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Gene RAP1GDS1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
535 supporting clones for gene RAP1GDS1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC302082   .a -9 to 538 1 to 548       548/548
(100 %)
0 diff
(100 %id)
DA510876 brain .a -8 to 577 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA283824 corpus callosum .a 1 to 593 2 to 594   tiling clone, capped   593/593
(100 %)
0 diff
(100 %id)
DC411797 kidney, tumor tissue .a 2 to 565 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DA482370   .a 21 to 594 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB174336 kidney, tumor tissue .a 21 to 591 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA052145   .a 24 to 621 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
DC412437 kidney, tumor tissue .a 34 to 561 1 to 528       528/528
(100 %)
3 diff
(99.5 %id)
DA554749   .a 35 to 570 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
CN308678 embryonic stem cells, cell lines H1, H7, andH9 .a 45 to 574 1 to 529       529/529
(100 %)
6 diff
(98.9 %id)
DA475766   .a 55 to 629 2 to 576   capped   575/576
(99 %)
1 diff
(99.9 %id)
DA484821 brain .a 55 to 618 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB272858 uterus .a 55 to 561 2 to 508   capped   507/507
(100 %)
1 diff
(99.9 %id)
DA531044 brain .a 57 to 664 2 to 609   capped   608/608
(100 %)
0 diff
(100 %id)
DA171834 amygdala .a 59 to 624 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA771333 brain .a 59 to 625 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA478609   .a 65 to 643 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
DB236428 trachea .a 69 to 635 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
BX333832 Neuroblastoma Cot 50-normalized .a 80 to 849 1 to 770       770/770
(100 %)
3 diff
(99.7 %id)
CD683563 normal nasopharynx .a 86 to 625 28 to 567       540/567
(95 %)
7 diff
(98.8 %id)
DA234287 brain .a 90 to 675 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA506895 brain .a 90 to 647 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DB227968 trachea .a 90 to 656 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB243132 stomach, tumor tissue .a 90 to 656 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA543121   .a 98 to 653 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
BP218457 caudate nucleus .a 120 to 701 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
BC098269 PCR rescued clones .a 121 to 2212 1 to 2092 E238G tiling clone,   2092/2092
(100 %)
2 diff
(100.0 %id)
DA649641   .a 123 to 652 2 to 532   capped   531/531
(100 %)
2 diff
(99.7 %id)
TI_1948147002   .a 158 to 932 118 to 894       777/1310
(59 %)
37 diff
(97.2 %id)
TI_1948147316   .a 159 to 808 125 to 777       653/1219
(53 %)
25 diff
(98.0 %id)
CV026622 mixed .a 169 to 838 1 to 665       659/686
(96 %)
6 diff
(99.2 %id)
TI_1948147001   .a 172 to 808 138 to 776       639/1256
(50 %)
15 diff
(98.9 %id)
TI_1948147319   .a 172 to 777 133 to 744       612/1122
(54 %)
21 diff
(98.2 %id)
TI_1948147969   .a 172 to 1076 126 to 1032   tiling clone,   907/1247
(72 %)
28 diff
(97.8 %id)
DA193052 amygdala .a 173 to 595 186 to 608   capped   607/607
(100 %)
2 diff
(99.7 %id)
DA630809 Kidney .a 173 to 566 187 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA678354   .a 173 to 862 187 to 871   capped   870/870
(100 %)
12 diff
(98.7 %id)
DC365231   .a 173 to 562 187 to 576       576/576
(100 %)
0 diff
(100 %id)
NM_001100426.1   .a 173 to 3737 195 to 3759 exact RefSeq, AAA   3759/3759
(100 %)
0 diff
(100 %id)
DC405276 thymus .a 173 to 552 187 to 566       566/566
(100 %)
0 diff
(100 %id)
DC424014 uterus .a 173 to 551 187 to 565       565/565
(100 %)
1 diff
(99.9 %id)
TI_1948147642   .a 174 to 807 142 to 779       638/1330
(47 %)
19 diff
(98.6 %id)
AW821184 stomach .a 175 to 652 34 to 511       478/511
(93 %)
11 diff
(97.9 %id)
BC001816 Muscle, rhabdomyosarcoma .b 72 to 2539 1 to 2468 S57T tiling clone, available from MGC, AAA   2468/2468
(100 %)
1 diff
(100.0 %id)
BC001851 Muscle, rhabdomyosarcoma .b 72 to 2539 1 to 2468   available from MGC, AAA   2468/2468
(100 %)
1 diff
(100.0 %id)
BT006837   .b 169 to 1990 1 to 1822       1822/1824
(99 %)
2 diff
(99.9 %id)
NM_021159.4   .b 173 to 3734 195 to 3756 exact RefSeq, AAA   3756/3756
(100 %)
0 diff
(100 %id)
TI_1948147970   .b 1077 to 2007 1044 to 110       935/1164
(80 %)
17 diff
(98.6 %id)
TI_1948147645   .b 1093 to 2007 1028 to 107       922/1222
(75 %)
77 diff
(93.7 %id)
TI_1948147003   .b 1210 to 2007 918 to 117       802/1306
(61 %)
13 diff
(99.1 %id)
TI_1948147321   .b 1210 to 2007 909 to 108       802/1344
(59 %)
5 diff
(99.7 %id)
TI_1948147322   .b 1210 to 2007 928 to 121       808/1425
(56 %)
25 diff
(98.3 %id)
TI_1948147971   .b 1210 to 2007 906 to 109       798/1286
(62 %)
7 diff
(99.5 %id)
TI_1948147644   .b 1213 to 2007 904 to 109       796/1202
(66 %)
14 diff
(98.9 %id)
TI_1948147318   .b 1215 to 2007 922 to 123       800/1364
(58 %)
33 diff
(97.6 %id)
CB136170 Liver .b 1261 to 1900 1 to 640       640/640
(100 %)
0 diff
(100 %id)
F05663 brain, total brain .b 1342 to 1601 1 to 260       260/260
(100 %)
0 diff
(100 %id)
H06216 whole brain .b 1347 to 1485 1 to 139       139/139
(100 %)
0 diff
(100 %id)
H06217 whole brain .b 2214 to 2541 338 to 8       331/490
(67 %)
0 diff
(100 %id)
F01921 brain, total brain .b 2263 to 2539 277 to 1       277/277
(100 %)
0 diff
(100 %id)
DC299669   .c -11 to 552 1 to 564       564/564
(100 %)
1 diff
(99.9 %id)
DC327966 caudate nucleus .c -9 to 562 1 to 572       572/572
(100 %)
2 diff
(99.7 %id)
DC333626 hippocampus .c -9 to 554 1 to 564       564/564
(100 %)
1 diff
(99.9 %id)
DC353119 brain .c -9 to 546 1 to 556       556/556
(100 %)
0 diff
(100 %id)
DC378231   .c -9 to 551 1 to 561       561/561
(100 %)
1 diff
(99.9 %id)
DC389453 Spleen .c -9 to 561 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DA290186 hippocampus .c -8 to 574 2 to 584   tiling clone, capped   583/583
(100 %)
0 diff
(100 %id)
BP282570 bone marrow .c -8 to 573 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DB111897 thymus .c -8 to 581 2 to 591   capped   590/590
(100 %)
2 diff
(99.7 %id)
DC343825 thalamus .c 1 to 549 4 to 553       553/553
(100 %)
2 diff
(99.7 %id)
CA336158 anterior rhombomeres 1-4 (4 pooled) .c 14 to 548 1 to 535       535/535
(100 %)
2 diff
(99.7 %id)
BM828958 stomach .c 17 to 713 1 to 697       697/697
(100 %)
3 diff
(99.6 %id)
DA273953 corpus callosum .c 21 to 572 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA325527 hippocampus .c 21 to 666 2 to 648   capped   647/647
(100 %)
1 diff
(99.9 %id)
DA510135 brain .c 21 to 570 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA772370 brain .c 21 to 602 2 to 583   capped   582/582
(100 %)
2 diff
(99.7 %id)
DA825859 pericardium .c 21 to 596 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DC321179 brain .c 23 to 538 1 to 516       516/516
(100 %)
0 diff
(100 %id)
DC356230   .c 23 to 546 1 to 524       524/524
(100 %)
0 diff
(100 %id)
DA648900   .c 30 to 590 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA474596   .c 34 to 599 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
TI_44185199   .c 39 to 788 24 to 778       755/778
(97 %)
13 diff
(98.4 %id)
DA166033 amygdala .c 41 to 608 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
AW149562 brain, medulloblastoma .c 41 to 557 1 to 518     Submitted on the opposite strand 518/518
(100 %)
2 diff
(99.7 %id)
AW293980   .c 42 to 600 1 to 558     Submitted on the opposite strand 558/558
(100 %)
5 diff
(99.2 %id)
DA627234 Kidney .c 44 to 578 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
BI522512 brain .c 45 to 788 1 to 749       749/749
(100 %)
7 diff
(99.1 %id)
DA153477 amygdala .c 55 to 629 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA192994 amygdala .c 55 to 637 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
AK055032 brain .c 56 to 2532 1 to 2477 A66V L385F tiling clone, available from FLJ,   2477/2477
(100 %)
4 diff
(99.9 %id)
DA391387 thalamus .c 56 to 627 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
BP280858   .c 56 to 636 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
DA197204 brain .c 57 to 924 2 to 860   capped   861/859
(100 %)
20 diff
(97.7 %id)
BM807479 brain, hippocampus .c 63 to 909 15 to 866       852/1171
(72 %)
23 diff
(98.1 %id)
DA518296 brain .c 65 to 598 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
BI917912 brain .c 65 to 835 1 to 770       770/771
(99 %)
9 diff
(98.9 %id)
TI_57242507   .c 65 to 835 68 to 837       770/838
(91 %)
15 diff
(98.3 %id)
DB163900 thymus .c 65 to 669 2 to 606   capped   605/605
(100 %)
0 diff
(100 %id)
DA496561 brain .c 67 to 642 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA171476 amygdala .c 69 to 639 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA291541 hippocampus .c 69 to 637 2 to 571   capped   570/570
(100 %)
3 diff
(99.5 %id)
DN990643 brain, whole brain .c 69 to 699 1 to 631       631/631
(100 %)
4 diff
(99.4 %id)
BX446603 neuroblastoma .c 76 to 1067 1 to 991       991/991
(100 %)
3 diff
(99.7 %id)
AI830810 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .c 80 to 779 1 to 700     Submitted on the opposite strand 700/704
(99 %)
24 diff
(96.6 %id)
BM799940 eye, retinoblastoma .c 80 to 1075 60 to 1063       1004/1125
(89 %)
37 diff
(96.8 %id)
BG419298 Kidney, renal cell adenocarcinoma .c 81 to 805 1 to 729       729/775
(94 %)
18 diff
(97.7 %id)
BX460694 brain, fetal brain .c 82 to 1055 1 to 970       970/970
(100 %)
6 diff
(99.4 %id)
DA299414 hippocampus .c 90 to 634 17 to 561   capped   545/545
(100 %)
0 diff
(100 %id)
DA679130   .c 90 to 591 2 to 504   capped   503/503
(100 %)
1 diff
(99.9 %id)
DA938885 Spleen .c 90 to 671 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
BE897208 melanotic melanoma, skin .c 96 to 676 1 to 580       580/729
(79 %)
4 diff
(99.5 %id)
BP312927 mammary gland .c 107 to 731 1 to 624       624/624
(100 %)
7 diff
(98.9 %id)
BE621967 melanotic melanoma, skin .c 114 to 779 1 to 667       667/830
(80 %)
9 diff
(99.0 %id)
BP235389 coronary artery .c 122 to 703 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DA258812 caudate nucleus .c 125 to 683 2 to 561   capped   560/560
(100 %)
3 diff
(99.5 %id)
DA503823 brain .c 125 to 685 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA656081   .c 125 to 676 2 to 554   capped   553/566
(97 %)
4 diff
(99.3 %id)
DB277738 uterus .c 125 to 676 2 to 554   capped   553/558
(99 %)
2 diff
(99.7 %id)
DA731416   .c 144 to 969 2 to 822   capped   821/821
(100 %)
9 diff
(99.0 %id)
AF215923   .c 169 to 1992 1 to 1824 N394D A593R     1824/1824
(100 %)
4 diff
(99.8 %id)
AF237413 peripheral blood .c 169 to 1992 1 to 1824 T376P tiling clone,   1824/1824
(100 %)
1 diff
(100.0 %id)
AW582705 stomach .c 172 to 701 52 to 581       528/584
(90 %)
18 diff
(97.0 %id)
DC300071   .c 173 to 560 187 to 574       574/574
(100 %)
1 diff
(99.9 %id)
DC316800 amygdala .c 173 to 536 187 to 550       550/550
(100 %)
0 diff
(100 %id)
DA504080 brain .c 173 to 570 187 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA530514 brain .c 173 to 587 187 to 601   capped   600/600
(100 %)
0 diff
(100 %id)
DC360030   .c 173 to 558 187 to 572       572/572
(100 %)
0 diff
(100 %id)
NM_001100427.1   .c 173 to 3734 195 to 3756 exact RefSeq, AAA   3756/3756
(100 %)
0 diff
(100 %id)
DA736493   .c 173 to 794 187 to 814   capped   813/815
(99 %)
16 diff
(98.1 %id)
DC387845 small intestine .c 173 to 546 187 to 560       560/560
(100 %)
0 diff
(100 %id)
DC388522 small intestine .c 173 to 558 187 to 573       573/573
(100 %)
1 diff
(99.9 %id)
DC412194 kidney, tumor tissue .c 173 to 547 187 to 561       561/561
(100 %)
0 diff
(100 %id)
DC415927 trachea .c 173 to 537 187 to 551       551/551
(100 %)
0 diff
(100 %id)
DC423412 uterus .c 173 to 547 187 to 561       561/561
(100 %)
1 diff
(99.9 %id)
BI048001 stomach .c 176 to 626 53 to 503       449/503
(89 %)
10 diff
(98.1 %id)
DA161061 amygdala .c 186 to 748 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB103775 thymus .c 257 to 805 2 to 551   capped   550/563
(97 %)
1 diff
(99.9 %id)
BE019260 muscle, rhabdomyosarcoma .c 269 to 693 1 to 425       425/427
(99 %)
25 diff
(94.2 %id)
BU902525 leiomyosarcoma, uterus .c 272 to 929 50 to 715       666/976
(68 %)
23 diff
(97.7 %id)
DB203208 trachea .c 279 to 838 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DB198161 trachea .c 439 to 1010 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA524446 brain .c 482 to 1041 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
BP331765 renal proximal tubule .c 600 to 1190 1 to 591       591/591
(100 %)
2 diff
(99.7 %id)
AA349424 brain .c 650 to 1034 1 to 386       386/386
(100 %)
3 diff
(99.3 %id)
DB363585   .c 1796 to 2539 743 to 1   tiling clone,   743/786
(94 %)
5 diff
(99.4 %id)
DB368984   .c 1993 to 2539 557 to 1       557/557
(100 %)
15 diff
(97.4 %id)
DB303652 brain .c 1997 to 2532 536 to 1       536/538
(99 %)
12 diff
(97.8 %id)
BE205928 muscle, rhabdomyosarcoma .c 2139 to 2541 406 to 3   tiling clone,   404/406
(99 %)
0 diff
(100 %id)
DC323668 brain .d -9 to 562 1 to 572       572/572
(100 %)
0 diff
(100 %id)
DC331477 hippocampus .d -9 to 539 1 to 549       549/549
(100 %)
0 diff
(100 %id)
DC424434   .d -9 to 819 1 to 823   tiling clone,   823/826
(99 %)
10 diff
(98.8 %id)
DC411338 kidney, tumor tissue .d -9 to 561 1 to 572       572/572
(100 %)
1 diff
(99.9 %id)
DC337616 substantia nigra .d 19 to 602 1 to 584       584/584
(100 %)
2 diff
(99.7 %id)
AK295156 brain .d 20 to 2104 1 to 2086 Q385R R420G tiling clone,   2086/2086
(100 %)
5 diff
(99.8 %id)
DC325093 brain .d 20 to 608 1 to 589       589/589
(100 %)
1 diff
(99.9 %id)
DC331482 hippocampus .d 20 to 574 1 to 555       555/555
(100 %)
1 diff
(99.9 %id)
DC320046 brain .d 23 to 586 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC375619 brain .d 23 to 570 1 to 548       548/548
(100 %)
1 diff
(99.9 %id)
BX385110   .d 51 to 1144 1 to 1079       1079/1083
(99 %)
31 diff
(97.2 %id)
DC316174 amygdala .d 54 to 626 1 to 573       573/573
(100 %)
1 diff
(99.9 %id)
DC329902 hippocampus .d 54 to 626 1 to 573       573/573
(100 %)
0 diff
(100 %id)
BP208974 cerebellum .d 54 to 633 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
DC366609   .d 64 to 582 1 to 519       519/519
(100 %)
0 diff
(100 %id)
DC411804 kidney, tumor tissue .d 90 to 646 1 to 557       557/557
(100 %)
0 diff
(100 %id)
DC352821 brain .d 98 to 635 1 to 538       538/538
(100 %)
0 diff
(100 %id)
DC411755 kidney, tumor tissue .d 120 to 709 1 to 592       592/592
(100 %)
5 diff
(99.2 %id)
BC099845 PCR rescued clones .d 121 to 2065 1 to 1945 exact tiling clone,   1945/1945
(100 %)
1 diff
(100.0 %id)
DC306827 cerebellum .d 173 to 539 187 to 553       553/553
(100 %)
0 diff
(100 %id)
DC319221 brain .d 173 to 565 187 to 579       579/579
(100 %)
0 diff
(100 %id)
DC322698 brain .d 173 to 558 187 to 572       572/572
(100 %)
0 diff
(100 %id)
DC333254 hippocampus .d 173 to 546 187 to 560       560/560
(100 %)
0 diff
(100 %id)
DC353529 brain .d 173 to 563 187 to 577       577/577
(100 %)
0 diff
(100 %id)
NM_001100428.1   .d 173 to 3590 195 to 3612 exact RefSeq, AAA   3612/3612
(100 %)
0 diff
(100 %id)
DC375072 brain .d 173 to 557 187 to 571       571/571
(100 %)
0 diff
(100 %id)
DC427247   .d 1880 to 2395 515 to 1   tiling clone,   515/515
(100 %)
11 diff
(97.9 %id)
DC357529   .e -11 to 548 1 to 560       560/560
(100 %)
1 diff
(99.9 %id)
BI545457 brain, hippocampus .e -11 to 780 8 to 799       792/802
(98 %)
12 diff
(98.6 %id)
TI_44165535   .e -11 to 780 128 to 919       792/922
(85 %)
12 diff
(98.7 %id)
DC347195 tongue, tumor tissue .e -10 to 551 1 to 562       562/562
(100 %)
0 diff
(100 %id)
DC352412 brain .e -10 to 543 1 to 554       554/554
(100 %)
0 diff
(100 %id)
DC303199 cerebellum .e -9 to 563 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DC319493 brain .e -9 to 578 1 to 589       589/589
(100 %)
1 diff
(99.9 %id)
DC330671 hippocampus .e -9 to 563 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DC342559 thalamus .e -9 to 529 1 to 539       539/563
(95 %)
0 diff
(100 %id)
DC352410 brain .e -9 to 533 1 to 543       543/543
(100 %)
1 diff
(99.9 %id)
DC353940 brain .e -9 to 599 1 to 609   tiling clone,   609/609
(100 %)
0 diff
(100 %id)
BP251824 hippocampus .e -9 to 577 1 to 588       588/588
(100 %)
1 diff
(99.9 %id)
DC364369   .e -9 to 555 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
DC374061 brain .e -9 to 518 1 to 528       528/528
(100 %)
0 diff
(100 %id)
DC376082 brain .e -9 to 536 1 to 546       546/546
(100 %)
0 diff
(100 %id)
DC392960 breast, tumor tissue .e -9 to 523 1 to 533       533/533
(100 %)
0 diff
(100 %id)
DB480801 hippocampus .e 1 to 493 5 to 497       497/498
(99 %)
2 diff
(99.6 %id)
DC375038 brain .e 19 to 600 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DC319390 brain .e 20 to 592 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DC337922 substantia nigra .e 20 to 593 1 to 574       574/574
(100 %)
0 diff
(100 %id)
DC341001 thalamus .e 20 to 602 1 to 584       584/584
(100 %)
2 diff
(99.7 %id)
DC341681 thalamus .e 20 to 606 1 to 587       587/587
(100 %)
2 diff
(99.7 %id)
DC314287 amygdala .e 23 to 600 1 to 578       578/578
(100 %)
0 diff
(100 %id)
DC315803 amygdala .e 23 to 576 1 to 554       554/554
(100 %)
0 diff
(100 %id)
DC316195 amygdala .e 23 to 587 1 to 565       565/565
(100 %)
0 diff
(100 %id)
DC329755 corpus callosum .e 23 to 601 1 to 579       579/579
(100 %)
1 diff
(99.9 %id)
DC331682 hippocampus .e 23 to 590 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DC352602 brain .e 23 to 529 1 to 509       509/538
(94 %)
2 diff
(99.7 %id)
BP291066 lung .e 23 to 436 1 to 414       414/569
(72 %)
6 diff
(99.0 %id)
AW451076   .e 42 to 529 1 to 488     Submitted on the opposite strand 488/531
(91 %)
2 diff
(99.7 %id)
DC330268 hippocampus .e 43 to 608 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DC330260 hippocampus .e 54 to 623 1 to 570       570/570
(100 %)
0 diff
(100 %id)
DC375095 brain .e 54 to 593 17 to 557       541/541
(100 %)
1 diff
(99.9 %id)
DC412164 kidney, tumor tissue .e 54 to 625 1 to 572       572/572
(100 %)
0 diff
(100 %id)
DC351980 brain .e 64 to 648 1 to 585       585/585
(100 %)
1 diff
(99.9 %id)
DC374482 brain .e 64 to 637 1 to 574       574/574
(100 %)
0 diff
(100 %id)
DC315299 amygdala .e 65 to 632 1 to 570       570/570
(100 %)
2 diff
(99.7 %id)
DC342765 thalamus .e 65 to 638 1 to 574       574/574
(100 %)
0 diff
(100 %id)
BX395351 Neuroblastoma Cot 50-normalized .e 65 to 1050 1 to 979       979/986
(99 %)
13 diff
(98.7 %id)
DC315848 amygdala .e 66 to 615 1 to 550       550/550
(100 %)
0 diff
(100 %id)
DC363358   .e 66 to 613 1 to 549       549/549
(100 %)
1 diff
(99.9 %id)
DC416554 trachea .e 68 to 641 1 to 574       574/574
(100 %)
0 diff
(100 %id)
BX478685   .e 76 to 643 1 to 568       568/568
(100 %)
3 diff
(99.5 %id)
DC315263 amygdala .e 89 to 652 1 to 565       565/565
(100 %)
1 diff
(99.9 %id)
DC352771 brain .e 89 to 637 1 to 550       550/550
(100 %)
1 diff
(99.9 %id)
DC353639 brain .e 89 to 697 1 to 609       609/609
(100 %)
0 diff
(100 %id)
BI821872 pooled brain, lung, testis .e 99 to 837 1 to 738       738/738
(100 %)
7 diff
(99.1 %id)
TI_57198569   .e 99 to 837 39 to 776       738/776
(95 %)
13 diff
(98.4 %id)
AA234764 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 105 to 401 1 to 297     Submitted on the opposite strand 297/308
(96 %)
0 diff
(100 %id)
BX420929 brain, fetal brain .e 112 to 1068 1 to 956       956/957
(99 %)
10 diff
(99.0 %id)
DC348793   .e 119 to 680 1 to 562       562/562
(100 %)
2 diff
(99.7 %id)
AA760746 germinal center B cell .e 119 to 466 1 to 348     Submitted on the opposite strand 348/348
(100 %)
4 diff
(98.9 %id)
BC098334 PCR rescued clones .e 121 to 2062 1 to 1942 exact     1942/1942
(100 %)
0 diff
(100 %id)
BC099708 PCR rescued clones .e 121 to 2062 1 to 1942 exact     1942/1942
(100 %)
1 diff
(100.0 %id)
DC336922 substantia nigra .e 124 to 715 1 to 593       593/593
(100 %)
4 diff
(99.4 %id)
DC339279 subthalamic nucleus .e 124 to 680 1 to 558       558/558
(100 %)
5 diff
(99.2 %id)
X63465   .e 169 to 1845 1 to 1677 N345D A544R     1677/1677
(100 %)
4 diff
(99.8 %id)
DC298066   .e 173 to 529 188 to 544       544/577
(94 %)
2 diff
(99.7 %id)
DC301331 bladder .e 173 to 557 188 to 572       572/572
(100 %)
0 diff
(100 %id)
DC305192 cerebellum .e 173 to 543 187 to 557       557/557
(100 %)
0 diff
(100 %id)
DC305258 cerebellum .e 173 to 529 187 to 543       543/573
(94 %)
0 diff
(100 %id)
DC314957 amygdala .e 173 to 551 187 to 565       565/565
(100 %)
0 diff
(100 %id)
DC315113 amygdala .e 173 to 567 187 to 581       581/581
(100 %)
0 diff
(100 %id)
DC324594 brain .e 173 to 529 187 to 543       543/574
(94 %)
1 diff
(99.9 %id)
DC329508 corpus callosum .e 173 to 564 187 to 578       578/578
(100 %)
0 diff
(100 %id)
DC332103 hippocampus .e 173 to 593 187 to 607       607/607
(100 %)
0 diff
(100 %id)
DC336758 substantia nigra .e 173 to 569 187 to 583       583/583
(100 %)
0 diff
(100 %id)
DC338504 subthalamic nucleus .e 173 to 529 187 to 543       543/559
(97 %)
2 diff
(99.7 %id)
DC342069 thalamus .e 173 to 327 187 to 341       341/341
(100 %)
0 diff
(100 %id)
DC343689 thalamus .e 173 to 551 187 to 565       565/565
(100 %)
0 diff
(100 %id)
DC348454   .e 173 to 535 188 to 550       550/550
(100 %)
0 diff
(100 %id)
DC348565   .e 173 to 535 188 to 550       550/550
(100 %)
0 diff
(100 %id)
DC351905 brain .e 173 to 548 187 to 562       562/562
(100 %)
0 diff
(100 %id)
DC352432 brain .e 173 to 521 187 to 535       535/535
(100 %)
1 diff
(99.9 %id)
DC352627 brain .e 173 to 529 187 to 544       544/554
(98 %)
2 diff
(99.7 %id)
DC353947 brain .e 173 to 593 187 to 607       607/607
(100 %)
0 diff
(100 %id)
BJ993111 hepatoblastoma .e 173 to 586 187 to 600       600/600
(100 %)
0 diff
(100 %id)
NM_001100429.1   .e 173 to 3587 195 to 3609 exact RefSeq, AAA   3609/3609
(100 %)
0 diff
(100 %id)
DC367998   .e 173 to 533 195 to 555       555/555
(100 %)
1 diff
(99.9 %id)
DC372065   .e 173 to 519 194 to 540       540/540
(100 %)
0 diff
(100 %id)
DC374335 brain .e 173 to 533 187 to 547       547/547
(100 %)
0 diff
(100 %id)
DC376192 brain .e 173 to 526 187 to 540       540/540
(100 %)
0 diff
(100 %id)
DC376355 brain .e 173 to 534 187 to 548       548/548
(100 %)
1 diff
(99.9 %id)
DC377100 brain .e 173 to 536 187 to 550       550/550
(100 %)
0 diff
(100 %id)
DC377632 brain .e 173 to 555 187 to 569       569/569
(100 %)
0 diff
(100 %id)
BM835384 stomach .e 173 to 496 187 to 510       510/510
(100 %)
0 diff
(100 %id)
DC411303 kidney, tumor tissue .e 173 to 537 187 to 551       551/551
(100 %)
0 diff
(100 %id)
DC412413 kidney, tumor tissue .e 173 to 543 187 to 557       557/557
(100 %)
1 diff
(99.9 %id)
DC422141 uterus .e 173 to 534 187 to 548       548/548
(100 %)
0 diff
(100 %id)
AK297543 brain .e 281 to 2280 1 to 1999   tiling clone,   1999/1999
(100 %)
1 diff
(100.0 %id)
DC352924 brain .e 281 to 849 1 to 569       569/569
(100 %)
2 diff
(99.7 %id)
AK311243 substantia nigra .e 294 to 1669 1 to 1376       1376/1376
(100 %)
3 diff
(99.8 %id)
DC337414 substantia nigra .e 294 to 718 1 to 425       425/432
(98 %)
3 diff
(99.4 %id)
BP291260 lung .e 409 to 925 1 to 517       517/582
(88 %)
4 diff
(99.4 %id)
BM928237 brain .e 431 to 1311 1 to 888       888/1080
(82 %)
20 diff
(98.2 %id)
DC329689 corpus callosum .e 466 to 1015 1 to 552       552/552
(100 %)
2 diff
(99.7 %id)
BU942154 mixed (pool of 40 RNAs) .e 514 to 1191 1 to 682       682/714
(95 %)
8 diff
(98.9 %id)
DA388467 thalamus .e 518 to 1103 2 to 587   capped   586/587
(99 %)
1 diff
(99.9 %id)
DA588240 lung .e 528 to 898 237 to 607   capped   371/606
(61 %)
6 diff
(99.1 %id)
BP254111 Kidney .e 529 to 1060 38 to 570       533/575
(92 %)
9 diff
(98.5 %id)
DA690569   .e 550 to 1103 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
T55786 fetal spleen, Spleen .e 581 to 876 1 to 298       298/362
(82 %)
12 diff
(96.7 %id)
BG026762 Bone, osteosarcoma, cell line .e 594 to 1303 1 to 702       703/925
(76 %)
24 diff
(97.5 %id)
DA601578   .e 645 to 1212 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BJ993112 hepatoblastoma .e 1848 to 2356 509 to 1       509/509
(100 %)
0 diff
(100 %id)
T55743 fetal spleen, Spleen .e 1963 to 2392 438 to 1   tiling clone,   438/439
(99 %)
8 diff
(98.2 %id)
DA579847   .f 1 to 554 2 to 556   tiling clone, capped   555/555
(100 %)
1 diff
(99.9 %id)
F07939 brain, total brain .f 403 to 721 1 to 319       319/319
(100 %)
0 diff
(100 %id)
BG696741 skin .f 404 to 1135 1 to 737   tiling clone,   737/761
(96 %)
9 diff
(98.9 %id)
Z41007 brain, total brain .f 1887 to 2201 314 to 1   tiling clone,   314/314
(100 %)
1 diff
(99.7 %id)
DC301939   .g -9 to 499 1 to 509       509/509
(100 %)
0 diff
(100 %id)
DC331731 hippocampus .g -9 to 532 1 to 542       542/562
(96 %)
1 diff
(99.9 %id)
DC340103 thalamus .g -9 to 525 1 to 535   tiling clone,   535/535
(100 %)
0 diff
(100 %id)
DB444714 testis .g 1 to 406 5 to 412       412/422
(97 %)
4 diff
(99.1 %id)
DC332648 hippocampus .g 20 to 532 1 to 513       513/548
(93 %)
0 diff
(100 %id)
BP307603 brain .g 32 to 618 1 to 587       587/587
(100 %)
2 diff
(99.7 %id)
AW444598   .g 42 to 463 1 to 422     Submitted on the opposite strand 422/422
(100 %)
0 diff
(100 %id)
BG422831 Kidney, renal cell adenocarcinoma .g 75 to 743 1 to 675   tiling clone,   675/1179
(57 %)
14 diff
(98.9 %id)
AL135523 melanoma (MeWo cell line) .g 78 to 329 1 to 259       259/259
(100 %)
9 diff
(96.6 %id)
AY376900   .g 169 to 1719 1 to 1551       1551/1551
(100 %)
12 diff
(99.3 %id)
DC302817 cerebellum .g 173 to 553 187 to 567       567/567
(100 %)
1 diff
(99.9 %id)
DC315182 amygdala .g 173 to 536 187 to 550       550/550
(100 %)
0 diff
(100 %id)
DC320079 brain .g 173 to 535 187 to 549       549/549
(100 %)
0 diff
(100 %id)
DC347424 tongue, tumor tissue .g 173 to 543 187 to 557       557/567
(98 %)
8 diff
(98.6 %id)
DC349626 brain .g 173 to 511 187 to 525       525/525
(100 %)
0 diff
(100 %id)
NM_001100430.1   .g 173 to 3461 195 to 3483 exact RefSeq, AAA   3483/3483
(100 %)
0 diff
(100 %id)
BI048137 stomach .g 179 to 385 20 to 233       214/243
(88 %)
14 diff
(94.3 %id)
AA090686   .g 215 to 522 1 to 303       303/308
(98 %)
10 diff
(96.8 %id)
AW793390 uterus .g 391 to 537 154 to 8       149/154
(96 %)
0 diff
(100 %id)
BP275697 Kidney .g 544 to 1064 1 to 521       521/582
(89 %)
14 diff
(97.6 %id)
BE541590 cervix .g 586 to 1295 1 to 719       717/764
(93 %)
42 diff
(94.6 %id)
T08323   .g 618 to 966 1 to 350       350/350
(100 %)
2 diff
(99.5 %id)
BM450132 melanotic melanoma, skin .g 622 to 1521 1 to 905   tiling clone,   905/1073
(84 %)
19 diff
(98.3 %id)
DA132687 alzheimer cortex .g 629 to 1184 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
AW961970   .g 632 to 1216 1 to 585       585/592
(98 %)
1 diff
(99.9 %id)
BX349221   .g 659 to 1463 1 to 803       803/916
(87 %)
7 diff
(99.3 %id)
DB169071 kidney, tumor tissue .g 666 to 1249 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
BE089929 breast .g 691 to 1166 7 to 483       477/483
(98 %)
10 diff
(98.0 %id)
CA454928   .g 710 to 1591 1 to 885       885/897
(98 %)
9 diff
(99.0 %id)
BP254832 Kidney .g 750 to 1332 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
BG121196 adenocarcinoma, cell line, Liver .g 751 to 1463 1 to 718       718/935
(76 %)
35 diff
(96.3 %id)
BF244934 brain, glioblastoma .g 784 to 1436 1 to 636       637/873
(72 %)
27 diff
(97.0 %id)
BQ953292 epidermoid carcinoma, cell line, lung .g 799 to 1597 1 to 806       806/975
(82 %)
24 diff
(97.6 %id)
R51677 whole brain .g 879 to 1337 1 to 460       460/525
(87 %)
19 diff
(96.4 %id)
CB123119 Liver .g 937 to 1318 1 to 382       382/382
(100 %)
0 diff
(100 %id)
T27797 colon, endothelial .g 950 to 1244 1 to 300       297/301
(98 %)
7 diff
(97.7 %id)
BF217372 brain, glioblastoma .g 961 to 1668 1 to 698       698/873
(79 %)
24 diff
(97.3 %id)
BP203529 coronary artery .g 984 to 1565 1 to 582       582/582
(100 %)
0 diff
(100 %id)
AA780404 schizophrenic brain S-11 frontal lobe .g 994 to 1455 1 to 462     Submitted on the opposite strand 462/462
(100 %)
5 diff
(99.0 %id)
CN308679 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .g 1013 to 1695 1 to 683       683/683
(100 %)
0 diff
(100 %id)
FN107097 breast carcinoma .g 1019 to 1109 1 to 89       89/90
(98 %)
3 diff
(96.7 %id)
BF802754 colon_ins .g 1077 to 1286 1 to 207       207/221
(93 %)
8 diff
(96.4 %id)
BF803194 colon_ins .g 1083 to 1286 18 to 221       204/235
(86 %)
9 diff
(96.2 %id)
FN165649 breast carcinoma .g 1085 to 1187 1 to 103       103/103
(100 %)
0 diff
(100 %id)
BF818032 colon_ins .g 1093 to 1727 628 to 3     Submitted on the opposite strand 626/687
(91 %)
29 diff
(95.8 %id)
BY996954   .g 1099 to 1767 9 to 677       669/677
(98 %)
6 diff
(99.2 %id)
BP331155 rectum .g 1136 to 1718 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
T81875 liver and spleen .g 1156 to 1463 1 to 311       311/375
(82 %)
5 diff
(98.7 %id)
T95162 liver and spleen .g 1156 to 1463 1 to 309       309/371
(83 %)
2 diff
(99.5 %id)
T95719 liver and spleen .g 1156 to 1442 1 to 290       290/294
(98 %)
6 diff
(98.0 %id)
R54161 whole brain .g 1189 to 1586 1 to 407       407/470
(86 %)
13 diff
(97.3 %id)
DA960120 Spleen .g 1193 to 1740 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
BM793886 Ascites, stomach .g 1200 to 1828 1 to 629       629/629
(100 %)
1 diff
(99.9 %id)
BI223701 cervical carcinoma cell line, cervix .g 1218 to 1871 1 to 653       653/653
(100 %)
1 diff
(99.9 %id)
CF145489 CNCAP(3)T-225 cell line, Prostate .g 1228 to 1658 1 to 429       429/429
(100 %)
7 diff
(98.4 %id)
TI_154177721   .g 1234 to 1939 72 to 780       709/894
(79 %)
36 diff
(96.0 %id)
CF138868 lymph .g 1237 to 1620 14 to 397       384/397
(96 %)
21 diff
(94.8 %id)
CF134539 CNCAP(3)T-225 cell line, Prostate .g 1237 to 1711 14 to 488       475/488
(97 %)
9 diff
(98.2 %id)
TI_154162584   .g 1237 to 1892 85 to 747       663/1176
(56 %)
34 diff
(97.2 %id)
BX282852 liver and spleen .g 1244 to 1620 1 to 378       378/382
(98 %)
8 diff
(98.0 %id)
CR736764 liver and spleen .g 1244 to 1620 1 to 378       378/382
(98 %)
8 diff
(98.0 %id)
CB164488 Liver .g 1247 to 1855 1 to 609       609/609
(100 %)
0 diff
(100 %id)
CD107090 brain, Pituitary .g 1255 to 2097 1 to 850       850/850
(100 %)
10 diff
(98.9 %id)
CD236984 Pituitary .g 1270 to 1950 1 to 680   tiling clone,   680/680
(100 %)
4 diff
(99.5 %id)
BQ325094 colon_ins .g 1286 to 1643 1 to 354       354/407
(86 %)
26 diff
(93.7 %id)
FN136246 breast carcinoma .g 1330 to 1402 1 to 73       73/73
(100 %)
4 diff
(94.6 %id)
AW195934 pooled .g 1334 to 1886 558 to 5       554/565
(98 %)
3 diff
(99.5 %id)
AI609628 normal gingiva (cell line from immortalizedkeratinocytes) .g 1336 to 1848 513 to 1       513/519
(98 %)
11 diff
(97.9 %id)
W28750 eye, retina .g 1336 to 1857 563 to 42       523/648
(80 %)
3 diff
(99.6 %id)
H93184 pineal gland .g 1347 to 1705 1 to 359       359/364
(98 %)
9 diff
(97.6 %id)
W27455 eye, retina .g 1349 to 1760 23 to 439       417/544
(76 %)
14 diff
(97.5 %id)
W26956 eye, retina .g 1350 to 1824 25 to 499       475/522
(90 %)
13 diff
(97.6 %id)
BI090748 cervix .g 1419 to 2125 1 to 712       712/714
(99 %)
14 diff
(98.1 %id)
CB159040 Liver .g 1431 to 1972 1 to 542       542/542
(100 %)
0 diff
(100 %id)
FN155783 breast carcinoma .g 1433 to 1527 95 to 1     Submitted on the opposite strand 95/95
(100 %)
0 diff
(100 %id)
AA429759   .g 1446 to 1864 8 to 426   fully sequenced,   419/426
(98 %)
7 diff
(98.4 %id)
TI_57152518   .g 1481 to 2266 33 to 819       787/1042
(75 %)
13 diff
(98.8 %id)
BI765360 pooled colon, kidney, stomach .g 1482 to 2266 1 to 786       786/815
(96 %)
7 diff
(99.2 %id)
AI741574 pooled .g 1501 to 2266 785 to 21   AAA   765/765
(100 %)
4 diff
(99.5 %id)
BQ772239 Chondrosarcoma Grade II, Left Pelvis .g 1501 to 2266 779 to 19   AAA   761/761
(100 %)
9 diff
(98.9 %id)
AW118760 pooled .g 1504 to 2268 763 to 2       762/763
(99 %)
4 diff
(99.5 %id)
BQ018689 lung, Metastatic Chondrosarcoma .g 1511 to 2266 772 to 19   AAA   754/754
(100 %)
4 diff
(99.5 %id)
AW197796 pooled .g 1520 to 1886 377 to 5       373/378
(98 %)
3 diff
(99.3 %id)
BM988681 lung, Metastatic Chondrosarcoma .g 1521 to 2266 764 to 19   AAA   746/746
(100 %)
0 diff
(100 %id)
AA770511   .g 1523 to 1886 368 to 5       364/368
(98 %)
0 diff
(100 %id)
BQ014546 Chondrosarcoma, Left Pubic Bone .g 1538 to 2266 746 to 19   AAA   728/728
(100 %)
1 diff
(99.9 %id)
BG194676   .g 1587 to 2253 1 to 667       667/776
(85 %)
5 diff
(99.4 %id)
BG183742   .g 1588 to 2265 1 to 677   AAA   677/677
(100 %)
41 diff
(94.0 %id)
BG185849   .g 1588 to 2259 1 to 670   AAA   670/670
(100 %)
14 diff
(98.0 %id)
BG197215   .g 1588 to 2253 1 to 666       666/790
(84 %)
3 diff
(99.7 %id)
BG209192   .g 1588 to 2253 1 to 666       666/833
(79 %)
8 diff
(99.1 %id)
BG216156   .g 1588 to 2266 1 to 676   AAA   676/676
(100 %)
7 diff
(99.0 %id)
BG204939   .g 1589 to 2268 1 to 677       677/679
(99 %)
8 diff
(98.9 %id)
BE326526 carcinoid, lung .g 1589 to 2265 674 to 1       674/678
(99 %)
15 diff
(97.8 %id)
BE811302 amnion_normal .g 1591 to 1806 237 to 22       216/242
(89 %)
0 diff
(100 %id)
BG211243   .g 1591 to 2223 52 to 682       631/838
(75 %)
36 diff
(95.8 %id)
M61988   .g 1592 to 1929 1 to 341       341/342
(99 %)
6 diff
(98.3 %id)
BE669586 carcinoid, lung .g 1597 to 2268 674 to 2       673/674
(99 %)
0 diff
(100 %id)
BG217113   .g 1598 to 2128 9 to 541   AAA   533/541
(98 %)
6 diff
(98.9 %id)
BG213354   .g 1599 to 2253 11 to 665       655/781
(83 %)
13 diff
(98.4 %id)
CA430602 Cell Line, Chondrosarcoma .g 1599 to 2266 685 to 19   AAA   667/667
(100 %)
1 diff
(99.9 %id)
BG191591   .g 1600 to 2266 11 to 680   AAA   670/680
(98 %)
6 diff
(99.2 %id)
BG212300   .g 1601 to 2253 15 to 665       651/789
(82 %)
13 diff
(98.4 %id)
BG983998 colon_normal .g 1603 to 2038 439 to 2       438/439
(99 %)
0 diff
(100 %id)
AA228135 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .g 1603 to 1934 36 to 367       332/367
(90 %)
6 diff
(98.4 %id)
BG201843   .g 1604 to 2266 15 to 673   AAA   659/673
(97 %)
7 diff
(99.0 %id)
N46474.
matches multiple genes
melanocyte .g 1607 to 1789 1 to 183     also hits gene ETS1 183/189
(96 %)
2 diff
(99.0 %id)
FN147465 breast carcinoma .g 1609 to 1705 99 to 1     Submitted on the opposite strand 99/99
(100 %)
2 diff
(98.0 %id)
BG212301   .g 1619 to 2265 36 to 682       647/834
(77 %)
28 diff
(96.7 %id)
FN120901 breast carcinoma .g 1621 to 1685 1 to 64       64/65
(98 %)
4 diff
(93.9 %id)
BF081341 amnion_normal .g 1627 to 2008 15 to 396       382/396
(96 %)
6 diff
(98.5 %id)
N55396 multiple sclerosis lesions .g 1630 to 1856 1 to 227   fully sequenced,   227/227
(100 %)
3 diff
(98.7 %id)
BF083564 colon .g 1632 to 1940 313 to 5       309/313
(98 %)
0 diff
(100 %id)
CD251102 brain, Pituitary .g 1649 to 2263 646 to 28     Submitted on the opposite strand 619/956
(64 %)
0 diff
(100 %id)
BM991718 Bone, Subchondral Bone .g 1658 to 2266 627 to 19   AAA   609/609
(100 %)
2 diff
(99.7 %id)
BI523264 brain .g 1665 to 2192 546 to 7       540/636
(84 %)
0 diff
(100 %id)
TI_44185201   .g 1665 to 2192 546 to 7       540/636
(84 %)
0 diff
(100 %id)
BQ021595 lung, Metastatic Chondrosarcoma .g 1689 to 2266 596 to 19   AAA   578/578
(100 %)
0 diff
(100 %id)
BF684219 leiomyosarcoma cell line, uterus .g 1717 to 2141 1 to 430       430/450
(95 %)
9 diff
(98.0 %id)
N38899 melanocyte .g 1726 to 2266 551 to 1       551/554
(99 %)
10 diff
(98.2 %id)
BI858311 breast, mammary adenocarcinoma, cell line .g 1728 to 2266 15 to 553   AAA   539/553
(97 %)
6 diff
(99.0 %id)
TI_57187118   .g 1728 to 2266 71 to 609   AAA   539/553
(97 %)
6 diff
(99.0 %id)
BF245109 brain, glioblastoma .g 1731 to 2264 1 to 532   AAA   532/532
(100 %)
7 diff
(98.7 %id)
FN076581 breast carcinoma .g 1735 to 1790 1 to 55       55/56
(98 %)
2 diff
(96.5 %id)
CB857283 anterior tongue, pooled .g 1743 to 2266 79 to 603     Submitted on the opposite strand 525/604
(86 %)
5 diff
(99.2 %id)
AI130685 heart .g 1756 to 2268 514 to 2   tiling clone,   513/514
(99 %)
0 diff
(100 %id)
BM709832 eye, Retina Foveal and Macular .g 1763 to 2148 1 to 386   fully sequenced,   386/386
(100 %)
0 diff
(100 %id)
BF438001 carcinoid, lung .g 1768 to 2268 502 to 2       501/502
(99 %)
0 diff
(100 %id)
AI824053 2 pooled tumors (clear cell type), Kidney .g 1814 to 2268 457 to 3       455/457
(99 %)
0 diff
(100 %id)
R51808 whole brain .g 1831 to 2259 449 to 15   AAA   435/480
(90 %)
12 diff
(97.5 %id)
AI304552 adenocarcinoma, colon .g 1833 to 2266 434 to 1       434/434
(100 %)
0 diff
(100 %id)
DB549592 hippocampus .g 1834 to 2259 1 to 426   AAA Submitted on the opposite strand 426/426
(100 %)
0 diff
(100 %id)
AA442770   .g 1834 to 2272 439 to 1   fully sequenced,   439/439
(100 %)
5 diff
(98.9 %id)
N50636 multiple sclerosis lesions .g 1846 to 2266 425 to 1   fully sequenced,   425/425
(100 %)
7 diff
(98.4 %id)
R54106 whole brain .g 1847 to 2266 438 to 13   AAA   426/436
(97 %)
10 diff
(97.8 %id)
AI361836 B-cell, chronic lymphotic leukemia .g 1848 to 2266 444 to 26   AAA   419/419
(100 %)
0 diff
(100 %id)
T71204 liver and spleen .g 1858 to 2265 418 to 1       418/441
(94 %)
15 diff
(96.6 %id)
EC574118 Prostate .g 1859 to 1971 1 to 114       114/114
(100 %)
4 diff
(96.5 %id)
AI039349   .g 1860 to 2266 421 to 15   AAA   407/407
(100 %)
0 diff
(100 %id)
T95066 liver and spleen .g 1861 to 2266 420 to 6       415/423
(98 %)
0 diff
(100 %id)
AI131118 heart .g 1862 to 2268 409 to 3       407/409
(99 %)
0 diff
(100 %id)
AI693920 pooled .g 1864 to 2268 411 to 7       405/411
(98 %)
0 diff
(100 %id)
AI955882 adenocarcinoma, Pancreas .g 1865 to 2266 403 to 1       403/403
(100 %)
3 diff
(99.3 %id)
AW272531 colon, moderately-differentiated adenocarcinoma .g 1865 to 2268 402 to 1       402/402
(100 %)
2 diff
(99.6 %id)
AW028577 fibrotheoma, ovary .g 1869 to 2266 408 to 11   AAA   398/398
(100 %)
0 diff
(100 %id)
AA716452 pineal gland .g 1875 to 2266 392 to 1       392/392
(100 %)
0 diff
(100 %id)
R51589 whole brain .g 1878 to 2267 401 to 1       401/402
(99 %)
13 diff
(96.8 %id)
AA482916 alveolar rhabdomyosarcoma .g 1881 to 2266 387 to 1       387/394
(98 %)
2 diff
(99.5 %id)
AW023147 cochlea, ear .g 1889 to 2253 8 to 373       366/373
(98 %)
9 diff
(97.6 %id)
T32953 brain .g 1889 to 2266 380 to 1       380/380
(100 %)
2 diff
(99.5 %id)
AL121461 melanoma (MeWo cell line) .g 1906 to 2268 1 to 362       362/362
(100 %)
1 diff
(99.8 %id)
T99223 liver and spleen .g 1949 to 2264 326 to 2       325/326
(99 %)
0 diff
(100 %id)
AI147070 pooled .g 1961 to 2268 312 to 5       308/312
(98 %)
0 diff
(100 %id)
CB857284 anterior tongue, pooled .g 1962 to 2438 478 to 1   tiling clone, Submitted on the opposite strand 478/478
(100 %)
2 diff
(99.6 %id)
FN167948 breast carcinoma .g 1987 to 2083 1 to 96       96/96
(100 %)
1 diff
(99.0 %id)
AA159877 Pancreas .g 2015 to 2079 1 to 65   fully sequenced,   65/65
(100 %)
0 diff
(100 %id)
AW169435 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .g 2029 to 2266 248 to 11   AAA   238/238
(100 %)
0 diff
(100 %id)
AA160876 Pancreas .g 2049 to 2267 219 to 1   fully sequenced,   219/219
(100 %)
0 diff
(100 %id)
FN054868 breast carcinoma .g 2057 to 2163 1 to 108       108/108
(100 %)
1 diff
(99.1 %id)
AA846463   .g 2057 to 2266 222 to 13   AAA   210/210
(100 %)
0 diff
(100 %id)
DV460186 cochlea, ear .g 2062 to 2228 168 to 2     Submitted on the opposite strand 167/168
(99 %)
0 diff
(100 %id)
AW169571 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .g 2073 to 2266 204 to 11   AAA   194/194
(100 %)
1 diff
(99.5 %id)
AI243599 pooled .g 2090 to 2268 186 to 8       179/186
(96 %)
0 diff
(100 %id)
C21391   .g 2092 to 2266 1 to 177       177/177
(100 %)
8 diff
(95.5 %id)
AA904051 colon, colon tumor .g 2117 to 2268 153 to 2       152/153
(99 %)
0 diff
(100 %id)
BU733880 eye, Retina Foveal and Macular .g 2118 to 2273 167 to 12   fully sequenced,   156/167
(93 %)
5 diff
(97.1 %id)
FN090870 breast carcinoma .g 2203 to 2265 1 to 63       63/64
(98 %)
1 diff
(98.5 %id)
FN053671 breast carcinoma .g 2343 to 2448 1 to 106   tiling clone,   106/106
(100 %)
1 diff
(99.1 %id)
AI458931 carcinoid, lung .g 2621 to 3091 1 to 473   tiling clone, Submitted on the opposite strand 473/473
(100 %)
4 diff
(99.2 %id)
BP422456 small intestine .g 2622 to 3095 31 to 504   AAA Submitted on the opposite strand 474/504
(94 %)
6 diff
(98.9 %id)
BM991538 lung, Metastatic Chondrosarcoma .g 2623 to 3225 1 to 603   tiling clone, Submitted on the opposite strand 603/603
(100 %)
0 diff
(100 %id)
BX103757 brain, pineal gland .g 2626 to 2965 345 to 6   AAA Submitted on the opposite strand 340/345
(98 %)
0 diff
(100 %id)
AA782613 parathyroid gland, parathyroid tumor .g 2635 to 3071 1 to 437     Submitted on the opposite strand 437/437
(100 %)
0 diff
(100 %id)
N92500 parathyroid gland, parathyroid tumor .g 2635 to 3131 1 to 491   fully sequenced, Submitted on the opposite strand 491/491
(100 %)
7 diff
(98.6 %id)
W37372 parathyroid gland, parathyroid tumor .g 2635 to 3068 1 to 436     Submitted on the opposite strand 436/436
(100 %)
2 diff
(99.6 %id)
AA854364 parathyroid gland, parathyroid tumor .g 2635 to 3023 1 to 389     Submitted on the opposite strand 389/389
(100 %)
0 diff
(100 %id)
AI089105 pooled .g 2635 to 3043 1 to 409     Submitted on the opposite strand 409/409
(100 %)
0 diff
(100 %id)
AI033705 parathyroid gland, parathyroid tumor .g 2635 to 3124 1 to 490     Submitted on the opposite strand 490/490
(100 %)
0 diff
(100 %id)
BF221611 Prostate .g 2641 to 3157 1 to 517     Submitted on the opposite strand 517/517
(100 %)
0 diff
(100 %id)
FN170161 breast carcinoma .g 2686 to 2801 1 to 113       113/113
(100 %)
4 diff
(96.5 %id)
H56176 pineal gland .g 2701 to 2965 1 to 267   fully sequenced, Submitted on the opposite strand 267/267
(100 %)
5 diff
(98.2 %id)
TI_154131916   .g 2703 to 3459 844 to 93   tiling clone, AAA   752/945
(79 %)
14 diff
(98.6 %id)
BU616603 Cell Line, Chondrosarcoma .g 2730 to 3461 746 to 19   AAA   728/728
(100 %)
6 diff
(99.2 %id)
BP424677 small intestine .g 2736 to 3248 1 to 513     Submitted on the opposite strand 513/513
(100 %)
0 diff
(100 %id)
BU616795 Cell Line, Chondrosarcoma .g 2753 to 3461 727 to 19   AAA   709/709
(100 %)
4 diff
(99.5 %id)
AW800520 uterus .g 2776 to 2891 10 to 125       116/134
(86 %)
1 diff
(99.3 %id)
AW381249 head_neck .g 2796 to 3157 362 to 1       362/362
(100 %)
5 diff
(98.7 %id)
AW381267 head_neck .g 2796 to 3124 332 to 4       329/332
(99 %)
0 diff
(100 %id)
BE812731 amnion_normal .g 2796 to 3169 4 to 376       373/376
(99 %)
6 diff
(98.5 %id)
BF326020 amnion_normal .g 2809 to 3239 1 to 428       428/432
(99 %)
19 diff
(95.7 %id)
CA418291 Bone, Human Chondrosarcoma Cell Line .g 2848 to 3459 630 to 19   AAA   612/612
(100 %)
0 diff
(100 %id)
AW391836 stomach .g 2875 to 3218 1 to 344       344/344
(100 %)
3 diff
(99.2 %id)
H56393 pineal gland .g 2896 to 2971 80 to 1   fully sequenced, Submitted on the opposite strand 80/80
(100 %)
8 diff
(90.0 %id)
AI800264 Kidney .g 3074 to 3461 399 to 12   tiling clone, AAA   388/388
(100 %)
3 diff
(99.3 %id)
W38825 parathyroid gland, parathyroid tumor .g 3101 to 3457 361 to 1   fully sequenced, Submitted on the opposite strand 361/361
(100 %)
2 diff
(99.5 %id)
W37371 parathyroid gland, parathyroid tumor .g 3112 to 3408 302 to 1     Submitted on the opposite strand 302/312
(96 %)
5 diff
(98.4 %id)
CA428907 Cell Line, Chondrosarcoma .g 3223 to 3461 257 to 19   AAA   239/239
(100 %)
1 diff
(99.6 %id)
DA654654   .h 1 to 570 2 to 571   tiling clone, capped   570/570
(100 %)
0 diff
(100 %id)
DB321779   .h 1886 to 2421 537 to 1   tiling clone,   537/537
(100 %)
1 diff
(99.9 %id)
BX458184 neuroblastoma .i 1 to 781 1 to 781   tiling clone,   781/781
(100 %)
0 diff
(100 %id)
BM016385 breast, mammary adenocarcinoma, cell line .i 598 to 1447 1 to 846   tiling clone,   846/850
(99 %)
30 diff
(96.5 %id)
TI_59394801   .i 598 to 1447 86 to 931       846/850
(99 %)
30 diff
(96.5 %id)
BX458183 neuroblastoma .i 845 to 1641 836 to 40   tiling clone,   797/836
(95 %)
0 diff
(100 %id)
AI052055 parathyroid gland, parathyroid tumor .i 1170 to 1700 535 to 5   tiling clone,   531/535
(99 %)
0 diff
(100 %id)
AA843955 parathyroid gland, parathyroid tumor .i 1219 to 1700 486 to 5       482/486
(99 %)
0 diff
(100 %id)
AI051924 parathyroid gland, parathyroid tumor .i 1231 to 1700 474 to 5       470/474
(99 %)
0 diff
(100 %id)
DB509642 testis .i 1315 to 1697 1 to 384     Submitted on the opposite strand 384/384
(100 %)
16 diff
(95.9 %id)
AI027149 parathyroid gland, parathyroid tumor .i 1315 to 1700 390 to 5       386/390
(98 %)
0 diff
(100 %id)
AA860964 parathyroid gland, parathyroid tumor .i 1319 to 1700 386 to 5       382/386
(98 %)
0 diff
(100 %id)
TI_1948147317   .j 1 to 768 135 to 911 S55T E199D L202P V203C A204C ... tiling clone,   778/1369
(56 %)
66 diff
(95.2 %id)
BM413681 eye, retinoblastoma .k 51 to 850 80 to 886 exact tiling clone,   874/895
(97 %)
26 diff
(97.1 %id)
DA889147   .l 1 to 557 2 to 559   tiling clone, capped   558/558
(100 %)
1 diff
(99.9 %id)
AI084630 senescent fibroblast .l 226 to 946 732 to 12   tiling clone, AAA   721/730
(98 %)
3 diff
(99.6 %id)
CR615990 HeLa cells Cot 25-normalized .m 1 to 934 1 to 934 exact tiling clone,   934/934
(100 %)
0 diff
(100 %id)
BX362695   .m 1 to 934 1 to 934 exact     934/934
(100 %)
3 diff
(99.7 %id)
BX403404   .m 1 to 919 1 to 913 N178I M179W G180V V181L I182F ...     913/913
(100 %)
23 diff
(97.5 %id)
BU927599 mixed (pool of 40 RNAs) .m 375 to 839 1 to 465       465/465
(100 %)
1 diff
(99.8 %id)
BG943988 blood .m 417 to 833 1 to 417       417/417
(100 %)
1 diff
(99.8 %id)
BQ213358 melanotic melanoma, skin .m 755 to 1644 1 to 894   tiling clone,   894/895
(99 %)
24 diff
(97.4 %id)
BX362694   .m 770 to 1743 977 to 1       977/977
(100 %)
28 diff
(97.2 %id)
BQ212559 melanotic melanoma, skin .m 792 to 1526 1 to 739       739/902
(81 %)
18 diff
(98.1 %id)
CR744095 breast .m 941 to 1718 1 to 779       779/779
(100 %)
5 diff
(99.4 %id)
R70447.
matches multiple genes
breast .m 941 to 1298 1 to 363     also hits gene EEPD1 363/403
(90 %)
9 diff
(97.8 %id)
AI708496 colon .m 1363 to 1773 410 to 1   tiling clone,   410/410
(100 %)
2 diff
(99.6 %id)
R69459.
matches multiple genes
breast .m 1541 to 1839 304 to 1   tiling clone, also hits gene EEPD1 304/304
(100 %)
5 diff
(98.4 %id)
BI912741 brain .n 1 to 902 3 to 910 V136C I137N D138L H139T L140I ... tiling clone,   910/943
(96 %)
38 diff
(96.0 %id)
TI_57238175   .n 1 to 902 38 to 945 V136C I137N D138L H139T L140I ...     910/978
(93 %)
45 diff
(95.4 %id)
AI638263 pooled germ cell tumors .n 466 to 1214 746 to 1   tiling clone,   746/750
(99 %)
13 diff
(98.3 %id)
BE865953 bladder, carcinoma, cell line .n 565 to 1238 1 to 685   tiling clone,   685/768
(89 %)
29 diff
(96.3 %id)
FN050603 breast carcinoma .n 678 to 807 130 to 1     Submitted on the opposite strand 130/130
(100 %)
2 diff
(98.5 %id)
FN078208 breast carcinoma .n 919 to 1031 1 to 113       113/118
(95 %)
3 diff
(97.5 %id)
BJ997641 Wilms tumor .n 955 to 1494 540 to 1   tiling clone,   540/540
(100 %)
0 diff
(100 %id)
FN140650 breast carcinoma .n 1020 to 1144 126 to 1     Submitted on the opposite strand 126/126
(100 %)
1 diff
(99.3 %id)
FN140396 breast carcinoma .n 1033 to 1148 113 to 3     Submitted on the opposite strand 111/113
(98 %)
0 diff
(100 %id)
BX102973 melanocyte .n 1440 to 2072 1 to 633   tiling clone, AAA   633/633
(100 %)
0 diff
(100 %id)
N27496 melanocyte .n 1480 to 1876 1 to 400   fully sequenced,   400/400
(100 %)
1 diff
(99.8 %id)
N33971 melanocyte .n 1484 to 1848 1 to 372   fully sequenced,   372/372
(100 %)
5 diff
(98.7 %id)
N29200.
matches multiple genes
melanocyte .n 1498 to 1815 1 to 319     also hits gene korkorbo 319/320
(99 %)
2 diff
(99.4 %id)
N20290 melanocyte .n 1612 to 2071 464 to 1       464/466
(99 %)
4 diff
(99.2 %id)
BE739257 hypernephroma, Kidney .n 1751 to 2431 1 to 678   tiling clone,   678/682
(99 %)
16 diff
(97.7 %id)
N24532 melanocyte .n 1818 to 1943 125 to 1   fully sequenced,   125/125
(100 %)
1 diff
(99.2 %id)
N21220 melanocyte .n 1846 to 2070 228 to 1   fully sequenced,   228/228
(100 %)
1 diff
(99.6 %id)
BE739522 hypernephroma, Kidney .n 2104 to 2851 749 to 1   tiling clone,   749/1028
(72 %)
12 diff
(98.9 %id)
AW519113 adenocarcinoma, Pancreas .n 2395 to 2907 513 to 1   tiling clone,   513/513
(100 %)
1 diff
(99.9 %id)
FN084965 breast carcinoma .n 2452 to 2544 1 to 95       95/96
(98 %)
3 diff
(96.9 %id)
FN163425 breast carcinoma .n 2536 to 2647 1 to 112       112/112
(100 %)
2 diff
(98.3 %id)
DC336693 substantia nigra .o 1 to 563 1 to 564 L27A Q28S T29N R31Q A32G ... tiling clone,   564/564
(100 %)
3 diff
(99.5 %id)
DA617655   .p 1 to 578 2 to 579 exact tiling clone, capped   578/578
(100 %)
0 diff
(100 %id)
BP330552 rectum .q 1 to 582 1 to 582 L80R tiling clone,   582/582
(100 %)
2 diff
(99.7 %id)
DC319754 brain .r 1 to 536 2 to 538 L53X D54G C55L L56S L57A ... tiling clone,   538/538
(100 %)
1 diff
(99.9 %id)
DA650106   .s 1 to 543 2 to 545 E40G T41N S42K E43* tiling clone, capped   544/544
(100 %)
3 diff
(99.5 %id)
DA778106 brain .t 1 to 578 6 to 583 S57G I72T tiling clone, capped   582/582
(100 %)
2 diff
(99.7 %id)
DC359448 lung .u 173 to 556 187 to 570 exact tiling clone,   570/570
(100 %)
0 diff
(100 %id)
DC337666 substantia nigra .va -9 to 550 1 to 560 exact tiling clone,   560/560
(100 %)
0 diff
(100 %id)
BF513563   .va 42 to 535 1 to 494     Submitted on the opposite strand 494/494
(100 %)
0 diff
(100 %id)
BP218283 caudate nucleus .vb 1 to 582 1 to 582 exact tiling clone,   582/582
(100 %)
0 diff
(100 %id)
BX093701 Kidney .vc 1 to 496 1 to 496 exact tiling clone,   496/496
(100 %)
0 diff
(100 %id)
W27719 eye, retina .vc 418 to 857 12 to 454   tiling clone, AAA   446/480
(92 %)
16 diff
(96.7 %id)
AL699236 human skeletal muscle .vd 1 to 560 1 to 560 E24K tiling clone,   560/560
(100 %)
4 diff
(99.3 %id)
BX508104   .ve-u 1 to 646 1 to 646 exact tiling clone,   646/646
(100 %)
0 diff
(100 %id)
DC327634 caudate nucleus .vf 1 to 571 4 to 574 exact tiling clone,   574/574
(100 %)
1 diff
(99.9 %id)
EH337585   .vf 269 to 334 1 to 67       67/67
(100 %)
1 diff
(98.6 %id)
DC354259 brain .vg 1 to 536 9 to 544 exact tiling clone,   544/544
(100 %)
1 diff
(99.9 %id)
AA728792 alveolar rhabdomyosarcoma .vh-u 1 to 208 1 to 208 exact tiling clone,   208/244
(85 %)
2 diff
(99.2 %id)
DB328866 placenta Gene RAP1GDS1, variant not shown         Suspected internal deletion, this clone was ignored    
DA855206 placenta Gene RAP1GDS1, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB327715   Gene RAP1GDS1, variant not shown         This clone was ignored    
DA817720   Gene RAP1GDS1, variant not shown       capped This clone was ignored    
F02392 brain, total brain Gene RAP1GDS1, variant not shown              
F06128 brain, total brain Gene RAP1GDS1, variant not shown              
F03039 brain, total brain Gene RAP1GDS1, variant not shown              
F06775 brain, total brain Gene RAP1GDS1, variant not shown              
BX388213   Gene RAP1GDS1, variant not shown         Suspected internal deletion, this clone was ignored    
BX388214   Gene RAP1GDS1, variant not shown         Suspected internal deletion, this clone was ignored    
DB206017 trachea Gene RAP1GDS1, variant not shown       capped Suspected internal deletion, this clone was ignored    
AI336300 lung Gene RAP1GDS1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
AI913248 Kidney Gene RAP1GDS1, variant not shown         This clone was ignored    
TI_1948147320   Gene RAP1GDS1, variant not shown         This clone was ignored    
TI_1948147643   Gene RAP1GDS1, variant not shown         This clone was ignored    
TI_1948147968   Gene RAP1GDS1, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t, .u, .va, .vb, .vc, .vd, .ve-u, .vf, .vg, .vh-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI