cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
AJ010232 | .a | 1 to 1488 | 1 to 1488 | exact | tiling clone, | 1488/1488 (100 %) | 0 diff (100 %id) | ||
BC031689 | Brain, adult medulla | .c | 1 to 1213 | 1 to 1213 | L81M | tiling clone, available from MGC, AAA | 1213/1213 (100 %) | 3 diff (99.8 %id) | |
BC069753 | PCR rescued clones | .a | 77 to 1222 | 1 to 1146 | L110M | available from MGC, | 1146/1146 (100 %) | 5 diff (99.6 %id) | |
BG207403 | .b-u | 4 to 746 | 7 to 733 | Q31E V58M C71L R72Q E73N ... | tiling clone, | 727/838 (86 %) | 44 diff (94.8 %id) | ||
BX280855 | brain, medulla | .c | 1 to 517 | 1 to 517 | 517/517 (100 %) | 1 diff (99.9 %id) | |||
CR456564 | .a | 159 to 1341 | 1 to 1183 | exact | 1183/1183 (100 %) | 1 diff (100.0 %id) | |||
CV030310 | mixed | .c | 19 to 652 | 1 to 627 | 627/641 (97 %) | 31 diff (95.2 %id) | |||
DB507421. matches multiple genes | testis | .b-u | 1 to 401 | 402 to 1 | tiling clone, | also hits gene RFPL3S | 402/402 (100 %) | 6 diff (98.6 %id) | |
BI827007 | brain, medulla | .c | 1 to 614 | 1 to 625 | 625/625 (100 %) | 17 diff (97.3 %id) | |||
BI826818 | brain, medulla | .c | 1 to 726 | 1 to 723 | 723/723 (100 %) | 4 diff (99.5 %id) | |||
CU013452 | Synthetic constructs | .a | 205 to 1156 | 19 to 970 | 952/985 (96 %) | 7 diff (99.3 %id) | |||
CU013164 | Synthetic constructs | .a | 205 to 1159 | 19 to 973 | exact | 955/988 (96 %) | 7 diff (99.3 %id) | ||
TI_57173055 | .c | 12 to 614 | 66 to 679 | 614/679 (90 %) | 6 diff (99.2 %id) | ||||
TI_57173107 | .c | 12 to 726 | 41 to 752 | 712/752 (94 %) | 9 diff (98.9 %id) | ||||
NM_006604.2 | .c | 1 to 1214 | 1 to 1214 | exact | RefSeq, | 1214/1214 (100 %) | 0 diff (100 %id) | ||
NM_001098535.1 | .a | 1 to 1488 | 1 to 1488 | exact | RefSeq, | 1488/1488 (100 %) | 0 diff (100 %id) | ||
TI_1948102985 | .c | 12 to 888 | 137 to 1017 | L81M F206S Q214P R215A V216R ... | fully sequenced, | 881/1017 (86 %) | 43 diff (95.8 %id) | ||
TI_1948102986 | .c | 590 to 891 | 431 to 118 | fully sequenced, | 314/431 (72 %) | 9 diff (98.0 %id) | |||
TI_1948103150 | .c | 173 to 884 | 833 to 110 | 724/1322 (54 %) | 23 diff (98.3 %id) | ||||
TI_1948103313 | .c | 12 to 887 | 137 to 1014 | L81M I269L N274K T278N D279G ... | fully sequenced, | 878/1014 (86 %) | 23 diff (97.8 %id) | ||
TI_1948103314 | .c | 298 to 884 | 707 to 121 | fully sequenced, | 587/707 (83 %) | 0 diff (100 %id) | |||
TI_1948103477 | .c | 12 to 573 | 132 to 706 | fully sequenced, | 575/706 (81 %) | 6 diff (99.2 %id) | |||
TI_1948103478 | .c | 543 to 891 | 455 to 106 | fully sequenced, | 350/455 (76 %) | 6 diff (98.7 %id) | |||
AK097738 | testis | .c | 298 to 884 | 707 to 121 | available from FLJ, | This clone was ignored | 587/707 (83 %) | 0 diff (100 %id) | |
DB442643. matches multiple genes | testis | .c | 12 to 573 | 132 to 706 | This clone was ignored, also hits gene RFPL2 | 575/706 (81 %) | 6 diff (99.2 %id) | ||
DB442643. matches multiple genes | testis | .c | 543 to 891 | 455 to 106 | This clone was ignored, also hits gene RFPL2 | 350/455 (76 %) | 6 diff (98.7 %id) | ||
DB507515. matches multiple genes | testis | Gene RFPL2, variant not shown | This clone was ignored, also hits gene RFPL2 | ||||||
DB507515. matches multiple genes | testis | Gene RFPL3, variant not shown | This clone was ignored, also hits gene RFPL2 | ||||||
DB448776 | testis | Gene RFPL3, variant not shown | This clone was ignored | ||||||
DB513933 | testis | Gene RFPL3, variant not shown | This clone was ignored | ||||||
DB457022 | testis | Gene RFPL3, variant not shown | This clone was ignored | ||||||
DB522460 | testis | Gene RFPL3, variant not shown | This clone was ignored | ||||||
DB457839 | testis | Gene RFPL3, variant not shown | This clone was ignored | ||||||
DB523330 | testis | Gene RFPL3, variant not shown | This clone was ignored | ||||||
DB459325. matches multiple genes | testis | Gene RFPL2, variant not shown | This clone was ignored, also hits gene RFPL2 | ||||||
DB459325. matches multiple genes | testis | Gene RFPL3, variant not shown | This clone was ignored, also hits gene RFPL2 | ||||||
DB524798. matches multiple genes | testis | Gene RFPL2, variant not shown | This clone was ignored, also hits gene RFPL2 | ||||||
DB524798. matches multiple genes | testis | Gene RFPL3, variant not shown | This clone was ignored, also hits gene RFPL2 | ||||||
DB049314 | testis | Gene RFPL3, variant not shown | capped | This clone was ignored | |||||
DB338450 | testis | Gene RFPL3, variant not shown | This clone was ignored |
? | Gene Summary | Gene on genome | mRNA:.a, .b-u, .c | Alternative mRNAs features, proteins, introns, exons, sequences | Expression Tissue | Function, regulation, related genes C |