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Gene RAPGEF4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
296 supporting clones for gene RAPGEF4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB471672 hippocampus .a 1 to 506 1 to 506   tiling clone,   506/506
(100 %)
6 diff
(98.9 %id)
NM_007023.3   .a 6 to 4351 1 to 4346   RefSeq, AAA   4346/4346
(100 %)
1 diff
(100.0 %id)
TI_44168821   .a 42 to 510 78 to 546       469/546
(85 %)
12 diff
(97.9 %id)
BI546558 brain, hippocampus .a 46 to 510 1 to 465       465/465
(100 %)
8 diff
(98.3 %id)
DN989862 brain, whole brain .a 56 to 710 1 to 654       654/670
(97 %)
6 diff
(99.2 %id)
BG699133 brain, hippocampus .a 58 to 710 1 to 653   tiling clone,   653/746
(87 %)
6 diff
(99.2 %id)
DA323354 hippocampus .a 66 to 538 2 to 474   capped   473/473
(100 %)
0 diff
(100 %id)
U78516   .a 88 to 4352 1 to 4268   tiling clone, AAA   4268/4268
(100 %)
11 diff
(99.8 %id)
DA324042 hippocampus .a 119 to 682 2 to 565   capped   564/564
(100 %)
3 diff
(99.5 %id)
DA213029 brain .a 129 to 614 2 to 488   capped   487/487
(100 %)
1 diff
(99.8 %id)
AB027471   .a 136 to 3277 1 to 3142   tiling clone,   3142/3142
(100 %)
1 diff
(100.0 %id)
DA324331 hippocampus .a 136 to 672 2 to 538   capped   537/539
(99 %)
1 diff
(99.9 %id)
AK313084 hippocampus .a 137 to 3228 1 to 3092       3092/3092
(100 %)
1 diff
(100.0 %id)
DA328459 hippocampus .a 138 to 700 2 to 564   capped   563/564
(99 %)
0 diff
(100 %id)
DC321539 brain .a 139 to 690 1 to 554       554/554
(100 %)
4 diff
(99.3 %id)
BP199790 brain .a 140 to 636 1 to 497       497/581
(85 %)
2 diff
(99.7 %id)
DA093362 cerebellum .a 140 to 599 2 to 461   capped   460/460
(100 %)
0 diff
(100 %id)
DA113426 cerebellum .a 140 to 710 2 to 572   capped   571/596
(95 %)
1 diff
(99.9 %id)
DA212269 brain .a 140 to 683 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
DA215929 brain .a 140 to 611 2 to 473   capped   472/472
(100 %)
0 diff
(100 %id)
DA223136 brain .a 140 to 613 2 to 480   capped   479/479
(100 %)
5 diff
(99.0 %id)
DA233105 brain .a 140 to 710 2 to 573   capped   572/584
(97 %)
2 diff
(99.7 %id)
DA243964 brain .a 140 to 710 2 to 572   capped   571/593
(96 %)
1 diff
(99.9 %id)
DA321263 hippocampus .a 140 to 706 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA321922 hippocampus .a 140 to 676 2 to 540   capped   539/544
(99 %)
7 diff
(98.8 %id)
DA323432 hippocampus .a 140 to 710 2 to 572   capped   571/632
(90 %)
1 diff
(99.9 %id)
DA409808 thalamus .a 140 to 710 2 to 572   capped   571/664
(85 %)
1 diff
(99.9 %id)
DA416942 thalamus .a 140 to 708 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB471657 hippocampus .a 140 to 636 1 to 497       497/510
(97 %)
6 diff
(98.9 %id)
DA314525 hippocampus .a 142 to 383 2 to 252   capped   251/251
(100 %)
8 diff
(96.9 %id)
DA314947 hippocampus .a 144 to 687 2 to 546   capped   545/545
(100 %)
2 diff
(99.7 %id)
DA187593 amygdala .a 145 to 680 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
DC322697 brain .a 145 to 710 1 to 568       568/569
(99 %)
5 diff
(99.2 %id)
DA313286 hippocampus .a 145 to 636 2 to 492   capped   491/543
(90 %)
2 diff
(99.7 %id)
DA191364 amygdala .a 162 to 710 2 to 550   capped   549/588
(93 %)
2 diff
(99.7 %id)
DA241133 brain .a 162 to 710 2 to 550   capped   549/584
(94 %)
1 diff
(99.9 %id)
BP199294 brain .a 163 to 710 1 to 547       547/587
(93 %)
2 diff
(99.7 %id)
DA183992 amygdala .a 164 to 710 2 to 548   capped   547/553
(98 %)
1 diff
(99.9 %id)
DA219989 brain .a 164 to 710 2 to 549   capped   548/553
(99 %)
2 diff
(99.7 %id)
DA320571 hippocampus .a 164 to 692 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
DA324066 hippocampus .a 164 to 710 2 to 548   capped   547/563
(97 %)
2 diff
(99.7 %id)
DA325829 hippocampus .a 164 to 710 2 to 548   capped   547/552
(99 %)
1 diff
(99.9 %id)
DA334068 hippocampus .a 164 to 710 2 to 548   capped   547/572
(95 %)
1 diff
(99.9 %id)
DA413228 thalamus .a 164 to 710 2 to 548   capped   547/549
(99 %)
1 diff
(99.9 %id)
BC024004 testis .a 167 to 4348 1 to 4182   available from MGC, AAA   4182/4182
(100 %)
5 diff
(99.9 %id)
DB475009 hippocampus .a 167 to 664 1 to 497       497/497
(100 %)
1 diff
(99.8 %id)
DA195452 amygdala .a 168 to 710 2 to 544   capped   543/558
(97 %)
1 diff
(99.9 %id)
DA246322 brain .a 168 to 710 2 to 544   capped   543/595
(91 %)
1 diff
(99.9 %id)
BG699604 brain, hippocampus .a 168 to 636 1 to 469       469/752
(62 %)
9 diff
(98.9 %id)
TI_44165935   .a 170 to 636 158 to 621       464/774
(59 %)
11 diff
(98.6 %id)
BI545999 brain, hippocampus .a 173 to 636 1 to 461       461/614
(75 %)
8 diff
(98.7 %id)
DA318035 hippocampus .a 174 to 710 2 to 538   capped   537/550
(97 %)
1 diff
(99.9 %id)
DA318043 hippocampus .a 174 to 710 2 to 538   capped   537/543
(98 %)
1 diff
(99.9 %id)
DA325196 hippocampus .a 174 to 710 2 to 538   capped   537/541
(99 %)
1 diff
(99.9 %id)
AL119269 amygdala .a 176 to 849 1 to 675       675/675
(100 %)
2 diff
(99.8 %id)
DB478363 hippocampus .a 178 to 668 1 to 491       491/491
(100 %)
2 diff
(99.6 %id)
DB479718 hippocampus .a 178 to 669 1 to 492       492/492
(100 %)
0 diff
(100 %id)
DA187053 amygdala .a 179 to 710 2 to 533   capped   532/552
(96 %)
1 diff
(99.9 %id)
DA330620 hippocampus .a 179 to 710 2 to 533   capped   532/565
(94 %)
1 diff
(99.9 %id)
DA331324 hippocampus .a 179 to 710 2 to 533   capped   532/580
(91 %)
1 diff
(99.9 %id)
DB468804 hippocampus .a 183 to 617 1 to 434       434/436
(99 %)
9 diff
(98.0 %id)
DA315076 hippocampus .a 187 to 710 2 to 525   capped   524/582
(90 %)
1 diff
(99.9 %id)
DC342419 thalamus .a 215 to 710 1 to 497       497/556
(89 %)
2 diff
(99.7 %id)
DA228686 brain .a 218 to 692 2 to 476   capped   475/475
(100 %)
0 diff
(100 %id)
DB463827 hippocampus .a 321 to 710 1 to 391       391/410
(95 %)
3 diff
(99.3 %id)
DB466436 hippocampus .a 321 to 710 1 to 390       390/422
(92 %)
2 diff
(99.6 %id)
DA226112 brain .a 344 to 636 2 to 295   capped   294/564
(52 %)
2 diff
(99.7 %id)
DA338985 hippocampus .a 375 to 964 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA228271 brain .a 467 to 1031 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA243467 brain .a 635 to 1106 118 to 589   capped   472/588
(80 %)
6 diff
(99.0 %id)
DB478840 hippocampus .a 671 to 1192 1 to 520       520/520
(100 %)
2 diff
(99.7 %id)
DA240824 brain .a 675 to 1264 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA324291 hippocampus .a 760 to 1282 2 to 525   capped   524/524
(100 %)
1 diff
(99.9 %id)
DA318104 hippocampus .a 761 to 1314 2 to 556   capped   555/555
(100 %)
2 diff
(99.7 %id)
DA098664 cerebellum .a 820 to 1375 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA234785 brain .a 820 to 1412 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DA315669 hippocampus .a 820 to 1370 2 to 553   capped   552/552
(100 %)
2 diff
(99.7 %id)
DA332017 hippocampus .a 825 to 1369 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
DA211435 brain .a 851 to 1401 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DB480377 hippocampus .a 853 to 1241 1 to 389       389/389
(100 %)
8 diff
(98.0 %id)
DA194286 amygdala .a 890 to 1461 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
CU457218 epidermis .a 896 to 1197 314 to 13     Submitted on the opposite strand 303/325
(93 %)
0 diff
(100 %id)
BF762294 colon_est .a 990 to 1300 1 to 311       311/311
(100 %)
2 diff
(99.4 %id)
AL119765 amygdala .a 1098 to 1506 1 to 409       409/409
(100 %)
4 diff
(99.1 %id)
BG700059 brain, hippocampus .a 1357 to 1979 1 to 623       623/623
(100 %)
5 diff
(99.2 %id)
BI544604 brain, hippocampus .a 1357 to 2112 1 to 755       755/756
(99 %)
12 diff
(98.5 %id)
DB463406 hippocampus .a 1362 to 1801 1 to 440       440/440
(100 %)
6 diff
(98.7 %id)
DA175457 amygdala .a 1556 to 2127 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA135384 alzheimer cortex .a 1737 to 2280 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA344124 substantia nigra .a 1757 to 2313 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA309411 hippocampus .a 1793 to 2259 2 to 468   capped   467/467
(100 %)
0 diff
(100 %id)
DA293444 hippocampus .a 1796 to 2378 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
BP276629 Kidney .a 1806 to 2374 1 to 577       577/577
(100 %)
9 diff
(98.5 %id)
DB171603 kidney, tumor tissue .a 1830 to 2395 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
BP292667 lung .a 1870 to 2451 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA167393 amygdala .a 1909 to 2476 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA169024 amygdala .a 1911 to 2377 2 to 468   capped   467/467
(100 %)
0 diff
(100 %id)
BP361864 thalamus .a 1912 to 2493 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
CU447180 epidermis .a 1913 to 2641 730 to 1     Submitted on the opposite strand 730/730
(100 %)
5 diff
(99.4 %id)
AI003002 schizophrenic brain S-11 frontal lobe .a 1914 to 2227 315 to 2       314/317
(99 %)
0 diff
(100 %id)
DA146166 amygdala .a 1954 to 2448 2 to 496   capped   495/495
(100 %)
1 diff
(99.8 %id)
DA134797 alzheimer cortex .a 2020 to 2569 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB165914 thyroid gland .a 2020 to 2785 2 to 767   capped   766/772
(99 %)
4 diff
(99.5 %id)
DA265075 caudate nucleus .a 2076 to 2644 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
DA131514 alzheimer cortex .a 2077 to 2705 2 to 630   capped   629/629
(100 %)
1 diff
(99.9 %id)
AI205130 schizophrenic brain S-11 frontal lobe .a 2164 to 2431 1 to 268     Submitted on the opposite strand 268/268
(100 %)
0 diff
(100 %id)
BI548847 brain, hippocampus .a 2204 to 3006 1 to 808       809/810
(99 %)
17 diff
(98.0 %id)
TI_1948149872   .a 2207 to 3231 1139 to 126       1014/1414
(71 %)
41 diff
(97.2 %id)
TI_1948150169   .a 2207 to 3231 1147 to 125       1023/1333
(76 %)
50 diff
(96.3 %id)
DA361934 subthalamic nucleus .a 2209 to 2754 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
BG706198 brain, hypothalamus .a 2218 to 3003 1 to 786       786/792
(99 %)
4 diff
(99.5 %id)
BI668851 brain, hypothalamus .a 2218 to 2983 1 to 767       767/793
(96 %)
6 diff
(99.3 %id)
TI_44345557   .a 2219 to 2983 60 to 822       763/848
(89 %)
10 diff
(98.9 %id)
DB504346 hypothalamus .a 2224 to 2696 1 to 473       473/473
(100 %)
2 diff
(99.6 %id)
TI_1948149871   .a 2239 to 3231 1115 to 123       920/1350
(68 %)
44 diff
(96.8 %id)
DA132582 alzheimer cortex .a 2266 to 2816 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
TI_1948150170   .a 2280 to 3231 1089 to 129       961/1455
(66 %)
28 diff
(98.1 %id)
DA270334 caudate nucleus .a 2289 to 2846 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
BX645270   .a 2309 to 2975 1 to 667       667/667
(100 %)
0 diff
(100 %id)
TI_1948149580   .a 2346 to 3231 1007 to 124       884/1317
(67 %)
18 diff
(98.7 %id)
TI_1948149581   .a 2346 to 3231 1011 to 125       887/1398
(63 %)
27 diff
(98.1 %id)
TI_1948150479   .a 2349 to 3231 1008 to 128       881/1372
(64 %)
10 diff
(99.3 %id)
DA175043 amygdala .a 2378 to 2935 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
TI_1948150478   .a 2438 to 3231 912 to 123       790/1320
(59 %)
11 diff
(99.2 %id)
DB466032 hippocampus .a 2523 to 2929 1 to 407       407/409
(99 %)
2 diff
(99.6 %id)
BE889718 leiomyosarcoma, uterus .a 2546 to 3324 1 to 792       792/877
(90 %)
37 diff
(95.8 %id)
BP257448 heart .a 2547 to 3116 1 to 570       570/570
(100 %)
0 diff
(100 %id)
DB496830 hypothalamus .a 2573 to 2902 1 to 330       330/330
(100 %)
3 diff
(99.1 %id)
BG429570 Kidney .a 2640 to 3379 1 to 748       748/758
(98 %)
20 diff
(97.4 %id)
BP218753 caudate nucleus .a 2652 to 3234 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BG547379 lung .a 2790 to 3564 1 to 774       774/776
(99 %)
5 diff
(99.4 %id)
BM548542 brain, hippocampus .a 2799 to 3806 1 to 1028       1028/1084
(94 %)
53 diff
(95.2 %id)
TI_1948155082   .a 2821 to 3231 136 to 546       411/1329
(30 %)
15 diff
(98.9 %id)
TI_1948155223   .a 2821 to 3231 133 to 543       411/694
(59 %)
9 diff
(98.8 %id)
TI_1948155383   .a 2821 to 3231 131 to 541       411/668
(61 %)
9 diff
(98.7 %id)
TI_1948155544   .a 2821 to 3231 134 to 544       411/622
(66 %)
9 diff
(98.6 %id)
AW888942 nervous_tumor .a 2858 to 3302 445 to 1       445/445
(100 %)
6 diff
(98.7 %id)
R59283 whole brain .a 2866 to 3309 1 to 446       446/446
(100 %)
5 diff
(98.9 %id)
CV569115 cornea, eye .a 2921 to 3437 1 to 517       517/517
(100 %)
0 diff
(100 %id)
BQ340435 nervous_normal .a 2931 to 3146 1 to 216       216/216
(100 %)
7 diff
(96.8 %id)
DB530545 hippocampus .a 2969 to 3391 1 to 423     Submitted on the opposite strand 423/423
(100 %)
0 diff
(100 %id)
DB537477 hippocampus .a 2975 to 3391 1 to 419     Submitted on the opposite strand 419/419
(100 %)
10 diff
(97.7 %id)
AL120018 amygdala .a 2995 to 3337 1 to 343       343/343
(100 %)
1 diff
(99.8 %id)
BF962288 nervous_normal .a 3002 to 3165 56 to 219       164/219
(74 %)
6 diff
(97.3 %id)
DB381771 thyroid gland .a 3800 to 4348 549 to 1       549/549
(100 %)
7 diff
(98.8 %id)
R59223 whole brain .a 3894 to 4351 473 to 16   tiling clone, AAA   458/464
(98 %)
32 diff
(93.2 %id)
AL700853 human skeletal muscle .b 1 to 424 1 to 430   tiling clone,   430/430
(100 %)
7 diff
(98.4 %id)
BC040183 Brain, hypothalamus .b 14 to 4118 1 to 4106 P180R H367R L503I P758T tiling clone, available from MGC, AAA   4106/4106
(100 %)
8 diff
(99.9 %id)
NM_001100397.1   .b 14 to 4118 1 to 4105 exact RefSeq, AAA   4105/4105
(100 %)
1 diff
(100.0 %id)
AK311500 placenta .b 15 to 984 1 to 971       971/971
(100 %)
2 diff
(99.8 %id)
DB490988 hypothalamus .b 15 to 272 1 to 258       258/276
(93 %)
16 diff
(94.3 %id)
DB497695 hypothalamus .b 15 to 496 1 to 484       484/495
(97 %)
1 diff
(99.8 %id)
DB504899 hypothalamus .b 15 to 483 1 to 470       470/470
(100 %)
1 diff
(99.8 %id)
DA859650 placenta .b 16 to 556 2 to 543   capped   542/542
(100 %)
2 diff
(99.7 %id)
AK311697 trachea .b 38 to 1006 1 to 970       970/970
(100 %)
3 diff
(99.7 %id)
DB225330 trachea .b 39 to 605 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
AW295275   .b 77 to 385 319 to 10   tiling clone, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 310/329
(94 %)
0 diff
(100 %id)
BF939597 Kidney .b 110 to 377 269 to 1       269/269
(100 %)
1 diff
(99.7 %id)
AK304278 trachea .b 254 to 3424 1 to 3171 exact tiling clone,   3171/3171
(100 %)
3 diff
(100.0 %id)
DA882180   .b 254 to 818 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DC417638 trachea .b 254 to 831 1 to 578       578/578
(100 %)
1 diff
(99.9 %id)
DB276495 uterus .b 254 to 790 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DB285899 uterus .b 254 to 816 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB275937 uterus .b 274 to 761 2 to 489   capped   488/488
(100 %)
0 diff
(100 %id)
DB140709 thymus .b 279 to 814 2 to 537   capped   536/536
(100 %)
2 diff
(99.7 %id)
DB146478 thymus .b 281 to 855 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DB282143 uterus .b 317 to 864 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
TI_1948149578   .b 379 to 1453 115 to 1179       1065/1421
(74 %)
60 diff
(95.8 %id)
TI_1948149579   .b 379 to 1262 113 to 990       878/1365
(64 %)
16 diff
(98.9 %id)
TI_1948149869   .b 379 to 1334 119 to 1078       960/1575
(60 %)
25 diff
(98.5 %id)
TI_1948149870   .b 379 to 1187 113 to 920       808/1348
(59 %)
13 diff
(99.1 %id)
TI_1948150167   .b 379 to 1273 126 to 1027       902/1485
(60 %)
38 diff
(97.5 %id)
TI_1948150168   .b 379 to 1334 114 to 1070       957/1474
(64 %)
27 diff
(98.2 %id)
TI_1948150476   .b 379 to 1297 125 to 1040       916/1445
(63 %)
21 diff
(98.6 %id)
TI_1948150477   .b 379 to 1281 109 to 1002       892/1464
(60 %)
37 diff
(97.5 %id)
CV024801 mixed .b 392 to 1029 1 to 638       638/638
(100 %)
4 diff
(99.4 %id)
AK294445 amygdala .c 1 to 2961 1 to 2961 exact tiling clone,   2961/2961
(100 %)
1 diff
(100.0 %id)
DC317399 amygdala .c 1 to 536 1 to 536       536/536
(100 %)
0 diff
(100 %id)
DC335305 hippocampus .d 1 to 593 1 to 592   tiling clone,   592/592
(100 %)
1 diff
(99.9 %id)
DC334975 hippocampus .d 14 to 571 1 to 559       559/559
(100 %)
2 diff
(99.7 %id)
DC422953 uterus .d 14 to 559 1 to 545       545/545
(100 %)
1 diff
(99.9 %id)
AK316014 brain .d 37 to 3266 1 to 3229 K270R     3229/3229
(100 %)
6 diff
(99.9 %id)
DC323291 brain .d 37 to 609 1 to 572       572/572
(100 %)
2 diff
(99.7 %id)
DC335039 hippocampus .d 48 to 626 1 to 578       578/578
(100 %)
2 diff
(99.7 %id)
DC318612 amygdala .d 67 to 642 1 to 575       575/575
(100 %)
1 diff
(99.9 %id)
DC323778 brain .d 67 to 626 1 to 559       559/559
(100 %)
2 diff
(99.7 %id)
DC318012 amygdala .d 69 to 671 1 to 602       602/603
(99 %)
2 diff
(99.7 %id)
DC317357 amygdala .d 70 to 612 1 to 542       542/542
(100 %)
1 diff
(99.9 %id)
AK316072 hippocampus .d 105 to 3172 1 to 3067 exact tiling clone,   3067/3067
(100 %)
1 diff
(100.0 %id)
DC335765 hippocampus .d 105 to 695 1 to 590       590/590
(100 %)
1 diff
(99.9 %id)
DC317016 amygdala .d 229 to 770 1 to 543       543/543
(100 %)
1 diff
(99.9 %id)
AB075513   .d 1417 to 4084 1 to 2668   tiling clone,   2668/2672
(99 %)
7 diff
(99.8 %id)
DB487837 hypothalamus .d 2727 to 3109 10 to 394       385/394
(97 %)
6 diff
(98.5 %id)
CK005169 brain/CNS, Human Brain - Frontal Cortex .d 2727 to 3349 13 to 634       622/649
(95 %)
3 diff
(99.6 %id)
BF947547 nervous_normal .d 2747 to 2855 1 to 109       109/109
(100 %)
2 diff
(98.2 %id)
FN065877 breast carcinoma .d 2760 to 2815 1 to 56       56/57
(98 %)
1 diff
(98.3 %id)
BF947601 nervous_normal .d 2762 to 2855 13 to 106       94/106
(88 %)
6 diff
(94.4 %id)
H22718 whole brain .d 2871 to 3344 1 to 484       484/486
(99 %)
13 diff
(97.4 %id)
AW904694 nervous_normal .d 3007 to 3275 274 to 8       267/275
(97 %)
0 diff
(100 %id)
EL953509 eyeball .d 3032 to 3664 1 to 632       632/632
(100 %)
2 diff
(99.7 %id)
AW904680 nervous_normal .d 3046 to 3287 3 to 239       237/240
(98 %)
6 diff
(97.5 %id)
AL119792 amygdala .d 3230 to 3705 1 to 476       476/476
(100 %)
0 diff
(100 %id)
BQ187703 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 3259 to 3977 1 to 718   tiling clone, fully sequenced, AAA   718/718
(100 %)
7 diff
(99.1 %id)
BM955820 tonsil .d 3378 to 3848 1 to 471       471/471
(100 %)
2 diff
(99.6 %id)
DB540400 hippocampus .d 3478 to 3977 1 to 500     Submitted on the opposite strand 500/500
(100 %)
3 diff
(99.4 %id)
DB568796 hypothalamus .d 3481 to 3977 1 to 497     Submitted on the opposite strand 497/497
(100 %)
3 diff
(99.4 %id)
DB576159 hypothalamus .d 3488 to 3977 1 to 490     Submitted on the opposite strand 490/490
(100 %)
2 diff
(99.6 %id)
DB575588 hypothalamus .d 3489 to 3977 1 to 489     Submitted on the opposite strand 489/489
(100 %)
1 diff
(99.8 %id)
BX093839 whole brain .d 3493 to 3978 500 to 15   AAA   486/486
(100 %)
4 diff
(99.2 %id)
AI652486 pooled germ cell tumors .d 3499 to 3974 501 to 26   AAA   476/476
(100 %)
11 diff
(97.7 %id)
DB540414 hippocampus .d 3500 to 3977 1 to 478     Submitted on the opposite strand 478/478
(100 %)
2 diff
(99.6 %id)
AI679562 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .d 3500 to 3977 517 to 40   AAA   478/478
(100 %)
1 diff
(99.8 %id)
DB547013 hippocampus .d 3512 to 3977 1 to 466     Submitted on the opposite strand 466/466
(100 %)
1 diff
(99.8 %id)
DB567851 hypothalamus .d 3515 to 3977 1 to 463     Submitted on the opposite strand 463/463
(100 %)
1 diff
(99.8 %id)
DB549129 hippocampus .d 3522 to 3977 1 to 456     Submitted on the opposite strand 456/457
(99 %)
2 diff
(99.6 %id)
AI613191 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .d 3527 to 3980 458 to 6       453/458
(98 %)
0 diff
(100 %id)
AI361565 brain, glioblastoma (pooled) .d 3528 to 3974 447 to 1       447/447
(100 %)
1 diff
(99.8 %id)
DB543834 hippocampus .d 3529 to 3977 1 to 449     Submitted on the opposite strand 449/449
(100 %)
9 diff
(98.0 %id)
DB547504 hippocampus .d 3535 to 3977 1 to 443     Submitted on the opposite strand 443/443
(100 %)
1 diff
(99.8 %id)
DB557258 hypothalamus .d 3537 to 3974 1 to 429     Submitted on the opposite strand 429/429
(100 %)
24 diff
(94.5 %id)
DB538545 hippocampus .d 3538 to 3974 1 to 440     Submitted on the opposite strand 440/440
(100 %)
31 diff
(93.0 %id)
BI481264 Native Retinal Pigment Epithelium sheets, retina .d 3539 to 3968 12 to 443       432/443
(97 %)
5 diff
(98.9 %id)
DB533004 hippocampus .d 3539 to 3977 1 to 449     Submitted on the opposite strand 449/449
(100 %)
22 diff
(95.2 %id)
DB529275 hippocampus .d 3541 to 3974 1 to 434     Submitted on the opposite strand 434/434
(100 %)
5 diff
(98.9 %id)
BQ184791 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 3546 to 3977 447 to 16   fully sequenced, AAA   432/432
(100 %)
1 diff
(99.8 %id)
BG059587 brain, glioblastoma without EGFR amplification .d 3547 to 3974 444 to 17   AAA   428/428
(100 %)
3 diff
(99.3 %id)
DB529883 hippocampus .d 3556 to 3974 1 to 422     Submitted on the opposite strand 422/422
(100 %)
8 diff
(98.2 %id)
DB561328 hypothalamus .d 3556 to 3977 1 to 426     Submitted on the opposite strand 426/426
(100 %)
11 diff
(97.5 %id)
DB531683 hippocampus .d 3557 to 3977 1 to 419     Submitted on the opposite strand 419/419
(100 %)
11 diff
(97.4 %id)
DB548438 hippocampus .d 3559 to 3977 1 to 419     Submitted on the opposite strand 419/419
(100 %)
1 diff
(99.8 %id)
AI610732 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .d 3595 to 3977 383 to 1       383/383
(100 %)
1 diff
(99.8 %id)
AI652527 pooled germ cell tumors .d 3595 to 3974 402 to 23   AAA   380/380
(100 %)
5 diff
(98.7 %id)
DB536252 hippocampus .d 3631 to 4081 1 to 454   tiling clone, Submitted on the opposite strand 454/456
(99 %)
8 diff
(98.3 %id)
AI368356 follicular lymphoma, lymph node .d 3653 to 3977 330 to 1       330/330
(100 %)
6 diff
(98.2 %id)
AW016479   .d 3661 to 3977 331 to 15   AAA   317/317
(100 %)
1 diff
(99.7 %id)
AI680002 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .d 3664 to 3977 327 to 14   AAA   314/314
(100 %)
2 diff
(99.4 %id)
T23562   .d 3675 to 3980 308 to 1       308/308
(100 %)
6 diff
(98.1 %id)
DB533218 hippocampus .d 3722 to 3974 1 to 253     Submitted on the opposite strand 253/253
(100 %)
10 diff
(96.1 %id)
H24000 whole brain .d 3726 to 3977 271 to 19   AAA   253/255
(99 %)
2 diff
(99.3 %id)
AA502018 Prostate .d 3742 to 3974 1 to 233   AAA   233/233
(100 %)
1 diff
(99.6 %id)
AK294914 brain .e 1 to 2644 1 to 2644 exact tiling clone,   2644/2644
(100 %)
2 diff
(100.0 %id)
DC322731 brain .e 1 to 554 1 to 555       555/555
(100 %)
1 diff
(99.9 %id)
DC333698 hippocampus .e 12 to 573 1 to 562       562/563
(99 %)
1 diff
(99.9 %id)
DC322162 brain .e 18 to 594 1 to 578       578/578
(100 %)
1 diff
(99.9 %id)
AK296340 thalamus .f 1 to 2930 1 to 2929 exact tiling clone,   2929/2929
(100 %)
1 diff
(100.0 %id)
DC342445 thalamus .f 1 to 566 1 to 565       565/565
(100 %)
1 diff
(99.9 %id)
DC333426 hippocampus .f 33 to 579 1 to 546       546/547
(99 %)
1 diff
(99.9 %id)
DC307347 cerebellum .f 43 to 609 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
DC323587 brain .f 62 to 650 1 to 589       589/589
(100 %)
2 diff
(99.7 %id)
DC325122 brain .f 70 to 643 1 to 573       573/573
(100 %)
2 diff
(99.7 %id)
DC333484 hippocampus .f 100 to 654 1 to 555       555/555
(100 %)
2 diff
(99.7 %id)
DC335476 hippocampus .f 100 to 691 1 to 591       591/591
(100 %)
1 diff
(99.9 %id)
DC335263 hippocampus .f 208 to 790 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DC332257 hippocampus .f 261 to 791 1 to 532       532/532
(100 %)
1 diff
(99.9 %id)
DA240482 brain .f 306 to 895 2 to 592   capped   591/591
(100 %)
1 diff
(99.9 %id)
AK294433 amygdala .g 1 to 2722 1 to 2722 exact tiling clone,   2722/2722
(100 %)
0 diff
(100 %id)
DC317217 amygdala .g 1 to 559 1 to 560       560/560
(100 %)
1 diff
(99.9 %id)
AK311575 testis .h 1 to 974 1 to 974   tiling clone,   974/974
(100 %)
0 diff
(100 %id)
DC394782 testis .h 1 to 522 1 to 522       522/522
(100 %)
0 diff
(100 %id)
TI_44000774   .h 775 to 1503 91 to 818   tiling clone,   751/841
(89 %)
18 diff
(97.9 %id)
AK302732 testis .i 1 to 1372 1 to 1370 Q387R G388Y T389R E390T Q391G ... tiling clone,   1370/1370
(100 %)
1 diff
(100.0 %id)
DC402216 testis .i 1 to 574 1 to 575       575/575
(100 %)
1 diff
(99.9 %id)
BP342773 stomach mucosa .i 7 to 499 1 to 493       493/582
(84 %)
1 diff
(99.9 %id)
DC404012 testis .i 7 to 568 1 to 562       562/562
(100 %)
1 diff
(99.9 %id)
DC404099 testis .i 7 to 562 1 to 556       556/556
(100 %)
0 diff
(100 %id)
DC399382 testis .i 9 to 573 1 to 565       565/565
(100 %)
0 diff
(100 %id)
DC403245 testis .i 9 to 569 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DC317280 amygdala .i 35 to 608 1 to 574       574/574
(100 %)
1 diff
(99.9 %id)
AK311165 amygdala .j 1 to 1200 1 to 1200 exact tiling clone,   1200/1200
(100 %)
1 diff
(100.0 %id)
DC317048 amygdala .j 1 to 562 1 to 562       562/562
(100 %)
0 diff
(100 %id)
TI_154115110   .k 1 to 878 968 to 97 V4S I5S S6G A7S V8A ... tiling clone, AAA   870/984
(88 %)
14 diff
(98.6 %id)
CA448982 Chondrosarcoma, Left Pelvis .k 235 to 878 663 to 19   AAA   645/645
(100 %)
1 diff
(99.9 %id)
DB515393 testis .k 464 to 894 1 to 431   tiling clone, Submitted on the opposite strand 431/431
(100 %)
0 diff
(100 %id)
DC323547 brain .l 1 to 510 1 to 510   tiling clone,   510/510
(100 %)
4 diff
(99.3 %id)
DC333831 hippocampus .l 362 to 896 1 to 536   tiling clone,   536/536
(100 %)
1 diff
(99.9 %id)
DC308155 cerebellum .m 1 to 586 1 to 586 exact tiling clone,   586/594
(98 %)
1 diff
(99.9 %id)
DC321710 brain .m 1 to 552 1 to 552       552/552
(100 %)
0 diff
(100 %id)
DC332457 hippocampus .m 1 to 548 1 to 548       548/548
(100 %)
1 diff
(99.9 %id)
DC324353 brain .m 44 to 586 1 to 543       543/580
(93 %)
3 diff
(99.5 %id)
DC322743 brain .m 46 to 586 1 to 541       541/555
(97 %)
1 diff
(99.9 %id)
DC325319 brain .m 106 to 586 1 to 481       481/591
(81 %)
2 diff
(99.7 %id)
DC323043 brain .n 1 to 580 1 to 580 exact tiling clone,   580/580
(100 %)
0 diff
(100 %id)
DC333680 hippocampus .n 19 to 576 1 to 558       558/558
(100 %)
2 diff
(99.7 %id)
AK310373 testis .o 1 to 982 2 to 983 exact tiling clone,   983/983
(100 %)
4 diff
(99.6 %id)
DB065811 testis .o 1 to 570 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DA230658 brain .p 1 to 569 2 to 570 exact tiling clone, capped   569/569
(100 %)
1 diff
(99.9 %id)
CD242673 brain, Pituitary .q 1 to 818 1 to 823 exact tiling clone,   823/859
(95 %)
14 diff
(98.4 %id)
Z43857 brain, total brain .q 45 to 390 1 to 346   tiling clone,   346/346
(100 %)
0 diff
(100 %id)
F07089 brain, total brain .q 45 to 289 1 to 245       245/245
(100 %)
0 diff
(100 %id)
Z39923 brain, total brain .q 1469 to 1782 314 to 1   tiling clone,   314/314
(100 %)
2 diff
(99.4 %id)
F03363 brain, total brain .q 1590 to 1782 193 to 1       193/194
(99 %)
0 diff
(100 %id)
DA193472 amygdala .r 1 to 598 2 to 599 exact tiling clone, capped   598/598
(100 %)
1 diff
(99.9 %id)
DA287059 corpus callosum .s-u 1 to 546 2 to 547 exact tiling clone, capped   546/546
(100 %)
1 diff
(99.9 %id)
AB209681 brain Gene RAPGEF4, variant not shown         This clone was ignored    
AV708028 adrenal gland Gene RAPGEF4, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
AK294997 brain Gene RAPGEF4, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
AK295002 brain Gene RAPGEF4, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
DB299065 cerebellum Gene RAPGEF4, variant not shown         This clone was ignored    
DA100279 cerebellum Gene RAPGEF4, variant not shown       capped This clone was ignored    
DB311802 thalamus Gene RAPGEF4, variant not shown         This clone was ignored    
DA391148 thalamus Gene RAPGEF4, variant not shown       capped This clone was ignored    
DB317548 brain Gene RAPGEF4, variant not shown         This clone was ignored    
DA527905 brain Gene RAPGEF4, variant not shown       capped This clone was ignored    
DB073210 testis Gene RAPGEF4, variant not shown       capped This clone was ignored    
DB286467 uterus Gene RAPGEF4, variant not shown       capped This clone was ignored    
DB352803 uterus Gene RAPGEF4, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI