To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene RFX5TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
466 supporting clones for gene RFX5 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CR625881 fetal brain .a 1 to 2459 1 to 2459 exact tiling clone,   2459/2459
(100 %)
0 diff
(100 %id)
NM_000449.3   .b 1 to 3618 1 to 3618 exact RefSeq,   3618/3618
(100 %)
1 diff
(100.0 %id)
DA216946 brain .b 2 to 542 2 to 542   tiling clone, capped   541/541
(100 %)
0 diff
(100 %id)
DA460419 tongue, tumor tissue .b 2 to 564 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA484309 brain .b 2 to 528 2 to 528   capped   527/527
(100 %)
1 diff
(99.9 %id)
DB277847 uterus .b 2 to 530 2 to 530   capped   529/529
(100 %)
1 diff
(99.9 %id)
DB292672 uterus .b 2 to 545 2 to 547   capped   546/546
(100 %)
2 diff
(99.7 %id)
DA727272   .b 12 to 579 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DB084291 testis .b 21 to 477 2 to 458   capped   457/457
(100 %)
1 diff
(99.8 %id)
BP348781 brain .b 24 to 604 1 to 581       581/581
(100 %)
5 diff
(99.2 %id)
BP363878 lung .b 24 to 610 1 to 587       587/587
(100 %)
1 diff
(99.9 %id)
DA861119 placenta .b 30 to 628 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
DA538214 Kidney .b 32 to 624 2 to 595   capped   592/594
(99 %)
2 diff
(99.7 %id)
DB153029 thymus .b 33 to 611 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
BX344746   .b 42 to 1133 1 to 1083   tiling clone, fully sequenced,   1083/1083
(100 %)
11 diff
(99.0 %id)
BP223897 colon mucosa .b 46 to 749 1 to 718       714/760
(93 %)
17 diff
(97.8 %id)
BP223898 colon mucosa .b 46 to 698 1 to 661       661/748
(88 %)
16 diff
(97.9 %id)
DA454022 tongue, tumor tissue .b 46 to 616 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB089803 testis .b 59 to 607 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
X85786   .b 70 to 2322 10 to 2262 exact tiling clone,   2253/2262
(99 %)
4 diff
(99.9 %id)
BX344745   .b 1103 to 2267 1152 to 1   tiling clone, fully sequenced,   1152/1152
(100 %)
19 diff
(98.4 %id)
DC366618   .c 1 to 427 5 to 431       431/431
(100 %)
2 diff
(99.6 %id)
DB151899 thymus .c 1 to 605 2 to 606   tiling clone, capped   605/605
(100 %)
0 diff
(100 %id)
DA548820   .c 30 to 591 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA687772   .c 30 to 577 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DB146485 thymus .c 43 to 602 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
BX423384 brain, fetal brain .c 58 to 1043 1 to 965       965/974
(99 %)
22 diff
(97.8 %id)
BI460155 testis .c 86 to 799 1 to 712       712/712
(100 %)
8 diff
(98.9 %id)
DA321345 hippocampus .c 90 to 635 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
BP332074 renal proximal tubule .c 90 to 672 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
DA340473 hippocampus .c 91 to 666 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DT217878 brain .c 91 to 595 1 to 504       504/504
(100 %)
2 diff
(99.7 %id)
NM_001025603.1   .c 91 to 3701 1 to 3611 exact RefSeq,   3611/3611
(100 %)
1 diff
(100.0 %id)
DA715142   .c 91 to 541 2 to 453   capped   452/452
(100 %)
2 diff
(99.6 %id)
DB084727 testis .c 91 to 651 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB221190 trachea .c 91 to 662 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA106098 cerebellum .c 92 to 637 2 to 548   capped   547/547
(100 %)
2 diff
(99.7 %id)
DA218615 brain .c 92 to 758 2 to 668   capped   667/667
(100 %)
0 diff
(100 %id)
DA227803 brain .c 92 to 665 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA237154 brain .c 92 to 680 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
DA240422 brain .c 92 to 687 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DA324323 hippocampus .c 92 to 642 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA482525   .c 92 to 666 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA721234   .c 92 to 647 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA722809   .c 92 to 641 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA799601 brain .c 92 to 676 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA915625   .c 92 to 651 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DB077024 testis .c 92 to 644 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DB077030 testis .c 92 to 645 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DB107924 thymus .c 92 to 658 2 to 567   capped   566/569
(99 %)
2 diff
(99.7 %id)
DB225011 trachea .c 92 to 674 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DB247406 uterus .c 92 to 641 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB281464 uterus .c 92 to 647 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DB282658 uterus .c 92 to 643 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA229400 brain .c 95 to 646 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA804115 brain .c 96 to 623 2 to 530   capped   529/529
(100 %)
1 diff
(99.9 %id)
BI545835 brain, hippocampus .c 98 to 907 1 to 811       811/811
(100 %)
9 diff
(98.9 %id)
DB238035 trachea .c 98 to 681 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DB090142 testis .c 99 to 653 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
BI257128 cervical carcinoma cell line, cervix .c 102 to 751 34 to 689       656/689
(95 %)
17 diff
(97.6 %id)
DB284796 uterus .c 102 to 648 2 to 548   capped   547/548
(99 %)
1 diff
(99.9 %id)
DB471177.
matches multiple genes
hippocampus .c 103 to 535 1 to 435     also hits gene skorporbo 435/478
(91 %)
12 diff
(97.5 %id)
DB484045.
matches multiple genes
hippocampus .c 103 to 609 1 to 507     also hits gene skorporbo 507/508
(99 %)
2 diff
(99.7 %id)
DB294545   .c 103 to 917 2 to 815   capped   814/883
(92 %)
6 diff
(99.4 %id)
TI_44165845   .c 104 to 907 120 to 924       805/924
(87 %)
11 diff
(98.9 %id)
DA909011   .c 104 to 668 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA939830 Spleen .c 104 to 695 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DB225887 trachea .c 104 to 658 2 to 556   capped   555/559
(99 %)
2 diff
(99.7 %id)
DA211556 brain .c 105 to 653 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA417825 thalamus .c 109 to 677 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA515904 brain .c 109 to 659 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA518693 brain .c 109 to 664 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
BU509155 leiomyosarcoma, uterus .c 109 to 938 12 to 849       838/897
(93 %)
26 diff
(97.2 %id)
DA103396 cerebellum .c 110 to 641 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
DA171775 amygdala .c 110 to 662 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DA215987 brain .c 110 to 454 2 to 345   capped   344/345
(99 %)
2 diff
(99.5 %id)
DA322780 hippocampus .c 110 to 666 2 to 560   capped   559/559
(100 %)
3 diff
(99.5 %id)
DB061949 testis .c 110 to 670 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DB062252 testis .c 110 to 643 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
DB157705 thymus .c 110 to 716 2 to 608   capped   607/607
(100 %)
0 diff
(100 %id)
AK312289 cerebellum .c 111 to 2155 1 to 2045 T37I     2045/2045
(100 %)
2 diff
(100.0 %id)
DA074094 cerebellum .c 112 to 668 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
BX415732 thymus .c 112 to 911 1 to 800       800/800
(100 %)
0 diff
(100 %id)
BP202222 amygdala .c 114 to 695 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP234823 coronary artery .c 114 to 695 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA093022 cerebellum .c 115 to 666 2 to 553   capped   552/552
(100 %)
2 diff
(99.7 %id)
DA437060 tongue, tumor tissue .c 115 to 712 2 to 599   capped   598/598
(100 %)
3 diff
(99.5 %id)
DA098452 cerebellum .c 120 to 664 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA100260 cerebellum .c 120 to 666 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA303903 hippocampus .c 120 to 679 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA365505 subthalamic nucleus .c 120 to 682 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA382551 thalamus .c 120 to 732 2 to 614   capped   613/613
(100 %)
0 diff
(100 %id)
DA400209 thalamus .c 120 to 680 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
BQ643090 lymph, lymphoma, cell line .c 120 to 993 1 to 877       877/935
(93 %)
18 diff
(98.1 %id)
DB155427 thymus .c 120 to 695 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA097741 cerebellum .c 122 to 635 2 to 516   capped   515/515
(100 %)
2 diff
(99.7 %id)
DA229589 brain .c 122 to 690 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA241482 brain .c 122 to 684 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB041789 testis .c 122 to 703 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
CN373277 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 125 to 686 1 to 560       560/560
(100 %)
4 diff
(99.3 %id)
BI460508 testis .c 130 to 916 1 to 785       785/933
(84 %)
27 diff
(97.2 %id)
BI464272 testis .c 130 to 884 1 to 753       753/768
(98 %)
20 diff
(97.4 %id)
BU180851 large cell carcinoma, lung .c 131 to 974 11 to 864       854/887
(96 %)
20 diff
(97.8 %id)
DB284729 uterus .c 131 to 677 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DB230287 trachea .c 133 to 713 2 to 582   capped   581/581
(100 %)
2 diff
(99.7 %id)
CV569824 cornea, eye .c 134 to 749 1 to 616       616/616
(100 %)
0 diff
(100 %id)
BE244428 leukopheresis .c 134 to 623 1 to 490       490/490
(100 %)
6 diff
(98.8 %id)
BE244962 leukopheresis .c 134 to 451 1 to 319       319/320
(99 %)
20 diff
(93.8 %id)
DA244287 brain .c 135 to 724 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DB448041.
matches multiple genes
testis .c 135 to 528 1 to 393     also hits gene skorporbo 393/393
(100 %)
2 diff
(99.5 %id)
DB453911.
matches multiple genes
testis .c 135 to 633 1 to 499     also hits gene skorporbo 499/499
(100 %)
0 diff
(100 %id)
DA216227 brain .c 136 to 708 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA226022 brain .c 136 to 676 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DA246453 brain .c 136 to 687 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA457768 tongue, tumor tissue .c 136 to 704 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA459214 tongue, tumor tissue .c 136 to 716 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA819944   .c 136 to 656 2 to 522   capped   521/521
(100 %)
0 diff
(100 %id)
DB028936 testis .c 136 to 670 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
DB076671 testis .c 136 to 689 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB126622 thymus .c 136 to 664 2 to 530   capped   529/529
(100 %)
1 diff
(99.9 %id)
DB215379 trachea .c 136 to 685 2 to 551   capped   550/550
(100 %)
2 diff
(99.7 %id)
DB250238 uterus .c 136 to 633 2 to 499   capped   498/498
(100 %)
0 diff
(100 %id)
DB275120 uterus .c 136 to 696 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DB286106 uterus .c 136 to 684 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DB165314 thymus .c 138 to 698 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
BU172350 melanotic melanoma, skin .c 140 to 891 1 to 755       755/893
(84 %)
8 diff
(99.2 %id)
BU165341 eye, retinoblastoma .c 141 to 1048 1 to 923       923/923
(100 %)
30 diff
(96.8 %id)
BM153680 leukopheresis .c 141 to 670 1 to 530       530/543
(97 %)
14 diff
(97.5 %id)
DB471146 hippocampus .c 142 to 622 1 to 480       480/480
(100 %)
2 diff
(99.6 %id)
DA567951   .c 142 to 687 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
BP246001 Kidney .c 143 to 729 1 to 587       587/587
(100 %)
0 diff
(100 %id)
BP246006 Kidney .c 143 to 734 1 to 592       592/592
(100 %)
0 diff
(100 %id)
BP247201 Kidney .c 143 to 729 1 to 587       587/587
(100 %)
0 diff
(100 %id)
DA384970 thalamus .c 144 to 735 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DA441313 tongue, tumor tissue .c 144 to 720 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DB246014 uterus, tumor tissue .c 144 to 722 2 to 580   capped   579/581
(99 %)
1 diff
(99.9 %id)
DB276636 uterus .c 144 to 687 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
BG250872 adenocarcinoma, cell line, Liver .c 151 to 922 1 to 769       769/1138
(67 %)
22 diff
(98.1 %id)
BM905177 melanotic melanoma, skin .c 153 to 1151 1 to 1012       1010/1027
(98 %)
33 diff
(96.8 %id)
BQ051099 leiomyosarcoma, uterus .c 153 to 846 1 to 704       702/1137
(61 %)
17 diff
(98.6 %id)
BC017471 Uterus, leiomyosarcoma .c 157 to 2380 1 to 2224 exact tiling clone, available from MGC, AAA   2224/2224
(100 %)
1 diff
(100.0 %id)
BM459237 lymph, lymphoma, cell line .c 164 to 1039 1 to 887       887/1063
(83 %)
23 diff
(97.9 %id)
BU430505 lymph .c 168 to 654 1 to 489       491/489
(100 %)
7 diff
(98.6 %id)
TI_154151880   .c 173 to 781 80 to 688       609/678
(89 %)
14 diff
(98.0 %id)
BG702765 brain, hippocampus .c 175 to 531 51 to 406       355/406
(87 %)
12 diff
(97.1 %id)
BE886212 leiomyosarcoma, uterus .c 178 to 857 1 to 686       686/736
(93 %)
10 diff
(98.7 %id)
BE884157 leiomyosarcoma, uterus .c 183 to 826 1 to 649       649/707
(91 %)
10 diff
(98.6 %id)
CN373273 embryonic stem cells, cell lines H1, H7, andH9 .c 199 to 848 1 to 651       651/651
(100 %)
1 diff
(99.9 %id)
CN373276 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 200 to 852 1 to 653       653/653
(100 %)
0 diff
(100 %id)
BQ436689 large cell carcinoma, lung .c 239 to 1054 165 to 989       825/1001
(82 %)
21 diff
(98.0 %id)
AK223526   .c 292 to 2281 1 to 1990 D58G N268D     1990/1990
(100 %)
4 diff
(99.8 %id)
TI_1948139471   .c 302 to 1276 121 to 1089       883/1262
(69 %)
39 diff
(97.0 %id)
TI_1948139472   .c 302 to 1204 124 to 1026       903/1304
(69 %)
17 diff
(98.7 %id)
TI_1948139710   .c 302 to 973 127 to 802       676/1331
(50 %)
16 diff
(98.8 %id)
TI_1948139711   .c 302 to 1462 123 to 1268       1146/1268
(90 %)
50 diff
(96.1 %id)
TI_1948139972   .c 302 to 1055 124 to 886       763/1379
(55 %)
29 diff
(97.9 %id)
TI_1948139973   .c 302 to 1233 117 to 1049       933/1276
(73 %)
22 diff
(98.3 %id)
TI_1948140225   .c 302 to 1060 123 to 881       759/1350
(56 %)
19 diff
(98.6 %id)
TI_1948140226   .c 302 to 1449 124 to 1271       1024/1273
(80 %)
40 diff
(96.9 %id)
CV023305 mixed .c 305 to 814 1 to 510       510/510
(100 %)
21 diff
(95.9 %id)
DA723488   .c 317 to 918 2 to 603   capped   602/602
(100 %)
0 diff
(100 %id)
DA627213 Kidney .c 372 to 927 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
CR997156 T-Lymphocytes .c 453 to 895 1 to 444       444/444
(100 %)
1 diff
(99.8 %id)
DA815316   .c 477 to 1040 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
BE019732 adenocarcinoma cell line, ovary .c 563 to 1054 1 to 492       492/492
(100 %)
8 diff
(98.4 %id)
CN373275 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 586 to 1194 8 to 615       608/615
(98 %)
7 diff
(98.9 %id)
BM807105 lymph, lymphoma, cell line .c 593 to 1566 1 to 976       976/976
(100 %)
21 diff
(97.9 %id)
AW401875 lymph .c 596 to 1115 1 to 520       520/520
(100 %)
5 diff
(99.1 %id)
TI_154138036   .c 603 to 1187 80 to 664       585/585
(100 %)
8 diff
(98.7 %id)
BQ687522 ductal carcinoma, cell line, Pancreas .c 604 to 1422 1 to 825       825/826
(99 %)
11 diff
(98.7 %id)
BI753071 brain .c 735 to 1440 1 to 709       709/710
(99 %)
10 diff
(98.6 %id)
TI_57217760   .c 735 to 1440 104 to 812       709/813
(87 %)
16 diff
(98.1 %id)
BM793977 Ascites, stomach .c 841 to 1407 1 to 567       567/567
(100 %)
1 diff
(99.9 %id)
AL050135 uterus .c 849 to 3700 1 to 2852   available from DKFZ, AAA   2852/2852
(100 %)
3 diff
(99.9 %id)
BX433132 brain, fetal brain .c 864 to 1574 830 to 113       718/885
(81 %)
29 diff
(96.8 %id)
DA104213 cerebellum .c 979 to 1539 2 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
AW814842 stomach .c 1044 to 1517 484 to 3       482/484
(99 %)
11 diff
(97.8 %id)
AW814779 stomach .c 1054 to 1515 473 to 7       467/476
(98 %)
15 diff
(96.9 %id)
BF983148 duodenal adenocarcinoma, cell line, small intestine .c 1055 to 1709 1 to 655       655/657
(99 %)
6 diff
(99.1 %id)
BM916957 blood, natural killer cells, cell line .c 1057 to 2093 1 to 1048       1048/1086
(96 %)
48 diff
(95.6 %id)
BX433133 brain, fetal brain .c 1062 to 1693 628 to 1       628/793
(79 %)
14 diff
(98.3 %id)
AW504420 lymph .c 1094 to 1613 8 to 527       520/527
(98 %)
7 diff
(98.7 %id)
TI_154160534   .c 1094 to 1754 80 to 738       659/705
(93 %)
8 diff
(98.9 %id)
CR984508 T-Lymphocytes .c 1157 to 1730 1 to 574       574/576
(99 %)
1 diff
(99.9 %id)
TI_1948139974   .c 1163 to 2154 1127 to 125       1003/1317
(76 %)
0 diff
(100 %id)
DA847259 placenta .c 1170 to 1717 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
TI_1948140227   .c 1170 to 2154 1128 to 125       1004/1291
(77 %)
0 diff
(100 %id)
BQ050321 leiomyosarcoma, uterus .c 1196 to 1996 24 to 854       831/1126
(73 %)
44 diff
(96.1 %id)
TI_1948139712   .c 1219 to 2154 1073 to 125       949/1335
(71 %)
0 diff
(100 %id)
CX869850 embryonic stem .c 1230 to 1923 1 to 694       694/694
(100 %)
0 diff
(100 %id)
TI_1948139473   .c 1233 to 2154 1037 to 122       916/1274
(71 %)
0 diff
(100 %id)
BG574203 breast, mammary adenocarcinoma, cell line .c 1298 to 1990 1 to 693       693/695
(99 %)
1 diff
(99.9 %id)
DA955822 Spleen .c 1317 to 1871 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
BM470233 lymph, lymphoma, cell line .c 1346 to 2072 1 to 734       734/1133
(64 %)
17 diff
(98.5 %id)
CB146819 Liver .c 1349 to 1835 1 to 487       487/487
(100 %)
0 diff
(100 %id)
BG105973 lymph, lymphoma, cell line .c 1384 to 2110 1 to 728       728/765
(95 %)
14 diff
(98.2 %id)
AA093889   .c 1387 to 1735 1 to 345       345/345
(100 %)
8 diff
(97.7 %id)
BG258612 embryonal carcinoma, cell line, testis .c 1407 to 2101 13 to 711       699/917
(76 %)
16 diff
(98.3 %id)
DA425937 colon .c 1452 to 2004 2 to 554   capped   553/553
(100 %)
2 diff
(99.7 %id)
BX423383 brain, fetal brain .c 1458 to 2486 1025 to 1       1025/1025
(100 %)
16 diff
(98.5 %id)
TI_149297137   .c 1500 to 2380 948 to 78   AAA   871/951
(91 %)
13 diff
(98.7 %id)
BX441220 brain, fetal brain .c 1563 to 2489 926 to 1       926/926
(100 %)
18 diff
(98.1 %id)
CR982352 T-Lymphocytes .c 1574 to 2303 1 to 732       732/737
(99 %)
4 diff
(99.5 %id)
CN373271 embryonic stem cells, cell lines H1, H7, andH9 .c 1598 to 2121 1 to 524       524/524
(100 %)
0 diff
(100 %id)
BX455108 brain, fetal brain .c 1631 to 2512 882 to 1       882/882
(100 %)
5 diff
(99.5 %id)
AA337841 endometrium .c 1638 to 1887 1 to 251       251/251
(100 %)
2 diff
(99.3 %id)
BF035081 adenocarcinoma, ovary .c 1645 to 2145 1 to 503       503/503
(100 %)
2 diff
(99.7 %id)
DA344324 substantia nigra .c 1647 to 2215 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
BM982258 lung, Primary Lung Cystic Fibrosis EpithelialCells .c 1667 to 2380 730 to 19   AAA   712/712
(100 %)
2 diff
(99.8 %id)
AA356157   .c 1695 to 1962 1 to 268       268/268
(100 %)
0 diff
(100 %id)
BE857631 Prostate .c 1714 to 2380 666 to 1       666/666
(100 %)
24 diff
(96.4 %id)
BE888402 leiomyosarcoma, uterus .c 1716 to 2163 1 to 448       448/448
(100 %)
2 diff
(99.6 %id)
AI937337 anaplastic oligodendroglioma, brain .c 1736 to 2380 640 to 1       640/640
(100 %)
9 diff
(98.6 %id)
CA308152 Alveolar Macrophage, lung .c 1748 to 2380 653 to 19   AAA   635/635
(100 %)
2 diff
(99.7 %id)
BI256444 cervical carcinoma cell line, cervix .c 1774 to 2691 1 to 923       923/924
(99 %)
26 diff
(97.2 %id)
BM704232 eye, Retina Foveal and Macular .c 1778 to 2182 1 to 405       405/405
(100 %)
0 diff
(100 %id)
TI_151703797   .c 1782 to 2379 685 to 76   AAA   610/1063
(57 %)
34 diff
(96.9 %id)
BF448259 carcinoid, lung .c 1796 to 2381 588 to 3       586/588
(99 %)
0 diff
(100 %id)
DA181209 amygdala .c 1798 to 2371 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BM312910 Pancreas, Purified pancreatic islet .c 1815 to 2380 566 to 1       566/569
(99 %)
0 diff
(100 %id)
R17838 whole brain .c 1821 to 2230 1 to 412       412/424
(97 %)
7 diff
(98.4 %id)
BM313205 Pancreas, Purified pancreatic islet .c 1825 to 2285 1 to 461       461/461
(100 %)
0 diff
(100 %id)
CX873720 embryonic stem .c 1858 to 2691 1 to 834       834/834
(100 %)
1 diff
(99.9 %id)
CK822236 Pancreas, Purified pancreatic islet .c 1869 to 2380 1 to 512   fully sequenced, AAA Submitted on the opposite strand 512/512
(100 %)
1 diff
(99.9 %id)
AW117828 esophagus, squamous cell carcinoma .c 1879 to 2380 503 to 1       503/643
(78 %)
16 diff
(97.6 %id)
EC541823 Prostate .c 1886 to 1995 1 to 106       106/108
(98 %)
5 diff
(95.4 %id)
BE206330 adenocarcinoma cell line, ovary .c 1888 to 2381 496 to 3       494/496
(99 %)
0 diff
(100 %id)
BM661706 eye, Retina Foveal and Macular .c 1888 to 2380 511 to 19   AAA   493/496
(99 %)
0 diff
(100 %id)
BE885850 leiomyosarcoma, uterus .c 1897 to 2620 1 to 715       715/815
(87 %)
29 diff
(96.5 %id)
AI290028 serous papillary carcinoma, high grade, 2pooled tumors, uterus .c 1901 to 2251 343 to 1       343/465
(73 %)
8 diff
(98.3 %id)
T03396   .c 1917 to 2380 467 to 1       467/472
(98 %)
7 diff
(98.6 %id)
AA815144 germinal center B cell .c 1928 to 2380 469 to 17   AAA   453/453
(100 %)
7 diff
(98.5 %id)
BQ340199 nervous_normal .c 1930 to 2340 1 to 416       416/416
(100 %)
29 diff
(93.1 %id)
BI035602 nervous_normal .c 1931 to 2340 1 to 408       408/408
(100 %)
2 diff
(99.6 %id)
BQ340227 nervous_normal .c 1931 to 2340 1 to 408       408/408
(100 %)
1 diff
(99.8 %id)
BQ340248 nervous_normal .c 1931 to 2340 1 to 408       408/408
(100 %)
4 diff
(99.1 %id)
BQ340381 nervous_normal .c 1931 to 2340 1 to 407       407/407
(100 %)
5 diff
(98.8 %id)
BQ340466 nervous_normal .c 1931 to 2340 1 to 408       408/408
(100 %)
4 diff
(99.1 %id)
AI453235 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .c 1939 to 2380 440 to 1       440/446
(98 %)
8 diff
(98.3 %id)
BM478895 melanotic melanoma, skin .c 1942 to 2735 1 to 798       798/1216
(65 %)
13 diff
(99.0 %id)
AA837250 germinal center B cell .c 1946 to 2380 447 to 15   AAA   433/433
(100 %)
2 diff
(99.6 %id)
AV756415 bone marrow .c 1956 to 2378 66 to 488   AAA   423/488
(86 %)
6 diff
(98.8 %id)
BF947553 nervous_normal .c 1960 to 2294 46 to 381       336/395
(85 %)
6 diff
(98.5 %id)
AU134614 placenta .c 1963 to 2664 2 to 717   capped   716/776
(92 %)
18 diff
(97.7 %id)
AI082859   .c 2004 to 2381 382 to 5       378/382
(98 %)
0 diff
(100 %id)
W20267 lung .c 2010 to 2515 1 to 507       507/511
(99 %)
11 diff
(97.9 %id)
AW204028   .c 2016 to 2380 382 to 18   AAA   365/365
(100 %)
1 diff
(99.8 %id)
CD106058 brain, Pituitary .c 2023 to 2893 1 to 877       877/877
(100 %)
8 diff
(99.1 %id)
BF855274 prostate_normal .c 2061 to 2532 5 to 474       470/474
(99 %)
6 diff
(98.8 %id)
BQ340269 nervous_normal .c 2069 to 2340 7 to 278       272/278
(97 %)
1 diff
(99.7 %id)
BF961080 nervous_normal .c 2072 to 2340 9 to 277       269/277
(97 %)
6 diff
(97.9 %id)
AW135703   .c 2114 to 2380 285 to 19   AAA   267/267
(100 %)
0 diff
(100 %id)
BF804093 colon_ins .c 2147 to 2441 1 to 289       289/289
(100 %)
6 diff
(98.0 %id)
BG028561 Bone, osteosarcoma, cell line .c 2149 to 2786 1 to 638       638/638
(100 %)
1 diff
(99.9 %id)
AI218650   .c 2162 to 2380 236 to 18   AAA   219/219
(100 %)
1 diff
(99.6 %id)
AA128568 uterus .c 2175 to 2620 1 to 447       447/447
(100 %)
6 diff
(98.7 %id)
BG292309 bladder, transitional cell papilloma, cell line .c 2176 to 2971 1 to 801       801/935
(85 %)
31 diff
(96.7 %id)
AA040819 uterus .c 2177 to 2682 1 to 508       508/513
(99 %)
4 diff
(99.3 %id)
BG109212 Bone, osteosarcoma, cell line .c 2244 to 3066 1 to 818       818/823
(99 %)
26 diff
(96.9 %id)
CD514829 White Matter .c 2246 to 3109 1 to 867       867/867
(100 %)
6 diff
(99.4 %id)
BJ991039 hepatoblastoma .c 2248 to 2833 1 to 586       586/586
(100 %)
1 diff
(99.9 %id)
BU187114 eye, retinoblastoma .c 2262 to 3072 1 to 823       823/877
(93 %)
21 diff
(97.7 %id)
CK822237 Pancreas, Purified pancreatic islet .c 2284 to 2380 115 to 19   fully sequenced, AAA Submitted on the opposite strand 97/97
(100 %)
0 diff
(100 %id)
CN373278 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 2308 to 2868 1 to 579       579/579
(100 %)
14 diff
(97.6 %id)
AA314220 colon .c 2330 to 2884 1 to 555   tiling clone,   555/555
(100 %)
0 diff
(100 %id)
R47815 breast .c 2357 to 2670 9 to 328       320/333
(96 %)
15 diff
(95.5 %id)
BQ422414 embryonal carcinoma, cell line, testis .c 2375 to 3244 1 to 883       883/891
(99 %)
26 diff
(97.1 %id)
BI754327 brain .c 2402 to 3370 1 to 979       979/1021
(95 %)
39 diff
(96.2 %id)
TI_57215775   .c 2402 to 3370 35 to 1013       979/1055
(92 %)
39 diff
(96.4 %id)
BM456614 lymph, lymphoma, cell line .c 2412 to 3084 1 to 677       677/1137
(59 %)
22 diff
(98.1 %id)
BE545534 cervical carcinoma cell line, cervix .c 2441 to 3029 1 to 590       590/795
(74 %)
9 diff
(98.9 %id)
BU166686 melanotic melanoma, skin .c 2496 to 3336 1 to 841       841/844
(99 %)
7 diff
(99.2 %id)
BG501890 embryonal carcinoma, testis .c 2498 to 3289 1 to 790       790/794
(99 %)
30 diff
(96.3 %id)
BM453709 melanotic melanoma, skin .c 2500 to 3339 1 to 853       853/921
(92 %)
17 diff
(98.2 %id)
CA389047 eye, RPE/choroid .c 2520 to 2941 1 to 422       422/422
(100 %)
0 diff
(100 %id)
BM803752 leiomyosarcoma, uterus .c 2521 to 3407 1 to 898       898/1001
(89 %)
18 diff
(98.3 %id)
BE544655 cervical carcinoma cell line, cervix .c 2535 to 3283 1 to 741       741/771
(96 %)
29 diff
(96.3 %id)
CR737405 multiple sclerosis lesions .c 2567 to 3275 1 to 709       709/709
(100 %)
1 diff
(99.9 %id)
AW992050 breast_normal .c 2679 to 3300 1 to 624       624/625
(99 %)
18 diff
(97.2 %id)
CB147980 Liver .c 2683 to 3188 1 to 506       506/506
(100 %)
1 diff
(99.9 %id)
AL550513 placenta, Placenta Cot 25-normalized .c 2732 to 3667 1 to 937       937/937
(100 %)
20 diff
(97.9 %id)
AI990496 pooled germ cell tumors .c 2736 to 3289 561 to 8   tiling clone,   554/561
(98 %)
0 diff
(100 %id)
BG391805 embryonal carcinoma, cell line, testis .c 2755 to 3449 1 to 693       693/1001
(69 %)
6 diff
(99.5 %id)
BF968933 adrenal cortex carcinoma, cell line, adrenal gland .c 2761 to 3471 1 to 701       701/945
(74 %)
15 diff
(98.5 %id)
TI_227714706   .c 2763 to 3700 1013 to 84   AAA   930/1009
(92 %)
20 diff
(98.1 %id)
TI_227715793   .c 2770 to 3700 1002 to 84   AAA   919/1021
(90 %)
29 diff
(97.2 %id)
BQ686723 ductal carcinoma, cell line, Pancreas .c 2771 to 3629 893 to 19   AAA Submitted on the opposite strand 875/879
(99 %)
22 diff
(97.5 %id)
BM129224 Islets of Langerhans, Pancreas .c 2772 to 3290 1 to 519   fully sequenced,   519/519
(100 %)
2 diff
(99.7 %id)
BM129045 Islets of Langerhans, Pancreas .c 2774 to 3242 1 to 469   fully sequenced,   469/469
(100 %)
2 diff
(99.6 %id)
BG392495 embryonal carcinoma, cell line, testis .c 2797 to 3355 1 to 558       558/558
(100 %)
2 diff
(99.7 %id)
BX415731 thymus .c 2803 to 3667 867 to 1       867/867
(100 %)
11 diff
(98.8 %id)
AI797342 pooled .c 2814 to 3289 476 to 1       476/476
(100 %)
0 diff
(100 %id)
TI_149299015   .c 2851 to 3700 931 to 94   AAA   838/939
(89 %)
18 diff
(98.1 %id)
AI989563 pooled germ cell tumors .c 2852 to 3144 293 to 1       293/293
(100 %)
3 diff
(99.0 %id)
BG389291 embryonal carcinoma, cell line, testis .c 2877 to 3585 1 to 718       718/889
(80 %)
19 diff
(97.9 %id)
CD365343 Alveolar Macrophage, lung .c 2892 to 3700 824 to 19   AAA   806/806
(100 %)
8 diff
(99.1 %id)
CB243344 Human Lung Epithelial cells, lung .c 2894 to 3646 768 to 17   AAA   752/752
(100 %)
7 diff
(99.1 %id)
CA774570 Pancreas, Purified pancreatic islet .c 2970 to 3699 730 to 1       730/730
(100 %)
5 diff
(99.4 %id)
TI_149311271   .c 2975 to 3700 810 to 85   AAA   726/964
(75 %)
6 diff
(99.4 %id)
BI857159 breast, mammary adenocarcinoma, cell line .c 2978 to 3701 1 to 728       728/742
(98 %)
10 diff
(98.7 %id)
TI_57186822   .c 2978 to 3701 55 to 782       728/877
(83 %)
10 diff
(98.9 %id)
CD366895 Alveolar Macrophage, lung .c 2983 to 3700 736 to 19   AAA   718/718
(100 %)
3 diff
(99.6 %id)
BU689323 lung .c 2984 to 3700 734 to 19   AAA   716/716
(100 %)
1 diff
(99.9 %id)
BM465415 eye, retinoblastoma .c 2986 to 3700 1 to 715   AAA   715/715
(100 %)
6 diff
(99.2 %id)
BU684818 lung, Primary Lung Cystic Fibrosis EpithelialCells .c 3014 to 3700 704 to 19   AAA   686/686
(100 %)
3 diff
(99.6 %id)
CU454003 epidermis .c 3025 to 3315 15 to 305       291/320
(90 %)
2 diff
(99.4 %id)
BF982029 duodenal adenocarcinoma, cell line, small intestine .c 3029 to 3700 1 to 670   AAA   670/670
(100 %)
9 diff
(98.7 %id)
BM888333 eye .c 3041 to 3542 1 to 502       502/503
(99 %)
3 diff
(99.5 %id)
BM998552 lung, Metastatic Chondrosarcoma .c 3057 to 3700 662 to 19   AAA   644/644
(100 %)
2 diff
(99.7 %id)
BG120010 adenocarcinoma, cell line, Liver .c 3071 to 3633 1 to 571       571/661
(86 %)
26 diff
(96.1 %id)
BU508822 leiomyosarcoma, uterus .c 3084 to 3700 1 to 617       617/621
(99 %)
1 diff
(99.9 %id)
CB123766 Liver .c 3134 to 3477 28 to 371       344/371
(92 %)
6 diff
(98.4 %id)
BJ991040 hepatoblastoma .c 3141 to 3680 540 to 1       540/540
(100 %)
0 diff
(100 %id)
BF438177 carcinoid, lung .c 3144 to 3402 1 to 259     Submitted on the opposite strand 259/259
(100 %)
0 diff
(100 %id)
BE045701 carcinoid, lung .c 3148 to 3577 1 to 430     Submitted on the opposite strand 430/430
(100 %)
1 diff
(99.8 %id)
AU160528   .c 3151 to 3693 541 to 1       541/554
(97 %)
3 diff
(99.5 %id)
AI267871 carcinoid, lung .c 3152 to 3611 1 to 460     Submitted on the opposite strand 460/460
(100 %)
0 diff
(100 %id)
BP431748   .c 3159 to 3493 1 to 335       335/335
(100 %)
3 diff
(99.2 %id)
DV462614 cochlea, ear .c 3159 to 3656 1 to 498       498/498
(100 %)
19 diff
(96.2 %id)
AU155538 placenta .c 3186 to 3699 513 to 2       512/514
(99 %)
0 diff
(100 %id)
BM153457 leukopheresis .c 3189 to 3644 472 to 17   AAA   456/467
(97 %)
6 diff
(98.8 %id)
AA418216 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 3192 to 3453 1 to 262   fully sequenced,   262/262
(100 %)
0 diff
(100 %id)
H96664 melanocyte .c 3204 to 3647 444 to 1       444/444
(100 %)
0 diff
(100 %id)
BF055492 pooled .c 3206 to 3700 495 to 1       495/495
(100 %)
0 diff
(100 %id)
BM153450 leukopheresis .c 3207 to 3644 454 to 17   AAA   438/449
(97 %)
10 diff
(97.8 %id)
BM128805 Islets of Langerhans, Pancreas .c 3212 to 3703 492 to 1   fully sequenced,   492/492
(100 %)
5 diff
(99.0 %id)
BF941282 dorsal root ganglia .c 3221 to 3700 481 to 1       481/481
(100 %)
3 diff
(99.4 %id)
AA709053 uterus .c 3228 to 3700 473 to 1       473/473
(100 %)
0 diff
(100 %id)
AI127781 uterus .c 3236 to 3700 465 to 1       465/465
(100 %)
0 diff
(100 %id)
AI718575 aorta .c 3239 to 3695 461 to 5       457/461
(99 %)
0 diff
(100 %id)
AI620121 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .c 3240 to 3701 462 to 1   tiling clone,   462/462
(100 %)
0 diff
(100 %id)
AI139669 uterus .c 3241 to 3700 460 to 1       460/460
(100 %)
1 diff
(99.8 %id)
AI922073 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .c 3241 to 3701 464 to 4       461/464
(99 %)
0 diff
(100 %id)
AW513248 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .c 3242 to 3700 459 to 1       459/459
(100 %)
0 diff
(100 %id)
AA040156 uterus .c 3243 to 3701 465 to 1       465/470
(98 %)
6 diff
(98.8 %id)
AW469357 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .c 3259 to 3701 443 to 1       443/443
(100 %)
0 diff
(100 %id)
BM128942 Islets of Langerhans, Pancreas .c 3262 to 3701 442 to 3   fully sequenced,   440/442
(99 %)
0 diff
(100 %id)
AA583405 germ cell tumor .c 3269 to 3699 431 to 1       431/431
(100 %)
0 diff
(100 %id)
AI923771 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .c 3273 to 3700 428 to 1       428/429
(99 %)
0 diff
(100 %id)
AA128271 uterus .c 3277 to 3701 433 to 1       433/436
(99 %)
9 diff
(98.0 %id)
AI859898 serous papillary carcinoma, high grade, 2pooled tumors, uterus .c 3281 to 3699 422 to 4       419/426
(98 %)
0 diff
(100 %id)
BE547986 cervical carcinoma cell line, cervix .c 3281 to 3694 1 to 410       410/410
(100 %)
4 diff
(99.1 %id)
AI288549 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 3296 to 3700 417 to 13   AAA   405/405
(100 %)
0 diff
(100 %id)
AI151300 placenta .c 3297 to 3701 411 to 7       405/411
(98 %)
0 diff
(100 %id)
AW337740 lymph node, lymphoma, follicular mixed small and largecell .c 3297 to 3701 406 to 2       405/406
(99 %)
0 diff
(100 %id)
AI167924 pooled .c 3298 to 3701 412 to 9       404/412
(98 %)
0 diff
(100 %id)
AI687351 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .c 3299 to 3700 405 to 1       405/405
(100 %)
2 diff
(99.6 %id)
AI865100 lymph node, lymphoma, follicular mixed small and largecell .c 3307 to 3700 420 to 27   AAA   394/394
(100 %)
0 diff
(100 %id)
R49962 breast .c 3308 to 3693 387 to 1       387/390
(99 %)
1 diff
(99.8 %id)
AA768811 germinal center B cell .c 3310 to 3701 400 to 9       392/402
(97 %)
0 diff
(100 %id)
AI572474 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .c 3317 to 3700 384 to 1       384/384
(100 %)
0 diff
(100 %id)
BM128022 Islets of Langerhans, Pancreas .c 3318 to 3651 1 to 334   fully sequenced,   334/334
(100 %)
2 diff
(99.5 %id)
AI003413 Spleen .c 3339 to 3701 366 to 4       363/366
(99 %)
0 diff
(100 %id)
AA535799 colon .c 3345 to 3701 358 to 2       357/358
(99 %)
0 diff
(100 %id)
T26638   .c 3348 to 3700 368 to 11   AAA   358/363
(98 %)
7 diff
(98.1 %id)
AA629119   .c 3350 to 3700 351 to 1       351/351
(100 %)
0 diff
(100 %id)
AW021943 cochlea, ear .c 3350 to 3685 1 to 337   fully sequenced,   337/337
(100 %)
2 diff
(99.5 %id)
BE463699 Kidney .c 3354 to 3699 350 to 5       346/350
(98 %)
0 diff
(100 %id)
BM692743 eye, Retina Foveal and Macular .c 3355 to 3646 1 to 292   AAA   292/292
(100 %)
0 diff
(100 %id)
BM716103 eye, Retina Foveal and Macular .c 3355 to 3646 1 to 293   AAA   293/293
(100 %)
1 diff
(99.7 %id)
AA960958 pooled .c 3359 to 3701 343 to 1       343/343
(100 %)
1 diff
(99.8 %id)
N90691 lung .c 3368 to 3700 333 to 1       333/335
(99 %)
2 diff
(99.5 %id)
BI492902 cochlea, ear .c 3394 to 3690 297 to 1   fully sequenced,   297/297
(100 %)
3 diff
(99.0 %id)
BM987749 mixed .c 3402 to 3700 317 to 19   AAA   299/299
(100 %)
0 diff
(100 %id)
AI370190 follicular lymphoma, lymph node .c 3411 to 3700 290 to 1       290/290
(100 %)
3 diff
(99.0 %id)
AI468072 anaplastic oligodendroglioma, brain .c 3411 to 3701 293 to 1       293/293
(100 %)
4 diff
(98.7 %id)
AA418045 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 3423 to 3701 279 to 1   fully sequenced,   279/279
(100 %)
1 diff
(99.7 %id)
CB218325 mandible, pooled .c 3482 to 3699 1 to 218   AAA   218/218
(100 %)
0 diff
(100 %id)
CB219045 mandible, pooled .c 3482 to 3700 1 to 219   AAA   219/219
(100 %)
3 diff
(98.7 %id)
BM127759 Islets of Langerhans, Pancreas .c 3483 to 3647 165 to 1   fully sequenced,   165/165
(100 %)
0 diff
(100 %id)
N71762 melanocyte .c 3496 to 3700 205 to 1       205/205
(100 %)
0 diff
(100 %id)
AI613136 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .c 3521 to 3701 181 to 1       181/181
(100 %)
0 diff
(100 %id)
AK302891 testis .d 1 to 2100 1 to 2100 exact tiling clone,   2100/2100
(100 %)
1 diff
(100.0 %id)
DC403347 testis .d 1 to 536 1 to 536       536/536
(100 %)
0 diff
(100 %id)
DA003166   .d 22 to 596 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
BM458732 lymph, lymphoma, cell line .e 1 to 878 1 to 886   tiling clone,   886/1174
(75 %)
58 diff
(95.1 %id)
DB065490 testis .e 68 to 607 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DB074697 testis .e 68 to 605 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DB216325 trachea .e 76 to 325 2 to 251   capped   250/250
(100 %)
0 diff
(100 %id)
DA755814   .e 88 to 658 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB444107.
matches multiple genes
testis .e 96 to 536 1 to 443     also hits gene skorporbo 443/443
(100 %)
2 diff
(99.6 %id)
AL040790 testis .e 97 to 749 1 to 653   tiling clone,   653/653
(100 %)
0 diff
(100 %id)
DA105588 cerebellum .e 103 to 703 2 to 603   capped   602/602
(100 %)
0 diff
(100 %id)
DA334099 hippocampus .e 103 to 674 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB024834 testis .e 103 to 655 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB447746.
matches multiple genes
testis .e 108 to 546 1 to 439     also hits gene skorporbo 441/439
(100 %)
8 diff
(98.2 %id)
BE247376 leukopheresis .e 116 to 489 1 to 374       374/374
(100 %)
2 diff
(99.5 %id)
DA316432 hippocampus .e 119 to 676 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DB115143 thymus .e 119 to 671 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB213105 trachea .e 119 to 671 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB253210 uterus .e 119 to 703 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
BM454258 lymph, lymphoma, cell line .e 127 to 903 1 to 785       785/1077
(72 %)
22 diff
(98.0 %id)
DA722328   .e 130 to 703 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BI548386 brain, hippocampus .e 142 to 872 1 to 735       735/735
(100 %)
15 diff
(98.0 %id)
TI_44167207   .e 145 to 872 124 to 855       732/855
(85 %)
17 diff
(98.1 %id)
DA815000   .e 150 to 714 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA215351 brain .e 151 to 700 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA862664 placenta .e 151 to 679 2 to 532   capped   529/531
(99 %)
2 diff
(99.7 %id)
DA717341   .e 160 to 687 9 to 536   capped   528/528
(100 %)
0 diff
(100 %id)
DA226294 brain .e 163 to 733 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
BQ050199 leiomyosarcoma, uterus .e 172 to 761 1 to 606       603/1216
(49 %)
30 diff
(97.6 %id)
DA679155   .e 177 to 703 2 to 532   capped   531/531
(100 %)
3 diff
(99.5 %id)
BU633852 cell lines, Chondrosarcoma .e 675 to 1438 782 to 19   tiling clone, AAA   764/764
(100 %)
1 diff
(99.9 %id)
DA237311 brain .f 1 to 591 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
DA817291   .f 1 to 563 2 to 564   tiling clone, capped   563/563
(100 %)
0 diff
(100 %id)
DA320978 hippocampus .f 4 to 565 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
AU279868   .f 9 to 576 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DA942363 Spleen .f 10 to 584 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DA995157 synovial membrane tissue from rheumatioidarthritis .f 10 to 561 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA024152   .f 11 to 571 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA273291 caudate nucleus .f 18 to 583 2 to 567   capped   566/566
(100 %)
3 diff
(99.5 %id)
DC415332 trachea .f 20 to 355 1 to 336       336/336
(100 %)
2 diff
(99.5 %id)
DA195382 amygdala .f 21 to 584 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA567025 heart .f 21 to 579 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA106222 cerebellum .f 26 to 581 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA106372 cerebellum .f 26 to 565 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA996183 synovial membrane tissue from rheumatioidarthritis .f 26 to 581 2 to 557   capped   556/556
(100 %)
2 diff
(99.7 %id)
BG176625 lymph, lymphoma, cell line .f 27 to 688 1 to 664       662/961
(68 %)
28 diff
(97.1 %id)
BU177196 melanotic melanoma, skin .f 40 to 894 1 to 867 R149P R150K L151A G152W G153W ... tiling clone,   867/885
(97 %)
31 diff
(96.5 %id)
DB222408 trachea .f 40 to 598 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA328838 hippocampus .f 42 to 588 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA669659 esophagus .f 45 to 610 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DB007656 cervix, tumor tissue .f 45 to 614 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB235045 trachea .f 45 to 534 2 to 491   capped   490/490
(100 %)
0 diff
(100 %id)
BF794659 lymph, lymphoma, cell line .f 46 to 867 1 to 823   tiling clone,   821/868
(94 %)
22 diff
(97.5 %id)
BG468216 adenocarcinoma cell line, colon .f 55 to 886 1 to 837   tiling clone,   835/909
(91 %)
28 diff
(97.0 %id)
DA371916 thalamus .f 57 to 597 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA214957 brain .g 1 to 555 2 to 556   tiling clone, capped   555/555
(100 %)
0 diff
(100 %id)
DA093634 cerebellum .g 4 to 578 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DB027409 testis .g 18 to 607 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
DA173802 amygdala .g 39 to 600 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
BQ882809 brain, neuroblastoma, cell line .g 46 to 878 1 to 846 K110X I146X K147Q R154P G155X ... tiling clone,   846/884
(95 %)
27 diff
(97.0 %id)
BX280988 lung .h 1 to 672 1 to 513 A2P E3V D4C E5Q P6S ... tiling clone, Suspected internal deletion 513/513
(100 %)
0 diff
(100 %id)
DB285977 uterus .i 1 to 544 2 to 545   tiling clone, capped   544/544
(100 %)
0 diff
(100 %id)
DB442359 testis .i 2 to 444 1 to 444       444/447
(99 %)
5 diff
(98.9 %id)
DN991691 brain, whole brain .i 35 to 758 10 to 731 R165K tiling clone,   722/731
(98 %)
11 diff
(98.5 %id)
DA800395 brain .i 38 to 606 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA873277 Prostate .i 53 to 621 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA686518   .i 54 to 594 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
BP364412 lung .i 58 to 633 8 to 583       576/576
(100 %)
0 diff
(100 %id)
CN373274 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .i 81 to 661 1 to 581       581/581
(100 %)
0 diff
(100 %id)
CN373272 embryonic stem cells, DMSO-treated H9 cellline .j 1 to 537 5 to 541 exact tiling clone,   541/541
(100 %)
0 diff
(100 %id)
DA398067 thalamus .k 1 to 555 2 to 556   tiling clone, capped   555/555
(100 %)
0 diff
(100 %id)
DB055257 testis .k 44 to 597 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
BI023163 marrow .k 442 to 837 404 to 10   tiling clone,   395/405
(97 %)
0 diff
(100 %id)
DA437715 tongue, tumor tissue .l 1 to 584 2 to 585   tiling clone, capped   584/584
(100 %)
0 diff
(100 %id)
DA819881   .l 22 to 601 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
DB147678 thymus .l 27 to 606 2 to 581   tiling clone, capped   580/580
(100 %)
1 diff
(99.9 %id)
DA046012 bladder .l 39 to 586 2 to 551   capped   550/550
(100 %)
3 diff
(99.5 %id)
BQ050207 leiomyosarcoma, uterus .l 70 to 684 41 to 666 E101G E102K H103T T104R D105* tiling clone,   626/1100
(56 %)
72 diff
(93.5 %id)
DA811337 brain .m 1 to 554 2 to 555 exact tiling clone, capped   554/554
(100 %)
0 diff
(100 %id)
DB050265 testis .n 1 to 560 2 to 561 E26K tiling clone, capped   560/560
(100 %)
1 diff
(99.9 %id)
DB157380 thymus .o 1 to 575 2 to 576 exact tiling clone, capped   575/575
(100 %)
0 diff
(100 %id)
DA953697 Spleen .p 1 to 576 12 to 587 exact tiling clone, capped   579/579
(100 %)
0 diff
(100 %id)
BG028789 Bone, osteosarcoma, cell line .q 1 to 755 1 to 747 exact tiling clone,   747/929
(80 %)
32 diff
(96.6 %id)
CA394760 eye, RPE/choroid .q 578 to 1096 1 to 519   tiling clone,   519/519
(100 %)
0 diff
(100 %id)
CR985969 T-Lymphocytes .q 698 to 1025 1 to 329       329/329
(100 %)
1 diff
(99.7 %id)
AK309072 hippocampus .r 1 to 862 2 to 863 exact tiling clone,   863/863
(100 %)
1 diff
(99.9 %id)
DA332426 hippocampus .r 1 to 582 2 to 583 exact capped   582/582
(100 %)
1 diff
(99.9 %id)
AK311525 small intestine .s 1 to 857 2 to 858 exact tiling clone,   858/858
(100 %)
2 diff
(99.8 %id)
DA923641 small intestine .s 1 to 590 2 to 592 exact capped   591/591
(100 %)
3 diff
(99.5 %id)
DB230922 trachea .t 1 to 608 2 to 609 exact tiling clone, capped   608/608
(100 %)
0 diff
(100 %id)
DA818936   .u 1 to 554 2 to 555 exact tiling clone, capped   554/554
(100 %)
1 diff
(99.9 %id)
DB223968 trachea .u 45 to 606 2 to 563 exact tiling clone, capped   562/562
(100 %)
0 diff
(100 %id)
DA108674 cerebellum .va 1 to 595 2 to 596 exact tiling clone, capped   595/595
(100 %)
0 diff
(100 %id)
DA842997 placenta .vb 1 to 582 2 to 583 exact tiling clone, capped   582/582
(100 %)
0 diff
(100 %id)
DA458673 tongue, tumor tissue .vc 1 to 582 2 to 584 L31S Q32S R33E L34A R35P ... tiling clone, capped   583/583
(100 %)
1 diff
(99.9 %id)
DA242796 brain .vd 1 to 569 2 to 570 exact tiling clone, capped   569/569
(100 %)
0 diff
(100 %id)
DA657475   .ve 1 to 566 2 to 567 exact tiling clone, capped   566/566
(100 %)
0 diff
(100 %id)
DB277642 uterus .vf 1 to 559 3 to 561 exact tiling clone, capped   560/560
(100 %)
2 diff
(99.7 %id)
DA375037 thalamus .vg 1 to 557 2 to 558 exact tiling clone, capped   557/557
(100 %)
0 diff
(100 %id)
BM152026 leukopheresis Gene RFX5, variant not shown         This clone was ignored    
BM152035 leukopheresis Gene RFX5, variant not shown         This clone was ignored    
BF841794 head_neck Gene RFX5, variant not shown         Suspected internal deletion, this clone was ignored    
BP276666 Kidney Gene RFX5, variant not shown         This clone was ignored    
W16997 lung Gene RFX5, variant not shown         Suspected internal deletion, this clone was ignored    
AI277760 placenta Gene RFX5, variant not shown       AAA Suspected internal deletion, this clone was ignored    
AI202706 Prostate Gene RFX5, variant not shown       AAA Suspected internal deletion, this clone was ignored    
AW027312 thymus, pooled Gene RFX5, variant not shown         This clone was ignored    
AW137021   Gene RFX5, variant not shown       AAA Suspected internal deletion, this clone was ignored    
CB048928 Prostate Gene RFX5, variant not shown       fully sequenced, AAA Suspected internal deletion, this clone was ignored    
CB048929 Prostate Gene RFX5, variant not shown       fully sequenced, Suspected internal deletion, this clone was ignored    
BG389277 embryonal carcinoma, cell line, testis Gene RFX5, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t, .u, .va, .vb, .vc, .vd, .ve, .vf, .vg Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI