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Gene C3orf63TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
430 supporting clones for gene C3orf63 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK094486 cerebellum .a 1 to 2028 1 to 2028   tiling clone, available from FLJ,   2028/2028
(100 %)
5 diff
(99.8 %id)
DA075749 cerebellum .a 2 to 578 2 to 578   capped   577/577
(100 %)
3 diff
(99.5 %id)
BI559851 testis .a 128 to 687 1 to 560   available from MGC,   560/560
(100 %)
12 diff
(97.9 %id)
TI_44348111   .a 131 to 687 84 to 640       557/640
(87 %)
10 diff
(98.5 %id)
BC070096 testis .a 133 to 5152 1 to 5021 D187N N549D L1205F E1206G R1207K ... tiling clone, available from MGC, AAA   5021/5021
(100 %)
5 diff
(100.0 %id)
DB297734 cerebellum .a 1475 to 2028 556 to 1       556/556
(100 %)
3 diff
(99.5 %id)
AF273053 testis .a 1796 to 5238 1 to 3443   tiling clone, AAA   3443/3443
(100 %)
3 diff
(100.0 %id)
DA252775 caudate nucleus .a 3248 to 3833 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
BP332560 renal proximal tubule .a 3441 to 4022 1 to 582       582/582
(100 %)
5 diff
(99.2 %id)
BP203447 coronary artery .a 3476 to 4040 1 to 565       565/565
(100 %)
4 diff
(99.3 %id)
BX479925   .a 3488 to 4150 1 to 663       663/663
(100 %)
6 diff
(99.1 %id)
CB958732 Pooled-Glandular .a 3525 to 4260 1 to 740       740/741
(99 %)
11 diff
(98.6 %id)
BX957077   .a 3581 to 4224 1 to 644       644/644
(100 %)
0 diff
(100 %id)
BG391254 embryonal carcinoma, cell line, testis .a 3593 to 4359 1 to 784       784/959
(81 %)
44 diff
(95.5 %id)
CB143944 Liver .a 3669 to 4172 1 to 504       504/504
(100 %)
1 diff
(99.9 %id)
BU198889   .a 3718 to 4529 1 to 818       818/998
(81 %)
29 diff
(97.1 %id)
BQ438434 testis .a 3752 to 4544 1 to 798   tiling clone,   798/798
(100 %)
10 diff
(98.8 %id)
EH338381   .a 3767 to 3840 1 to 74       74/76
(97 %)
1 diff
(98.7 %id)
CN421030 embryonic stem cells, cell lines H1, H7, andH9 .a 3773 to 4486 1 to 715       715/715
(100 %)
4 diff
(99.5 %id)
BU177474 bone marrow, from acute myelogenous leukemia .a 3874 to 4645 1 to 780       780/792
(98 %)
20 diff
(97.5 %id)
AI620405 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 4254 to 4669 414 to 1       414/414
(100 %)
2 diff
(99.6 %id)
DB094878 testis .a 4259 to 4828 2 to 572   capped   571/572
(99 %)
3 diff
(99.5 %id)
BX648955 human endometrium .b 1 to 5050 1 to 5050 Q53R E1182G E1221A tiling clone, available from DKFZ, AAA   5050/5050
(100 %)
4 diff
(100.0 %id)
BC129987 PCR rescued clones .b 707 to 5172 1 to 4466   tiling clone,   4466/4466
(100 %)
0 diff
(100 %id)
CT000304 T-Lymphocytes .b 3277 to 4121 1 to 847       847/847
(100 %)
3 diff
(99.7 %id)
NM_001112736.1   .c 1 to 8655 1 to 8296 F1250E L1251Y F1252L RefSeq,   8296/8296
(100 %)
0 diff
(100 %id)
AW204469   .c 63 to 351 290 to 1   tiling clone,   290/290
(100 %)
11 diff
(96.3 %id)
DB146408 thymus .c 89 to 662 2 to 575   tiling clone, capped   574/574
(100 %)
2 diff
(99.7 %id)
AI380577 B-cell, chronic lymphotic leukemia .c 107 to 352 246 to 1       246/246
(100 %)
0 diff
(100 %id)
BE328531 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .c 344 to 783 1 to 440     Submitted on the opposite strand 440/440
(100 %)
1 diff
(99.8 %id)
AI027556 parathyroid gland, parathyroid tumor .c 345 to 890 1 to 546     Submitted on the opposite strand 546/546
(100 %)
3 diff
(99.5 %id)
AI809061 B-cell, chronic lymphotic leukemia .c 345 to 814 1 to 470     Submitted on the opposite strand 470/470
(100 %)
5 diff
(99.0 %id)
TI_157598193   .c 345 to 1121 52 to 820     Submitted on the opposite strand 769/1038
(74 %)
16 diff
(98.5 %id)
TI_158433495   .c 345 to 833 43 to 531     Submitted on the opposite strand 489/1089
(44 %)
14 diff
(98.8 %id)
AW291245   .c 346 to 780 1 to 434     Submitted on the opposite strand 434/442
(98 %)
9 diff
(98.0 %id)
AW296714   .c 346 to 791 1 to 446     Submitted on the opposite strand 446/446
(100 %)
0 diff
(100 %id)
AW298635   .c 346 to 788 1 to 443     Submitted on the opposite strand 443/443
(100 %)
0 diff
(100 %id)
AW297894   .c 346 to 741 1 to 396     Submitted on the opposite strand 396/396
(100 %)
0 diff
(100 %id)
AI199787 placenta .c 363 to 864 1 to 502     Submitted on the opposite strand 502/502
(100 %)
1 diff
(99.9 %id)
AI361856 B-cell, chronic lymphotic leukemia .c 363 to 733 1 to 371     Submitted on the opposite strand 371/371
(100 %)
0 diff
(100 %id)
BF056954 pooled germ cell tumors .c 363 to 826 1 to 464     Submitted on the opposite strand 464/464
(100 %)
1 diff
(99.8 %id)
AW975468   .c 364 to 903 11 to 550       540/550
(98 %)
9 diff
(98.4 %id)
AI693894 carcinoid, lung .c 371 to 740 1 to 370     Submitted on the opposite strand 370/370
(100 %)
1 diff
(99.8 %id)
CN272364 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 377 to 996 1 to 622       622/622
(100 %)
2 diff
(99.7 %id)
AA688083 germinal center B cell .c 379 to 687 1 to 309     Submitted on the opposite strand 309/309
(100 %)
2 diff
(99.4 %id)
AI796833 carcinoid, lung .c 380 to 740 1 to 361     Submitted on the opposite strand 361/361
(100 %)
1 diff
(99.8 %id)
AI971929 fibrotheoma, ovary .c 380 to 876 1 to 497     Submitted on the opposite strand 497/497
(100 %)
1 diff
(99.8 %id)
AA610095   .c 381 to 735 1 to 355     Submitted on the opposite strand 355/355
(100 %)
3 diff
(99.2 %id)
AW968696   .c 387 to 1059 44 to 716       673/716
(93 %)
9 diff
(98.8 %id)
AI000184 Kidney .c 391 to 604 1 to 214     Submitted on the opposite strand 214/214
(100 %)
0 diff
(100 %id)
AA782198 parathyroid gland, parathyroid tumor .c 403 to 841 1 to 439     Submitted on the opposite strand 439/439
(100 %)
0 diff
(100 %id)
AA781770 parathyroid gland, parathyroid tumor .c 403 to 775 1 to 374     Submitted on the opposite strand 374/374
(100 %)
1 diff
(99.8 %id)
H96263 pineal gland .c 403 to 749 1 to 347     Submitted on the opposite strand 347/347
(100 %)
0 diff
(100 %id)
N93085 lung .c 403 to 770 1 to 375     Submitted on the opposite strand 370/375
(98 %)
7 diff
(98.2 %id)
W37756 parathyroid gland, parathyroid tumor .c 403 to 909 1 to 513     Submitted on the opposite strand 513/515
(99 %)
9 diff
(98.3 %id)
AA236165 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 403 to 734 1 to 332     Submitted on the opposite strand 332/332
(100 %)
0 diff
(100 %id)
AA411617 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 403 to 794 1 to 392     Submitted on the opposite strand 392/392
(100 %)
0 diff
(100 %id)
AA429350 ovarian tumor, ovary .c 403 to 819 1 to 417     Submitted on the opposite strand 417/417
(100 %)
0 diff
(100 %id)
AA454677 ovarian tumor, ovary .c 403 to 744 1 to 334     Submitted on the opposite strand 334/401
(83 %)
17 diff
(95.8 %id)
AA743309 germinal center B cell .c 403 to 770 1 to 368     Submitted on the opposite strand 368/368
(100 %)
0 diff
(100 %id)
AA761910 germinal center B cell .c 403 to 734 1 to 332     Submitted on the opposite strand 332/332
(100 %)
0 diff
(100 %id)
AA721371 germinal center B cell .c 403 to 623 1 to 221     Submitted on the opposite strand 221/221
(100 %)
0 diff
(100 %id)
AA731366 germinal center B cell .c 403 to 837 1 to 435     Submitted on the opposite strand 435/443
(98 %)
2 diff
(99.6 %id)
AA723944 pooled .c 403 to 711 1 to 309     Submitted on the opposite strand 309/309
(100 %)
1 diff
(99.7 %id)
AA811532 germinal center B cell .c 403 to 847 1 to 445     Submitted on the opposite strand 445/445
(100 %)
0 diff
(100 %id)
AA906211 pooled .c 403 to 711 1 to 309     Submitted on the opposite strand 309/309
(100 %)
0 diff
(100 %id)
AI028118 parathyroid gland, parathyroid tumor .c 403 to 823 1 to 421     Submitted on the opposite strand 421/421
(100 %)
0 diff
(100 %id)
AI023933 parathyroid gland, parathyroid tumor .c 403 to 853 1 to 452     Submitted on the opposite strand 452/452
(100 %)
1 diff
(99.8 %id)
AI148876 placenta .c 403 to 887 1 to 485     Submitted on the opposite strand 485/485
(100 %)
2 diff
(99.6 %id)
AI269585 pooled .c 403 to 867 1 to 465     Submitted on the opposite strand 465/465
(100 %)
2 diff
(99.6 %id)
AI660171 thymus, pooled .c 403 to 797 1 to 394     Submitted on the opposite strand 394/394
(100 %)
1 diff
(99.8 %id)
AI809141 pooled .c 403 to 972 1 to 571     Submitted on the opposite strand 571/571
(100 %)
1 diff
(99.9 %id)
AI767526 Kidney .c 403 to 891 1 to 490     Submitted on the opposite strand 490/490
(100 %)
1 diff
(99.8 %id)
AI954609 pooled germ cell tumors .c 403 to 941 1 to 539     Submitted on the opposite strand 539/539
(100 %)
1 diff
(99.9 %id)
AW173324 pooled .c 403 to 938 1 to 536     Submitted on the opposite strand 536/536
(100 %)
0 diff
(100 %id)
AW269446 pooled .c 403 to 816 1 to 414     Submitted on the opposite strand 414/414
(100 %)
0 diff
(100 %id)
BE466634 pooled germ cell tumors .c 403 to 834 1 to 432     Submitted on the opposite strand 432/432
(100 %)
0 diff
(100 %id)
BF732466 fibrotheoma, ovary .c 403 to 837 1 to 435     Submitted on the opposite strand 435/442
(98 %)
2 diff
(99.6 %id)
BF732841 fibrotheoma, ovary .c 427 to 735 1 to 310     Submitted on the opposite strand 312/310
(100 %)
9 diff
(97.1 %id)
AW977856   .c 452 to 988 1 to 538       538/538
(100 %)
18 diff
(96.7 %id)
AA767584 germinal center B cell .c 480 to 879 1 to 400     Submitted on the opposite strand 400/400
(100 %)
3 diff
(99.3 %id)
BX091392 parathyroid gland, parathyroid tumor .c 484 to 1221 739 to 1     Submitted on the opposite strand 739/739
(100 %)
2 diff
(99.8 %id)
AL708948 human skeletal muscle .c 519 to 1155 1 to 637       637/637
(100 %)
3 diff
(99.6 %id)
DR157938 human embryonic stem cells differentiated toan early endodermal cell type .c 554 to 1239 1 to 686   tiling clone,   686/686
(100 %)
0 diff
(100 %id)
BF185932 brain, glioblastoma .c 646 to 1262 1 to 615   available from MGC,   615/619
(99 %)
16 diff
(97.5 %id)
BX490130   .c 657 to 916 1 to 261       261/267
(97 %)
4 diff
(98.6 %id)
AA382313 testis .c 663 to 1001 1 to 343       343/384
(89 %)
9 diff
(97.7 %id)
BC014569 Brain, glioblastoma .c 671 to 1776 1 to 1106   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 1106/1123
(98 %)
5 diff
(99.6 %id)
W37974 parathyroid gland, parathyroid tumor .c 675 to 1211 545 to 1     Submitted on the opposite strand 545/568
(95 %)
10 diff
(98.3 %id)
AW956647   .c 694 to 1291 1 to 602       602/607
(99 %)
14 diff
(97.7 %id)
AW956649   .c 694 to 1123 1 to 430       430/484
(88 %)
14 diff
(97.2 %id)
CB121955 Liver .c 948 to 1355 1 to 408       408/408
(100 %)
0 diff
(100 %id)
CB120978 Liver .c 948 to 1108 1 to 161       161/161
(100 %)
1 diff
(99.4 %id)
AA249748   .c 1000 to 1159 1 to 160       160/203
(78 %)
3 diff
(98.6 %id)
CN421029 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 1046 to 1712 1 to 667       667/667
(100 %)
1 diff
(99.9 %id)
BP283039 bone marrow .c 1102 to 1684 1 to 583       583/583
(100 %)
0 diff
(100 %id)
CR745455 germinal center B cell .c 1189 to 1878 696 to 7   tiling clone, Submitted on the opposite strand 690/696
(99 %)
0 diff
(100 %id)
DA789791 brain .c 1192 to 1758 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA215297 brain .c 1245 to 1777 2 to 535   capped   534/534
(100 %)
1 diff
(99.9 %id)
DA458975 tongue, tumor tissue .c 1363 to 1923 2 to 563   capped   562/562
(100 %)
5 diff
(99.2 %id)
W56074 parathyroid gland, parathyroid tumor .c 1367 to 1878 521 to 4     Submitted on the opposite strand 518/531
(97 %)
9 diff
(98.4 %id)
DB131115 thymus .c 1367 to 1912 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
AA287344 germinal center B cell .c 1371 to 1878 532 to 25     Submitted on the opposite strand 508/532
(95 %)
0 diff
(100 %id)
W19197 lung .c 1433 to 1875 449 to 6     Submitted on the opposite strand 444/459
(96 %)
1 diff
(99.8 %id)
AA456123 ovarian tumor, ovary .c 1436 to 1878 458 to 16     Submitted on the opposite strand 443/458
(96 %)
0 diff
(100 %id)
W38634 parathyroid gland, parathyroid tumor .c 1446 to 1878 444 to 9     Submitted on the opposite strand 436/444
(98 %)
5 diff
(98.9 %id)
BG212115   .c 1464 to 2034 1 to 568   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 568/570
(99 %)
14 diff
(97.6 %id)
BP290187 lung .c 1470 to 2048 1 to 578       578/578
(100 %)
3 diff
(99.5 %id)
W24739 lung .c 1504 to 1878 384 to 2     Submitted on the opposite strand 383/475
(80 %)
9 diff
(98.2 %id)
BM478125 lymph, lymphoma, cell line .c 1525 to 2559 1 to 1036   tiling clone,   1036/1037
(99 %)
21 diff
(98.0 %id)
AA428762 ovarian tumor, ovary .c 1534 to 1878 353 to 9     Submitted on the opposite strand 345/353
(97 %)
0 diff
(100 %id)
H96262 pineal gland .c 1542 to 1878 356 to 16     Submitted on the opposite strand 341/496
(68 %)
4 diff
(99.2 %id)
AA485167 germinal center B cell .c 1557 to 1891 349 to 15     Submitted on the opposite strand 335/349
(95 %)
0 diff
(100 %id)
BX473589   .c 1596 to 1936 1 to 341       341/341
(100 %)
1 diff
(99.8 %id)
AA410581 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1604 to 2040 438 to 1     Submitted on the opposite strand 438/438
(100 %)
4 diff
(99.1 %id)
BP320465 placenta .c 1631 to 2212 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP320534 placenta .c 1631 to 2228 1 to 598       598/598
(100 %)
0 diff
(100 %id)
BP359850 thalamus .c 1633 to 2214 1 to 582       582/582
(100 %)
0 diff
(100 %id)
AW368029 head_neck .c 1647 to 2118 1 to 472       472/472
(100 %)
8 diff
(98.4 %id)
EH326838   .c 1690 to 1781 1 to 90       90/92
(97 %)
3 diff
(96.8 %id)
BP315733 mammary gland .c 1776 to 2352 1 to 577       577/577
(100 %)
1 diff
(99.9 %id)
AA236691 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1808 to 2040 233 to 1     Submitted on the opposite strand 233/233
(100 %)
0 diff
(100 %id)
EC440437 Prostate .c 1817 to 1917 1 to 101       101/101
(100 %)
0 diff
(100 %id)
BP352956   .c 2029 to 2611 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
BF378810 uterus .c 2071 to 2311 241 to 1       241/241
(100 %)
2 diff
(99.2 %id)
BG747830 eye, normal pigmented retinal epithelium .c 2112 to 2872 1 to 760       760/776
(97 %)
17 diff
(97.9 %id)
BU171314 leiomyosarcoma, uterus .c 2114 to 2923 1 to 820       818/928
(88 %)
21 diff
(97.8 %id)
DA023754   .c 2129 to 2698 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
CN421026 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 2209 to 2771 1 to 563       563/563
(100 %)
4 diff
(99.3 %id)
DA440492 tongue, tumor tissue .c 2229 to 2822 2 to 595   tiling clone, capped   594/594
(100 %)
0 diff
(100 %id)
DA089142 cerebellum .c 2270 to 2824 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
W26370 eye, retina .c 2407 to 2569 81 to 243       163/275
(59 %)
4 diff
(98.6 %id)
BQ719274 sympathetic trunk .c 2576 to 3319 12 to 763       752/958
(78 %)
32 diff
(96.7 %id)
AA423943   .c 2674 to 3129 1 to 456   tiling clone,   456/456
(100 %)
0 diff
(100 %id)
BI031234 marrow .c 2700 to 3178 1 to 479       479/479
(100 %)
1 diff
(99.8 %id)
CN421033 embryonic stem cells, cell lines H1, H7, andH9 .c 2831 to 3536 1 to 707   tiling clone,   707/707
(100 %)
2 diff
(99.8 %id)
BG290778 bladder, transitional cell papilloma, cell line .c 2868 to 3526 1 to 668       668/1115
(59 %)
26 diff
(97.7 %id)
AW408748 lymph .c 2929 to 3103 8 to 182       175/182
(96 %)
0 diff
(100 %id)
TI_154148651   .c 2929 to 3439 83 to 594       512/514
(99 %)
8 diff
(98.5 %id)
BF083090 colon_est .c 2969 to 3326 361 to 4       358/376
(95 %)
0 diff
(100 %id)
AA182710   .c 3014 to 3371 1 to 365       365/373
(97 %)
17 diff
(95.5 %id)
CV421568 head_neck .c 3267 to 3485 220 to 3     Submitted on the opposite strand 218/220
(99 %)
0 diff
(100 %id)
AA532977 adrenal adenoma, adrenal gland .c 3395 to 3459 65 to 1   tiling clone,   65/65
(100 %)
0 diff
(100 %id)
DA040334 bladder .c 4009 to 4423 152 to 565   tiling clone, capped   564/564
(100 %)
1 diff
(99.9 %id)
BQ434137 embryonal carcinoma, cell line, testis .c 4218 to 5129 1 to 916   tiling clone,   916/916
(100 %)
24 diff
(97.4 %id)
DA832956 placenta .c 4221 to 4949 2 to 732   capped   731/780
(93 %)
11 diff
(98.6 %id)
AA397686.
matches multiple genes
  .c 4271 to 4677 1 to 406     also hits gene BTBD10 406/406
(100 %)
2 diff
(99.6 %id)
EH352627   .c 4418 to 4502 1 to 85       85/85
(100 %)
1 diff
(98.9 %id)
BG620525 placenta .c 4445 to 5209 1 to 764       764/785
(97 %)
15 diff
(98.1 %id)
BF216583 brain, glioblastoma .c 4450 to 5144 1 to 702       702/849
(82 %)
30 diff
(96.5 %id)
GD136070   .c 4497 to 4849 354 to 1     Submitted on the opposite strand 354/354
(100 %)
7 diff
(98.1 %id)
DB229648 trachea .c 4510 to 5079 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA220061 brain .c 4531 to 5103 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BE719138 head_neck .c 4587 to 4834 252 to 4       249/252
(98 %)
2 diff
(99.3 %id)
BF890996 marrow .c 4602 to 4860 23 to 282       260/282
(92 %)
7 diff
(97.6 %id)
BF891124 marrow .c 4602 to 4860 18 to 274       257/274
(93 %)
9 diff
(96.8 %id)
DA244984 brain .c 4668 to 5244 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
CD299094 Blood vessels - aorta, basilar and artery .c 4677 to 5332 1 to 664       664/752
(88 %)
30 diff
(96.1 %id)
BM725967 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 4694 to 4974 1 to 281   fully sequenced,   281/281
(100 %)
2 diff
(99.3 %id)
AA251813 germinal center B cell .c 4789 to 5154 1 to 365       365/365
(100 %)
5 diff
(98.7 %id)
DA324996 hippocampus .c 4791 to 5336 2 to 551   capped   550/550
(100 %)
4 diff
(99.3 %id)
BF540732 hypernephroma, Kidney .c 4793 to 5144 1 to 372       354/385
(91 %)
33 diff
(91.5 %id)
CB158162 Liver .c 4810 to 5391 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BM919070 pooled pancreas and spleen .c 4815 to 5769 18 to 977   tiling clone,   960/1094
(87 %)
34 diff
(96.9 %id)
DB292031 uterus .c 4832 to 5402 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
BP232578 muscle .c 4856 to 5435 1 to 581       581/583
(99 %)
4 diff
(99.4 %id)
BM680977 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 4914 to 5365 463 to 12   fully sequenced,   452/463
(97 %)
0 diff
(100 %id)
BF218516 brain, glioblastoma .c 4917 to 5652 1 to 725       725/743
(97 %)
32 diff
(95.7 %id)
CN421027 embryonic stem cells, DMSO-treated H9 cellline .c 4962 to 5524 6 to 568       563/568
(99 %)
7 diff
(98.8 %id)
AA582309 Kidney, kidney tumor .c 4986 to 5341 356 to 1       356/356
(100 %)
0 diff
(100 %id)
AL042530 testis .c 5001 to 5638 1 to 638       638/651
(98 %)
3 diff
(99.6 %id)
BQ417385 Pancreas, Purified pancreatic islet .c 5007 to 5403 1 to 397   fully sequenced,   397/397
(100 %)
2 diff
(99.5 %id)
TI_149307458   .c 5068 to 5927 955 to 99   AAA   857/959
(89 %)
22 diff
(97.8 %id)
AI768889 Kidney .c 5074 to 5215 144 to 2       143/144
(99 %)
0 diff
(100 %id)
AI871546 carcinoid, lung .c 5100 to 5361 262 to 1       262/262
(100 %)
0 diff
(100 %id)
BF754842 colon .c 5115 to 5312 222 to 24     Submitted on the opposite strand 199/222
(89 %)
0 diff
(100 %id)
BF910875 uterus_tumor .c 5123 to 5530 27 to 434       408/434
(94 %)
6 diff
(98.7 %id)
AW852260 colon .c 5138 to 5572 1 to 436       436/436
(100 %)
6 diff
(98.7 %id)
TI_154115881   .c 5140 to 5925 868 to 89   AAA   780/781
(99 %)
11 diff
(98.6 %id)
TI_154101283   .c 5143 to 5927 841 to 62   AAA   780/797
(97 %)
14 diff
(98.3 %id)
BP264262 small intestine .c 5177 to 5758 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BQ182155 Knee, Osteoarthritic Cartilage .c 5193 to 5922 749 to 19   AAA   731/731
(100 %)
1 diff
(99.9 %id)
DB215306 trachea .c 5210 to 5716 2 to 509   capped   508/508
(100 %)
1 diff
(99.9 %id)
R81770 placenta .c 5212 to 5553 1 to 357       357/400
(89 %)
24 diff
(94.0 %id)
CB243468 Human Lung Epithelial cells, lung .c 5213 to 5927 730 to 17   AAA   714/714
(100 %)
1 diff
(99.9 %id)
CA441784 Chondrosarcoma, Left Pubic Bone .c 5213 to 5927 732 to 17   AAA   716/716
(100 %)
1 diff
(99.9 %id)
AI702708 carcinoid, lung .c 5217 to 5673 1 to 455     Submitted on the opposite strand 455/455
(100 %)
3 diff
(99.4 %id)
AA987446 carcinoid, lung .c 5218 to 5577 1 to 360     Submitted on the opposite strand 360/360
(100 %)
0 diff
(100 %id)
AI299697 carcinoid, lung .c 5218 to 5689 1 to 472     Submitted on the opposite strand 472/472
(100 %)
0 diff
(100 %id)
AI693106 carcinoid, lung .c 5218 to 5633 1 to 416     Submitted on the opposite strand 416/416
(100 %)
1 diff
(99.8 %id)
BM979239 lung, Primary Lung Epithelial Cells .c 5230 to 5927 716 to 19   AAA   698/698
(100 %)
2 diff
(99.8 %id)
AW889017 nervous_tumor .c 5233 to 5585 1 to 352       352/352
(100 %)
4 diff
(98.9 %id)
BM760528 lymph node, stomach .c 5260 to 5691 1 to 432       432/432
(100 %)
0 diff
(100 %id)
BF365367 nervous_tumor .c 5261 to 5615 359 to 5       355/359
(98 %)
0 diff
(100 %id)
AA442537   .c 5279 to 5553 1 to 275       275/275
(100 %)
1 diff
(99.7 %id)
DA400574 thalamus .c 5287 to 5836 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
CR993684 T-Lymphocytes .c 5292 to 5921 1 to 630       630/630
(100 %)
0 diff
(100 %id)
BQ014117 Chondrosarcoma, Left Pubic Bone .c 5323 to 5927 622 to 17   AAA   606/606
(100 %)
2 diff
(99.7 %id)
CF135637 lymph .c 5330 to 5739 1 to 410       410/410
(100 %)
11 diff
(97.4 %id)
TI_154164106   .c 5336 to 5820 52 to 536       485/947
(51 %)
6 diff
(99.4 %id)
BF758908 colon .c 5345 to 5881 540 to 7     Submitted on the opposite strand 534/540
(98 %)
0 diff
(100 %id)
DB379430 placenta .c 5349 to 5927 566 to 1       566/584
(96 %)
30 diff
(94.9 %id)
TI_159721363   .c 5349 to 5926 709 to 136   AAA   574/977
(58 %)
29 diff
(97.1 %id)
CA449518 Chondrosarcoma, Left Pelvis .c 5362 to 5925 579 to 16   AAA   564/564
(100 %)
0 diff
(100 %id)
BQ287929 Pancreas, Purified pancreatic islet .c 5373 to 5933 561 to 1   fully sequenced,   561/561
(100 %)
4 diff
(99.3 %id)
BM083476 leiomyosarcoma, soft tissue .c 5392 to 5877 1 to 486     Submitted on the opposite strand 486/495
(98 %)
1 diff
(99.8 %id)
CB139662 Liver .c 5392 to 5897 1 to 506       506/506
(100 %)
0 diff
(100 %id)
AI922509 Kidney .c 5407 to 5926 523 to 4       520/523
(99 %)
0 diff
(100 %id)
AI653242 pooled germ cell tumors .c 5433 to 5927 508 to 14   AAA   495/495
(100 %)
0 diff
(100 %id)
AW237517 Kidney .c 5436 to 5921 490 to 5       486/490
(99 %)
0 diff
(100 %id)
AW418517 serous papillary carcinoma, high grade, 2pooled tumors, uterus .c 5441 to 5928 495 to 8   tiling clone,   488/495
(98 %)
0 diff
(100 %id)
BQ024159 placenta .c 5446 to 5925 495 to 16   AAA   480/480
(100 %)
0 diff
(100 %id)
AA806072 germinal center B cell .c 5450 to 5927 492 to 15   AAA   478/478
(100 %)
0 diff
(100 %id)
FN148612 breast carcinoma .c 5452 to 5548 97 to 1     Submitted on the opposite strand 97/97
(100 %)
2 diff
(98.0 %id)
CN421025 embryonic stem cells, DMSO-treated H9 cellline .c 5480 to 5920 441 to 1     Submitted on the opposite strand 441/441
(100 %)
3 diff
(99.4 %id)
BE856457 Prostate .c 5481 to 5927 447 to 1       447/447
(100 %)
5 diff
(98.9 %id)
AI968500 pooled germ cell tumors .c 5484 to 5927 444 to 1       444/444
(100 %)
0 diff
(100 %id)
AI760938 2 pooled tumors (clear cell type), Kidney .c 5488 to 5928 445 to 5       441/445
(99 %)
0 diff
(100 %id)
AI537876 serous papillary carcinoma, high grade, 2pooled tumors, uterus .c 5489 to 5925 437 to 1       437/437
(100 %)
0 diff
(100 %id)
AI811401 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .c 5490 to 5928 441 to 2       440/441
(99 %)
0 diff
(100 %id)
AW244033 connective tissue, five pooled sarcomas, including myxoidliposarcoma, solitary fibrous tumor, malignant fibroushistiocytoma, gastrointestinal stromal tumor, andmesothelioma .c 5504 to 5927 424 to 1       424/424
(100 %)
11 diff
(97.5 %id)
AL046630 testis .c 5507 to 6224 1 to 717       717/718
(99 %)
4 diff
(99.5 %id)
AI143522 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 5508 to 5925 417 to 1       417/417
(100 %)
1 diff
(99.8 %id)
BF198103 skin, normal, 4 pooled samples .c 5523 to 5925 403 to 1       403/403
(100 %)
2 diff
(99.6 %id)
AW263905 connective tissue, five pooled sarcomas, including myxoidliposarcoma, solitary fibrous tumor, malignant fibroushistiocytoma, gastrointestinal stromal tumor, andmesothelioma .c 5525 to 5927 403 to 1       403/406
(99 %)
0 diff
(100 %id)
AI985159 Kidney .c 5530 to 5924 396 to 1       396/396
(100 %)
1 diff
(99.8 %id)
FN141517 breast carcinoma .c 5534 to 5628 99 to 1     Submitted on the opposite strand 99/99
(100 %)
4 diff
(96.0 %id)
DA518960 brain .c 5536 to 5915 2 to 381   capped   380/380
(100 %)
0 diff
(100 %id)
AI962850 pooled germ cell tumors .c 5543 to 5927 407 to 23   AAA   385/385
(100 %)
1 diff
(99.8 %id)
AI202886 pooled germ cell tumors .c 5544 to 5927 383 to 1       383/383
(100 %)
1 diff
(99.8 %id)
AW300419 Kidney .c 5549 to 5929 381 to 1       381/381
(100 %)
0 diff
(100 %id)
AA251838 germinal center B cell .c 5560 to 5927 368 to 1       368/368
(100 %)
0 diff
(100 %id)
AA861778   .c 5562 to 5928 372 to 5       368/372
(98 %)
0 diff
(100 %id)
DB090184 testis .c 5567 to 6105 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
EC507185 Prostate .c 5569 to 5665 1 to 93       93/93
(100 %)
4 diff
(95.7 %id)
EC550703 Prostate .c 5569 to 5665 1 to 95       95/95
(100 %)
2 diff
(97.9 %id)
AI025639 parathyroid gland, parathyroid tumor .c 5576 to 5915 339 to 1       339/340
(99 %)
2 diff
(99.5 %id)
AA399033.
matches multiple genes
  .c 5579 to 5924 352 to 7     also hits gene C10orf25 346/352
(98 %)
0 diff
(100 %id)
AA772551 parathyroid gland, parathyroid tumor .c 5587 to 5928 349 to 8       342/455
(75 %)
0 diff
(100 %id)
AI924740 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .c 5590 to 5928 339 to 1       339/339
(100 %)
1 diff
(99.8 %id)
AI800259 Kidney .c 5592 to 5927 336 to 1       336/336
(100 %)
2 diff
(99.5 %id)
AA179395   .c 5593 to 5924 334 to 2       333/334
(99 %)
0 diff
(100 %id)
DB159885 thymus .c 5595 to 6084 2 to 492   capped   491/491
(100 %)
1 diff
(99.8 %id)
AA610064   .c 5605 to 5928 327 to 4       324/327
(99 %)
0 diff
(100 %id)
AI865176 lymph node, lymphoma, follicular mixed small and largecell .c 5615 to 5928 314 to 1       314/317
(99 %)
7 diff
(97.8 %id)
FN051564 breast carcinoma .c 5619 to 5725 109 to 1     Submitted on the opposite strand 109/109
(100 %)
2 diff
(98.2 %id)
FN112965 breast carcinoma .c 5640 to 5746 107 to 4     Submitted on the opposite strand 104/107
(97 %)
0 diff
(100 %id)
AI289921 Kidney, renal cell tumor .c 5646 to 5926 281 to 1       281/281
(100 %)
0 diff
(100 %id)
AA565722 adrenal adenoma, adrenal gland .c 5649 to 5927 279 to 1       279/279
(100 %)
1 diff
(99.7 %id)
AW770029 lymph node, lymphoma, follicular mixed small and largecell .c 5695 to 5925 250 to 20   AAA   231/231
(100 %)
3 diff
(98.8 %id)
AI025969 parathyroid gland, parathyroid tumor .c 5696 to 5926 237 to 7       231/237
(97 %)
0 diff
(100 %id)
AW439544 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .c 5696 to 5928 235 to 3       233/235
(99 %)
0 diff
(100 %id)
AA757299   .c 5743 to 5922 180 to 1       180/180
(100 %)
1 diff
(99.5 %id)
BU963260 mixed (pool of 40 RNAs) .c 5801 to 5922 1 to 122   AAA   122/122
(100 %)
2 diff
(98.4 %id)
DB143250 thymus .c 5851 to 6383 2 to 534   tiling clone, capped   533/533
(100 %)
0 diff
(100 %id)
DA276622 corpus callosum .c 5943 to 6512 2 to 575   capped   574/574
(100 %)
3 diff
(99.5 %id)
DA135430 alzheimer cortex .c 5950 to 6577 2 to 632   capped   631/631
(100 %)
3 diff
(99.6 %id)
BF982160 duodenal adenocarcinoma, cell line, small intestine .c 6002 to 6739 14 to 769       756/1101
(68 %)
6 diff
(99.5 %id)
AW380171 head_neck .c 6031 to 6359 1 to 329       329/338
(97 %)
17 diff
(95.0 %id)
DA289323 hippocampus .c 6074 to 6645 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA594978 lung .c 6078 to 6651 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
AW080913 colon, moderately differentiated adenocarcinoma .c 6079 to 6477 24 to 421     Submitted on the opposite strand 398/421
(94 %)
6 diff
(98.6 %id)
BE896027 melanotic melanoma, skin .c 6121 to 6706 1 to 590       590/900
(65 %)
16 diff
(98.3 %id)
AL600780   .c 6139 to 6758 1 to 620   tiling clone,   620/620
(100 %)
2 diff
(99.7 %id)
FN075911 breast carcinoma .c 6163 to 6233 71 to 1     Submitted on the opposite strand 71/72
(98 %)
0 diff
(100 %id)
DA310407 hippocampus .c 6172 to 6748 2 to 579   capped   578/578
(100 %)
3 diff
(99.5 %id)
DB258263 uterus .c 6191 to 6756 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
BU596998 mixed (pool of 40 RNAs) .c 6195 to 6975 1 to 782       782/784
(99 %)
16 diff
(98.0 %id)
BP228601 brain .c 6214 to 6796 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
AW749363 breast .c 6289 to 6880 589 to 4       586/590
(99 %)
0 diff
(100 %id)
DA140619 alzheimer cortex .c 6325 to 6868 2 to 545   capped   544/544
(100 %)
2 diff
(99.7 %id)
BP236000 coronary artery .c 6327 to 6908 1 to 584       584/584
(100 %)
5 diff
(99.2 %id)
EH336978   .c 6336 to 6437 1 to 101       101/102
(99 %)
2 diff
(98.1 %id)
AA496833   .c 6467 to 6937 1 to 471       471/471
(100 %)
1 diff
(99.8 %id)
DA832729 placenta .c 6539 to 7288 2 to 758   capped   757/817
(92 %)
20 diff
(97.6 %id)
BQ917517 sciatic nerve .c 6540 to 7392 18 to 883       866/901
(96 %)
6 diff
(99.4 %id)
BQ776906 Pancreas, Purified pancreatic islet .c 6576 to 7183 11 to 618   tiling clone,   608/618
(98 %)
6 diff
(99.1 %id)
BP291221 lung .c 6606 to 6968 1 to 362       362/583
(62 %)
3 diff
(99.5 %id)
DA528183 brain .c 6643 to 7251 2 to 611   capped   610/610
(100 %)
1 diff
(99.9 %id)
R58228   .c 6713 to 6949 1 to 236       236/236
(100 %)
5 diff
(97.9 %id)
BG165104 hypernephroma, cell line, Kidney .c 6728 to 7306 1 to 575       575/873
(65 %)
22 diff
(97.5 %id)
BQ777404 Pancreas, Purified pancreatic islet .c 6747 to 6888 19 to 160       142/160
(88 %)
6 diff
(96.3 %id)
H09840 whole brain .c 6899 to 7339 1 to 449       449/449
(100 %)
11 diff
(97.6 %id)
DA820506 pericardium .c 6905 to 7388 2 to 488   capped   487/487
(100 %)
1 diff
(99.8 %id)
BM720683 eye, fetal eye .c 6950 to 7603 37 to 690   tiling clone,   654/690
(94 %)
6 diff
(99.2 %id)
AA836330 germinal center B cell .c 6952 to 7180 1 to 229       229/229
(100 %)
0 diff
(100 %id)
FN106233 breast carcinoma .c 7069 to 7141 1 to 70       70/70
(100 %)
3 diff
(95.8 %id)
Z43462 brain, total brain .c 7154 to 7478 1 to 325       325/328
(99 %)
1 diff
(99.7 %id)
F08407 brain, total brain .c 7168 to 7444 1 to 277       277/277
(100 %)
0 diff
(100 %id)
DB044998 testis .c 7170 to 7742 2 to 575   tiling clone, capped   574/574
(100 %)
1 diff
(99.9 %id)
CN421031 embryonic stem cells, DMSO-treated H9 cellline .c 7263 to 7590 1 to 328       328/328
(100 %)
0 diff
(100 %id)
FN169407 breast carcinoma .c 7283 to 7386 1 to 108       108/113
(95 %)
7 diff
(93.9 %id)
AA094631   .c 7438 to 7605 1 to 167       167/168
(99 %)
6 diff
(96.5 %id)
H47178 liver and spleen .c 7448 to 7885 1 to 449       449/449
(100 %)
15 diff
(96.7 %id)
N76525 liver and spleen .c 7455 to 7811 1 to 358       358/362
(98 %)
3 diff
(99.2 %id)
CN421028 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 7528 to 8184 1 to 679       679/679
(100 %)
8 diff
(98.9 %id)
BG532831 embryonal carcinoma, testis .c 7562 to 8301 1 to 756       756/760
(99 %)
40 diff
(94.8 %id)
AI114660 Liver .c 7593 to 8300 1 to 710   tiling clone,   710/710
(100 %)
19 diff
(97.4 %id)
CA391490 eye, RPE/choroid .c 7617 to 8085 1 to 469       469/469
(100 %)
2 diff
(99.6 %id)
BP389875 pancreatic islet .c 7622 to 8027 410 to 1       410/410
(100 %)
2 diff
(99.6 %id)
AI061591 Liver .c 7803 to 8387 1 to 586       586/586
(100 %)
1 diff
(99.9 %id)
N48131 liver and spleen .c 7804 to 8194 11 to 403   fully sequenced,   393/403
(97 %)
3 diff
(99.3 %id)
N48117 liver and spleen .c 7807 to 8224 1 to 431       431/431
(100 %)
59 diff
(86.4 %id)
AW384456 head_neck .c 7881 to 8144 1 to 263       263/263
(100 %)
1 diff
(99.7 %id)
BE167338 head_neck .c 7881 to 8224 1 to 345       345/353
(97 %)
4 diff
(98.9 %id)
TI_57238287   .c 7884 to 8511 26 to 652       627/654
(95 %)
4 diff
(99.4 %id)
BI912802 brain .c 7885 to 8511 1 to 626       626/628
(99 %)
4 diff
(99.4 %id)
T19719   .c 7901 to 8128 1 to 228       228/232
(98 %)
3 diff
(98.8 %id)
TI_154035352   .c 7914 to 8654 821 to 88   AAA   734/896
(81 %)
13 diff
(98.6 %id)
CN421032 embryonic stem cells, cell lines H1, H7, andH9 .c 7918 to 8167 1 to 250       250/250
(100 %)
0 diff
(100 %id)
R23036 placenta .c 7934 to 8227 1 to 306       306/308
(99 %)
17 diff
(94.5 %id)
BE075101 breast .c 7937 to 8427 1 to 485       485/485
(100 %)
14 diff
(97.2 %id)
CA443932 Fibrosarcoma .c 7965 to 8654 707 to 19   AAA   689/689
(100 %)
3 diff
(99.6 %id)
BF908708 uterus_tumor .c 7971 to 8282 19 to 331       313/331
(94 %)
6 diff
(98.2 %id)
BF912395 uterus_tumor .c 7971 to 8356 397 to 11     Submitted on the opposite strand 387/405
(95 %)
0 diff
(100 %id)
BF912491 uterus_tumor .c 7971 to 8356 397 to 11     Submitted on the opposite strand 387/405
(95 %)
0 diff
(100 %id)
AA136180.
matches multiple genes
uterus .c 7979 to 8416 1 to 438     also hits gene MMP24 438/438
(100 %)
1 diff
(99.8 %id)
BP231589 muscle .c 7985 to 8445 1 to 483       483/583
(82 %)
19 diff
(96.8 %id)
AW384458 head_neck .c 7995 to 8212 17 to 234       218/244
(89 %)
1 diff
(99.6 %id)
BM995103 Chondrosarcoma, Left Pubic Bone .c 7997 to 8654 677 to 19   AAA   659/659
(100 %)
5 diff
(99.3 %id)
BQ574263 Chondrosarcoma Grade II, Left Pelvis .c 8004 to 8654 670 to 19   AAA   652/664
(98 %)
2 diff
(99.7 %id)
DB379059 placenta .c 8079 to 8654 574 to 1   tiling clone,   574/592
(96 %)
20 diff
(96.7 %id)
BQ776590 Pancreas, Purified pancreatic islet .c 8087 to 8655 572 to 3       570/572
(99 %)
0 diff
(100 %id)
AA496875   .c 8156 to 8655 503 to 4       500/503
(99 %)
0 diff
(100 %id)
N38985 liver and spleen .c 8164 to 8654 502 to 1   fully sequenced,   502/502
(100 %)
11 diff
(97.9 %id)
BM679384 eye, fetal eye .c 8184 to 8654 489 to 19   AAA   471/471
(100 %)
1 diff
(99.8 %id)
H09755 whole brain .c 8280 to 8655 398 to 20   tiling clone, AAA   379/411
(92 %)
7 diff
(98.3 %id)
N38971 liver and spleen .c 8295 to 8654 360 to 1       360/360
(100 %)
1 diff
(99.8 %id)
BE910012 epithelioid carcinoma, Pancreas .c 8318 to 8507 616 to 813       793/858
(92 %)
74 diff
(91.4 %id)
R22931 placenta .c 8371 to 8655 290 to 1       290/348
(83 %)
7 diff
(98.0 %id)
Z39538 brain, total brain .c 8388 to 8654 267 to 1       267/267
(100 %)
0 diff
(100 %id)
F04624 brain, total brain .c 8415 to 8654 240 to 1       240/240
(100 %)
0 diff
(100 %id)
H47088 liver and spleen .c 8421 to 8607 186 to 1       186/186
(100 %)
12 diff
(93.6 %id)
AF180425 brain .d 1 to 7119 1 to 7117 T609R N692S E698G tiling clone,   7117/7125
(99 %)
17 diff
(99.8 %id)
DR006109 Prostate .d 176 to 736 1 to 560       560/560
(100 %)
3 diff
(99.5 %id)
BC029354 placenta .d 286 to 1535 1 to 1250   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 1250/1280
(97 %)
2 diff
(99.9 %id)
BG434603 placenta .d 286 to 995 1 to 709   available from MGC,   709/713
(99 %)
10 diff
(98.6 %id)
NM_015224.3   .d 286 to 7532 1 to 7247 exact RefSeq,   7247/7247
(100 %)
0 diff
(100 %id)
AK307599 brain .d 824 to 4237 1 to 3414   tiling clone,   3414/3414
(100 %)
5 diff
(99.9 %id)
BU196213 large cell carcinoma, lung .d 2390 to 3182 1 to 803   tiling clone,   803/939
(85 %)
18 diff
(98.1 %id)
CV569261 cornea, eye .d 2412 to 3018 1 to 607       607/607
(100 %)
1 diff
(99.9 %id)
BU198102   .d 2430 to 3056 1 to 624       624/624
(100 %)
25 diff
(96.0 %id)
AL710082 human skeletal muscle .d 2522 to 2911 1 to 390       390/390
(100 %)
5 diff
(98.8 %id)
BM728806 eye, fetal eye .d 3483 to 4090 1 to 607   fully sequenced,   607/607
(100 %)
1 diff
(99.9 %id)
BU742722 eye, fetal eye .d 4060 to 4802 760 to 16   fully sequenced, AAA   745/745
(100 %)
2 diff
(99.8 %id)
AB029028 brain .e 1 to 5093 7 to 5100 T104R tiling clone, available from KIAA,   5100/5100
(100 %)
5 diff
(100.0 %id)
DA861147 placenta .e 4472 to 5049 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
BF909523 uterus_tumor .e 4480 to 4835 387 to 33     Submitted on the opposite strand 355/387
(91 %)
0 diff
(100 %id)
AA075597   .e 4492 to 5075 1 to 582   fully sequenced, AAA   582/582
(100 %)
29 diff
(95.1 %id)
BM990800 lung, Lung Focal Fibrosis .e 4517 to 5093 595 to 19   AAA   577/577
(100 %)
1 diff
(99.9 %id)
T19720   .e 4521 to 4727 206 to 1       206/213
(96 %)
8 diff
(96.3 %id)
FN099640 breast carcinoma .e 4523 to 4614 1 to 93       93/99
(93 %)
6 diff
(94.0 %id)
BG110380 Bone, osteosarcoma, cell line .e 4537 to 5093 1 to 555   AAA   555/555
(100 %)
3 diff
(99.5 %id)
AI671613 pooled germ cell tumors .e 4555 to 5093 553 to 15   AAA   539/539
(100 %)
2 diff
(99.7 %id)
BE550608 pooled germ cell tumors .e 4575 to 5093 536 to 18   AAA   519/519
(100 %)
1 diff
(99.9 %id)
AA778899 liver and spleen .e 4576 to 5090 515 to 1       515/515
(100 %)
1 diff
(99.9 %id)
AW842474 colon_normal .e 4577 to 4813 240 to 2       239/244
(97 %)
0 diff
(100 %id)
AA279243 germinal center B cell .e 4579 to 4783 1 to 205   fully sequenced,   205/205
(100 %)
1 diff
(99.6 %id)
AA279928 germinal center B cell .e 4579 to 4745 1 to 167   fully sequenced,   167/167
(100 %)
1 diff
(99.5 %id)
BQ001296 lung, Metastatic Chondrosarcoma .e 4598 to 5093 515 to 19   AAA   497/502
(99 %)
3 diff
(99.5 %id)
AI888310 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .e 4606 to 5097 493 to 2       492/493
(99 %)
0 diff
(100 %id)
AI088077 parathyroid gland, parathyroid tumor .e 4608 to 5097 492 to 3       490/492
(99 %)
0 diff
(100 %id)
AI493142 Kidney .e 4642 to 5094 456 to 4   tiling clone,   453/456
(99 %)
0 diff
(100 %id)
AI338275 lung .e 4648 to 5094 450 to 4       447/450
(99 %)
0 diff
(100 %id)
AW872997 adrenal gland, neuroblastoma .e 4650 to 5094 448 to 4       445/448
(99 %)
0 diff
(100 %id)
AI459760 brain, meningioma .e 4661 to 5097 438 to 2       437/438
(99 %)
0 diff
(100 %id)
BE645791 Prostate .e 4671 to 5093 423 to 1       423/423
(100 %)
0 diff
(100 %id)
AA909786 pooled germ cell tumors .e 4673 to 5093 421 to 1       421/421
(100 %)
1 diff
(99.8 %id)
AI292044 placenta .e 4682 to 5094 416 to 4       413/416
(99 %)
0 diff
(100 %id)
AA136299.
matches multiple genes
uterus .e 4692 to 5093 406 to 1     also hits gene gawsly 406/410
(99 %)
4 diff
(99.1 %id)
AA075344   .e 4707 to 5094 391 to 1   fully sequenced,   391/391
(100 %)
1 diff
(99.8 %id)
AI871819 ovary, tumor, 5 pooled (see description) .e 4709 to 5094 386 to 1       386/386
(100 %)
0 diff
(100 %id)
AA279929 germinal center B cell .e 4715 to 5093 379 to 1   fully sequenced,   379/379
(100 %)
1 diff
(99.8 %id)
BM128498 Islets of Langerhans, Pancreas .e 4717 to 5093 392 to 15   AAA   378/378
(100 %)
1 diff
(99.8 %id)
AI924804 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .e 4725 to 5092 369 to 1       369/369
(100 %)
3 diff
(99.2 %id)
AI000293 pooled germ cell tumors .e 4735 to 5093 359 to 1       359/359
(100 %)
1 diff
(99.8 %id)
BU537343 mixed (pool of 40 RNAs) .e 4736 to 5095 1 to 359       359/393
(91 %)
3 diff
(99.3 %id)
AA952968 pooled .e 4745 to 5094 351 to 2       350/351
(99 %)
0 diff
(100 %id)
AW022179 cochlea, ear .e 4745 to 5093 1 to 349   AAA   349/349
(100 %)
4 diff
(98.9 %id)
AA279124 germinal center B cell .e 4753 to 5093 341 to 1   fully sequenced,   341/341
(100 %)
1 diff
(99.8 %id)
AI244527 Kidney .e 4761 to 5097 339 to 3       337/339
(99 %)
0 diff
(100 %id)
CN289209 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 4766 to 5093 10 to 337   AAA   328/337
(97 %)
6 diff
(98.3 %id)
AI003708 pineal gland .e 4784 to 5097 319 to 6       314/319
(98 %)
0 diff
(100 %id)
AI933835 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .e 4987 to 5093 136 to 29   AAA   108/108
(100 %)
2 diff
(98.2 %id)
DA151852 amygdala .f-u 1 to 577 2 to 578   tiling clone, capped   577/577
(100 %)
2 diff
(99.7 %id)
AW604392 colon .f-u 117 to 813 1 to 692       692/701
(98 %)
25 diff
(96.5 %id)
BP344159 synovial membrane .f-u 152 to 733 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BE176893 head_neck .f-u 191 to 616 434 to 5     Submitted on the opposite strand 430/436
(98 %)
0 diff
(100 %id)
BX496771 Liver .f-u 197 to 688 1 to 491       491/491
(100 %)
7 diff
(98.6 %id)
BP291154 lung .f-u 273 to 748 1 to 478       478/581
(82 %)
30 diff
(94.9 %id)
AL589492 human spinal cord .f-u 284 to 646 55 to 417   tiling clone,   363/417
(87 %)
6 diff
(98.6 %id)
BU619768 Cell Line, Chondrosarcoma .f-u 302 to 985 694 to 11   tiling clone, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 684/694
(98 %)
0 diff
(100 %id)
AI479100 B-cell, chronic lymphotic leukemia .g 1 to 470 1 to 470 G141X tiling clone, Submitted on the opposite strand 470/470
(100 %)
0 diff
(100 %id)
BX490770   .h 1 to 617 33 to 648   tiling clone,   616/648
(95 %)
9 diff
(98.7 %id)
DA301575 hippocampus .h 528 to 1078 2 to 553   tiling clone, capped   552/552
(100 %)
3 diff
(99.5 %id)
CF134990 CNCAP(3)T-225 cell line, Prostate .h 661 to 1129 1 to 469   tiling clone,   469/469
(100 %)
5 diff
(99.0 %id)
AK123777   .h 891 to 2298 1 to 1408   tiling clone, available from FLJ,   1408/1408
(100 %)
2 diff
(99.9 %id)
DA618930   .h 892 to 1486 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
AL691568   .h 1013 to 1638 1 to 626       626/626
(100 %)
3 diff
(99.6 %id)
BM541740 leiomyosarcoma, uterus .h 1130 to 2077 37 to 994   tiling clone,   958/1047
(91 %)
31 diff
(97.1 %id)
AI375867 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .h 1268 to 1739 473 to 2   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 472/473
(99 %)
0 diff
(100 %id)
DB240734 trachea .h 1273 to 1866 2 to 596   capped   595/595
(100 %)
2 diff
(99.7 %id)
DB065478 testis .h 1289 to 1809 2 to 522   capped   521/521
(100 %)
0 diff
(100 %id)
DB320177   .h 1793 to 2298 506 to 1       506/530
(95 %)
2 diff
(99.7 %id)
AL691569   .h 4299 to 5025 761 to 36   tiling clone, AAA   726/726
(100 %)
2 diff
(99.8 %id)
DA111835 cerebellum .i 1 to 589 2 to 590 exact tiling clone, capped   589/589
(100 %)
1 diff
(99.9 %id)
BU568663 testis .j 1 to 691 1 to 698 exact tiling clone,   698/801
(87 %)
15 diff
(98.2 %id)
AI762178 B-cell, chronic lymphotic leukemia .k 1 to 502 1 to 503 F82I L83S M84D V85G D86* tiling clone, Submitted on the opposite strand 503/503
(100 %)
2 diff
(99.7 %id)
DB047870 testis .l-u 1 to 549 2 to 552   tiling clone, capped   551/551
(100 %)
2 diff
(99.7 %id)
DA269285 caudate nucleus .l-u 25 to 573 2 to 550   tiling clone, capped   549/549
(100 %)
1 diff
(99.9 %id)
DA804146 brain .l-u 32 to 573 2 to 546   capped   545/545
(100 %)
4 diff
(99.3 %id)
DA433781 tongue, tumor tissue .l-u 45 to 580 2 to 537   capped   536/536
(100 %)
3 diff
(99.5 %id)
TI_57200962   .l-u 50 to 515 67 to 532       466/790
(58 %)
7 diff
(99.2 %id)
BI824457 pooled brain, lung, testis .l-u 54 to 504 1 to 451       451/451
(100 %)
3 diff
(99.4 %id)
AW138700   .l-u 205 to 511 307 to 1       307/307
(100 %)
0 diff
(100 %id)
AA570147 colon .l-u 209 to 511 303 to 1       303/303
(100 %)
9 diff
(97.1 %id)
BG326781 Kidney, renal cell adenocarcinoma .l-u 218 to 579 1 to 362   AAA   362/362
(100 %)
0 diff
(100 %id)
AW051285 pooled .l-u 505 to 987 1 to 483     Submitted on the opposite strand 483/483
(100 %)
2 diff
(99.6 %id)
BU072481 Pancreas, Purified pancreatic islet .l-u 539 to 1130 1 to 592   tiling clone, Submitted on the opposite strand 592/592
(100 %)
0 diff
(100 %id)
BF115667 fibrotheoma, ovary .l-u 563 to 1037 1 to 475     Submitted on the opposite strand 475/475
(100 %)
0 diff
(100 %id)
BM703665 eye, human retina .l-u 688 to 1202 1 to 515   fully sequenced,   515/515
(100 %)
0 diff
(100 %id)
AA424287.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .l-u 706 to 906 8 to 207     also hits gene LOC100287549, ZNF84 200/207
(96 %)
6 diff
(97.2 %id)
BG115093 duodenal adenocarcinoma, cell line, small intestine .l-u 706 to 1371 724 to 65   tiling clone, Submitted on the opposite strand 660/959
(68 %)
0 diff
(100 %id)
CV403077 breast .l-u 724 to 993 274 to 2     Submitted on the opposite strand 273/277
(98 %)
0 diff
(100 %id)
AW138775   .l-u 734 to 1218 503 to 18   AAA   486/486
(100 %)
3 diff
(99.4 %id)
AA424485.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .l-u 804 to 1220 417 to 1     also hits gene CDC42BPA 417/417
(100 %)
0 diff
(100 %id)
BX113757   .l-u 890 to 1218 1 to 329   AAA   329/329
(100 %)
2 diff
(99.4 %id)
AI032305   .l-u 927 to 1221 295 to 1   tiling clone,   295/295
(100 %)
0 diff
(100 %id)
BU730097 eye, human retina .l-u 982 to 1218 259 to 23   fully sequenced,   237/259
(91 %)
0 diff
(100 %id)
AA994139 pooled .m 1 to 294 294 to 1 exact tiling clone,   294/298
(98 %)
0 diff
(100 %id)
BF824862 head_normal .n 1 to 441 1 to 443 N2S S6C S7F Y8L L9P ... tiling clone,   443/443
(100 %)
9 diff
(98.0 %id)
FN141188 breast carcinoma .o-u 1 to 107 1 to 108   tiling clone,   108/108
(100 %)
3 diff
(97.3 %id)
AW022821 cochlea, ear .o-u 18 to 500 507 to 25   tiling clone, Submitted on the opposite strand 483/507
(95 %)
0 diff
(100 %id)
AW188239 pooled .o-u 124 to 682 562 to 4       559/562
(99 %)
0 diff
(100 %id)
BM713286 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .o-u 196 to 675 1 to 480   fully sequenced,   480/480
(100 %)
0 diff
(100 %id)
AI741072 pooled .o-u 250 to 696 462 to 16   AAA   447/447
(100 %)
0 diff
(100 %id)
AA662251 alveolar rhabdomyosarcoma .o-u 302 to 691 391 to 2       390/391
(99 %)
9 diff
(97.7 %id)
AA861741   .o-u 346 to 577 237 to 6       232/237
(97 %)
0 diff
(100 %id)
BM676401 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .o-u 420 to 679 274 to 15   fully sequenced, AAA   260/260
(100 %)
0 diff
(100 %id)
AI632091 pooled germ cell tumors .o-u 462 to 814 353 to 1       353/353
(100 %)
3 diff
(99.2 %id)
AI634147 pooled germ cell tumors .o-u 470 to 814 345 to 1   tiling clone,   345/345
(100 %)
0 diff
(100 %id)
AA302966 Spleen .o-u 779 to 1185 409 to 1 exact tiling clone,   409/410
(99 %)
5 diff
(98.8 %id)
AL700943 human skeletal muscle .p-u 1 to 250 1 to 250   tiling clone,   250/250
(100 %)
5 diff
(98.0 %id)
TI_154163109   .p-u 250 to 890 80 to 723   tiling clone,   644/721
(89 %)
12 diff
(98.4 %id)
AL596903   .p-u 346 to 896 1 to 550   tiling clone,   550/550
(100 %)
1 diff
(99.9 %id)
BU507117 leiomyosarcoma, uterus .q 1 to 199 12 to 210 exact tiling clone,   841/956
(87 %)
25 diff
(97.4 %id)
BY995113   .r 1 to 681 1 to 681 exact tiling clone,   681/681
(100 %)
5 diff
(99.3 %id)
CX871766 embryonic stem .s-u 1 to 681 1 to 682 E33* tiling clone,   682/682
(100 %)
1 diff
(99.9 %id)
BX493826   .t-u 1 to 518 1 to 520 K66* tiling clone,   520/520
(100 %)
3 diff
(99.5 %id)
AA772056 parathyroid gland, parathyroid tumor .u 1 to 254 1 to 254 exact tiling clone, Submitted on the opposite strand 254/254
(100 %)
1 diff
(99.7 %id)
DA230639 brain Gene C3orf63, variant not shown       capped Suspected internal deletion, this clone was ignored    
CN421034 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells Gene C3orf63, variant not shown         This clone was ignored    
AW194966 Kidney Gene C3orf63, variant not shown         Submitted on the opposite strand    
BE968636 heart Gene C3orf63, variant not shown         Suspected internal deletion, this clone was ignored    
BE969064 heart Gene C3orf63, variant not shown         Suspected internal deletion, this clone was ignored    
DB084716 testis Gene C3orf63, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g, .h, .i, .j, .k, .l-u, .m, .n, .o-u, .p-u, .q, .r, .s-u, .t-u, .u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI