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Gene RGS20TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
87 supporting clones for gene RGS20 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AY046538   .a 1 to 2104 1 to 2102 exact tiling clone,   2102/2102
(100 %)
3 diff
(99.9 %id)
NM_170587.2   .a 1 to 2102 1 to 2102 exact RefSeq, AAA   2102/2102
(100 %)
0 diff
(100 %id)
AF366057 retina .a 573 to 2104 1 to 1530       1530/1530
(100 %)
3 diff
(99.9 %id)
AU098559   .a 599 to 824 75 to 300       226/300
(75 %)
8 diff
(97.4 %id)
CB565896 mixed .a 604 to 1250 1 to 648       648/930
(69 %)
28 diff
(97.0 %id)
AF074979   .a 606 to 2102 1 to 1497   tiling clone,   1497/1497
(100 %)
1 diff
(100.0 %id)
CV028948 mixed .a 606 to 1210 1 to 605       605/605
(100 %)
3 diff
(99.6 %id)
AF493940 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 606 to 1259 1 to 654       654/654
(100 %)
0 diff
(100 %id)
TI_1948084056   .a 652 to 1263 735 to 123       613/1093
(56 %)
21 diff
(98.1 %id)
TI_1948084330   .a 685 to 1263 702 to 119       584/1163
(50 %)
25 diff
(97.9 %id)
BG188530   .a 836 to 1153 1 to 318       318/318
(100 %)
2 diff
(99.4 %id)
BF110442 carcinoid, lung .a 849 to 1305 459 to 3       457/459
(99 %)
0 diff
(100 %id)
AA242973 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 946 to 1457 1 to 512       512/512
(100 %)
0 diff
(100 %id)
BF589264 pooled .a 969 to 1254 286 to 1       286/286
(100 %)
0 diff
(100 %id)
BF217853 brain, glioblastoma .a 1179 to 1717 1 to 541       541/841
(64 %)
11 diff
(98.7 %id)
EL946860 eyeball .a 1187 to 1702 16 to 531       516/531
(97 %)
6 diff
(98.9 %id)
AA450144   .a 1217 to 1653 1 to 437       437/437
(100 %)
0 diff
(100 %id)
BX281538 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1218 to 1710 1 to 493       493/493
(100 %)
0 diff
(100 %id)
TI_154124712   .a 1234 to 2101 924 to 70   AAA   855/956
(89 %)
19 diff
(98.1 %id)
N47280 multiple sclerosis lesions .a 1327 to 1568 1 to 242       242/242
(100 %)
0 diff
(100 %id)
CA432380 cell lines, Chondrosarcoma .a 1482 to 2097 634 to 19   AAA   616/616
(100 %)
1 diff
(99.9 %id)
AI264190 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1487 to 2104 618 to 1   tiling clone,   618/618
(100 %)
0 diff
(100 %id)
AI141796 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1497 to 2103 595 to 1       595/721
(82 %)
14 diff
(98.1 %id)
BI493418 cochlea, ear .a 1509 to 1986 23 to 500   AAA   478/500
(95 %)
6 diff
(98.8 %id)
AI970470 pooled germ cell tumors .a 1557 to 2098 556 to 16   AAA   541/541
(100 %)
3 diff
(99.5 %id)
AW206057   .a 1565 to 2097 550 to 18   AAA   533/533
(100 %)
1 diff
(99.9 %id)
BF594643 brain, glioblastoma (pooled) .a 1597 to 2098 502 to 1       502/502
(100 %)
1 diff
(99.9 %id)
BF059374 pooled germ cell tumors .a 1597 to 2098 504 to 3       502/504
(99 %)
0 diff
(100 %id)
N48599 multiple sclerosis lesions .a 1642 to 2103 466 to 1       466/467
(99 %)
5 diff
(99.0 %id)
DB536324 hippocampus .a 1647 to 2100 1 to 454     Submitted on the opposite strand 454/456
(99 %)
2 diff
(99.6 %id)
AI498504 anaplastic oligodendroglioma, brain .a 1649 to 2102 452 to 1       452/453
(99 %)
2 diff
(99.6 %id)
DB560358 hypothalamus .a 1676 to 2105 1 to 429   tiling clone, Submitted on the opposite strand 429/429
(100 %)
3 diff
(99.4 %id)
AW450608   .a 1677 to 2097 438 to 18   AAA   421/421
(100 %)
3 diff
(99.3 %id)
AA252145 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1678 to 2103 426 to 1       426/426
(100 %)
1 diff
(99.8 %id)
DB560392 hypothalamus .a 1681 to 2105 1 to 425     Submitted on the opposite strand 425/425
(100 %)
1 diff
(99.8 %id)
DB554123 hypothalamus .a 1686 to 2105 1 to 420     Submitted on the opposite strand 420/420
(100 %)
1 diff
(99.8 %id)
AI074725 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1695 to 2098 404 to 1       404/404
(100 %)
1 diff
(99.8 %id)
AA450087   .a 1702 to 2102 401 to 1       401/401
(100 %)
0 diff
(100 %id)
AI435991 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1722 to 2098 378 to 2       377/378
(99 %)
0 diff
(100 %id)
AI435005 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1737 to 2102 366 to 1       366/366
(100 %)
0 diff
(100 %id)
CB141523 Liver .a 1743 to 2104 1 to 362       362/363
(99 %)
4 diff
(98.9 %id)
AA626204 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1881 to 2101 221 to 1       221/221
(100 %)
0 diff
(100 %id)
BC063490 Brain, fetal, whole pooled .b 1 to 1698 1 to 1698 exact tiling clone, available from MGC, AAA   1698/1698
(100 %)
1 diff
(100.0 %id)
BI522695 brain .b 1 to 730 1 to 731       731/731
(100 %)
4 diff
(99.5 %id)
TI_44185549   .b 1 to 730 31 to 761       731/761
(96 %)
10 diff
(98.7 %id)
NM_003702.3   .b 1 to 1703 1 to 1703 exact RefSeq, AAA   1703/1703
(100 %)
0 diff
(100 %id)
BQ226975 melanotic melanoma, skin .b 12 to 672 16 to 678       663/935
(70 %)
23 diff
(97.6 %id)
CR594448 Neuroblastoma Cot 25-normalized .b 13 to 1676 1 to 1664       1664/1664
(100 %)
0 diff
(100 %id)
AL525981 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .b 13 to 908 1 to 896   fully sequenced,   896/896
(100 %)
1 diff
(99.9 %id)
AL546580 placenta, Placenta Cot 25-normalized .b 45 to 825 1 to 770   fully sequenced,   770/770
(100 %)
3 diff
(99.7 %id)
CR622266 Placenta Cot 25-normalized .b 46 to 1670 1 to 1625       1625/1625
(100 %)
0 diff
(100 %id)
AF060877 brain .b 124 to 1703 1 to 1578   tiling clone, AAA   1578/1578
(100 %)
3 diff
(99.9 %id)
TI_1948214784   .b 133 to 855 128 to 858   fully sequenced,   731/858
(85 %)
34 diff
(96.1 %id)
TI_1948214954   .b 133 to 846 127 to 848   fully sequenced,   722/848
(85 %)
22 diff
(97.5 %id)
TI_1948215133   .b 133 to 287 128 to 282   fully sequenced,   155/181
(85 %)
6 diff
(96.7 %id)
TI_1948215309   .b 133 to 467 134 to 468   fully sequenced,   335/468
(71 %)
6 diff
(98.8 %id)
EL734974 mixed .b 135 to 805 1 to 671       671/671
(100 %)
1 diff
(99.9 %id)
DB468869 hippocampus .b 143 to 561 1 to 419       419/419
(100 %)
0 diff
(100 %id)
CR602987 Placenta Cot 25-normalized .b 150 to 1669 1 to 1520       1520/1520
(100 %)
0 diff
(100 %id)
AL545424 placenta, Placenta Cot 25-normalized .b 150 to 931 1 to 790   fully sequenced,   790/790
(100 %)
9 diff
(98.9 %id)
BG760472 melanotic melanoma, high MDR (cell line), skin .b 153 to 997 1 to 842   available from MGC,   842/860
(97 %)
17 diff
(98.1 %id)
BC015614 Skin, melanotic melanoma, high MDR. .b 154 to 1698 1 to 1545   available from MGC, AAA   1545/1545
(100 %)
0 diff
(100 %id)
TI_1948215134   .b 257 to 864 728 to 119   fully sequenced,   610/728
(83 %)
5 diff
(99.4 %id)
TI_1948214785   .b 406 to 864 582 to 123   fully sequenced,   460/582
(79 %)
5 diff
(99.2 %id)
TI_1948214955   .b 406 to 864 580 to 121   fully sequenced,   460/580
(79 %)
5 diff
(99.2 %id)
TI_1948215310   .b 406 to 864 579 to 120   fully sequenced,   460/579
(79 %)
5 diff
(99.2 %id)
AL571979 placenta, Placenta Cot 25-normalized .b 795 to 1670 873 to 1   fully sequenced,   873/873
(100 %)
2 diff
(99.8 %id)
AL525939 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .b 878 to 1676 798 to 1   fully sequenced,   798/798
(100 %)
10 diff
(98.8 %id)
AL571152 placenta, Placenta Cot 25-normalized .b 901 to 1664 767 to 5   fully sequenced,   763/767
(99 %)
15 diff
(98.1 %id)
AF366054 retina .c 1 to 1667 1 to 1665 exact tiling clone,   1665/1665
(100 %)
3 diff
(99.9 %id)
AF366055 retina .d 1 to 1518 1 to 1516 exact tiling clone,   1516/1516
(100 %)
3 diff
(99.9 %id)
AF366056 retina .e 1 to 1434 1 to 1432 exact tiling clone,   1432/1432
(100 %)
3 diff
(99.8 %id)
CV339549 breast .f 1 to 277 292 to 13   tiling clone, Submitted on the opposite strand 280/310
(90 %)
0 diff
(100 %id)
DB485049 hypothalamus .f 122 to 576 1 to 455   tiling clone,   455/455
(100 %)
4 diff
(99.2 %id)
DB490281 hypothalamus .f 122 to 496 1 to 384       384/386
(99 %)
16 diff
(95.9 %id)
DN994807 brain, whole brain .g 1 to 668 15 to 683 exact tiling clone,   669/683
(97 %)
6 diff
(99.2 %id)
DA512228 brain .g 109 to 666 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
BC054867 Pooled, 40 cell lines .h 1 to 610 1 to 610 K5T tiling clone, available from MGC, AAA   610/610
(100 %)
2 diff
(99.7 %id)
BG396993 melanotic melanoma, skin .h 36 to 502 1 to 467   available from MGC, AAA   467/467
(100 %)
1 diff
(99.8 %id)
BC031328 Uterus, endometrium adenocarcinoma .h 37 to 502 1 to 466   available from MGC, AAA   466/466
(100 %)
0 diff
(100 %id)
BC018618 Skin, melanotic melanoma. .h 37 to 502 1 to 466   available from MGC, AAA   466/466
(100 %)
0 diff
(100 %id)
BE389290 endometrium, adenocarcinoma cell line, uterus .h 55 to 500 1 to 450   available from MGC,   450/681
(66 %)
11 diff
(98.4 %id)
AK094503 alzheimer cortex .i 1 to 1558 2 to 1559   tiling clone, available from FLJ,   1559/1559
(100 %)
1 diff
(100.0 %id)
DA130350 alzheimer cortex .i 1 to 569 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
BF030911 hypernephroma, Kidney .i 185 to 740 1 to 559 R96Q D97R S98L Y99I P100S ... tiling clone,   559/741
(75 %)
8 diff
(99.0 %id)
DB301032 alzheimer cortex .i 1024 to 1558 535 to 1       535/535
(100 %)
0 diff
(100 %id)
DA737200   .j 1 to 766 2 to 772 exact tiling clone, capped   771/811
(95 %)
9 diff
(98.9 %id)
DB369784   .j 863 to 1391 527 to 1   tiling clone,   527/527
(100 %)
7 diff
(98.7 %id)
DB311185 thalamus Gene RGS20, variant not shown              
DA376532 thalamus Gene RGS20, variant not shown       capped      
DB358545 whole embryo, mainly head Gene RGS20, variant not shown              
DA571670 whole embryo, mainly head Gene RGS20, variant not shown       capped      
N49767 multiple sclerosis lesions Gene RGS20, variant not shown         This clone was ignored    
N52695 multiple sclerosis lesions Gene RGS20, variant not shown         This clone was ignored    
CB045572 colon, juvenile granulosa tumor Gene RGS20, variant not shown       AAA This clone was ignored    
CB045573 colon, juvenile granulosa tumor Gene RGS20, variant not shown         This clone was ignored    
BF221598 pooled germ cell tumors Gene RGS20, variant not shown              
BG251212 adenocarcinoma, cell line, Liver Gene RGS20, variant not shown              
BQ020924 lung, Metastatic Chondrosarcoma Gene RGS20, variant not shown         This clone was ignored    
TI_1948084603   Gene RGS20, variant not shown         This clone was ignored    
BU689747 Human Lung Epithelial cells, lung Gene RGS20, variant not shown         This clone was ignored    
BM679093 eye, fetal eye Gene RGS20, variant not shown       AAA This clone was ignored    
BM722152 eye, fetal eye Gene RGS20, variant not shown         This clone was ignored    
CA415836 Chondrosarcoma Cell line Gene RGS20, variant not shown         This clone was ignored    
BU615460 Bone, Enchondroma cell line Gene RGS20, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI