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Gene RNF139TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
278 supporting clones for gene RNF139 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AW371166 breast .a 1 to 295 1 to 299   tiling clone,   299/299
(100 %)
7 diff
(97.7 %id)
CX752063 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 63 to 740 673 to 1   tiling clone,   673/811
(82 %)
6 diff
(99.3 %id)
DA727149   .a 463 to 923 2 to 465   capped   464/464
(100 %)
4 diff
(99.2 %id)
DA656098   .a 466 to 923 2 to 459   tiling clone, capped   458/458
(100 %)
0 diff
(100 %id)
DB100109 testis .a 489 to 1062 2 to 575   capped   574/574
(100 %)
4 diff
(99.4 %id)
DA436339 tongue, tumor tissue .a 494 to 1064 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
DB091220 testis .a 746 to 1247 2 to 503   capped   502/502
(100 %)
2 diff
(99.7 %id)
DB457944 testis .a 875 to 1371 1 to 497       497/497
(100 %)
2 diff
(99.6 %id)
DA492865 brain .a 899 to 1460 2 to 572   capped   571/573
(99 %)
8 diff
(98.7 %id)
DA719615   .a 899 to 1323 2 to 426   capped   425/425
(100 %)
1 diff
(99.8 %id)
DA116477 cerebellum .a 901 to 1469 2 to 570   tiling clone, capped   569/569
(100 %)
0 diff
(100 %id)
DA554955   .a 905 to 1466 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
BI461668 testis .a 908 to 1458 1 to 564       564/890
(63 %)
34 diff
(96.2 %id)
DA178165 amygdala .a 923 to 1202 2 to 284   capped   283/283
(100 %)
4 diff
(98.6 %id)
DA700992   .a 928 to 1400 2 to 474   capped   473/473
(100 %)
0 diff
(100 %id)
DA020080   .a 930 to 1472 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA388305 thalamus .a 931 to 1523 2 to 598   capped   597/597
(100 %)
4 diff
(99.4 %id)
DA793069 brain .a 932 to 1352 2 to 425   capped   424/424
(100 %)
1 diff
(99.8 %id)
TI_44349405   .a 935 to 1476 77 to 632       556/980
(56 %)
14 diff
(98.6 %id)
TI_44349809   .a 935 to 1483 104 to 661       558/815
(68 %)
6 diff
(99.3 %id)
BI560998 testis .a 936 to 1476 1 to 555       555/903
(61 %)
13 diff
(98.6 %id)
BI562207 testis .a 936 to 1483 1 to 557       557/711
(78 %)
16 diff
(97.8 %id)
DA455269 tongue, tumor tissue .a 937 to 1505 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB454308 testis .a 941 to 1410 1 to 470       470/470
(100 %)
0 diff
(100 %id)
DB451491 testis .a 943 to 1432 1 to 493       493/493
(100 %)
2 diff
(99.6 %id)
DB456023 testis .a 947 to 1433 1 to 490       490/490
(100 %)
4 diff
(99.2 %id)
AW408570 lymph .a 948 to 1173 8 to 233       226/233
(96 %)
6 diff
(97.5 %id)
TI_154148422   .a 948 to 1484 79 to 613       535/565
(94 %)
24 diff
(95.8 %id)
BG773296 testis .a 955 to 1437 1 to 501       501/677
(74 %)
24 diff
(96.5 %id)
BI562637 testis .a 957 to 1675 1 to 726       726/726
(100 %)
20 diff
(97.3 %id)
DA674861   .a 959 to 1548 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA691281   .a 959 to 1515 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DB454836 testis .a 960 to 1423 1 to 464       464/464
(100 %)
0 diff
(100 %id)
TI_44351053   .a 960 to 1675 122 to 842       721/842
(85 %)
12 diff
(98.6 %id)
NM_007218.3   .a 960 to 4271 1 to 3312 exact RefSeq,   3312/3312
(100 %)
0 diff
(100 %id)
DA381454 thalamus .a 961 to 1590 2 to 631   capped   630/630
(100 %)
1 diff
(99.9 %id)
DA788213 brain .a 961 to 1293 2 to 335   capped   334/334
(100 %)
1 diff
(99.8 %id)
CD171728 testis .a 963 to 1814 29 to 885       857/887
(96 %)
18 diff
(98.0 %id)
DB462319 testis .a 965 to 1435 1 to 475       475/476
(99 %)
4 diff
(99.2 %id)
DA737131   .a 975 to 1795 2 to 811   capped   810/810
(100 %)
13 diff
(98.4 %id)
DB122257 thymus .a 995 to 1485 2 to 494   capped   493/503
(98 %)
3 diff
(99.5 %id)
DA929812 small intestine .a 1024 to 1554 2 to 533   capped   532/532
(100 %)
1 diff
(99.9 %id)
BM458530 lymph, lymphoma, cell line .a 1041 to 1941 1 to 908       908/1166
(77 %)
44 diff
(96.3 %id)
DB121586 thymus .a 1042 to 1504 2 to 468   capped   467/468
(99 %)
7 diff
(98.6 %id)
DA274135 corpus callosum .a 1058 to 1468 2 to 412   capped   411/411
(100 %)
1 diff
(99.8 %id)
DA395099 thalamus .a 1058 to 1581 2 to 526   capped   525/525
(100 %)
2 diff
(99.7 %id)
DA032270   .a 1060 to 1555 2 to 498   capped   497/497
(100 %)
1 diff
(99.8 %id)
DA429893 colon .a 1060 to 1532 2 to 478   capped   477/477
(100 %)
6 diff
(98.8 %id)
DA524160 brain .a 1060 to 1317 2 to 259   capped   258/258
(100 %)
0 diff
(100 %id)
AF064801   .a 1066 to 3551 1 to 2486 V18I AAA   2486/2486
(100 %)
2 diff
(100.0 %id)
DA553606   .a 1067 to 1589 2 to 530   capped   529/529
(100 %)
4 diff
(99.3 %id)
CB960643 Human Placenta, placenta .a 1068 to 1736 22 to 702       681/813
(83 %)
21 diff
(97.5 %id)
BM548147 brain, hippocampus .a 1071 to 1704 74 to 717       644/1340
(48 %)
22 diff
(98.4 %id)
DB504223 hypothalamus .a 1074 to 1558 1 to 488       488/488
(100 %)
1 diff
(99.8 %id)
DA593154 lung .a 1074 to 1416 2 to 344   capped   343/343
(100 %)
0 diff
(100 %id)
DB506702 hypothalamus .a 1080 to 1543 1 to 465       465/466
(99 %)
4 diff
(99.2 %id)
DB115847 thymus .a 1080 to 1582 2 to 504   capped   503/503
(100 %)
0 diff
(100 %id)
CB989641 Human Placenta, placenta .a 1081 to 1682 24 to 630       607/847
(71 %)
21 diff
(97.6 %id)
CN409089 embryonic stem cells, cell lines H1, H7, andH9 .a 1084 to 1724 1 to 640       640/640
(100 %)
6 diff
(99.1 %id)
BM450327 eye, retinoblastoma .a 1085 to 1603 10 to 537       528/1402
(37 %)
22 diff
(98.5 %id)
BC021571 Lung, large cell carcinoma .a 1089 to 3551 1 to 2463 exact available from MGC, AAA   2463/2463
(100 %)
1 diff
(100.0 %id)
BC064636 Pancreas, Spleen, adult pooled .a 1093 to 3559 1 to 2467 exact tiling clone, available from MGC, AAA   2467/2467
(100 %)
0 diff
(100 %id)
BM919013 pooled pancreas and spleen .a 1093 to 2060 9 to 985       977/1037
(94 %)
66 diff
(93.7 %id)
CR974601 T-Lymphocytes .a 1094 to 1724 1 to 631       631/634
(99 %)
1 diff
(99.9 %id)
CR983831 T-Lymphocytes .a 1097 to 1600 1 to 504       504/505
(99 %)
1 diff
(99.9 %id)
BQ723116 sympathetic trunk .a 1100 to 1699 4 to 606       603/942
(64 %)
18 diff
(98.1 %id)
BM905405 embryonal carcinoma, cell line, testis .a 1105 to 1787 79 to 766       688/1120
(61 %)
22 diff
(98.1 %id)
BQ424329 eye, retinoblastoma .a 1107 to 1807 1 to 704       704/903
(77 %)
16 diff
(98.3 %id)
BQ717364 sympathetic trunk .a 1118 to 1774 1 to 660       660/922
(71 %)
6 diff
(99.4 %id)
CA396686 eye, RPE/choroid .a 1123 to 1421 1 to 299       299/299
(100 %)
3 diff
(99.0 %id)
BM804626 lymph, lymphoma, cell line .a 1133 to 1723 1 to 592       592/1113
(53 %)
11 diff
(99.1 %id)
DN992561 brain, whole brain .a 1201 to 1834 21 to 654       634/654
(96 %)
6 diff
(99.1 %id)
DA788806 brain .a 1251 to 1826 2 to 582   capped   581/581
(100 %)
10 diff
(98.3 %id)
AK001602   .a 1257 to 3551 1 to 2295 exact available from FLJ,   2295/2295
(100 %)
2 diff
(100.0 %id)
AU130820   .a 1258 to 2055 2 to 804   capped   803/809
(99 %)
8 diff
(99.1 %id)
DA006353   .a 1278 to 1838 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA470920   .a 1278 to 1845 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA575534   .a 1278 to 1856 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DB124464 thymus .a 1278 to 1823 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA576563   .a 1280 to 1838 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
BP231451 muscle .a 1281 to 1862 1 to 582       582/582
(100 %)
0 diff
(100 %id)
AL529504 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 1282 to 2344 1 to 1047       1047/1097
(95 %)
19 diff
(98.3 %id)
DA927569 small intestine .a 1282 to 1875 2 to 596   capped   595/595
(100 %)
2 diff
(99.7 %id)
DB125385 thymus .a 1284 to 1841 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA622368 Kidney .a 1296 to 1833 2 to 539   capped   538/538
(100 %)
1 diff
(99.9 %id)
TI_1948242363   .a 1302 to 2310 138 to 1140       1003/1375
(72 %)
37 diff
(97.4 %id)
TI_1948242364   .a 1302 to 2154 136 to 985       850/1355
(62 %)
18 diff
(98.7 %id)
TI_1948242638   .a 1302 to 2404 135 to 1232       1098/1395
(78 %)
56 diff
(96.0 %id)
TI_1948242639   .a 1302 to 2180 135 to 1017       883/1419
(62 %)
38 diff
(97.4 %id)
TI_1948242923   .a 1302 to 2296 137 to 1125       989/1352
(73 %)
31 diff
(97.8 %id)
TI_1948242924   .a 1302 to 2259 131 to 1080       950/1364
(69 %)
46 diff
(96.7 %id)
TI_1948243212   .a 1302 to 2384 138 to 1231       1094/1410
(77 %)
55 diff
(96.1 %id)
TI_1948243213   .a 1302 to 2259 134 to 1087       954/1391
(68 %)
52 diff
(96.3 %id)
EL733580 mixed .a 1303 to 1944 1 to 642       642/642
(100 %)
0 diff
(100 %id)
CN409090 embryonic stem cells, DMSO-treated H9 cellline .a 1388 to 1729 30 to 371       366/371
(98 %)
1 diff
(99.8 %id)
BE870204 adenocarcinoma, colon .a 1412 to 2080 1 to 664       664/853
(77 %)
12 diff
(98.6 %id)
DA057442 cerebellum .a 1418 to 1969 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA872555 Prostate .a 1418 to 1955 2 to 539   capped   538/538
(100 %)
1 diff
(99.9 %id)
DA650134   .a 1422 to 1957 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
DA609787   .a 1423 to 2005 2 to 583   capped   582/583
(99 %)
4 diff
(99.4 %id)
DA288738 hippocampus .a 1425 to 1970 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
AW594213 pooled germ cell tumors .a 1426 to 1886 462 to 1       462/462
(100 %)
1 diff
(99.8 %id)
DB519751 testis .a 1450 to 1890 1 to 441     Submitted on the opposite strand 441/441
(100 %)
0 diff
(100 %id)
AA812811   .a 1452 to 1887 441 to 5       437/441
(99 %)
3 diff
(99.4 %id)
DB115153 thymus .a 1454 to 2012 2 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
DB048653 testis .a 1472 to 2040 6 to 579   capped   574/578
(99 %)
6 diff
(99.0 %id)
DA626014 Kidney .a 1491 to 2034 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DB028903 testis .a 1509 to 2054 2 to 548   capped   547/547
(100 %)
2 diff
(99.7 %id)
AL041426 testis .a 1512 to 1839 1 to 328       328/328
(100 %)
1 diff
(99.7 %id)
BM741346 stomach .a 1513 to 1989 1 to 474       474/474
(100 %)
9 diff
(98.2 %id)
BM744900 stomach .a 1513 to 1990 1 to 473       473/473
(100 %)
4 diff
(99.2 %id)
BQ353310 head_neck .a 1514 to 1991 10 to 489       480/489
(98 %)
6 diff
(98.8 %id)
DA511445 brain .a 1528 to 2089 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA148152 amygdala .a 1543 to 2115 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
CN409087 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1570 to 2302 1 to 733       733/733
(100 %)
1 diff
(99.9 %id)
DB249168 uterus .a 1592 to 2048 2 to 459   capped   458/458
(100 %)
1 diff
(99.8 %id)
DA585452 lung .a 1594 to 2132 2 to 540   capped   539/539
(100 %)
4 diff
(99.3 %id)
BP238781 Liver .a 1596 to 2173 1 to 578       578/578
(100 %)
5 diff
(99.2 %id)
DB057655 testis .a 1602 to 2136 2 to 536   capped   535/535
(100 %)
2 diff
(99.7 %id)
DB175371 kidney, tumor tissue .a 1607 to 2169 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DA385661 thalamus .a 1616 to 2212 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
DA149263 amygdala .a 1617 to 2187 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA089634 cerebellum .a 1618 to 2174 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
BP258477 heart .a 1724 to 2285 1 to 562       562/564
(99 %)
7 diff
(98.8 %id)
AK025043 colon .a 1751 to 3551 1 to 1801   available from FLJ, AAA   1801/1801
(100 %)
1 diff
(100.0 %id)
DA822216 pericardium .a 1756 to 2130 2 to 377   capped   376/376
(100 %)
2 diff
(99.5 %id)
BP276444 Kidney .a 1766 to 2346 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
BE881085 large cell carcinoma, undifferentiated, lung .a 1799 to 2551 1 to 746       746/927
(80 %)
19 diff
(98.0 %id)
CX873256 embryonic stem .a 1840 to 2552 1 to 713       713/713
(100 %)
1 diff
(99.9 %id)
BP267323 thyroid .a 1857 to 2437 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
BP267931 thyroid .a 1857 to 2436 1 to 579       579/579
(100 %)
2 diff
(99.7 %id)
AK098519 testis .a 1886 to 3551 1 to 1666   available from FLJ,   1666/1666
(100 %)
1 diff
(100.0 %id)
CR622053 fetal brain .a 1915 to 3516 1 to 1602       1602/1602
(100 %)
0 diff
(100 %id)
AL539090 brain, fetal brain .a 1915 to 2874 1 to 947   fully sequenced,   947/947
(100 %)
8 diff
(99.2 %id)
BG505335 embryonal carcinoma, testis .a 1936 to 2613 1 to 682       682/687
(99 %)
6 diff
(99.2 %id)
BQ890217 dorsal root ganglia .a 1941 to 2727 1 to 795       795/952
(83 %)
45 diff
(95.3 %id)
BG611514 adenocarcinoma, Prostate .a 1945 to 2732 1 to 790       790/800
(98 %)
26 diff
(96.8 %id)
BM907896 large cell carcinoma, lung .a 1951 to 2728 1 to 784       784/1038
(75 %)
12 diff
(98.9 %id)
AL110327 brain .a 1953 to 2451 1 to 498       498/498
(100 %)
3 diff
(99.4 %id)
EB388302 eye, optic nerve .a 1981 to 2829 1 to 849       849/849
(100 %)
6 diff
(99.3 %id)
BP298675   .a 1989 to 2556 1 to 569       569/580
(98 %)
4 diff
(99.4 %id)
BX119590 whole brain .a 2027 to 2569 1 to 541       541/541
(100 %)
2 diff
(99.7 %id)
Z45906 brain, total brain .a 2027 to 2357 1 to 330       330/330
(100 %)
1 diff
(99.7 %id)
H08912 whole brain .a 2028 to 2435 1 to 415       415/419
(99 %)
9 diff
(97.9 %id)
FN077428 breast carcinoma .a 2036 to 2139 105 to 1     Submitted on the opposite strand 105/105
(100 %)
1 diff
(99.1 %id)
BF215347 bone marrow, from acute myelogenous leukemia .a 2051 to 2586 1 to 541       541/739
(73 %)
23 diff
(96.9 %id)
CR614013 placenta .a 2063 to 3518 1 to 1456       1456/1456
(100 %)
0 diff
(100 %id)
AL541293 placenta .a 2063 to 3065 1 to 999       999/999
(100 %)
7 diff
(99.3 %id)
BX445655 placenta .a 2063 to 2859 1 to 797       797/797
(100 %)
2 diff
(99.8 %id)
BG430138 Kidney .a 2074 to 2913 1 to 831       831/843
(98 %)
26 diff
(97.0 %id)
BF695043 muscle (skeletal) .a 2078 to 2729 1 to 642       642/723
(88 %)
27 diff
(96.3 %id)
AA164393.
matches multiple genes
  .a 2122 to 2451 1 to 334     also hits gene C3orf59 334/335
(99 %)
5 diff
(98.6 %id)
FN048907 breast carcinoma .a 2128 to 2227 1 to 100       100/100
(100 %)
0 diff
(100 %id)
BX643003   .a 2148 to 2555 13 to 420       408/420
(97 %)
6 diff
(98.6 %id)
AI028768   .a 2162 to 2581 429 to 5       425/429
(99 %)
10 diff
(97.7 %id)
BG432950 Kidney .a 2179 to 2999 1 to 831       831/832
(99 %)
29 diff
(96.6 %id)
TI_1948242640   .a 2185 to 3301 1236 to 123       1114/1255
(88 %)
0 diff
(100 %id)
BE873868 large cell carcinoma, undifferentiated, lung .a 2204 to 2946 1 to 729       729/809
(90 %)
22 diff
(97.3 %id)
AI267715 brain, frontal lobe (see description) .a 2209 to 2604 31 to 426       396/426
(92 %)
6 diff
(98.6 %id)
BU561153 testis .a 2215 to 2925 1 to 722       722/725
(99 %)
21 diff
(97.2 %id)
BF977535 melanotic melanoma, high MDR, skin .a 2216 to 2859 1 to 639       639/832
(76 %)
17 diff
(98.0 %id)
BF954190 nervous_normal .a 2228 to 2667 441 to 2       440/441
(99 %)
0 diff
(100 %id)
BQ432954 bone marrow, from acute myelogenous leukemia .a 2230 to 2972 1 to 752       752/771
(97 %)
14 diff
(98.2 %id)
BF961014 nervous_normal .a 2234 to 2649 8 to 424       417/424
(98 %)
6 diff
(98.6 %id)
FN115918 breast carcinoma .a 2251 to 2361 115 to 5     Submitted on the opposite strand 111/115
(96 %)
0 diff
(100 %id)
BM706011 eye, lens .a 2264 to 2717 1 to 454       454/454
(100 %)
1 diff
(99.8 %id)
TI_1948242925   .a 2288 to 3301 1120 to 122       999/1238
(80 %)
0 diff
(100 %id)
BG697374 skin .a 2343 to 3104 1 to 767       767/771
(99 %)
9 diff
(98.9 %id)
CN409088 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2391 to 2987 1 to 597       597/597
(100 %)
0 diff
(100 %id)
TI_1948242365   .a 2408 to 3301 1021 to 123       899/1274
(70 %)
0 diff
(100 %id)
TI_1948242641   .a 2418 to 3301 1004 to 119       886/1172
(75 %)
0 diff
(100 %id)
BE893653 melanotic melanoma, skin .a 2429 to 3097 1 to 667       667/838
(79 %)
12 diff
(98.6 %id)
TI_1948242926   .a 2449 to 3301 979 to 119       861/1217
(70 %)
0 diff
(100 %id)
BG622721 placenta .a 2450 to 3199 1 to 752       752/753
(99 %)
10 diff
(98.7 %id)
TI_1948243214   .a 2451 to 3301 969 to 121       849/1239
(68 %)
0 diff
(100 %id)
TI_1948243215   .a 2467 to 3301 965 to 120       846/1240
(68 %)
0 diff
(100 %id)
CN409091 embryonic stem cells, DMSO-treated H9 cellline .a 2468 to 3218 1 to 751       751/751
(100 %)
1 diff
(99.9 %id)
AL529503 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 2487 to 3531 1027 to 1       1027/1051
(97 %)
22 diff
(98.0 %id)
FN139308 breast carcinoma .a 2504 to 2600 101 to 5     Submitted on the opposite strand 97/101
(96 %)
0 diff
(100 %id)
AL568834 placenta .a 2528 to 3518 970 to 1       970/1016
(95 %)
43 diff
(95.8 %id)
TI_1948242366   .a 2528 to 3304 901 to 115       787/1223
(64 %)
50 diff
(96.0 %id)
TI_154117662   .a 2652 to 3474 946 to 127       820/1055
(77 %)
0 diff
(100 %id)
BX445654 placenta .a 2667 to 3532 866 to 1       866/866
(100 %)
6 diff
(99.4 %id)
FN104640 breast carcinoma .a 2670 to 2780 1 to 112       112/112
(100 %)
1 diff
(99.2 %id)
BF679099 Prostate .a 2704 to 3158 1 to 456       456/456
(100 %)
1 diff
(99.8 %id)
BU949368 Pancreas, Purified pancreatic islet .a 2705 to 3001 1 to 297   fully sequenced,   297/297
(100 %)
2 diff
(99.4 %id)
AL041427 testis .a 2764 to 3457 694 to 1       694/694
(100 %)
0 diff
(100 %id)
CB052496 leiomyosarcoma, soft tissue .a 2783 to 3464 10 to 691       682/691
(98 %)
6 diff
(99.2 %id)
BQ014422 Chondrosarcoma, Left Pubic Bone .a 2792 to 3551 776 to 17   AAA   760/760
(100 %)
2 diff
(99.8 %id)
AA166821   .a 2800 to 3139 1 to 337     Submitted on the opposite strand 337/337
(100 %)
8 diff
(97.7 %id)
BQ014830 Chondrosarcoma, Left Pubic Bone .a 2807 to 3551 761 to 17   AAA   745/745
(100 %)
3 diff
(99.6 %id)
BG286591 bladder, transitional cell papilloma, cell line .a 2831 to 3555 1 to 722   AAA   722/910
(79 %)
6 diff
(99.4 %id)
AI936136 normal prostate, Prostate .a 2840 to 3561 740 to 1       740/750
(98 %)
0 diff
(100 %id)
AL567659 brain, fetal brain .a 2844 to 3516 662 to 1   fully sequenced,   662/662
(100 %)
7 diff
(99.0 %id)
BF431377 Kidney .a 2875 to 3551 677 to 1       677/677
(100 %)
7 diff
(99.0 %id)
AW008063 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 2884 to 3552 670 to 1       670/670
(100 %)
14 diff
(98.0 %id)
BF430955 Kidney .a 2887 to 3555 672 to 4       669/672
(99 %)
0 diff
(100 %id)
FN106524 breast carcinoma .a 2890 to 2963 1 to 72       72/74
(97 %)
3 diff
(96.0 %id)
AW188947 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 2890 to 3549 658 to 1       658/662
(99 %)
24 diff
(96.4 %id)
BE219019 carcinoid, lung .a 2893 to 3550 658 to 1       658/658
(100 %)
3 diff
(99.6 %id)
FN071545 breast carcinoma .a 2910 to 3004 1 to 91       91/91
(100 %)
4 diff
(95.7 %id)
AI690726 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 2917 to 3551 654 to 23   AAA   632/632
(100 %)
19 diff
(97.0 %id)
AI668811 Prostate .a 2932 to 3551 620 to 1       620/620
(100 %)
0 diff
(100 %id)
FN166549 breast carcinoma .a 2934 to 3024 92 to 1     Submitted on the opposite strand 92/92
(100 %)
1 diff
(99.0 %id)
TI_57152385   .a 2935 to 3561 31 to 656   AAA   626/656
(95 %)
6 diff
(99.1 %id)
BI765465 pooled colon, kidney, stomach .a 2938 to 3561 1 to 623   AAA   623/623
(100 %)
6 diff
(99.1 %id)
AI366859 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 2962 to 3549 588 to 1       588/588
(100 %)
2 diff
(99.7 %id)
BE463565 Kidney .a 2968 to 3551 580 to 1       580/580
(100 %)
15 diff
(97.5 %id)
AA127767 uterus .a 2970 to 3056 1 to 81   fully sequenced,   81/81
(100 %)
0 diff
(100 %id)
BU949127 Pancreas, Purified pancreatic islet .a 2971 to 3551 581 to 1   fully sequenced,   581/581
(100 %)
1 diff
(99.9 %id)
BE222350 carcinoid, lung .a 2974 to 3550 577 to 1       577/577
(100 %)
1 diff
(99.9 %id)
AI417722 Prostate .a 2986 to 3551 566 to 1       566/566
(100 %)
5 diff
(99.2 %id)
AI805452 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 2989 to 3551 563 to 1       563/563
(100 %)
4 diff
(99.3 %id)
DB528120 testis .a 2992 to 3474 1 to 484     Submitted on the opposite strand 484/484
(100 %)
2 diff
(99.6 %id)
BM668934 eye, lens .a 2997 to 3551 573 to 19   AAA   555/555
(100 %)
2 diff
(99.7 %id)
DB523440 testis .a 2998 to 3471 1 to 474     Submitted on the opposite strand 474/474
(100 %)
10 diff
(97.9 %id)
AI830415 B-cell, chronic lymphotic leukemia .a 3007 to 3544 549 to 12   AAA   538/538
(100 %)
5 diff
(99.1 %id)
AU152708   .a 3007 to 3551 544 to 1       544/548
(99 %)
17 diff
(96.9 %id)
AI913514 Kidney .a 3017 to 3289 273 to 1       273/274
(99 %)
22 diff
(92.0 %id)
AA127647 uterus .a 3026 to 3551 522 to 1   fully sequenced,   522/522
(100 %)
2 diff
(99.7 %id)
AU154171   .a 3026 to 3551 524 to 1       524/524
(100 %)
4 diff
(99.3 %id)
AA781115   .a 3028 to 3553 526 to 1       526/526
(100 %)
1 diff
(99.9 %id)
DB569659 hypothalamus .a 3036 to 3551 1 to 516     Submitted on the opposite strand 516/516
(100 %)
10 diff
(98.1 %id)
FN134044 breast carcinoma .a 3049 to 3145 1 to 97       97/97
(100 %)
0 diff
(100 %id)
AA166974   .a 3052 to 3551 495 to 1     Submitted on the opposite strand 495/495
(100 %)
7 diff
(98.6 %id)
AI760219 Kidney .a 3055 to 3473 418 to 1       418/418
(100 %)
4 diff
(99.1 %id)
DB508610 testis .a 3057 to 3471 1 to 414     Submitted on the opposite strand 414/414
(100 %)
12 diff
(97.2 %id)
AW972862   .a 3070 to 3551 111 to 592   AAA   482/592
(81 %)
6 diff
(99.0 %id)
AA523685 ovary .a 3070 to 3561 9 to 503       495/542
(91 %)
11 diff
(98.0 %id)
EH325597   .a 3073 to 3155 1 to 83       83/83
(100 %)
3 diff
(96.4 %id)
FN129111 breast carcinoma .a 3080 to 3152 1 to 74       74/74
(100 %)
1 diff
(98.7 %id)
AI242440 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3081 to 3549 471 to 1       471/471
(100 %)
2 diff
(99.6 %id)
DB575470 hypothalamus .a 3083 to 3547 1 to 465     Submitted on the opposite strand 465/467
(99 %)
8 diff
(98.3 %id)
BM693442 eye, Retina Foveal and Macular .a 3090 to 3551 1 to 462   fully sequenced, AAA   462/462
(100 %)
0 diff
(100 %id)
TI_151707208   .a 3091 to 3551 551 to 91   AAA   461/1417
(32 %)
1 diff
(100.0 %id)
AW194782 Kidney .a 3093 to 3545 455 to 3       453/455
(99 %)
0 diff
(100 %id)
AW009775 colon .a 3094 to 3552 459 to 1       459/459
(100 %)
0 diff
(100 %id)
AA983689 carcinoid, lung .a 3100 to 3550 451 to 1       451/451
(100 %)
2 diff
(99.6 %id)
DB527756 testis .a 3101 to 3551 1 to 451     Submitted on the opposite strand 451/451
(100 %)
1 diff
(99.8 %id)
H08828 whole brain .a 3101 to 3551 476 to 12   AAA   465/471
(98 %)
19 diff
(96.0 %id)
DB520245 testis .a 3103 to 3551 1 to 450     Submitted on the opposite strand 450/450
(100 %)
8 diff
(98.3 %id)
DB532525 hippocampus .a 3109 to 3479 34 to 407     Submitted on the opposite strand 374/407
(91 %)
6 diff
(98.6 %id)
AI582846 anaplastic oligodendroglioma, brain .a 3115 to 3552 438 to 1       438/438
(100 %)
3 diff
(99.4 %id)
BQ027979 mixed .a 3120 to 3545 30 to 454     Submitted on the opposite strand 425/462
(91 %)
1 diff
(99.8 %id)
BG622834 placenta .a 3124 to 3473 1 to 353       353/1141
(30 %)
7 diff
(99.4 %id)
AW900020 nervous_normal .a 3127 to 3534 3 to 409       407/409
(99 %)
6 diff
(98.6 %id)
AJ708536 heart .a 3128 to 3559 1 to 432   AAA   432/432
(100 %)
0 diff
(100 %id)
AI218688   .a 3139 to 3551 440 to 28   AAA   413/413
(100 %)
0 diff
(100 %id)
CB121208 Liver .a 3139 to 3561 425 to 3     Submitted on the opposite strand 423/425
(99 %)
0 diff
(100 %id)
AI973279 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 3146 to 3554 409 to 1       409/411
(99 %)
0 diff
(100 %id)
AI568791 Prostate .a 3147 to 3551 426 to 22   AAA   405/405
(100 %)
2 diff
(99.6 %id)
AI802271 adenocarcinoma, Pancreas .a 3158 to 3551 394 to 1       394/394
(100 %)
0 diff
(100 %id)
AI362010 brain, glioblastoma (pooled) .a 3169 to 3549 381 to 1       381/381
(100 %)
0 diff
(100 %id)
AW051564 pooled .a 3169 to 3550 384 to 1       384/570
(67 %)
13 diff
(97.8 %id)
BE698505 uterus_tumor .a 3172 to 3272 108 to 9       100/108
(92 %)
0 diff
(100 %id)
AI307275 2 pooled tumors (clear cell type), Kidney .a 3175 to 3642 471 to 4       468/471
(99 %)
0 diff
(100 %id)
FN175521 breast carcinoma .a 3180 to 3234 1 to 55       55/62
(88 %)
2 diff
(96.8 %id)
BJ997267 hepatoblastoma .a 3180 to 3640 480 to 20   AAA   461/461
(100 %)
1 diff
(99.8 %id)
AA838136 ovary .a 3190 to 3551 1 to 360   AAA   360/360
(100 %)
4 diff
(98.9 %id)
CA313073 Human Lung Epithelial cells, lung .a 3196 to 3551 372 to 17   AAA   356/361
(98 %)
1 diff
(99.8 %id)
FN097439 breast carcinoma .a 3205 to 3284 1 to 80       80/80
(100 %)
0 diff
(100 %id)
AI308198 2 pooled tumors (clear cell type), Kidney .a 3206 to 3640 450 to 16   AAA   435/435
(100 %)
0 diff
(100 %id)
FN112723 breast carcinoma .a 3217 to 3301 86 to 1     Submitted on the opposite strand 86/86
(100 %)
1 diff
(98.9 %id)
FN119713 breast carcinoma .a 3224 to 3312 1 to 87       87/87
(100 %)
4 diff
(95.5 %id)
AW900050 nervous_normal .a 3227 to 3544 10 to 328       319/332
(96 %)
23 diff
(93.1 %id)
Z41531 brain, total brain .a 3238 to 3548 311 to 1       311/311
(100 %)
0 diff
(100 %id)
AA558801 breast .a 3260 to 3551 292 to 1       292/292
(100 %)
0 diff
(100 %id)
Z24965 leg muscle, skeletal muscle .a 3269 to 3555 1 to 287       287/290
(98 %)
2 diff
(99.4 %id)
FN057555 breast carcinoma .a 3284 to 3383 1 to 103       103/104
(99 %)
5 diff
(95.2 %id)
F00448 leg muscle, skeletal muscle .a 3294 to 3536 243 to 1       243/243
(100 %)
0 diff
(100 %id)
BM668717 eye, Retina Foveal and Macular .a 3305 to 3551 263 to 17   fully sequenced, AAA   247/247
(100 %)
0 diff
(100 %id)
FN118549 breast carcinoma .a 3318 to 3413 98 to 1     Submitted on the opposite strand 98/98
(100 %)
2 diff
(98.0 %id)
EC581657 Prostate .a 3331 to 3434 1 to 102       102/104
(98 %)
3 diff
(97.2 %id)
AA829134 ovary .a 3335 to 3604 1 to 270       270/270
(100 %)
2 diff
(99.3 %id)
FN072378 breast carcinoma .a 3341 to 3417 80 to 1     Submitted on the opposite strand 80/81
(98 %)
1 diff
(98.8 %id)
FN174204 breast carcinoma .a 3348 to 3450 102 to 1     Submitted on the opposite strand 102/102
(100 %)
1 diff
(99.1 %id)
R66952 placenta .a 3349 to 3641 300 to 7       294/301
(97 %)
0 diff
(100 %id)
AA455970 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3393 to 3740 353 to 6       348/353
(98 %)
0 diff
(100 %id)
AA876989 metastatic prostate bone lesion .a 3479 to 3746 272 to 5       268/272
(98 %)
0 diff
(100 %id)
BE328433 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .a 3501 to 4010 510 to 1   tiling clone,   510/510
(100 %)
1 diff
(99.9 %id)
AI221978 pooled .a 3567 to 3915 350 to 2       349/350
(99 %)
0 diff
(100 %id)
BM723002 eye, fetal eye .a 3598 to 4271 1 to 676   tiling clone,   676/676
(100 %)
4 diff
(99.5 %id)
AI480084 Kidney .a 3652 to 3917 266 to 1       266/266
(100 %)
0 diff
(100 %id)
DA764440 tongue .b-u 1 to 571 2 to 572   tiling clone, capped   571/571
(100 %)
0 diff
(100 %id)
DB325418 tongue .b-u 2029 to 2595 567 to 1   tiling clone,   567/567
(100 %)
1 diff
(99.9 %id)
AI685300 pooled .c 1 to 467 471 to 5 exact tiling clone,   467/471
(99 %)
0 diff
(100 %id)
BM746986 stomach Gene RNF139, variant not shown         Suspected internal deletion, this clone was ignored    
DA030102   Gene RNF139, variant not shown       capped Suspected internal deletion, this clone was ignored    
AI339360 pooled germ cell tumors Gene RNF139, variant not shown         Suspected internal deletion, this clone was ignored    
DB097323 testis Gene RNF139, variant not shown         This clone was ignored    
DB341827 testis Gene RNF139, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b-u, .c Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI