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Gene RNASE6TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
116 supporting clones for gene RNASE6 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BG620110 placenta .a 1 to 740 1 to 740       740/742
(99 %)
19 diff
(97.5 %id)
BC020848 placenta .a 2 to 1061 1 to 1060 exact tiling clone, available from MGC, AAA   1060/1060
(100 %)
2 diff
(99.9 %id)
CD696006 normal nasopharynx .a 2 to 477 23 to 498       476/498
(95 %)
6 diff
(98.8 %id)
NM_005615.4   .a 2 to 1066 1 to 1065 exact RefSeq,   1065/1065
(100 %)
3 diff
(99.8 %id)
BU198462   .a 4 to 567 1 to 565       565/566
(99 %)
14 diff
(97.6 %id)
CD709753 normal nasopharynx .a 8 to 492 20 to 506       487/506
(96 %)
12 diff
(97.7 %id)
BP297534   .a 10 to 579 1 to 570       570/570
(100 %)
1 diff
(99.9 %id)
CR736730 liver and spleen .a 16 to 718 1 to 702       702/705
(99 %)
5 diff
(99.3 %id)
CD703578 normal nasopharynx .a 17 to 490 46 to 519       474/519
(91 %)
6 diff
(98.9 %id)
AK313580 Spleen .a 19 to 747 1 to 729 exact     729/729
(100 %)
1 diff
(99.9 %id)
BP200285 amygdala .a 19 to 441 1 to 423       423/426
(99 %)
3 diff
(99.3 %id)
CD695641 normal nasopharynx .a 19 to 673 32 to 686       655/686
(95 %)
6 diff
(99.2 %id)
CD701591 normal nasopharynx .a 19 to 388 23 to 392       370/392
(94 %)
6 diff
(98.5 %id)
CD704882 normal nasopharynx .a 19 to 128 17 to 126       110/126
(87 %)
6 diff
(95.3 %id)
CD688056 normal nasopharynx .a 20 to 626 1 to 607       607/607
(100 %)
2 diff
(99.7 %id)
CD698445 normal nasopharynx .a 20 to 362 29 to 374       346/374
(92 %)
6 diff
(98.4 %id)
CD703535 normal nasopharynx .a 20 to 380 33 to 393       361/393
(91 %)
6 diff
(98.5 %id)
CD705435 normal nasopharynx .a 20 to 490 24 to 495       472/495
(95 %)
13 diff
(97.4 %id)
CD705979 normal nasopharynx .a 20 to 519 23 to 522       500/522
(95 %)
7 diff
(98.7 %id)
DA943948 Spleen .a 20 to 596 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
CD702355 normal nasopharynx .a 22 to 640 25 to 643       619/643
(96 %)
6 diff
(99.1 %id)
CD703959 normal nasopharynx .a 22 to 640 1 to 618       618/618
(100 %)
3 diff
(99.6 %id)
BU198442   .a 31 to 593 1 to 562       562/562
(100 %)
9 diff
(98.4 %id)
R80287 placenta .a 36 to 402 1 to 372       372/446
(83 %)
7 diff
(98.5 %id)
BM920166 pooled pancreas and spleen .a 37 to 1056 1 to 1039 R89Q AAA   1039/1039
(100 %)
44 diff
(95.8 %id)
N99815 liver and spleen .a 40 to 404 1 to 370       370/370
(100 %)
8 diff
(97.9 %id)
DN990135 brain, whole brain .a 51 to 693 1 to 642       642/642
(100 %)
6 diff
(99.1 %id)
BI468275 insulinoma, Pancreas .a 52 to 504 9 to 460   fully sequenced,   452/460
(98 %)
10 diff
(97.9 %id)
CD708015 normal nasopharynx .a 57 to 637 48 to 628       581/628
(92 %)
6 diff
(99.1 %id)
AA278536 germinal center B cell .a 87 to 546 8 to 467   fully sequenced,   460/467
(98 %)
6 diff
(98.8 %id)
FN055633 breast carcinoma .a 90 to 198 109 to 1     Submitted on the opposite strand 109/109
(100 %)
0 diff
(100 %id)
CD511515 Blood vessels - aorta, basilar and artery .a 97 to 836 1 to 751 exact     751/752
(99 %)
15 diff
(98.1 %id)
CD705158 normal nasopharynx .a 100 to 580 25 to 505       481/505
(95 %)
8 diff
(98.5 %id)
CD704537 normal nasopharynx .a 112 to 714 38 to 640       603/640
(94 %)
6 diff
(99.1 %id)
BF063615 colon, colon tumor, RER+ .a 114 to 495 476 to 95   AAA   382/466
(81 %)
1 diff
(99.8 %id)
AA456519 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 116 to 621 1 to 506       506/506
(100 %)
0 diff
(100 %id)
BP432143   .a 116 to 563 1 to 447       447/447
(100 %)
3 diff
(99.4 %id)
N45724 multiple sclerosis lesions .a 120 to 368 1 to 248       248/248
(100 %)
1 diff
(99.6 %id)
AW406516 lymph .a 159 to 815 1 to 657 exact     657/657
(100 %)
6 diff
(99.1 %id)
TI_154144122   .a 166 to 892 80 to 813 exact     734/735
(99 %)
8 diff
(99.0 %id)
BP263159 small intestine .a 223 to 787 1 to 565 exact     565/565
(100 %)
2 diff
(99.7 %id)
BP370537 testis .a 229 to 796 1 to 568 exact     568/568
(100 %)
0 diff
(100 %id)
FN170179 breast carcinoma .a 233 to 328 97 to 1     Submitted on the opposite strand 97/97
(100 %)
1 diff
(99.0 %id)
AA312989 Bone .a 236 to 492 1 to 257       257/257
(100 %)
0 diff
(100 %id)
AW949718   .a 237 to 800 1 to 567 S82N R88C S108L A119G Y122N ...     567/598
(94 %)
18 diff
(97.0 %id)
AW949723   .a 237 to 865 1 to 630 L141V     630/644
(97 %)
12 diff
(98.2 %id)
BM710423 eye, RPE and Choroid .a 274 to 599 1 to 326   fully sequenced,   326/326
(100 %)
0 diff
(100 %id)
TI_1948220063   .a 288 to 745 126 to 583       458/1451
(31 %)
6 diff
(99.6 %id)
FN058738 breast carcinoma .a 293 to 379 1 to 85       85/90
(94 %)
6 diff
(93.4 %id)
CR456965   .a 295 to 747 1 to 453 exact     453/453
(100 %)
1 diff
(99.8 %id)
EL735628 mixed .a 295 to 746 1 to 452       452/621
(72 %)
1 diff
(99.9 %id)
FN131940 breast carcinoma .a 303 to 387 1 to 84       84/85
(98 %)
2 diff
(97.7 %id)
AI142565 brain, glioblastoma (pooled) .a 308 to 1056 757 to 5       753/757
(99 %)
0 diff
(100 %id)
BF334601 colon .a 329 to 718 14 to 401       388/401
(96 %)
6 diff
(98.6 %id)
AW861587 colon .a 344 to 695 1 to 362       362/362
(100 %)
39 diff
(89.3 %id)
AW026402 brain, glioblastoma (pooled) .a 347 to 1056 706 to 2       705/706
(99 %)
0 diff
(100 %id)
CB242107 Human Lung Epithelial cells, lung .a 351 to 1060 728 to 19   AAA   710/710
(100 %)
4 diff
(99.5 %id)
AA263000 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 367 to 841 475 to 1       475/475
(100 %)
1 diff
(99.8 %id)
BQ006859 Chondrosarcoma, Left Pelvis .a 400 to 1055 672 to 19   AAA   654/654
(100 %)
3 diff
(99.6 %id)
AA433867 ovarian tumor, ovary .a 407 to 900 1 to 494       494/494
(100 %)
5 diff
(99.0 %id)
AW051423 brain, glioblastoma (pooled) .a 409 to 1062 658 to 7       652/668
(97 %)
0 diff
(100 %id)
BG756344 B-cells, primary B-cells from tonsils (cell line) .a 438 to 1055 1 to 620   AAA   620/620
(100 %)
4 diff
(99.4 %id)
BI060060 uterus_tumor .a 446 to 688 243 to 1       243/243
(100 %)
0 diff
(100 %id)
BE816884 breast_normal .a 449 to 671 227 to 6       222/236
(94 %)
0 diff
(100 %id)
BI468274 insulinoma, Pancreas .a 474 to 1025 601 to 50   fully sequenced,   552/601
(91 %)
13 diff
(97.9 %id)
BE816940 breast_normal .a 476 to 675 1 to 199       199/211
(94 %)
6 diff
(97.2 %id)
AI418898 brain, glioblastoma (pooled) .a 493 to 1062 570 to 1       570/570
(100 %)
3 diff
(99.5 %id)
AI597727 Prostate .a 496 to 998 562 to 60       503/562
(89 %)
0 diff
(100 %id)
FN163103 breast carcinoma .a 499 to 587 1 to 89       89/89
(100 %)
0 diff
(100 %id)
AW268809 pooled .a 499 to 1056 561 to 4       558/561
(99 %)
0 diff
(100 %id)
AI523183 aorta .a 502 to 1056 557 to 3       555/557
(99 %)
0 diff
(100 %id)
BE858435 brain, glioblastoma (pooled) .a 502 to 1062 562 to 2       561/562
(99 %)
0 diff
(100 %id)
AA278859 germinal center B cell .a 516 to 1055 539 to 1   fully sequenced,   539/539
(100 %)
8 diff
(98.6 %id)
CB046840 2 pooled tumors (clear cell type), Kidney .a 520 to 895 24 to 399       376/399
(94 %)
6 diff
(98.5 %id)
AI378734 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 526 to 1055 530 to 1       530/530
(100 %)
4 diff
(99.3 %id)
BE041812 pooled .a 538 to 1040 510 to 8     Submitted on the opposite strand 503/510
(98 %)
0 diff
(100 %id)
FN077363 breast carcinoma .a 539 to 623 84 to 1     Submitted on the opposite strand 84/84
(100 %)
2 diff
(97.7 %id)
AA993270   .a 541 to 1062 527 to 7       521/527
(98 %)
0 diff
(100 %id)
BG745600 Spleen .a 543 to 1062 1 to 531       531/553
(96 %)
16 diff
(97.2 %id)
AI151384 placenta .a 544 to 1062 522 to 5   tiling clone,   518/522
(99 %)
0 diff
(100 %id)
AA234555 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 550 to 1010 461 to 1       461/461
(100 %)
11 diff
(97.7 %id)
AI421331 brain, glioblastoma (pooled) .a 550 to 1056 510 to 6       505/510
(99 %)
0 diff
(100 %id)
AI423437 brain, glioblastoma (pooled) .a 566 to 1056 495 to 6       490/496
(98 %)
0 diff
(100 %id)
BM671863 eye, RPE and Choroid .a 569 to 1060 510 to 19   fully sequenced, AAA   492/492
(100 %)
1 diff
(99.8 %id)
AI023287 liver and spleen .a 571 to 1055 485 to 1       485/489
(99 %)
5 diff
(99.0 %id)
AI080148 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 571 to 1062 492 to 1       492/492
(100 %)
4 diff
(99.2 %id)
AA701545 liver and spleen .a 574 to 1055 482 to 1       482/482
(100 %)
2 diff
(99.6 %id)
EL946984 eyeball .a 585 to 1037 1 to 453       453/453
(100 %)
5 diff
(98.9 %id)
AA834541 germinal center B cell .a 597 to 1062 500 to 35       466/500
(93 %)
0 diff
(100 %id)
AW104264 pooled .a 598 to 1057 462 to 2       461/462
(99 %)
0 diff
(100 %id)
FN064179 breast carcinoma .a 608 to 678 1 to 71       71/72
(98 %)
1 diff
(98.7 %id)
AA973893 pooled germ cell tumors .a 609 to 1055 458 to 12   AAA   447/447
(100 %)
1 diff
(99.8 %id)
FN172588 breast carcinoma .a 619 to 719 99 to 1     Submitted on the opposite strand 99/99
(100 %)
2 diff
(98.0 %id)
N49002 multiple sclerosis lesions .a 630 to 1061 430 to 1       430/430
(100 %)
3 diff
(99.4 %id)
FN098751 breast carcinoma .a 632 to 734 1 to 100       100/100
(100 %)
5 diff
(95.0 %id)
AA777226 liver and spleen .a 640 to 1052 415 to 1       415/415
(100 %)
20 diff
(95.2 %id)
AI873418 pooled .a 646 to 1055 410 to 1       410/410
(100 %)
9 diff
(97.9 %id)
FN137179 breast carcinoma .a 652 to 731 1 to 78       78/79
(98 %)
3 diff
(96.3 %id)
AA455158 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 652 to 733 82 to 1       82/82
(100 %)
2 diff
(97.6 %id)
AI220385 pooled .a 655 to 742 88 to 1       88/88
(100 %)
2 diff
(97.8 %id)
FN132198 breast carcinoma .a 658 to 732 1 to 74       74/75
(98 %)
3 diff
(96.0 %id)
D79804 aorta .a 661 to 889 1 to 234       234/235
(99 %)
11 diff
(95.4 %id)
CD678519 eye, Trabecular meshwork .a 680 to 1060 1 to 381   AAA   381/381
(100 %)
3 diff
(99.3 %id)
R22158 placenta .a 744 to 1055 317 to 1       317/447
(70 %)
6 diff
(98.7 %id)
FN106144 breast carcinoma .a 768 to 868 99 to 1     Submitted on the opposite strand 99/110
(90 %)
1 diff
(99.1 %id)
AI263505 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 768 to 1062 297 to 3       295/297
(99 %)
0 diff
(100 %id)
BE466696 pooled germ cell tumors .a 782 to 1062 281 to 1       281/281
(100 %)
1 diff
(99.7 %id)
BE466877 pooled germ cell tumors .a 782 to 1062 281 to 1       281/281
(100 %)
1 diff
(99.7 %id)
BP300053   .a 785 to 1055 1 to 271   AAA   271/271
(100 %)
1 diff
(99.7 %id)
FN149145 breast carcinoma .a 786 to 906 1 to 116       116/116
(100 %)
7 diff
(94.0 %id)
N71348 liver and spleen .a 803 to 1055 253 to 1       253/257
(98 %)
1 diff
(99.7 %id)
N71398 liver and spleen .a 803 to 1055 253 to 1       253/257
(98 %)
1 diff
(99.7 %id)
AW205476   .a 807 to 1055 1 to 249   AAA Submitted on the opposite strand 249/249
(100 %)
2 diff
(99.2 %id)
FN112081 breast carcinoma .a 814 to 902 89 to 1     Submitted on the opposite strand 89/90
(98 %)
0 diff
(100 %id)
R21748 placenta .a 841 to 1061 222 to 1       222/227
(97 %)
4 diff
(98.3 %id)
AI590889 ovary, tumor, 5 pooled (see description) .a 884 to 1055 172 to 1       172/172
(100 %)
0 diff
(100 %id)
FN117046 breast carcinoma .a 921 to 1030 1 to 106       106/106
(100 %)
4 diff
(96.3 %id)
FN102605 breast carcinoma .a 980 to 1043 1 to 65       65/65
(100 %)
2 diff
(97.0 %id)
FN155833 breast carcinoma .a 992 to 1057 68 to 3     Submitted on the opposite strand 66/71
(92 %)
0 diff
(100 %id)
AV734069 pheochromocytoma .b 1 to 684 1 to 619 C19R Q63L N64P T65F F66C ... tiling clone, Suspected internal deletion 619/619
(100 %)
18 diff
(97.1 %id)
CD705803 normal nasopharynx Gene RNASE6, variant not shown         This clone was ignored    
AV734893 pheochromocytoma Gene RNASE6, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI