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Gene RASL11BTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
135 supporting clones for gene RASL11B back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CR610178 Placenta Cot 25-normalized .a 1 to 1843 1 to 1843 exact tiling clone,   1843/1843
(100 %)
0 diff
(100 %id)
BG703039 brain, hippocampus .a 23 to 650 1 to 625       625/625
(100 %)
5 diff
(99.2 %id)
BG704197 brain, hippocampus .a 23 to 740 1 to 725       725/907
(79 %)
14 diff
(98.5 %id)
BG724061 testis .a 23 to 616 1 to 594       594/594
(100 %)
4 diff
(99.4 %id)
AK027267 whole embryo, mainly head .a 28 to 1994 1 to 1966 L3H V50L available from FLJ,   1966/1966
(100 %)
10 diff
(99.5 %id)
AK314942 brain .a 28 to 965 1 to 938 exact     938/938
(100 %)
0 diff
(100 %id)
AY839725   .a 28 to 1988 1 to 1961 exact tiling clone, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 1961/1961
(100 %)
0 diff
(100 %id)
AY839726   .a 28 to 793 1 to 766   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 766/777
(98 %)
1 diff
(99.9 %id)
CF993831 Human Placenta, placenta .a 28 to 677 28 to 682       655/768
(85 %)
14 diff
(98.2 %id)
DA519583 brain .a 29 to 588 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA568236 whole embryo, mainly head .a 29 to 752 2 to 728   capped   727/729
(99 %)
16 diff
(97.9 %id)
DA703826   .a 29 to 485 2 to 458   capped   457/457
(100 %)
1 diff
(99.8 %id)
BX441045 brain, fetal brain .a 30 to 982 31 to 980 T47X S99X L238S S239L A240P ...     950/980
(96 %)
7 diff
(99.3 %id)
BX419662 brain, fetal brain .a 30 to 986 30 to 984 V242S R243E T244D V245C T246H ...     955/984
(97 %)
7 diff
(99.3 %id)
BX338460 Placenta Cot 25-normalized .a 30 to 987 30 to 974 N6X D23E T47N Q73X Q84X ... fully sequenced,   945/974
(97 %)
15 diff
(98.5 %id)
BX360261 Placenta Cot 25-normalized .a 30 to 1103 30 to 1089 R144G L145C P146L V147W V148W ...     1060/1089
(97 %)
25 diff
(97.8 %id)
BQ067466 pooled brain, lung, testis .a 30 to 721 11 to 709       699/1157
(60 %)
19 diff
(98.4 %id)
BQ219818 brain .a 30 to 908 10 to 890       881/899
(97 %)
15 diff
(98.4 %id)
BM928456 brain .a 30 to 786 10 to 772       763/1167
(65 %)
26 diff
(97.8 %id)
BM906794 ovary (pool of 3) .a 31 to 935 1 to 911       911/1149
(79 %)
30 diff
(97.4 %id)
DA699054   .a 31 to 367 2 to 338   capped   337/337
(100 %)
0 diff
(100 %id)
TI_57147103   .a 32 to 708 29 to 706       678/710
(95 %)
14 diff
(98.1 %id)
BM906383 ovary (pool of 3) .a 34 to 660 5 to 633       629/1208
(52 %)
28 diff
(97.7 %id)
TI_57240122   .a 36 to 850 24 to 843       820/844
(97 %)
17 diff
(98.0 %id)
TI_57243369   .a 36 to 755 32 to 757       724/759
(95 %)
24 diff
(96.9 %id)
BX423435 brain, fetal brain .a 38 to 1011 1 to 962 V201X N226X M227X Q228R D229T ...     962/979
(98 %)
23 diff
(97.7 %id)
BX460822 brain, fetal brain .a 38 to 982 1 to 941 exact     941/941
(100 %)
7 diff
(99.3 %id)
BF204013 muscle, rhabdomyosarcoma .a 38 to 495 1 to 458       458/458
(100 %)
1 diff
(99.8 %id)
BG827850 muscle, rhabdomyosarcoma .a 38 to 883 1 to 857       857/859
(99 %)
33 diff
(96.2 %id)
BC001087 Muscle, rhabdomyosarcoma .a 39 to 1988 1 to 1950 exact available from MGC, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 1950/1950
(100 %)
0 diff
(100 %id)
BC001846 Muscle, rhabdomyosarcoma .a 39 to 1988 1 to 1950   available from MGC, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 1950/1950
(100 %)
0 diff
(100 %id)
CR599114 fetal brain .a 39 to 1948 1 to 1910 exact     1910/1910
(100 %)
0 diff
(100 %id)
AW411124 muscle, rhabdomyosarcoma .a 39 to 469 10 to 440     Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 431/440
(97 %)
6 diff
(98.7 %id)
BI761366 pooled colon, kidney, stomach .a 39 to 306 1 to 270       270/270
(100 %)
4 diff
(98.6 %id)
BM805105 ovary (pool of 3) .a 39 to 783 1 to 749       749/1107
(67 %)
17 diff
(98.5 %id)
NM_023940.2   .a 39 to 1988 1 to 1950 exact RefSeq, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 1950/1950
(100 %)
0 diff
(100 %id)
BC025694 Lung, Spleen, fetal, pooled .a 40 to 1988 1 to 1949 exact available from MGC, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 1949/1949
(100 %)
1 diff
(100.0 %id)
BI771492 pooled lung and spleen .a 40 to 306 1 to 265       265/265
(100 %)
2 diff
(99.3 %id)
BQ219742 brain .a 40 to 893 1 to 860       860/872
(98 %)
24 diff
(97.3 %id)
TI_57182882   .a 40 to 649 34 to 642       609/642
(94 %)
8 diff
(98.8 %id)
CN311032 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 41 to 606 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
BG825795 muscle, rhabdomyosarcoma .a 41 to 505 1 to 466       466/466
(100 %)
6 diff
(98.8 %id)
CX754018 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 41 to 811 34 to 800     Submitted on the opposite strand 767/801
(95 %)
12 diff
(98.6 %id)
CX751343 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 41 to 590 41 to 591     Submitted on the opposite strand 551/733
(75 %)
40 diff
(94.6 %id)
DR000921 fetal brain .a 41 to 799 1 to 758       758/758
(100 %)
6 diff
(99.3 %id)
CN311031 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 42 to 703 1 to 662       662/662
(100 %)
0 diff
(100 %id)
BI752739 brain .a 42 to 302 1 to 266       266/267
(99 %)
7 diff
(97.4 %id)
BM547920 brain, hippocampus .a 42 to 764 15 to 740       726/1160
(62 %)
9 diff
(99.3 %id)
BM547922 brain, hippocampus .a 42 to 988 18 to 974 H195P H203P S208T T216N S217L ...     957/1065
(89 %)
38 diff
(96.5 %id)
TI_57219576   .a 42 to 780 29 to 796       768/798
(96 %)
49 diff
(93.9 %id)
BM927325 brain .a 43 to 838 1 to 799       799/1080
(73 %)
21 diff
(98.1 %id)
BX345529 Neuroblastoma Cot 25-normalized .a 44 to 913 1 to 866       866/866
(100 %)
4 diff
(99.6 %id)
BX385726 Neuroblastoma Cot 25-normalized .a 44 to 929 1 to 882       882/882
(100 %)
14 diff
(98.5 %id)
BI916647 brain .a 44 to 306 1 to 266       266/266
(100 %)
4 diff
(98.5 %id)
BI918230 brain .a 44 to 303 1 to 258       258/258
(100 %)
3 diff
(98.9 %id)
BQ068172 brain .a 50 to 941 1 to 905       905/959
(94 %)
12 diff
(98.8 %id)
BX420739 brain, fetal brain .a 52 to 1138 1 to 1070 exact     1070/1088
(98 %)
23 diff
(97.9 %id)
AL583567 brain, fetal brain .a 54 to 1096 27 to 1050 C25X V44W G45A K46R T47P ...     1024/1078
(94 %)
26 diff
(97.6 %id)
CD243858 testis .a 63 to 884 1 to 829       829/883
(93 %)
12 diff
(98.7 %id)
TI_43960826   .a 77 to 662 59 to 648       590/648
(91 %)
10 diff
(98.5 %id)
BI490009 pooled brain, lung, testis .a 84 to 306 1 to 223       223/223
(100 %)
0 diff
(100 %id)
BM544024 ovary (pool of 3) .a 189 to 935 65 to 818       754/1210
(62 %)
17 diff
(98.6 %id)
BI915948 brain .a 232 to 302 200 to 275       256/275
(93 %)
24 diff
(91.3 %id)
TI_57238927   .a 232 to 710 235 to 719       667/719
(92 %)
33 diff
(95.5 %id)
AA336400 endometrium .a 407 to 677 1 to 273       273/276
(98 %)
5 diff
(98.2 %id)
AA337449 endometrium .a 407 to 672 1 to 266       266/266
(100 %)
0 diff
(100 %id)
AW966185   .a 408 to 896 1 to 490       490/490
(100 %)
16 diff
(96.8 %id)
BX338459 Placenta Cot 25-normalized .a 957 to 1965 1002 to 1   fully sequenced,   1002/1002
(100 %)
15 diff
(98.6 %id)
R66047 placenta .a 1278 to 1681 1 to 416   fully sequenced,   416/416
(100 %)
12 diff
(97.2 %id)
AL567370 brain, fetal brain .a 1375 to 1969 590 to 1       590/594
(99 %)
35 diff
(94.2 %id)
DB354723 whole embryo, mainly head .a 1468 to 1994 528 to 1       528/545
(96 %)
14 diff
(97.5 %id)
AW411125 muscle, rhabdomyosarcoma .a 1497 to 1994 528 to 31   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 498/498
(100 %)
2 diff
(99.6 %id)
R66048 placenta .a 1651 to 2001 358 to 2   fully sequenced,   357/358
(99 %)
12 diff
(96.7 %id)
CR605160 Placenta Cot 25-normalized .b 1 to 1733 1 to 1733 exact tiling clone,   1733/1733
(100 %)
0 diff
(100 %id)
BX379988 Placenta Cot 25-normalized .b 1 to 1006 1 to 1003 exact fully sequenced,   1003/1003
(100 %)
2 diff
(99.9 %id)
BX379987 Placenta Cot 25-normalized .b 976 to 1733 757 to 1   fully sequenced,   757/757
(100 %)
5 diff
(99.4 %id)
CN311033 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c-u 1 to 641 1 to 641   tiling clone,   641/641
(100 %)
1 diff
(99.9 %id)
TI_1948152967   .c-u 242 to 726 613 to 126       488/1071
(45 %)
0 diff
(100 %id)
AA425467   .c-u 451 to 963 1 to 512       512/512
(100 %)
1 diff
(99.9 %id)
W40431 lung .c-u 475 to 975 1 to 505       505/505
(100 %)
5 diff
(99.1 %id)
AW957374   .c-u 527 to 1133 11 to 617       607/648
(93 %)
6 diff
(99.1 %id)
T33450 brain .c-u 528 to 937 1 to 413       413/413
(100 %)
4 diff
(99.1 %id)
H12668 placenta .c-u 531 to 1022 1 to 504       504/504
(100 %)
25 diff
(95.1 %id)
BX117179 placenta .c-u 532 to 1321 1 to 790   tiling clone,   790/790
(100 %)
0 diff
(100 %id)
BM725464 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c-u 546 to 1018 1 to 473     Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 473/473
(100 %)
0 diff
(100 %id)
CB161398 Liver .c-u 607 to 1158 1 to 552       552/552
(100 %)
0 diff
(100 %id)
Z44587 brain, total brain .c-u 661 to 961 1 to 301       301/301
(100 %)
2 diff
(99.4 %id)
BX327272 Placenta Cot 25-normalized .c-u 664 to 1520 1 to 858       858/962
(89 %)
32 diff
(96.7 %id)
BX327273 Placenta Cot 25-normalized .c-u 668 to 1587 1 to 913       913/913
(100 %)
34 diff
(96.3 %id)
BX423434 brain, fetal brain .c-u 720 to 1728 1009 to 1       1009/1085
(92 %)
20 diff
(98.2 %id)
BX360260 Placenta Cot 25-normalized .c-u 731 to 1737 1008 to 1       1008/1033
(97 %)
30 diff
(97.1 %id)
AA195556 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c-u 735 to 1183 15 to 465       451/465
(96 %)
6 diff
(98.8 %id)
AA195752 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c-u 735 to 1120 1 to 387       387/396
(97 %)
3 diff
(99.3 %id)
AA195087 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c-u 735 to 1382 1 to 646       646/648
(99 %)
8 diff
(98.8 %id)
T29924 Pancreas .c-u 747 to 1062 1 to 320       320/322
(99 %)
7 diff
(97.9 %id)
AA024872 heart .c-u 755 to 1027 1 to 275     Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 275/281
(97 %)
3 diff
(99.0 %id)
AA133417 uterus .c-u 784 to 1065 1 to 284       284/284
(100 %)
6 diff
(97.9 %id)
BX460825 brain, fetal brain .c-u 794 to 1627 834 to 17       818/886
(92 %)
0 diff
(100 %id)
T35437 lung .c-u 794 to 1084 1 to 293       293/297
(98 %)
3 diff
(99.0 %id)
BX345528 Neuroblastoma Cot 25-normalized .c-u 839 to 1732 892 to 1       892/892
(100 %)
2 diff
(99.8 %id)
H90799 liver and spleen .c-u 887 to 1317 1 to 443       443/450
(98 %)
13 diff
(97.2 %id)
BF105071 Kidney .c-u 896 to 1479 1 to 583       583/866
(67 %)
5 diff
(99.5 %id)
TI_149293499   .c-u 943 to 1756 887 to 85   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 803/954
(84 %)
13 diff
(98.7 %id)
AA373336 lung .c-u 947 to 1146 1 to 200       200/202
(99 %)
1 diff
(99.6 %id)
BU682632 lung .c-u 979 to 1756 784 to 13   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 772/776
(99 %)
6 diff
(99.3 %id)
BM677885 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c-u 1041 to 1756 728 to 13   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 716/716
(100 %)
1 diff
(99.9 %id)
CB218554 mandible, pooled .c-u 1067 to 1351 1 to 284   fully sequenced, Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 284/284
(100 %)
3 diff
(99.0 %id)
AA024998 heart .c-u 1094 to 1526 463 to 31   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 433/433
(100 %)
2 diff
(99.6 %id)
R24215 placenta .c-u 1124 to 1407 1 to 308   fully sequenced,   308/308
(100 %)
12 diff
(96.2 %id)
CB217406 mandible, pooled .c-u 1139 to 1302 21 to 183     Submitted on the opposite strand 163/186
(87 %)
2 diff
(99.0 %id)
AI151442 uterus .c-u 1193 to 1753 560 to 1       560/560
(100 %)
6 diff
(99.0 %id)
AI670093 Prostate .c-u 1194 to 1756 563 to 1       563/563
(100 %)
1 diff
(99.9 %id)
AI669240 Prostate .c-u 1202 to 1756 555 to 1       555/555
(100 %)
0 diff
(100 %id)
FN067463 breast carcinoma .c-u 1223 to 1278 1 to 57       57/64
(89 %)
4 diff
(93.8 %id)
BX435189 brain, fetal brain .c-u 1227 to 1711 492 to 1       492/555
(88 %)
35 diff
(93.7 %id)
AA194946 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c-u 1236 to 1750 514 to 1       514/514
(100 %)
4 diff
(99.3 %id)
AI808052 pooled .c-u 1252 to 1748 503 to 8       496/503
(98 %)
0 diff
(100 %id)
H12618 placenta .c-u 1271 to 1734 466 to 1       466/471
(98 %)
14 diff
(97.1 %id)
BX413306 brain, fetal brain .c-u 1285 to 1728 445 to 1       445/509
(87 %)
24 diff
(95.3 %id)
AA700297 liver and spleen .c-u 1292 to 1750 458 to 1       458/458
(100 %)
3 diff
(99.4 %id)
BF732418 fibrotheoma, ovary .c-u 1302 to 1756 456 to 1       456/456
(100 %)
1 diff
(99.8 %id)
AA702853 liver and spleen .c-u 1309 to 1750 440 to 1       440/440
(100 %)
3 diff
(99.4 %id)
AI688673 colon .c-u 1309 to 1754 446 to 1       446/446
(100 %)
0 diff
(100 %id)
N93931 lung .c-u 1310 to 1757 460 to 4       457/460
(99 %)
0 diff
(100 %id)
AI671406 Kidney .c-u 1310 to 1750 441 to 1       441/441
(100 %)
1 diff
(99.8 %id)
BE502303 pooled germ cell tumors .c-u 1313 to 1756 443 to 1       443/450
(98 %)
1 diff
(99.8 %id)
AI078393   .c-u 1315 to 1757 446 to 4   tiling clone,   443/446
(99 %)
0 diff
(100 %id)
CB218553 mandible, pooled .c-u 1321 to 1756 470 to 35   fully sequenced, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 436/436
(100 %)
1 diff
(99.8 %id)
BF512887   .c-u 1331 to 1756 437 to 12   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 426/426
(100 %)
2 diff
(99.6 %id)
AI189137 uterus .c-u 1332 to 1750 419 to 1       419/419
(100 %)
0 diff
(100 %id)
AA425375   .c-u 1344 to 1754 411 to 1       411/411
(100 %)
0 diff
(100 %id)
AI656096 pooled germ cell tumors .c-u 1347 to 1756 419 to 11   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 409/409
(100 %)
1 diff
(99.8 %id)
AW195085 Kidney .c-u 1350 to 1757 409 to 2       408/409
(99 %)
0 diff
(100 %id)
AI287581 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c-u 1352 to 1756 405 to 1       405/405
(100 %)
0 diff
(100 %id)
H02011 placenta .c-u 1365 to 1743 395 to 8       388/409
(94 %)
0 diff
(100 %id)
AA195715 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c-u 1371 to 1750 379 to 1       379/379
(100 %)
2 diff
(99.5 %id)
R24216 placenta .c-u 1377 to 1750 385 to 1   fully sequenced,   385/385
(100 %)
19 diff
(95.1 %id)
AI800331 Kidney .c-u 1380 to 1756 391 to 15   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 377/377
(100 %)
2 diff
(99.5 %id)
AI654892 pooled germ cell tumors .c-u 1399 to 1757 361 to 3       359/361
(99 %)
0 diff
(100 %id)
T33449 brain .c-u 1402 to 1750 349 to 1       349/349
(100 %)
1 diff
(99.8 %id)
BF057001 pooled germ cell tumors .c-u 1415 to 1755 344 to 4       341/344
(99 %)
0 diff
(100 %id)
AA115390 uterus .c-u 1447 to 1752 307 to 1       307/307
(100 %)
3 diff
(99.1 %id)
AA903701 leiomyosarcoma, soft tissue .c-u 1479 to 1723 244 to 1       244/246
(99 %)
3 diff
(98.8 %id)
N98972 lung .c-u 1490 to 1735 15 to 262   fully sequenced,   248/262
(94 %)
6 diff
(97.8 %id)
AI300252 placenta .c-u 1509 to 1754 246 to 1       246/253
(97 %)
0 diff
(100 %id)
H90748 liver and spleen .c-u 1514 to 1715 203 to 2       202/203
(99 %)
0 diff
(100 %id)
Z40465 brain, total brain .c-u 1525 to 1750 226 to 1       226/226
(100 %)
0 diff
(100 %id)
W90007 liver and spleen .c-u 1527 to 1757 233 to 3       231/233
(99 %)
0 diff
(100 %id)
BF059554 pooled germ cell tumors .c-u 1549 to 1756 208 to 1       208/208
(100 %)
0 diff
(100 %id)
N69833 lung .c-u 1568 to 1750 183 to 1   fully sequenced,   183/183
(100 %)
0 diff
(100 %id)
AI473272 Kidney .c-u 1645 to 1750 106 to 1       106/106
(100 %)
0 diff
(100 %id)
CN311034 embryonic stem cells, cell lines H1, H7, andH9 .d 1 to 661 1 to 662 E2R tiling clone,   662/662
(100 %)
1 diff
(99.9 %id)
AK021492 whole embryo, mainly head .e-u 1 to 1329 2 to 1330 exact tiling clone, available from FLJ,   1330/1330
(100 %)
0 diff
(100 %id)
AU117292 whole embryo, mainly head .e-u 1 to 734 2 to 737 exact capped   736/736
(100 %)
6 diff
(99.2 %id)
AU144172 whole embryo, mainly head .e-u 749 to 1329 575 to 1       575/578
(99 %)
12 diff
(98.0 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c-u, .d, .e-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI