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Gene RETTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
139 supporting clones for gene RET back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA235889 brain .a 1 to 512 2 to 513   tiling clone, capped   512/512
(100 %)
5 diff
(99.1 %id)
NM_020975.4   .a 42 to 5654 1 to 5613 exact RefSeq, AAA   5613/5613
(100 %)
3 diff
(100.0 %id)
DA100452 cerebellum .a 43 to 580 2 to 542   capped   541/541
(100 %)
5 diff
(99.1 %id)
DA128006 cerebellum .a 43 to 635 2 to 595   capped   594/594
(100 %)
2 diff
(99.7 %id)
BF206085 brain, neuroblastoma .a 51 to 311 1 to 261       261/273
(95 %)
5 diff
(98.2 %id)
BF207029 brain, neuroblastoma .a 51 to 311 1 to 261       261/273
(95 %)
5 diff
(98.2 %id)
BF314170 brain, neuroblastoma .a 51 to 311 1 to 259       259/271
(95 %)
8 diff
(97.1 %id)
BF316624 brain, neuroblastoma .a 51 to 311 1 to 261       261/274
(95 %)
7 diff
(97.5 %id)
BU858188 adenocarcinoma, cell line, breast .a 55 to 859 1 to 814   tiling clone,   814/879
(92 %)
19 diff
(97.9 %id)
AL527011.
matches multiple genes
brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 60 to 860 1 to 805     also hits gene RBM38 805/805
(100 %)
19 diff
(97.7 %id)
BX395256 Neuroblastoma Cot 50-normalized .a 60 to 1058 1 to 997       997/1003
(99 %)
13 diff
(98.8 %id)
BE263212 brain, neuroblastoma .a 70 to 303 1 to 231       231/231
(100 %)
9 diff
(96.2 %id)
BE260362 brain, neuroblastoma .a 71 to 304 1 to 240   available from MGC,   240/240
(100 %)
6 diff
(97.5 %id)
X15262   .a 83 to 1071 1 to 989       989/989
(100 %)
1 diff
(99.9 %id)
DA869510 Prostate .a 173 to 706 2 to 535   capped   534/534
(100 %)
1 diff
(99.9 %id)
CV026307 mixed .a 232 to 834 1 to 602       602/602
(100 %)
2 diff
(99.7 %id)
CV029905 mixed .a 232 to 718 1 to 487       487/487
(100 %)
22 diff
(95.5 %id)
TI_1948094679   .a 232 to 1014 130 to 917       788/1438
(54 %)
37 diff
(97.5 %id)
TI_1948149566   .a 232 to 1097 136 to 1000       865/1385
(62 %)
20 diff
(98.6 %id)
TI_1948149567   .a 232 to 1098 129 to 1006       878/1401
(62 %)
30 diff
(97.9 %id)
TI_1948149859   .a 232 to 1300 135 to 1207       1073/1441
(74 %)
49 diff
(96.6 %id)
TI_1948149860   .a 232 to 1099 128 to 1001       874/1311
(66 %)
46 diff
(96.5 %id)
TI_1948150155   .a 232 to 1096 136 to 1000       865/1436
(60 %)
18 diff
(98.8 %id)
TI_1948150156   .a 232 to 1106 124 to 999       876/1360
(64 %)
28 diff
(98.0 %id)
Y12528 neural crest .a 232 to 501 1 to 270       270/270
(100 %)
1 diff
(99.7 %id)
X12949   .a 413 to 4808 113 to 4508   tiling clone,   4396/4508
(97 %)
10 diff
(99.8 %id)
BF316589 brain, neuroblastoma .a 536 to 1199 1 to 653       653/914
(71 %)
21 diff
(97.8 %id)
CD630493   .a 539 to 1146 608 to 1       608/608
(100 %)
3 diff
(99.6 %id)
CD630494   .a 539 to 1146 1 to 607       605/608
(99 %)
5 diff
(99.2 %id)
BF314314 brain, neuroblastoma .a 591 to 1397 1 to 806       804/893
(90 %)
40 diff
(95.6 %id)
BF317043 brain, neuroblastoma .a 591 to 1262 1 to 678       678/873
(77 %)
26 diff
(97.1 %id)
BI196756 brain, neuroblastoma .a 591 to 1295 1 to 696       696/700
(99 %)
22 diff
(96.9 %id)
CD630490   .a 663 to 1146 1 to 483       483/484
(99 %)
8 diff
(98.4 %id)
CD630491   .a 663 to 952 1 to 291       291/504
(57 %)
7 diff
(98.7 %id)
CD630495   .a 663 to 1146 1 to 485       485/486
(99 %)
9 diff
(98.2 %id)
CD630498   .a 663 to 1146 1 to 484       484/485
(99 %)
7 diff
(98.6 %id)
CD630499   .a 663 to 1146 1 to 483       483/484
(99 %)
12 diff
(97.6 %id)
CD630502   .a 663 to 1146 1 to 484       484/485
(99 %)
6 diff
(98.8 %id)
CD630504   .a 663 to 1146 1 to 486       486/487
(99 %)
8 diff
(98.4 %id)
CD630506   .a 663 to 1146 1 to 484       484/485
(99 %)
7 diff
(98.6 %id)
CD630508   .a 663 to 1146 1 to 485       485/486
(99 %)
8 diff
(98.4 %id)
CD630489   .a 670 to 1146 476 to 1       476/483
(98 %)
3 diff
(99.4 %id)
CD630492   .a 670 to 1146 478 to 1       478/485
(98 %)
2 diff
(99.6 %id)
CD630496   .a 670 to 1146 477 to 1       477/484
(98 %)
2 diff
(99.6 %id)
CD630497   .a 670 to 1146 475 to 1       475/482
(98 %)
3 diff
(99.4 %id)
CD630500   .a 670 to 1146 476 to 1       476/483
(98 %)
7 diff
(98.6 %id)
CD630501   .a 670 to 1146 477 to 1       477/484
(98 %)
0 diff
(100 %id)
CD630503   .a 670 to 1146 476 to 1       476/483
(98 %)
1 diff
(99.8 %id)
CD630505   .a 670 to 1146 477 to 1       477/484
(98 %)
1 diff
(99.8 %id)
CD630507   .a 670 to 1146 476 to 1       476/483
(98 %)
2 diff
(99.6 %id)
DB040128 testis .a 965 to 1517 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
BG519723 brain, neuroblastoma .a 1061 to 1835 1 to 775       775/783
(98 %)
8 diff
(99.0 %id)
BF206153 brain, neuroblastoma .a 1061 to 1725 1 to 663       663/675
(98 %)
7 diff
(99.0 %id)
BE260166 brain, neuroblastoma .a 1097 to 1586 17 to 522       506/522
(96 %)
18 diff
(96.6 %id)
BX501190 Liver .a 1410 to 2143 1 to 734   tiling clone,   734/734
(100 %)
4 diff
(99.5 %id)
CX761336 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 1980 to 2710 40 to 769     Submitted on the opposite strand 730/769
(94 %)
3 diff
(99.7 %id)
BE693949 breast .a 2021 to 2217 198 to 1       198/199
(99 %)
10 diff
(95.0 %id)
BF311041 brain, neuroblastoma .a 2142 to 2818 1 to 665       665/894
(74 %)
24 diff
(97.4 %id)
BI195263 brain, neuroblastoma .a 2240 to 2953 1 to 713       713/713
(100 %)
13 diff
(98.2 %id)
BQ068473 brain, neuroblastoma, cell line .a 2240 to 2837 1 to 601       601/1010
(59 %)
9 diff
(99.2 %id)
BE314479 brain, neuroblastoma .a 2309 to 2974 18 to 690       673/838
(80 %)
30 diff
(96.5 %id)
AF395885   .a 2310 to 2614 143 to 447       305/447
(68 %)
7 diff
(98.5 %id)
M31213 papillary thyroid carcinoma .a 2362 to 5647 349 to 3639       3291/3642
(90 %)
43 diff
(98.9 %id)
DQ104207   .a 2366 to 3576 1121 to 2331       1211/2331
(51 %)
7 diff
(99.7 %id)
BQ070075 brain, neuroblastoma, cell line .a 2516 to 3271 1 to 757   tiling clone,   757/1029
(73 %)
29 diff
(97.2 %id)
BX283168 Kidney, renal cell adenocarcinoma .a 2615 to 3144 1 to 530       530/530
(100 %)
1 diff
(99.9 %id)
BX283511 brain, neuroblastoma .a 2615 to 3122 1 to 508       508/508
(100 %)
1 diff
(99.9 %id)
BF310396 brain, neuroblastoma .a 2615 to 3372 1 to 748       748/968
(77 %)
28 diff
(97.2 %id)
BE261669 brain, neuroblastoma .a 2635 to 3271 1 to 633       633/643
(98 %)
10 diff
(98.5 %id)
BE313267 brain, neuroblastoma .a 2635 to 3344 1 to 706       706/730
(96 %)
17 diff
(97.7 %id)
BE260609 brain, neuroblastoma .a 2636 to 3346 1 to 730       604/730
(82 %)
27 diff
(96.4 %id)
CD630488   .a 2784 to 3224 443 to 3       441/443
(99 %)
1 diff
(99.8 %id)
CD630487   .a 2790 to 3224 1 to 432       432/434
(99 %)
7 diff
(98.4 %id)
BF316920 brain, neuroblastoma .a 3225 to 3979 1 to 748       748/813
(92 %)
35 diff
(95.7 %id)
BI195797 brain, neuroblastoma .a 3225 to 3941 1 to 725       725/726
(99 %)
15 diff
(98.0 %id)
AL514642 neuroblastoma, placenta .a 3353 to 4422 1 to 1062       1062/1085
(97 %)
24 diff
(97.8 %id)
CA489570   .a 3411 to 4214 18 to 832   tiling clone,   815/967
(84 %)
36 diff
(96.3 %id)
BQ279180 adenocarcinoma, cell line, breast .a 3644 to 4149 1 to 508       508/1002
(50 %)
5 diff
(99.6 %id)
F07297 brain, total brain .a 4083 to 4412 1 to 330       330/330
(100 %)
3 diff
(99.1 %id)
BF311917 brain, neuroblastoma .a 4141 to 4890 1 to 748       748/760
(98 %)
11 diff
(98.6 %id)
BX451803 neuroblastoma .a 4170 to 5098 1 to 928   tiling clone,   928/930
(99 %)
9 diff
(99.1 %id)
BX451802 neuroblastoma .a 4178 to 5098 11 to 924       914/925
(98 %)
6 diff
(99.4 %id)
BQ720918 sympathetic trunk .a 4207 to 5056 1 to 860       860/861
(99 %)
30 diff
(96.6 %id)
AL514641 neuroblastoma, placenta .a 4782 to 5658 872 to 1       872/899
(96 %)
39 diff
(95.7 %id)
FN106680 breast carcinoma .a 4863 to 4960 98 to 1     Submitted on the opposite strand 98/100
(98 %)
0 diff
(100 %id)
AA319595 adrenal gland .a 4932 to 5255 1 to 330   tiling clone,   330/374
(88 %)
8 diff
(97.9 %id)
AW949397   .a 4933 to 5451 1 to 519       519/519
(100 %)
2 diff
(99.7 %id)
CB050374 Prostate .a 5159 to 5654 539 to 43   AAA   497/497
(100 %)
1 diff
(99.8 %id)
AJ844649   .a 5161 to 5367 1 to 207       207/207
(100 %)
0 diff
(100 %id)
AI263439 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 5181 to 5658 478 to 1   tiling clone,   478/478
(100 %)
0 diff
(100 %id)
AI204150   .a 5211 to 5657 447 to 1       447/447
(100 %)
0 diff
(100 %id)
FN165452 breast carcinoma .a 5239 to 5351 115 to 1     Submitted on the opposite strand 115/115
(100 %)
3 diff
(97.4 %id)
AA903339 leiomyosarcoma, soft tissue .a 5267 to 5658 396 to 5       392/396
(98 %)
0 diff
(100 %id)
AW628757 pooled .a 5276 to 5654 381 to 1       381/381
(100 %)
2 diff
(99.5 %id)
AA716772 heart .a 5277 to 5658 382 to 1       382/382
(100 %)
0 diff
(100 %id)
AI167534 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 5339 to 5655 317 to 1       317/317
(100 %)
0 diff
(100 %id)
FN067650 breast carcinoma .a 5366 to 5482 117 to 1     Submitted on the opposite strand 117/117
(100 %)
0 diff
(100 %id)
FN072397 breast carcinoma .a 5370 to 5439 69 to 1     Submitted on the opposite strand 69/70
(98 %)
1 diff
(98.6 %id)
F03561 brain, total brain .a 5452 to 5654 203 to 1       203/208
(97 %)
2 diff
(99.1 %id)
NM_020630.4   .b 1 to 4159 1 to 4159 exact RefSeq, AAA   4159/4159
(100 %)
4 diff
(100.0 %id)
BX353743 Neuroblastoma Cot 25-normalized .b 3 to 912 1 to 910       910/910
(100 %)
15 diff
(98.4 %id)
BC004257 Brain, neuroblastoma .b 11 to 3476 1 to 3466 G691S R982C tiling clone, available from MGC, AAA   3466/3466
(100 %)
6 diff
(99.9 %id)
BX332520 Neuroblastoma Cot 25-normalized .b 19 to 1014 1 to 990       990/1016
(97 %)
17 diff
(98.4 %id)
AK291807 Prostate .b 131 to 3476 1 to 3346 A664S tiling clone,   3346/3346
(100 %)
2 diff
(100.0 %id)
AL523813 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .b 1769 to 2795 1 to 1014       1014/1014
(100 %)
17 diff
(98.4 %id)
BX387509 Neuroblastoma Cot 25-normalized .b 1923 to 2893 1 to 959       959/961
(99 %)
21 diff
(97.9 %id)
M16029   .b 1944 to 3476 954 to 2485       1532/2485
(61 %)
10 diff
(99.6 %id)
L03357 thyroid tumor .b 2326 to 3476 717 to 1867       1151/1867
(61 %)
9 diff
(99.6 %id)
X56348   .b 2326 to 3476 418 to 1568       1151/1568
(73 %)
6 diff
(99.7 %id)
BX333160 Neuroblastoma Cot 25-normalized .b 2465 to 3454 993 to 7       987/1107
(89 %)
22 diff
(98.1 %id)
TI_1948149568   .b 2473 to 3408 1056 to 128       929/1253
(74 %)
17 diff
(98.7 %id)
TI_1948149861   .b 2473 to 3408 1063 to 129       935/1289
(72 %)
13 diff
(99.0 %id)
TI_1948149569   .b 2475 to 3408 1061 to 130       932/1281
(72 %)
24 diff
(98.2 %id)
TI_1948150157   .b 2475 to 3408 1062 to 128       935/1285
(72 %)
13 diff
(99.0 %id)
TI_1948150158   .b 2475 to 3408 1065 to 130       936/1259
(74 %)
15 diff
(98.9 %id)
TI_1948149862   .b 2477 to 3408 1062 to 129       934/1283
(72 %)
18 diff
(98.6 %id)
H24996 breast .b 2773 to 3042 1 to 270       270/270
(100 %)
0 diff
(100 %id)
AL562269 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .b 3002 to 4096 1091 to 1   tiling clone,   1091/1098
(99 %)
15 diff
(98.7 %id)
BI194291 epithelioid carcinoma cell line, Pancreas .b 3032 to 3685 1 to 653       653/668
(97 %)
13 diff
(98.1 %id)
BX332519 Neuroblastoma Cot 25-normalized .b 3035 to 4087 1044 to 1       1044/1064
(98 %)
27 diff
(97.5 %id)
H24956 breast .b 3056 to 3445 392 to 1       390/399
(97 %)
12 diff
(97.0 %id)
BX387508 Neuroblastoma Cot 25-normalized .b 3135 to 4107 969 to 1       969/969
(100 %)
9 diff
(99.1 %id)
AW467850 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .b 3272 to 3476 203 to 1       203/203
(100 %)
6 diff
(97.1 %id)
BI196494 brain, neuroblastoma .b 3294 to 3879 1 to 601       601/871
(69 %)
17 diff
(98.1 %id)
BE261914 brain, neuroblastoma .b 3314 to 4032 1 to 715       715/811
(88 %)
17 diff
(98.0 %id)
BX353742 Neuroblastoma Cot 25-normalized .b 3456 to 4086 633 to 4       630/921
(68 %)
0 diff
(100 %id)
TI_154090216   .b 3592 to 4119 643 to 115   AAA   529/530
(99 %)
36 diff
(93.3 %id)
BM703293 eye, human retina .b 3607 to 4151 1 to 545       545/545
(100 %)
1 diff
(99.9 %id)
AW748777 breast .b 3643 to 3906 264 to 1       264/264
(100 %)
17 diff
(93.6 %id)
AW297789   .b 3649 to 4159 528 to 18   tiling clone, AAA   511/511
(100 %)
1 diff
(99.9 %id)
AA983685 pooled .b 3697 to 4126 435 to 7       429/435
(98 %)
0 diff
(100 %id)
AI472270 pooled .b 3784 to 4159 391 to 16   AAA   376/376
(100 %)
3 diff
(99.3 %id)
AI825524 pooled germ cell tumors .b 3901 to 4171 271 to 1   tiling clone,   271/271
(100 %)
1 diff
(99.7 %id)
DC351179 brain .c 1 to 577 1 to 575   tiling clone,   575/575
(100 %)
1 diff
(99.9 %id)
AK294827 brain .c 184 to 3171 1 to 2988   tiling clone,   2988/2988
(100 %)
5 diff
(99.9 %id)
DC321930 brain .c 184 to 722 1 to 540       540/540
(100 %)
2 diff
(99.7 %id)
BF312025 brain, neuroblastoma .d 1 to 496 1 to 501 R57G D64R G65W K66Q G67S ... tiling clone,   501/675
(74 %)
15 diff
(97.8 %id)
BM661773 eye, Retina Foveal and Macular Gene RET, variant not shown       fully sequenced, AAA Suspected internal deletion, this clone was ignored    
BM690055 eye, Retina Foveal and Macular Gene RET, variant not shown       fully sequenced, AAA Suspected internal deletion, this clone was ignored    
BX376396 Neuroblastoma Cot 25-normalized Gene RET, variant not shown         This clone was ignored    
BX376397 Neuroblastoma Cot 25-normalized Gene RET, variant not shown         This clone was ignored    
DA911581   Gene RET, variant not shown       capped This clone was ignored    
DB331428   Gene RET, variant not shown         This clone was ignored    
BC003072 Brain, neuroblastoma Gene RET, variant not shown       available from MGC, AAA This clone was ignored    
BI195132 brain, neuroblastoma Gene RET, variant not shown         Suspected internal deletion, this clone was ignored    
TI_1948094235   Gene RET, variant not shown         This clone was ignored    
TI_1948094236   Gene RET, variant not shown         This clone was ignored    
TI_1948094378   Gene RET, variant not shown       fully sequenced, This clone was ignored    
TI_1948094379   Gene RET, variant not shown       fully sequenced, This clone was ignored    
TI_1948094526   Gene RET, variant not shown       fully sequenced, This clone was ignored    
TI_1948094527   Gene RET, variant not shown       fully sequenced, This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI