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Gene RGS13TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
49 supporting clones for gene RGS13 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BU942880 mixed (pool of 40 RNAs) .a 1 to 789 1 to 803 W77V S78E R79Q I80N S81F ... tiling clone,   803/814
(98 %)
27 diff
(96.7 %id)
NM_144766.1   .a 18 to 1475 1 to 1458 exact RefSeq,   1458/1458
(100 %)
0 diff
(100 %id)
BU943419 mixed (pool of 40 RNAs) .a 21 to 786 1 to 776 E118X E133G R134K D135G S136F ...     776/777
(99 %)
19 diff
(97.6 %id)
CR610389 B cells (Ramos cell line) Cot 25-normalized .a 27 to 1416 1 to 1390 exact     1390/1390
(100 %)
0 diff
(100 %id)
AL582920 B cells from Burkitt lymphoma .a 27 to 730 1 to 689   fully sequenced,   689/689
(100 %)
1 diff
(99.9 %id)
BM454211 lymph, lymphoma, cell line .a 28 to 826 1 to 801 exact     801/1115
(71 %)
7 diff
(99.4 %id)
BC016667 Lymph, lymphoma .a 38 to 1468 1 to 1431 exact tiling clone, available from MGC, AAA   1431/1431
(100 %)
0 diff
(100 %id)
BF797538 lymph, lymphoma, cell line .a 38 to 817 27 to 808 W7G I8L C9*     782/988
(79 %)
38 diff
(96.2 %id)
BM455145 lymph, lymphoma, cell line .a 39 to 786 1 to 760 E144K Q147P L149T L150F K151E ...     760/1410
(53 %)
19 diff
(98.7 %id)
AL582871 B cells from Burkitt lymphoma .a 700 to 1416 717 to 1   fully sequenced,   717/717
(100 %)
5 diff
(99.4 %id)
CR599001 B cells (Ramos cell line) Cot 25-normalized .b 1 to 1504 1 to 1504 exact tiling clone,   1504/1504
(100 %)
0 diff
(100 %id)
AF030107 lung .b 30 to 1532 16 to 1519 exact AAA   1504/1519
(99 %)
9 diff
(99.5 %id)
AH007320   .b 30 to 1532 16 to 1519 exact AAA   1504/1519
(99 %)
9 diff
(99.5 %id)
NM_002927.3   .b 37 to 1534 1 to 1498 exact RefSeq,   1498/1498
(100 %)
0 diff
(100 %id)
CB985475 Pooled-Glandular .b 40 to 793 1 to 760       760/846
(89 %)
17 diff
(98.0 %id)
BG177015 lymph, lymphoma, cell line .b 46 to 829 24 to 808 R106K E107R T108D I109Y I110H ...     785/996
(78 %)
37 diff
(96.3 %id)
BG685271 B-cells, primary B-cells from tonsils (cell line) .b 50 to 843 1 to 796 N157K S158Q     796/796
(100 %)
7 diff
(99.2 %id)
BC056866 Lymph, lymphoma .b 52 to 1582 29 to 1559 exact tiling clone, available from MGC, AAA   1531/1547
(98 %)
6 diff
(99.7 %id)
AL583136 B cells from Burkitt lymphoma .b 57 to 801 55 to 790 exact fully sequenced,   736/742
(99 %)
11 diff
(98.6 %id)
BQ050340 leiomyosarcoma, uterus .b 59 to 612 1 to 554       554/1221
(45 %)
5 diff
(99.6 %id)
CB143137 Liver .b 179 to 796 1 to 613       613/613
(100 %)
2 diff
(99.7 %id)
AY562947 brain .b 318 to 797 1 to 480 exact     480/480
(100 %)
0 diff
(100 %id)
BT006929   .b 318 to 795 1 to 478       478/480
(99 %)
1 diff
(99.8 %id)
CR536532   .b 318 to 797 1 to 480 exact     480/480
(100 %)
0 diff
(100 %id)
CV023848 mixed .b 318 to 796 1 to 479       479/633
(75 %)
1 diff
(99.9 %id)
AF493935   .b 318 to 797 1 to 480 L150F     480/480
(100 %)
1 diff
(99.8 %id)
TI_1948143031   .b 318 to 801 133 to 617 Q125S K126Q I127N V128S Y129L ...     485/1363
(35 %)
31 diff
(97.8 %id)
T94013 lung .b 321 to 643 1 to 324       324/412
(78 %)
2 diff
(99.6 %id)
H70046 nose, olfactory epithelium .b 321 to 681 1 to 362       362/364
(99 %)
11 diff
(97.0 %id)
BU932585 mixed (pool of 40 RNAs) .b 408 to 1184 1 to 781       781/781
(100 %)
10 diff
(98.8 %id)
TI_1948143465   .b 447 to 796 476 to 127       350/1306
(26 %)
1 diff
(100.0 %id)
AW662859 pooled .b 449 to 614 1 to 166     Submitted on the opposite strand 166/166
(100 %)
2 diff
(98.8 %id)
FN048963 breast carcinoma .b 473 to 555 1 to 83       83/84
(98 %)
2 diff
(97.7 %id)
AW516010 lymph node, lymphoma, follicular mixed small and largecell .b 505 to 1138 644 to 12   AAA   633/633
(100 %)
19 diff
(97.0 %id)
FN154741 breast carcinoma .b 594 to 696 104 to 2     Submitted on the opposite strand 103/104
(99 %)
0 diff
(100 %id)
CN368834 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 737 to 1444 9 to 717       709/717
(98 %)
6 diff
(99.2 %id)
AL583135 B cells from Burkitt lymphoma .b 771 to 1504 734 to 1   fully sequenced,   734/734
(100 %)
0 diff
(100 %id)
FN166093 breast carcinoma .b 779 to 906 1 to 124       124/124
(100 %)
4 diff
(96.8 %id)
FN086257 breast carcinoma .b 800 to 935 139 to 1     Submitted on the opposite strand 139/142
(97 %)
8 diff
(94.4 %id)
FN167673 breast carcinoma .b 1033 to 1146 1 to 106       106/117
(90 %)
6 diff
(94.9 %id)
AI699379 pooled .b 1056 to 1409 374 to 21   AAA   354/354
(100 %)
2 diff
(99.5 %id)
BX099153 lymph node, lymphoma, follicular mixed small and largecell .b 1084 to 1531 462 to 15   AAA   448/448
(100 %)
0 diff
(100 %id)
AW054946 adenocarcinoma, Pancreas .b 1086 to 1534 455 to 7       449/455
(98 %)
0 diff
(100 %id)
AW664784 pooled .b 1156 to 1533 379 to 1       379/379
(100 %)
2 diff
(99.5 %id)
H70047 nose, olfactory epithelium .b 1191 to 1529 347 to 8       340/347
(97 %)
0 diff
(100 %id)
T93335 lung .b 1232 to 1531 312 to 6       307/316
(97 %)
0 diff
(100 %id)
FN131026 breast carcinoma .b 1256 to 1366 110 to 1     Submitted on the opposite strand 110/110
(100 %)
1 diff
(99.1 %id)
AA728997 germinal center B-cells, tonsil .b 1328 to 1531 221 to 18   AAA   204/204
(100 %)
0 diff
(100 %id)
AI862711 lymph node, lymphoma, follicular mixed small and largecell .b 1331 to 1532 202 to 1       202/202
(100 %)
0 diff
(100 %id)
BC036950 Lymph, lymphoma .c 1 to 5114 12 to 5124 exact tiling clone, available from MGC, AAA   5113/5113
(100 %)
5 diff
(100.0 %id)
BM455396 lymph, lymphoma, cell line .c 1 to 940 1 to 947   available from MGC,   947/1018
(93 %)
24 diff
(97.7 %id)
AA714861 germinal center B cell .d-u 1 to 523 525 to 3 exact tiling clone,   523/525
(99 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI