/457
(100 %)
6 diff
(98.7 %id)
AW665547 pooled RNF32.f 647 to 1146 500 to 1   tiling clone,   500/500
(100 %)
2 diff
(99.6 %id)
AW779156 pooled RNF32.d 1548 to 1844 302 to 3       300/302
(99 %)
0 diff
(100 %id)
BF508748   RNF32.j 585 to 1192 625 to 18   tiling clone, AAA   608/628
(96 %)
1 diff
(99.9 %id)
BF508016   RNF32.j 292 to 775 1 to 484 G145R   Submitted on the opposite strand 484/484
(100 %)
6 diff
(98.8 %id)
BE503002 carcinoid, lung RNF32.d 1334 to 1838 505 to 1       505/505
(100 %)
0 diff
(100 %id)
BF980783 duodenal adenocarcinoma, cell line, small intestine RNF32.g 1 to 770 1 to 773       773/1101
(70 %)
18 diff
(98.4 %id)
BG717434 testis RNF32.a 53 to 834 1 to 781       781/781
(100 %)
9 diff
(98.9 %id)
BG717871 testis RNF32.k 1 to 744 1 to 740   tiling clone,   740/740
(100 %)
15 diff
(98.0 %id)
BG772012 testis RNF32.f 1 to 850 1 to 840   tiling clone,   840/858
(97 %)
17 diff
(98.1 %id)
BG772014 testis RNF32.h 1 to 793 7 to 801 D12G N171E Q172P Y173V Q174S ... tiling clone,   795/804
(98 %)
15 diff
(98.2 %id)
BC028120 Brain, adult medulla RNF32.d 3 to 1832 1 to 1828 K223N F224S F225L E226K K228S ... tiling clone, available from MGC, AAA   1828/1828
(100 %)
2 diff
(99.9 %id)
BI829887 brain, medulla RNF32.d 1 to 730 1 to 733   tiling clone, available from MGC,   733/733
(100 %)
8 diff
(99.0 %id)
BI829402 brain, medulla RNF32.a 369 to 1088 1 to 723       723/743
(97 %)
14 diff
(98.2 %id)
BI460257 testis RNF32.a 1 to 670 1 to 668   tiling clone,   668/669
(99 %)
8 diff
(98.9 %id)
BI465216 testis RNF32.a 78 to 830 12 to 766       755/766
(98 %)
27 diff
(96.5 %id)
BI461139 testis RNF32.a 50 to 856 1 to 812       812/813
(99 %)
22 diff
(97.3 %id)
BI561658 testis RNF32.a 49 to 890 1 to 853       853/864
(98 %)
32 diff
(96.3 %id)
CX752064 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass RNF32.l-u 1 to 525 524 to 1   tiling clone,   524/711
(73 %)
24 diff
(96.7 %id)
TI_57176470   RNF32.d 1 to 730 67 to 799       733/799
(91 %)
14 diff
(98.3 %id)
TI_57176842   RNF32.a 369 to 1088 69 to 791       723/811
(89 %)
20 diff
(97.6 %id)
TI_44350623   RNF32.a 54 to 890 132 to 979       848/990
(85 %)
33 diff
(96.7 %id)
NM_030936.2   RNF32.a 54 to 1793 1 to 1740 exact RefSeq, AAA   1740/1740
(100 %)
0 diff
(100 %id)
NM_001184996.1   RNF32.b 1 to 1892 2 to 1893 exact RefSeq, AAA   1893/1893
(100 %)
0 diff
(100 %id)
NM_001184997.1   RNF32.c 65 to 1816 1 to 1752 exact RefSeq,   1752/1752
(100 %)
0 diff
(100 %id)
TI_1948100944   RNF32.g 81 to 412 124 to 455   fully sequenced,   332/353
(94 %)
6 diff
(98.4 %id)
TI_1948100945   RNF32.g 382 to 795 539 to 126   fully sequenced,   414/539
(76 %)
0 diff
(100 %id)
TI_1948101100   RNF32.g 101 to 795 826 to 123       704/1326
(53 %)
31 diff
(97.7 %id)
TI_1948101248   RNF32.a 386 to 911 692 to 159       534/1426
(37 %)
24 diff
(98.4 %id)
TI_1948101385   RNF32.g 119 to 795 794 to 111       684/1247
(54 %)
47 diff
(96.3 %id)
TI_1948101582   RNF32.a 228 to 1010 117 to 902   fully sequenced,   786/902
(87 %)
18 diff
(98.1 %id)
TI_1948101583   RNF32.a 622 to 1006 505 to 122   fully sequenced,   384/505
(76 %)
1 diff
(99.9 %id)
TI_1948101747   RNF32.a 355 to 1006 789 to 130       660/1371
(48 %)
32 diff
(97.7 %id)
TI_1948101915   RNF32.a 228 to 445 121 to 338   fully sequenced,   218/238
(91 %)
6 diff
(97.5 %id)
TI_1948101916   RNF32.a 415 to 1006 719 to 124   fully sequenced,   596/719
(82 %)
11 diff
(98.5 %id)
TI_1948102085   RNF32.a 228 to 1004 123 to 905   fully sequenced,   783/905
(86 %)
20 diff
(97.8 %id)
TI_1948102086   RNF32.a 622 to 1006 505 to 122   fully sequenced,   384/505
(76 %)
1 diff
(99.9 %id)
DB027542 testis RNF32.f 26 to 571 2 to 547   tiling clone, capped   546/546
(100 %)
0 diff
(100 %id)
DB032716 testis RNF32.q 1 to 545 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DB036207 testis RNF32.a 121 to 670 2 to 551   capped   550/550
(100 %)
2 diff
(99.7 %id)
DB095317 testis RNF32.p 498 to 1054 2 to 558   tiling clone, capped   557/557
(100 %)
0 diff
(100 %id)
DB198291 trachea RNF32.b 1 to 572 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DB348211 trachea RNF32.b 1327 to 1892 566 to 1   tiling clone,   566/566
(100 %)
0 diff
(100 %id)
AW967960   RNF32.a 415 to 1006 719 to 124     This clone was ignored 596/719
(82 %)
11 diff
(98.5 %id)
AY251165 testis RNF32.a 228 to 1004 123 to 905     Suspected internal deletion, this clone was ignored 783/905
(86 %)
20 diff
(97.8 %id)
R60654 whole brain RNF32.a 622 to 1006 505 to 122     This clone was ignored 384/505
(76 %)
1 diff
(99.9 %id)
R60655 whole brain RNF32.f 26 to 571 2 to 547   tiling clone, This clone was ignored 546/546
(100 %)
0 diff
(100 %id)
BG399940 Kidney RNF32.q 1 to 545 2 to 546     Submitted on the opposite strand 545/545
(100 %)
0 diff
(100 %id)
DB067470 testis RNF32.a 121 to 670 2 to 551   capped   550/550
(100 %)
2 diff
(99.7 %id)
DB339842 testis RNF32.p 498 to 1054 2 to 558   tiling clone,   557/557
(100 %)
0 diff
(100 %id)
DB198291 trachea RNF32.b 1 to 572 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DB348211 trachea RNF32.b 1327 to 1892 566 to 1   tiling clone,   566/566
(100 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l-u, .m, .n, .o, .p, .q, .r-u, .s, .t-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI