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Gene RBKSTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
126 supporting clones for gene RBKS back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CB958737 Pooled-Glandular .a 1 to 574 1 to 578   tiling clone,   578/780
(74 %)
14 diff
(98.3 %id)
TI_151770667   .a 15 to 519 103 to 607   fully sequenced,   505/505
(100 %)
0 diff
(100 %id)
BC017425 lung .a 20 to 1164 1 to 1145 exact available from MGC, AAA   1145/1145
(100 %)
3 diff
(99.8 %id)
BG541103 lung .a 23 to 679 1 to 666       664/769
(86 %)
10 diff
(98.7 %id)
AY643715   .a 30 to 1169 1 to 1140 T101A     1140/1140
(100 %)
1 diff
(100.0 %id)
DB481956 hippocampus .a 33 to 510 1 to 479       479/479
(100 %)
2 diff
(99.6 %id)
CN309700 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 44 to 528 1 to 485       485/485
(100 %)
0 diff
(100 %id)
BF239609 bone marrow, from chronic myelogenous leukemia .a 46 to 467 1 to 419       419/420
(99 %)
23 diff
(94.6 %id)
CD699214 normal nasopharynx .a 48 to 687 19 to 658       640/660
(96 %)
7 diff
(99.0 %id)
AA348964 adrenal gland .a 56 to 385 1 to 332       332/332
(100 %)
3 diff
(99.1 %id)
BG401292 Kidney .a 61 to 685 1 to 615       615/873
(70 %)
16 diff
(98.2 %id)
AJ404857   .a 62 to 1257 1 to 1196 exact tiling clone,   1196/1196
(100 %)
0 diff
(100 %id)
CN309699 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 62 to 417 1 to 356       356/356
(100 %)
2 diff
(99.5 %id)
NM_022128.1   .a 62 to 1257 1 to 1196 exact RefSeq,   1196/1196
(100 %)
0 diff
(100 %id)
EL733561 mixed .a 73 to 707 1 to 635       635/635
(100 %)
2 diff
(99.7 %id)
T69099 Liver .a 73 to 400 17 to 355       339/355
(95 %)
12 diff
(96.7 %id)
TI_1948242472   .a 73 to 194 134 to 255       122/150
(81 %)
6 diff
(96.0 %id)
TI_1948242473   .a 73 to 835 128 to 892       765/1402
(54 %)
21 diff
(98.6 %id)
TI_1948242759   .a 73 to 1039 137 to 1103       967/1405
(68 %)
24 diff
(98.3 %id)
TI_1948242760   .a 73 to 868 130 to 925       796/1376
(57 %)
18 diff
(98.7 %id)
TI_1948243045   .a 73 to 1039 141 to 1112       972/1390
(69 %)
45 diff
(96.8 %id)
TI_1948243046   .a 73 to 972 130 to 1029       900/1373
(65 %)
36 diff
(97.4 %id)
TI_1948243336   .a 73 to 1046 139 to 1113 V223L G237R E250*     975/1398
(69 %)
48 diff
(96.6 %id)
TI_1948243337   .a 73 to 991 130 to 1050       921/1408
(65 %)
33 diff
(97.7 %id)
CN309698 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 74 to 624 1 to 551       551/551
(100 %)
1 diff
(99.9 %id)
H82518 eye, retina .a 177 to 335 1 to 160       160/160
(100 %)
2 diff
(98.8 %id)
TI_1948243338   .a 179 to 1040 1006 to 128       875/1325
(66 %)
34 diff
(97.5 %id)
DT217121 brain .a 187 to 315 1 to 129       129/129
(100 %)
0 diff
(100 %id)
TI_1948243047   .a 211 to 1040 979 to 131       807/1379
(58 %)
21 diff
(98.5 %id)
TI_1948242761   .a 287 to 1040 890 to 130       761/1380
(55 %)
18 diff
(98.7 %id)
CR609030 placenta .a 289 to 1084 1 to 796       796/796
(100 %)
0 diff
(100 %id)
AL541409 placenta .a 290 to 868 579 to 1       579/579
(100 %)
1 diff
(99.9 %id)
TI_1948242762   .a 290 to 1040 880 to 123       758/1281
(59 %)
14 diff
(99.0 %id)
AW292445   .a 293 to 550 37 to 294     Submitted on the opposite strand 260/294
(88 %)
11 diff
(96.3 %id)
N74761 liver and spleen .a 345 to 567 1 to 222       222/222
(100 %)
2 diff
(99.1 %id)
BM833322 stomach .a 380 to 805 1 to 425       425/425
(100 %)
1 diff
(99.8 %id)
BG192527   .a 389 to 1122 733 to 1     Submitted on the opposite strand 733/733
(100 %)
8 diff
(99.0 %id)
TI_154091021   .a 425 to 1117 781 to 90   AAA   692/903
(76 %)
1 diff
(99.9 %id)
CA434266 lung, Metastatic Chondrosarcoma .a 425 to 1117 710 to 19   AAA   692/705
(98 %)
1 diff
(99.9 %id)
TI_1948242475   .a 436 to 1040 718 to 111       606/1222
(49 %)
32 diff
(97.4 %id)
AW467020 2 pooled tumors (clear cell type), Kidney .a 485 to 1116 648 to 17   AAA   632/633
(99 %)
5 diff
(99.3 %id)
TI_151746169   .a 489 to 1054 632 to 67   fully sequenced,   566/632
(89 %)
1 diff
(99.9 %id)
BQ016020 lung, Metastatic Chondrosarcoma .a 491 to 1117 642 to 16   AAA   627/627
(100 %)
0 diff
(100 %id)
FN059675 breast carcinoma .a 496 to 561 66 to 1     Submitted on the opposite strand 66/67
(98 %)
0 diff
(100 %id)
AI823980 2 pooled tumors (clear cell type), Kidney .a 499 to 1118 620 to 1       620/620
(100 %)
1 diff
(99.9 %id)
BE221723 Kidney .a 508 to 1083 576 to 1       576/576
(100 %)
0 diff
(100 %id)
BE501861 Kidney .a 519 to 1083 565 to 1       565/565
(100 %)
0 diff
(100 %id)
AI912209 carcinoid, lung .a 556 to 1024 1 to 469     Submitted on the opposite strand 469/469
(100 %)
0 diff
(100 %id)
BE218181 carcinoid, lung .a 556 to 1036 1 to 481     Submitted on the opposite strand 481/481
(100 %)
0 diff
(100 %id)
AW800659 uterus .a 582 to 908 693 to 367       327/750
(43 %)
9 diff
(98.8 %id)
AW972520   .a 582 to 1163 582 to 1     Submitted on the opposite strand 582/596
(97 %)
3 diff
(99.5 %id)
R16478 liver and spleen .a 583 to 833 1 to 257   fully sequenced,   257/257
(100 %)
8 diff
(96.9 %id)
AI261736 Kidney .a 586 to 1164 579 to 1       579/579
(100 %)
7 diff
(98.8 %id)
TI_1948243339   .a 586 to 1038 603 to 151       453/1388
(32 %)
5 diff
(99.7 %id)
AA705408 liver and spleen .a 601 to 1098 499 to 3       497/499
(99 %)
2 diff
(99.6 %id)
AI343781 2 pooled tumors (clear cell type), Kidney .a 601 to 1080 482 to 3       480/482
(99 %)
0 diff
(100 %id)
AA836840 Kidney, kidney tumor .a 607 to 1092 486 to 1       486/486
(100 %)
0 diff
(100 %id)
AA989445 2 pooled tumors (clear cell type), Kidney .a 615 to 1084 472 to 4       469/476
(98 %)
7 diff
(98.6 %id)
AI669241 Prostate .a 622 to 1080 460 to 2       459/460
(99 %)
0 diff
(100 %id)
AI343945 colon, colon tumor, RER+ .a 631 to 1082 453 to 1       453/453
(100 %)
4 diff
(99.2 %id)
AA702850 liver and spleen .a 646 to 786 142 to 1       142/142
(100 %)
2 diff
(98.6 %id)
AI266440 2 pooled tumors (clear cell type), Kidney .a 652 to 1084 436 to 4       433/436
(99 %)
1 diff
(99.8 %id)
AI203169 pooled germ cell tumors .a 659 to 1083 425 to 1       425/426
(99 %)
3 diff
(99.3 %id)
AA393609   .a 677 to 1074 7 to 403       397/403
(98 %)
7 diff
(98.3 %id)
AI830483 Kidney .a 677 to 1097 451 to 31   AAA   421/428
(98 %)
5 diff
(98.9 %id)
AA505744 breast .a 679 to 1164 486 to 1       486/486
(100 %)
6 diff
(98.8 %id)
N52515 liver and spleen .a 697 to 1166 476 to 2       475/478
(99 %)
7 diff
(98.6 %id)
T69020 Liver .a 717 to 1163 449 to 1       449/454
(98 %)
4 diff
(99.2 %id)
AW466943 2 pooled tumors (clear cell type), Kidney .a 733 to 1118 387 to 2       386/387
(99 %)
0 diff
(100 %id)
BF197524 Kidney .a 736 to 1077 341 to 1       341/341
(100 %)
12 diff
(96.5 %id)
DB550811 hippocampus .a 741 to 1256 1 to 516     Submitted on the opposite strand 516/516
(100 %)
3 diff
(99.5 %id)
AA037228 uterus .a 748 to 1257 512 to 1       512/513
(99 %)
2 diff
(99.7 %id)
BM717190 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 766 to 1169 1 to 404   AAA   404/404
(100 %)
0 diff
(100 %id)
H82519 eye, retina .a 799 to 1152 354 to 1       354/354
(100 %)
0 diff
(100 %id)
R16778 liver and spleen .a 803 to 1084 288 to 2   fully sequenced,   287/288
(99 %)
3 diff
(99.0 %id)
AW292323   .a 808 to 1083 293 to 18   AAA   276/286
(96 %)
0 diff
(100 %id)
BF939632 Kidney .a 841 to 1084 254 to 4       251/254
(98 %)
0 diff
(100 %id)
AA860865 parathyroid gland, parathyroid tumor .a 861 to 1097 258 to 22   AAA   237/237
(100 %)
0 diff
(100 %id)
BG194794   .a 862 to 1076 9 to 222   AAA   214/222
(96 %)
6 diff
(97.3 %id)
BG214800   .a 862 to 1117 1 to 254   AAA   254/255
(99 %)
5 diff
(98.1 %id)
BG218404   .a 862 to 1072 30 to 261   AAA   232/261
(88 %)
56 diff
(78.6 %id)
BG205881   .a 864 to 1083 1 to 219   AAA   219/219
(100 %)
4 diff
(98.2 %id)
BG187307   .a 866 to 1169 59 to 362       304/362
(83 %)
6 diff
(98.4 %id)
BG201690   .a 866 to 1169 1 to 304   AAA   304/304
(100 %)
2 diff
(99.4 %id)
BG214801   .a 867 to 1083 10 to 226   AAA   217/226
(96 %)
6 diff
(97.4 %id)
BG195051   .a 868 to 1082 14 to 228   AAA   215/228
(94 %)
6 diff
(97.4 %id)
BG200675   .a 868 to 1082 14 to 228   AAA   215/228
(94 %)
6 diff
(97.4 %id)
BG203762   .a 868 to 1116 14 to 263   AAA   250/263
(95 %)
6 diff
(97.8 %id)
BG213210   .a 868 to 1116 12 to 260   AAA   249/260
(95 %)
6 diff
(97.7 %id)
BG220975   .a 868 to 1117 12 to 260   AAA   249/260
(95 %)
6 diff
(97.7 %id)
BG211608   .a 875 to 1121 1 to 247       247/247
(100 %)
3 diff
(98.8 %id)
BG197071   .a 878 to 1063 15 to 199       185/220
(84 %)
1 diff
(99.6 %id)
BG199123   .a 892 to 1084 1 to 195       195/207
(94 %)
5 diff
(97.6 %id)
AA975871 Kidney .a 900 to 1084 189 to 5       185/189
(97 %)
0 diff
(100 %id)
AI452781 pooled .a 921 to 1164 263 to 20   AAA   244/244
(100 %)
0 diff
(100 %id)
EH344972   .a 1034 to 1115 1 to 82       82/82
(100 %)
0 diff
(100 %id)
AK300989 small intestine .b 1 to 1547 1 to 1548 exact tiling clone,   1548/1548
(100 %)
1 diff
(100.0 %id)
BF034279 adenocarcinoma, ovary .b 425 to 1159 1 to 738       738/743
(99 %)
24 diff
(96.8 %id)
AI629006 Kidney .b 525 to 1145 621 to 6       616/621
(99 %)
9 diff
(98.6 %id)
AI310153 2 pooled tumors (clear cell type), Kidney .b 585 to 1145 567 to 6       562/567
(99 %)
5 diff
(99.2 %id)
BX648909 human cerebellum .c 1 to 2155 1 to 2155 K80Q Q163R tiling clone, available from DKFZ, AAA   2155/2155
(100 %)
8 diff
(99.7 %id)
BG203279   .c 1928 to 2335 1 to 407   AAA   407/407
(100 %)
10 diff
(97.6 %id)
BG201691   .c 1933 to 2722 1 to 789   tiling clone,   789/789
(100 %)
5 diff
(99.4 %id)
BG205340   .c 1938 to 2719 22 to 805       784/813
(96 %)
42 diff
(94.9 %id)
AA844174 parathyroid gland, parathyroid tumor .c 1971 to 2359 396 to 9       388/396
(97 %)
0 diff
(100 %id)
BF436282 pooled .c 2017 to 2361 350 to 6       345/350
(98 %)
0 diff
(100 %id)
AW889132 nervous_tumor .c 2202 to 2393 9 to 200       192/213
(90 %)
6 diff
(97.2 %id)
BQ639487 eye, retina .c 2237 to 2810 574 to 1   tiling clone, Submitted on the opposite strand 574/595
(96 %)
0 diff
(100 %id)
NR_028308.1   .d-u 1 to 1656 2 to 1657 exact RefSeq, tiling clone, AAA   1657/1657
(100 %)
0 diff
(100 %id)
DA582634 lung .d-u 1 to 421 2 to 422   capped   421/421
(100 %)
1 diff
(99.8 %id)
CD671167 eye, Iris .d-u 9 to 617 1 to 609       609/609
(100 %)
0 diff
(100 %id)
BM543808 ovary (pool of 3) .d-u 13 to 705 32 to 733       702/1215
(57 %)
7 diff
(99.5 %id)
BG697021 skin .d-u 16 to 923 1 to 907       907/907
(100 %)
8 diff
(99.2 %id)
CD515982 White Matter .d-u 19 to 935 1 to 926       926/926
(100 %)
43 diff
(95.4 %id)
CD518288 White Matter .d-u 24 to 763 1 to 748       748/872
(85 %)
16 diff
(98.2 %id)
BF972623 leiomyosarcoma cell line, uterus .d-u 25 to 566 1 to 550   available from MGC,   550/797
(69 %)
25 diff
(96.9 %id)
BC014088 Uterus, leiomyosarcoma .d-u 26 to 1286 1 to 1261 exact available from MGC, AAA   1261/1261
(100 %)
0 diff
(100 %id)
BM714050 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d-u 246 to 800 1 to 555   fully sequenced,   555/555
(100 %)
1 diff
(99.9 %id)
CD513436 brain, Pituitary .d-u 272 to 1033 1 to 771       771/961
(80 %)
22 diff
(97.8 %id)
TI_151745244   .d-u 640 to 1299 751 to 92 K7I P8A S9F A10S Y11L ...     660/996
(66 %)
0 diff
(100 %id)
BU621759 cell lines, Chondrosarcoma .d-u 683 to 1286 623 to 19 R89Q V90G V91C V92C R93E ... AAA   605/605
(100 %)
2 diff
(99.7 %id)
CD671166 eye, Iris .d-u 719 to 1286 584 to 17 S6L AAA   568/568
(100 %)
1 diff
(99.9 %id)
BM675235 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d-u 770 to 1286 536 to 19 R89Q V90G V91C V92C R93E ... fully sequenced, AAA   518/518
(100 %)
3 diff
(99.5 %id)
CR741591 brain, tumor, 5 pooled (see description) .d-u 829 to 1286 472 to 15 exact AAA   458/458
(100 %)
0 diff
(100 %id)
AI434553 lymph node, lymphoma, follicular mixed small and largecell .d-u 908 to 1288 383 to 3 exact     381/383
(99 %)
0 diff
(100 %id)
AW080339 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .d-u 1011 to 1467 457 to 1       457/457
(100 %)
3 diff
(99.4 %id)
CN309697 embryonic stem cells, DMSO-treated H9 cellline .e 1 to 739 1 to 739 exact tiling clone,   739/739
(100 %)
1 diff
(99.9 %id)
CB154825 brain .f 1 to 630 1 to 630 exact tiling clone,   630/630
(100 %)
3 diff
(99.6 %id)
AA037250.
matches multiple genes
uterus .g 1 to 484 1 to 490 exact tiling clone, also hits gene RIN2 490/490
(100 %)
7 diff
(98.6 %id)
AV657234 corresponding non cancerous liver tissue Gene RBKS, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
BE048203 brain, tumor, 5 pooled (see description) Gene RBKS, variant not shown         Suspected internal deletion, this clone was ignored    
AI863352 brain, tumor, 5 pooled (see description) Gene RBKS, variant not shown         Suspected internal deletion, this clone was ignored    
BE048215 brain, tumor, 5 pooled (see description) Gene RBKS, variant not shown         Suspected internal deletion, this clone was ignored    
AI863361 brain, tumor, 5 pooled (see description) Gene RBKS, variant not shown         Suspected internal deletion, this clone was ignored    
DA929008 small intestine Gene RBKS, variant not shown       capped This clone was ignored    
DB332239 small intestine Gene RBKS, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e, .f, .g Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C