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Gene RNASELTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
92 supporting clones for gene RNASEL back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA010978 adrenal gland .a 1 to 551 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
DA011856 adrenal gland .a 1 to 578 2 to 580   tiling clone, capped   579/579
(100 %)
3 diff
(99.5 %id)
DB067701 testis .a 1 to 505 2 to 507   capped   506/506
(100 %)
3 diff
(99.5 %id)
BU940316 mixed (pool of 40 RNAs) .a 26 to 786 1 to 765       765/765
(100 %)
10 diff
(98.7 %id)
DA127960 cerebellum .a 27 to 621 2 to 596   capped   595/595
(100 %)
1 diff
(99.9 %id)
BX502854 Liver .a 28 to 684 1 to 657       657/657
(100 %)
3 diff
(99.6 %id)
BP244709 Kidney .a 29 to 610 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BP245362 Kidney .a 29 to 611 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BP335764 coronary artery .a 29 to 610 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP336508 coronary artery .a 29 to 634 1 to 608       608/608
(100 %)
4 diff
(99.4 %id)
DA224507 brain .a 30 to 572 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DR005798 Prostate .a 39 to 704 1 to 665   tiling clone,   665/665
(100 %)
6 diff
(99.1 %id)
TI_154156417   .a 41 to 652 79 to 691       613/614
(99 %)
38 diff
(93.9 %id)
AK315231 trachea .a 75 to 2508 1 to 2435 H64R R462Q D541E M644N N645E ...     2435/2435
(100 %)
5 diff
(99.8 %id)
DB239743 trachea .a 76 to 665 2 to 591   capped   590/590
(100 %)
2 diff
(99.7 %id)
NM_021133.2   .a 116 to 4263 1 to 4148 exact RefSeq, AAA   4148/4148
(100 %)
0 diff
(100 %id)
BC114433 PCR rescued clones .a 160 to 3422 1 to 3263 exact tiling clone,   3263/3263
(100 %)
1 diff
(100.0 %id)
BC115697 PCR rescued clones .a 160 to 3422 1 to 3263 R462Q D541E     3263/3263
(100 %)
2 diff
(100.0 %id)
DA863359 placenta .a 500 to 1139 2 to 641   capped   640/640
(100 %)
0 diff
(100 %id)
CU446173 epidermis .a 569 to 1249 693 to 13     Submitted on the opposite strand 681/693
(98 %)
0 diff
(100 %id)
BP219639 caudate nucleus .a 650 to 1073 1 to 424       424/424
(100 %)
3 diff
(99.3 %id)
BF872173 lung_tumor .a 711 to 856 9 to 151       143/151
(94 %)
5 diff
(96.7 %id)
BQ216121 embryonal carcinoma, cell line, testis .a 730 to 1534 1 to 809       809/819
(98 %)
7 diff
(99.2 %id)
CF137479 lymph .a 947 to 1391 1 to 445       445/445
(100 %)
6 diff
(98.7 %id)
TI_154166931   .a 954 to 1420 81 to 547       467/468
(99 %)
2 diff
(99.6 %id)
AI834245 head_neck .a 1743 to 2053 1 to 311       311/318
(97 %)
5 diff
(98.5 %id)
BG900363 cartilage .a 2015 to 2330 81 to 396       316/331
(95 %)
12 diff
(96.4 %id)
BQ213068 melanotic melanoma, skin .a 2039 to 2823 12 to 810       799/879
(90 %)
29 diff
(96.8 %id)
GD136994   .a 2053 to 2219 7 to 173       168/174
(96 %)
10 diff
(94.3 %id)
AA291111 germinal center B cell .a 2185 to 2317 136 to 1     Submitted on the opposite strand 136/136
(100 %)
3 diff
(97.8 %id)
DA919376 small intestine .a 2213 to 2788 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
BX280477 cervical carcinoma cell line, cervix .a 2426 to 2904 1 to 479       479/479
(100 %)
0 diff
(100 %id)
BI259008 cervical carcinoma cell line, cervix .a 2426 to 3099 1 to 674       674/676
(99 %)
3 diff
(99.6 %id)
BF741982 bocio_tumor .a 2553 to 2989 445 to 10     Submitted on the opposite strand 436/445
(97 %)
0 diff
(100 %id)
BF741972 bocio_tumor .a 2632 to 3003 377 to 7     Submitted on the opposite strand 371/377
(98 %)
0 diff
(100 %id)
BE778138 eye, retinoblastoma .a 2644 to 3406 1 to 749       749/891
(84 %)
29 diff
(96.8 %id)
CB268440 adipose .a 2833 to 3397 16 to 580       565/580
(97 %)
7 diff
(98.8 %id)
TI_154186050   .a 2841 to 3564 114 to 830       717/940
(76 %)
25 diff
(97.4 %id)
TI_154186202   .a 2841 to 3548 122 to 824       703/959
(73 %)
26 diff
(97.3 %id)
BI062738 uterus_tumor .a 2957 to 3084 128 to 1       128/128
(100 %)
0 diff
(100 %id)
TI_157612905   .a 2965 to 3726 858 to 104   AAA   755/755
(100 %)
49 diff
(93.6 %id)
BE866048 bladder, carcinoma, cell line .a 3018 to 3722 1 to 692       692/742
(93 %)
41 diff
(94.5 %id)
AW968304   .a 3121 to 3841 35 to 756   tiling clone,   722/756
(95 %)
6 diff
(99.3 %id)
AA258106 germinal center B cell .a 3121 to 3487 1 to 368       368/368
(100 %)
1 diff
(99.8 %id)
AI141250 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3253 to 3726 473 to 1       473/473
(100 %)
5 diff
(99.0 %id)
AA779940 liver and spleen .a 3262 to 3732 472 to 4       469/472
(99 %)
0 diff
(100 %id)
BG534079 lung .a 3309 to 4161 1 to 844       844/881
(95 %)
31 diff
(96.5 %id)
W53003 parathyroid gland, parathyroid tumor .a 3359 to 3809 1 to 455   fully sequenced,   455/455
(100 %)
5 diff
(99.0 %id)
BX097443 parathyroid gland, parathyroid tumor .a 3362 to 4089 1 to 729   tiling clone,   729/731
(99 %)
5 diff
(99.4 %id)
CF527913 placenta .a 3394 to 3726 350 to 18   AAA   333/333
(100 %)
1 diff
(99.7 %id)
AW016315   .a 3412 to 3726 332 to 18   AAA   315/315
(100 %)
0 diff
(100 %id)
AA902343 carcinoid, lung .a 3419 to 3727 309 to 1       309/309
(100 %)
2 diff
(99.4 %id)
AV660761 corresponding non cancerous liver tissue .a 3434 to 3840 1 to 407     Submitted on the opposite strand 407/411
(99 %)
6 diff
(98.6 %id)
C01514   .a 3471 to 3726 1 to 256       256/256
(100 %)
0 diff
(100 %id)
W92226 heart .a 3472 to 3880 1 to 409   fully sequenced,   409/409
(100 %)
2 diff
(99.6 %id)
TI_154107738   .a 3494 to 4263 830 to 69   AAA   762/928
(82 %)
15 diff
(98.4 %id)
CA439592 lung, Lung Focal Fibrosis .a 3583 to 4262 697 to 19   AAA   679/679
(100 %)
3 diff
(99.6 %id)
BQ006347 Chondrosarcoma, Left Pelvis .a 3610 to 4265 674 to 19   AAA   656/656
(100 %)
2 diff
(99.7 %id)
CA447181 Chondrosarcoma, Left Pelvis .a 3610 to 4263 672 to 19   AAA   654/654
(100 %)
2 diff
(99.7 %id)
BQ003187 Chondrosarcoma, Left Pelvis .a 3613 to 4263 669 to 19   AAA   651/651
(100 %)
3 diff
(99.6 %id)
AI669749 Prostate .a 3684 to 4265 582 to 1       582/582
(100 %)
3 diff
(99.5 %id)
BE349148 malignant melanoma, metastatic to lymphnode, skin .a 3732 to 4265 534 to 1   tiling clone,   534/534
(100 %)
2 diff
(99.7 %id)
AA046353 uterus .a 3740 to 3973 1 to 234       234/236
(99 %)
2 diff
(99.2 %id)
BM992419 Bone, Subchondral Bone .a 3746 to 4265 538 to 19   AAA   520/520
(100 %)
6 diff
(98.9 %id)
BQ030219 lung, Metastatic Chondrosarcoma .a 3756 to 4263 526 to 19   AAA   508/508
(100 %)
3 diff
(99.5 %id)
G36762   .a 3777 to 4263 500 to 8     Submitted on the opposite strand 493/500
(98 %)
0 diff
(100 %id)
W53004 parathyroid gland, parathyroid tumor .a 3779 to 4270 500 to 1   fully sequenced,   500/500
(100 %)
15 diff
(97.0 %id)
AI379661 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3798 to 4263 468 to 4       465/468
(99 %)
0 diff
(100 %id)
W94935 heart .a 3850 to 4264 424 to 1   tiling clone, fully sequenced,   424/424
(100 %)
12 diff
(97.2 %id)
AA257976 germinal center B cell .a 3864 to 4266 407 to 5   tiling clone,   403/407
(99 %)
0 diff
(100 %id)
CB048270 Prostate .a 3884 to 4263 14 to 393   fully sequenced, AAA   380/393
(96 %)
6 diff
(98.5 %id)
AA377605 synovial membrane .a 3908 to 4219 1 to 312       312/312
(100 %)
1 diff
(99.7 %id)
AW264851 lung, two pooled squamous cell carcinomas .a 3908 to 4263 356 to 1       356/356
(100 %)
2 diff
(99.5 %id)
BE049527 adenocarcinoma, Pancreas .a 3917 to 4263 347 to 1       347/347
(100 %)
2 diff
(99.5 %id)
AI000669 breast .a 3922 to 4266 352 to 8       345/352
(98 %)
0 diff
(100 %id)
CB048269 Prostate .a 3923 to 4263 368 to 28   fully sequenced, AAA   341/341
(100 %)
1 diff
(99.8 %id)
FN094860 breast carcinoma .a 3926 to 4008 83 to 1     Submitted on the opposite strand 83/84
(98 %)
1 diff
(98.9 %id)
AW194249 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 3952 to 4263 312 to 1       312/317
(98 %)
1 diff
(99.7 %id)
AW138018   .a 3963 to 4263 318 to 18   AAA   301/301
(100 %)
1 diff
(99.7 %id)
GD135911   .a 3981 to 4263 1 to 283   AAA   283/283
(100 %)
3 diff
(99.0 %id)
CR627369 colon carcinoma .b 1 to 4047 1 to 4047 exact tiling clone, available from DKFZ, AAA   4047/4047
(100 %)
4 diff
(100.0 %id)
AW501465 lymph .b 8 to 452 1 to 447       447/447
(100 %)
22 diff
(95.1 %id)
CF143886 lymph .b 8 to 409 1 to 402       402/402
(100 %)
3 diff
(99.3 %id)
CF121668 lymph .b 8 to 329 1 to 322       322/322
(100 %)
16 diff
(95.1 %id)
TI_154175606   .b 14 to 428 79 to 493       415/416
(99 %)
1 diff
(99.8 %id)
DA378868 thalamus .b 1754 to 2305 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
AW390809 stomach .b 2673 to 3094 10 to 431       422/593
(71 %)
5 diff
(99.2 %id)
BF836398 head_neck .b 2674 to 3243 578 to 9     Submitted on the opposite strand 570/578
(98 %)
0 diff
(100 %id)
BG427155 Kidney .c 1 to 670 1 to 668 R76Q D155E L195W tiling clone,   668/668
(100 %)
7 diff
(99.0 %id)
DA923832 small intestine .d 1 to 573 2 to 576   tiling clone, capped   575/575
(100 %)
2 diff
(99.7 %id)
AA291112 germinal center B cell .e 1 to 285 1 to 285   tiling clone, Submitted on the opposite strand 285/286
(99 %)
1 diff
(99.7 %id)
DW462979 Liver .e 81 to 428 17 to 364       348/364
(95 %)
10 diff
(97.3 %id)
BQ948773 sciatic nerve .e 104 to 1081 12 to 1003 exact tiling clone,   992/1038
(95 %)
43 diff
(95.9 %id)
DQ352452   .f 1 to 291 1 to 291 exact tiling clone,   291/291
(100 %)
0 diff
(100 %id)
BC090934 Lymph, normal germinal center B cells Gene RNASEL, variant not shown       AAA This clone was ignored    
CB050074 Prostate Gene RNASEL, variant not shown       AAA Suspected internal deletion, this clone was ignored    
CB050075 Prostate Gene RNASEL, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI