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Gene RANBP1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
438 supporting clones for gene RANBP1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB455245 testis .a 1 to 480 2 to 481       481/481
(100 %)
1 diff
(99.8 %id)
DC397929 testis .a 1 to 556 2 to 557   tiling clone,   557/557
(100 %)
0 diff
(100 %id)
BI826803 brain, medulla .a 52 to 743 1 to 692       692/692
(100 %)
2 diff
(99.8 %id)
TI_57174415   .a 55 to 743 68 to 756       689/756
(91 %)
8 diff
(99.0 %id)
CA489474   .a 310 to 1202 1 to 896       896/901
(99 %)
20 diff
(97.8 %id)
N72850 melanocyte .a 481 to 929 1 to 463     Submitted on the opposite strand 463/468
(98 %)
24 diff
(94.9 %id)
EL954361 eyeball .a 487 to 1054 20 to 586       567/586
(96 %)
6 diff
(99.0 %id)
BF818296 colon_ins .a 489 to 912 1 to 425       425/425
(100 %)
5 diff
(98.9 %id)
EL949398 eyeball .a 490 to 1038 7 to 555       549/555
(98 %)
6 diff
(99.0 %id)
AI290488 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 490 to 1101 9 to 628     Submitted on the opposite strand 620/629
(98 %)
16 diff
(97.5 %id)
AI300432 carcinoid, lung .a 490 to 960 1 to 471     Submitted on the opposite strand 471/471
(100 %)
2 diff
(99.6 %id)
BE537201 cervix .a 490 to 1045 558 to 11     Submitted on the opposite strand 548/810
(67 %)
4 diff
(99.6 %id)
N30906 placenta .a 491 to 1054 10 to 583     Submitted on the opposite strand 574/583
(98 %)
20 diff
(96.6 %id)
N34567 melanocyte .a 491 to 956 10 to 483     Submitted on the opposite strand 474/483
(98 %)
17 diff
(96.5 %id)
AA480048 ovarian tumor, ovary .a 491 to 1032 10 to 549     Submitted on the opposite strand 540/553
(97 %)
18 diff
(96.8 %id)
AI097592 brain, glioblastoma (pooled) .a 499 to 965 1 to 466     Submitted on the opposite strand 466/466
(100 %)
2 diff
(99.6 %id)
AI160997 heart .a 499 to 971 1 to 473     Submitted on the opposite strand 473/474
(99 %)
1 diff
(99.8 %id)
AI221143 pooled .a 499 to 952 1 to 454     Submitted on the opposite strand 454/454
(100 %)
1 diff
(99.8 %id)
AI278391 placenta .a 499 to 980 1 to 482     Submitted on the opposite strand 482/482
(100 %)
1 diff
(99.8 %id)
AI343017 carcinoid, lung .a 499 to 956 1 to 458     Submitted on the opposite strand 458/458
(100 %)
1 diff
(99.8 %id)
AI304580 adenocarcinoma, colon .a 499 to 937 1 to 440     Submitted on the opposite strand 440/440
(100 %)
5 diff
(98.9 %id)
AI419130 brain, glioblastoma (pooled) .a 499 to 914 1 to 418     Submitted on the opposite strand 418/426
(98 %)
6 diff
(98.6 %id)
CN349825 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 504 to 1083 9 to 588   tiling clone,   580/588
(98 %)
6 diff
(99.0 %id)
AW079440 colon, moderately differentiated adenocarcinoma .a 507 to 844 1 to 336     Submitted on the opposite strand 336/336
(100 %)
2 diff
(99.5 %id)
AI279347 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 515 to 1085 1 to 571     Submitted on the opposite strand 571/571
(100 %)
10 diff
(98.3 %id)
AI368054   .a 515 to 982 1 to 468     Submitted on the opposite strand 468/468
(100 %)
0 diff
(100 %id)
AI368053   .a 517 to 919 1 to 404     Submitted on the opposite strand 404/449
(89 %)
19 diff
(95.8 %id)
AW131530 brain, medulloblastoma .a 518 to 979 1 to 462     Submitted on the opposite strand 462/462
(100 %)
3 diff
(99.4 %id)
AI279787 carcinoid, lung .a 519 to 978 1 to 460     Submitted on the opposite strand 460/460
(100 %)
2 diff
(99.6 %id)
AI333227 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 519 to 1015 1 to 497     Submitted on the opposite strand 497/497
(100 %)
1 diff
(99.8 %id)
AI799973 Prostate .a 520 to 1010 1 to 491     Submitted on the opposite strand 491/491
(100 %)
2 diff
(99.6 %id)
BE348381 carcinoid, lung .a 520 to 929 1 to 410     Submitted on the opposite strand 410/410
(100 %)
0 diff
(100 %id)
CA776924 Pancreas, Purified pancreatic islet .a 521 to 1060 1 to 539     Submitted on the opposite strand 539/542
(99 %)
3 diff
(99.5 %id)
AW631470 2 pooled high-grade transitional celltumors, genitourinary tract .a 527 to 985 23 to 481       459/487
(94 %)
16 diff
(96.8 %id)
AA328512   .a 532 to 837 1 to 310       310/310
(100 %)
6 diff
(98.1 %id)
DW408535 Liver .a 535 to 861 17 to 343       327/343
(95 %)
6 diff
(98.3 %id)
AA748173 germinal center B cell .a 540 to 1036 1 to 496     Submitted on the opposite strand 496/496
(100 %)
2 diff
(99.6 %id)
BQ306868 breast .a 541 to 856 337 to 22       316/337
(93 %)
1 diff
(99.8 %id)
AW602695 breast .a 556 to 910 370 to 13       358/370
(96 %)
4 diff
(99.0 %id)
BE928182 colon .a 561 to 941 1 to 380       380/380
(100 %)
4 diff
(99.0 %id)
R63536 placenta .a 573 to 843 1 to 282     Submitted on the opposite strand 278/302
(92 %)
20 diff
(93.4 %id)
R76825 placenta .a 573 to 958 1 to 395     Submitted on the opposite strand 392/396
(98 %)
11 diff
(97.3 %id)
H00910 placenta .a 573 to 898 1 to 333     Submitted on the opposite strand 333/333
(100 %)
7 diff
(97.9 %id)
H00671 placenta .a 573 to 909 1 to 346     Submitted on the opposite strand 346/360
(96 %)
11 diff
(97.0 %id)
H06173 placenta .a 573 to 916 1 to 342     Submitted on the opposite strand 342/350
(97 %)
9 diff
(97.5 %id)
R72408 breast .a 573 to 890 1 to 327     Submitted on the opposite strand 327/330
(99 %)
14 diff
(95.8 %id)
AA808533 carcinoid, lung .a 573 to 953 1 to 381     Submitted on the opposite strand 381/381
(100 %)
3 diff
(99.3 %id)
AA887510 carcinoid, lung .a 573 to 1110 1 to 541     Submitted on the opposite strand 541/591
(91 %)
27 diff
(95.5 %id)
AA961604 pooled .a 573 to 955 1 to 383     Submitted on the opposite strand 383/383
(100 %)
0 diff
(100 %id)
AA995406 carcinoid, lung .a 573 to 956 1 to 385     Submitted on the opposite strand 385/385
(100 %)
3 diff
(99.3 %id)
AA987635 carcinoid, lung .a 573 to 919 1 to 346     Submitted on the opposite strand 346/346
(100 %)
26 diff
(92.5 %id)
AI039449   .a 573 to 992 1 to 420     Submitted on the opposite strand 420/420
(100 %)
1 diff
(99.8 %id)
AI221318 pooled .a 573 to 1019 1 to 445     Submitted on the opposite strand 445/514
(86 %)
10 diff
(98.1 %id)
AW008705 brain, glioblastoma (pooled) .a 573 to 950 1 to 380     Submitted on the opposite strand 380/380
(100 %)
8 diff
(97.9 %id)
C02910 heart .a 658 to 994 1 to 342       342/342
(100 %)
10 diff
(97.1 %id)
BM826035 Ascites, stomach .a 663 to 1056 1 to 394       394/394
(100 %)
0 diff
(100 %id)
BF082316 breast_normal .a 672 to 1092 421 to 3       419/433
(96 %)
4 diff
(99.1 %id)
BF804234 colon_ins .a 672 to 1053 395 to 14     Submitted on the opposite strand 382/395
(96 %)
0 diff
(100 %id)
BF755614 colon .a 679 to 1081 5 to 403       399/428
(93 %)
7 diff
(98.4 %id)
BF772335 epid_tumor .a 733 to 1038 306 to 1     Submitted on the opposite strand 306/306
(100 %)
10 diff
(96.8 %id)
AW797804 uterus .a 762 to 939 1 to 178       178/179
(99 %)
2 diff
(98.9 %id)
BE170515 head_neck .a 766 to 1023 1 to 258       258/266
(96 %)
4 diff
(98.5 %id)
AW404945 lymph .a 775 to 1088 7 to 320       314/320
(98 %)
0 diff
(100 %id)
N84444   .a 884 to 1115 1 to 232       232/242
(95 %)
13 diff
(94.7 %id)
AI201146   .a 894 to 1102 209 to 4       206/209
(98 %)
0 diff
(100 %id)
AW793909 uterus .a 903 to 1071 208 to 39       170/208
(81 %)
0 diff
(100 %id)
AI142508 brain, glioblastoma (pooled) .a 1073 to 1551 1 to 479     Submitted on the opposite strand 479/479
(100 %)
2 diff
(99.6 %id)
AI589059 brain, glioblastoma (pooled) .a 1075 to 1538 1 to 464     Submitted on the opposite strand 464/464
(100 %)
0 diff
(100 %id)
AW028036 brain, glioblastoma (pooled) .a 1075 to 1522 1 to 447     Submitted on the opposite strand 447/447
(100 %)
3 diff
(99.4 %id)
AW073320 brain, glioblastoma (pooled) .a 1075 to 1596 1 to 522   tiling clone, Submitted on the opposite strand 522/522
(100 %)
0 diff
(100 %id)
BE856237 brain, glioblastoma (pooled) .a 1075 to 1610 1 to 537   tiling clone, Submitted on the opposite strand 537/537
(100 %)
3 diff
(99.5 %id)
BI754323 brain .b 1 to 832 1 to 845 Q6S P7L P8Q G9E T10L ... tiling clone,   845/867
(97 %)
11 diff
(98.8 %id)
TI_57215771   .b 1 to 832 34 to 878 Q6S P7L P8Q G9E T10L ...     845/900
(93 %)
16 diff
(98.3 %id)
AA682782 liver and spleen .c 1 to 563 562 to -3   tiling clone,   562/562
(100 %)
7 diff
(98.8 %id)
AA987447 carcinoid, lung .c 79 to 574 1 to 495     Submitted on the opposite strand 495/516
(95 %)
8 diff
(98.5 %id)
AW768504 lymph node, lymphoma, follicular mixed small and largecell .c 79 to 581 1 to 504   tiling clone, Submitted on the opposite strand 504/521
(96 %)
8 diff
(98.5 %id)
N30765 placenta .c 80 to 666 1 to 595   tiling clone, Submitted on the opposite strand 595/596
(99 %)
16 diff
(97.4 %id)
N62120 multiple sclerosis lesions .c 80 to 572 1 to 494     Submitted on the opposite strand 494/494
(100 %)
1 diff
(99.8 %id)
AA436635   .c 80 to 550 1 to 471     Submitted on the opposite strand 471/473
(99 %)
2 diff
(99.6 %id)
AI079908   .c 80 to 570 1 to 491     Submitted on the opposite strand 491/491
(100 %)
0 diff
(100 %id)
AI186665 lung .c 80 to 552 1 to 473     Submitted on the opposite strand 473/473
(100 %)
0 diff
(100 %id)
AI335716 uterus .c 80 to 573 1 to 494   tiling clone, Submitted on the opposite strand 494/494
(100 %)
0 diff
(100 %id)
AI365385 B-cell, chronic lymphotic leukemia .c 80 to 579 1 to 503     Submitted on the opposite strand 501/586
(85 %)
11 diff
(98.2 %id)
BF591701 carcinoid, lung .c 80 to 537 1 to 459     Submitted on the opposite strand 459/459
(100 %)
6 diff
(98.7 %id)
TI_149310658   .c 576 to 1394 905 to 92   tiling clone, AAA   814/943
(86 %)
7 diff
(99.3 %id)
TI_149285273   .c 604 to 1394 872 to 86   tiling clone, AAA   787/797
(98 %)
7 diff
(99.2 %id)
BU688935 lung .c 743 to 1394 670 to 19   AAA   652/652
(100 %)
0 diff
(100 %id)
BM984804 lung .c 795 to 1394 619 to 19   AAA   601/601
(100 %)
1 diff
(99.9 %id)
CX761721 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 858 to 1566 709 to 7   tiling clone, Submitted on the opposite strand 703/860
(81 %)
0 diff
(100 %id)
DB574651 hypothalamus .c 953 to 1392 1 to 440     Submitted on the opposite strand 440/442
(99 %)
10 diff
(97.8 %id)
AW869132 stomach_normal .c 1104 to 1389 9 to 300       292/308
(94 %)
20 diff
(93.6 %id)
DC298880 adrenal gland .d 1 to 583 2 to 584       584/584
(100 %)
0 diff
(100 %id)
AK293502 cerebellum .d 1 to 1031 2 to 1032 exact tiling clone,   1032/1032
(100 %)
0 diff
(100 %id)
DC302907 cerebellum .d 1 to 545 2 to 546       546/546
(100 %)
0 diff
(100 %id)
R14822 whole brain .d 868 to 1109 1 to 240       240/240
(100 %)
6 diff
(97.5 %id)
R56400 whole brain .d 868 to 1306 1 to 439   tiling clone,   439/439
(100 %)
9 diff
(98.0 %id)
R56401 whole brain .d 2048 to 2448 416 to 14   tiling clone, AAA   403/403
(100 %)
8 diff
(98.1 %id)
R40127 whole brain .d 2160 to 2448 308 to 13   tiling clone, AAA   296/299
(98 %)
11 diff
(96.4 %id)
NM_002882.2   .e 1 to 884 1 to 884 exact RefSeq,   884/884
(100 %)
0 diff
(100 %id)
AV707046 adrenal gland .e 24 to 693 1 to 670   tiling clone,   670/670
(100 %)
2 diff
(99.8 %id)
TI_149287200   .e 26 to 884 881 to 30 A2P A3K A4D K5T D6H ... AAA   850/1118
(76 %)
31 diff
(97.3 %id)
BM915625 amelanotic melanoma, cell line, skin .e 37 to 884 24 to 875 E161T I162S E163K E164R R165E ... AAA   852/875
(97 %)
17 diff
(98.1 %id)
BI550277 brain, hippocampus .e 40 to 885 1 to 843 L96M K160T N174M D175I H176M ...     843/905
(93 %)
22 diff
(97.6 %id)
X83617   .e 48 to 884 1 to 837 exact     837/837
(100 %)
0 diff
(100 %id)
BU601609 mixed (pool of 40 RNAs) .e 53 to 622 1 to 576       576/875
(65 %)
14 diff
(98.4 %id)
BU595732 mixed (pool of 40 RNAs) .e 54 to 649 1 to 597       597/871
(68 %)
14 diff
(98.4 %id)
BU596550 mixed (pool of 40 RNAs) .e 54 to 635 1 to 582       582/624
(93 %)
4 diff
(99.4 %id)
BU597958 mixed (pool of 40 RNAs) .e 54 to 283 1 to 230       230/262
(87 %)
6 diff
(97.8 %id)
BU598629 mixed (pool of 40 RNAs) .e 54 to 828 1 to 798 K167X K173Q N174K D175*     798/835
(95 %)
30 diff
(96.5 %id)
BU602263 mixed (pool of 40 RNAs) .e 54 to 815 1 to 787 E178R V180S A181G E182G K183X ...     787/804
(97 %)
24 diff
(97.1 %id)
BI551971 brain, hippocampus .e 55 to 969 1 to 902 K167Q K168R A169K G170D S171Q ...     902/932
(96 %)
27 diff
(97.2 %id)
DB481131 hippocampus .e 56 to 528 1 to 473       473/473
(100 %)
1 diff
(99.8 %id)
DB474021 hippocampus .e 57 to 544 1 to 488       488/488
(100 %)
4 diff
(99.2 %id)
DB503415 hypothalamus .e 57 to 529 1 to 472       472/472
(100 %)
9 diff
(98.1 %id)
BP244609 Kidney .e 57 to 639 1 to 583       583/583
(100 %)
0 diff
(100 %id)
AI962209 pooled germ cell tumors .e 57 to 160 104 to 1       104/104
(100 %)
1 diff
(99.1 %id)
TI_44171684   .e 57 to 969 85 to 984 K167Q K168R A169K G170D S171Q ...     900/1014
(88 %)
31 diff
(97.0 %id)
CB120084 Liver .e 57 to 538 1 to 482       482/482
(100 %)
1 diff
(99.8 %id)
CB124080 Liver .e 57 to 623 1 to 567       567/567
(100 %)
0 diff
(100 %id)
CB124637 Liver .e 57 to 603 1 to 547       547/547
(100 %)
0 diff
(100 %id)
CB124428 Liver .e 57 to 624 1 to 568       568/568
(100 %)
2 diff
(99.7 %id)
CB124207 Liver .e 57 to 531 1 to 475       475/475
(100 %)
1 diff
(99.8 %id)
CB125330 Liver .e 57 to 605 1 to 549       549/549
(100 %)
0 diff
(100 %id)
CB125350 Liver .e 57 to 622 1 to 566       566/566
(100 %)
0 diff
(100 %id)
CB126533 Liver .e 57 to 588 1 to 532       532/533
(99 %)
1 diff
(99.9 %id)
CB124266 Liver .e 57 to 563 1 to 507       507/507
(100 %)
0 diff
(100 %id)
CB126736 Liver .e 57 to 531 1 to 475       475/475
(100 %)
1 diff
(99.8 %id)
CB125669 Liver .e 57 to 602 1 to 546       546/546
(100 %)
0 diff
(100 %id)
CB128145 Liver .e 57 to 548 1 to 492       492/495
(99 %)
1 diff
(99.8 %id)
DA431046 colon .e 58 to 574 2 to 518   capped   517/517
(100 %)
1 diff
(99.9 %id)
AA305252 colon .e 60 to 482 1 to 422       422/422
(100 %)
7 diff
(98.4 %id)
BX095019 liver and spleen .e 62 to 696 1 to 636       636/636
(100 %)
1 diff
(99.9 %id)
AW160474 brain, frontal lobe .e 62 to 619 1 to 553   fully sequenced,   553/553
(100 %)
4 diff
(99.3 %id)
AW160466 brain, frontal lobe .e 62 to 619 1 to 555   fully sequenced,   555/555
(100 %)
2 diff
(99.7 %id)
AW160825 brain, frontal lobe .e 62 to 636 1 to 572   fully sequenced,   572/572
(100 %)
4 diff
(99.4 %id)
BP431640   .e 63 to 152 1 to 90       90/98
(91 %)
1 diff
(99.0 %id)
CF134764 CNCAP(3)T-225 cell line, Prostate .e 64 to 591 1 to 528       528/532
(99 %)
8 diff
(98.5 %id)
AV655673 corresponding non cancerous liver tissue .e 67 to 693 1 to 627     Submitted on the opposite strand 627/627
(100 %)
0 diff
(100 %id)
TI_227713328   .e 67 to 884 898 to 84 E28D P34L F58C A85X AAA   815/1018
(80 %)
14 diff
(98.7 %id)
AW955492   .e 68 to 656 1 to 591       591/610
(96 %)
8 diff
(98.7 %id)
CN349817 embryonic stem cells, cell lines H1, H7, andH9 .e 69 to 774 1 to 706 exact     706/706
(100 %)
2 diff
(99.8 %id)
BQ653572 hepatocellular carcinoma, cell line, Liver .e 69 to 842 1 to 777 exact     777/1026
(75 %)
12 diff
(98.9 %id)
BG419028 Kidney, renal cell adenocarcinoma .e 76 to 769 1 to 692 K168Q N174M D175I H176M A177P ...     692/818
(84 %)
9 diff
(98.9 %id)
TI_227715564   .e 79 to 884 874 to 86 A2C D10T H11M D12Y T13F ... AAA   789/978
(80 %)
24 diff
(97.6 %id)
AA082173   .e 81 to 511 1 to 430       430/430
(100 %)
6 diff
(98.7 %id)
AA081397   .e 91 to 554 1 to 472   fully sequenced,   472/472
(100 %)
11 diff
(97.7 %id)
AA159158 Pancreas .e 95 to 475 1 to 383       383/383
(100 %)
4 diff
(99.0 %id)
CR456556   .e 96 to 893 1 to 798 exact     798/798
(100 %)
0 diff
(100 %id)
BF944324 nervous_normal .e 136 to 415 281 to 2     Submitted on the opposite strand 280/296
(94 %)
0 diff
(100 %id)
CU013444 Synthetic constructs .e 148 to 763 18 to 633 exact     616/637
(96 %)
12 diff
(98.2 %id)
BE673715 carcinoid, lung .e 152 to 541 1 to 390     Submitted on the opposite strand 390/390
(100 %)
1 diff
(99.8 %id)
BF445044 carcinoid, lung .e 152 to 535 1 to 385     Submitted on the opposite strand 385/385
(100 %)
7 diff
(98.2 %id)
AA878214 carcinoid, lung .e 153 to 884 1 to 733     Submitted on the opposite strand 733/733
(100 %)
12 diff
(98.4 %id)
AI031632 brain, glioblastoma (pooled) .e 153 to 786 1 to 634     Submitted on the opposite strand 634/634
(100 %)
6 diff
(99.1 %id)
AI185137 lung .e 153 to 721 1 to 568     Submitted on the opposite strand 568/568
(100 %)
7 diff
(98.8 %id)
AI240120 pooled .e 153 to 760 1 to 608     Submitted on the opposite strand 608/608
(100 %)
6 diff
(99.1 %id)
AI277046 adenocarcinoma, colon .e 153 to 596 1 to 443     Submitted on the opposite strand 443/451
(98 %)
23 diff
(95.0 %id)
AI276741 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 153 to 491 1 to 338     Submitted on the opposite strand 338/338
(100 %)
5 diff
(98.6 %id)
AW054822 anaplastic oligodendroglioma, brain .e 153 to 682 1 to 530     Submitted on the opposite strand 530/530
(100 %)
0 diff
(100 %id)
BE675938 B-cell, chronic lymphotic leukemia .e 153 to 682 1 to 531     Submitted on the opposite strand 531/531
(100 %)
1 diff
(99.9 %id)
TI_151706137   .e 153 to 886 48 to 782     Submitted on the opposite strand 735/1032
(71 %)
4 diff
(99.7 %id)
BM264070 Pancreas, Purified pancreatic islet .e 154 to 752 1 to 599     Submitted on the opposite strand 599/599
(100 %)
0 diff
(100 %id)
AA989319 carcinoid, lung .e 154 to 432 1 to 279     Submitted on the opposite strand 279/279
(100 %)
1 diff
(99.7 %id)
TI_57165142   .e 156 to 847 741 to 53     Submitted on the opposite strand 689/930
(74 %)
9 diff
(99.1 %id)
AA953715 carcinoid, lung .e 157 to 713 5 to 556     Submitted on the opposite strand 552/556
(99 %)
27 diff
(95.2 %id)
CB054165 brain, glioblastoma (pooled) .e 161 to 783 1 to 623     Submitted on the opposite strand 623/623
(100 %)
0 diff
(100 %id)
BI838640 pooled pancreas and spleen .e 163 to 847 701 to 20     Submitted on the opposite strand 682/703
(97 %)
5 diff
(99.3 %id)
BI838646 pooled pancreas and spleen .e 163 to 847 704 to 20     Submitted on the opposite strand 685/706
(97 %)
7 diff
(99.1 %id)
TI_57165148   .e 163 to 847 772 to 88     Submitted on the opposite strand 685/1076
(63 %)
7 diff
(99.4 %id)
BQ229891 epithelioid carcinoma, Pancreas .e 176 to 891 766 to 43   AAA Submitted on the opposite strand 724/793
(91 %)
7 diff
(99.2 %id)
BM792208 Ascites, stomach .e 177 to 856 1 to 681       681/681
(100 %)
2 diff
(99.8 %id)
BI334300 cervical carcinoma cell line, cervix .e 182 to 886 1 to 703       703/706
(99 %)
4 diff
(99.5 %id)
TI_149309772   .e 189 to 1057 958 to 97   AAA   862/951
(90 %)
14 diff
(98.6 %id)
BG576793 breast, mammary adenocarcinoma, cell line .e 204 to 993 1 to 795       795/796
(99 %)
12 diff
(98.5 %id)
AA082577   .e 205 to 539 1 to 335   fully sequenced,   335/335
(100 %)
0 diff
(100 %id)
AA081947   .e 205 to 459 1 to 255   fully sequenced,   255/255
(100 %)
0 diff
(100 %id)
TI_154144207   .e 206 to 831 716 to 85     Submitted on the opposite strand 632/792
(79 %)
7 diff
(99.2 %id)
CA391598 eye, RPE/choroid .e 209 to 891 1 to 683       683/683
(100 %)
0 diff
(100 %id)
CD366690 Alveolar Macrophage, lung .e 223 to 884 678 to 19   AAA   660/660
(100 %)
3 diff
(99.6 %id)
CD368569 Alveolar Macrophage, lung .e 233 to 884 669 to 19   AAA   651/651
(100 %)
1 diff
(99.9 %id)
W75946 heart .e 244 to 709 1 to 476       476/479
(99 %)
15 diff
(96.9 %id)
AA402044 ovarian tumor, ovary .e 245 to 856 1 to 613     Submitted on the opposite strand 613/613
(100 %)
3 diff
(99.6 %id)
AW406584 lymph .e 251 to 831 588 to 8     Submitted on the opposite strand 581/588
(98 %)
0 diff
(100 %id)
CD367641 Alveolar Macrophage, lung .e 253 to 884 650 to 19   AAA   632/632
(100 %)
1 diff
(99.9 %id)
AA402190 ovarian tumor, ovary .e 258 to 871 614 to 1     Submitted on the opposite strand 614/614
(100 %)
2 diff
(99.7 %id)
BU627705 Bone, Enchondroma cell line .e 259 to 887 647 to 19   AAA   629/629
(100 %)
0 diff
(100 %id)
CA421993 Bone, Enchondroma cell line .e 261 to 884 642 to 19   AAA   624/624
(100 %)
0 diff
(100 %id)
DR157876 human embryonic stem cells differentiated toan early endodermal cell type .e 272 to 886 617 to 3     Submitted on the opposite strand 615/617
(99 %)
0 diff
(100 %id)
CB123777 Liver .e 272 to 782 1 to 511       511/511
(100 %)
0 diff
(100 %id)
CN349821 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 283 to 882 1 to 600       600/600
(100 %)
3 diff
(99.5 %id)
BQ224996 epithelioid carcinoma, Pancreas .e 285 to 1058 1 to 776   tiling clone, AAA   776/776
(100 %)
6 diff
(99.3 %id)
BG284348 adenocarcinoma, cell line, Prostate .e 288 to 885 1 to 597   AAA   597/597
(100 %)
6 diff
(99.0 %id)
BM264373 Pancreas, Purified pancreatic islet .e 302 to 900 636 to 38     Submitted on the opposite strand 599/653
(91 %)
0 diff
(100 %id)
AI421960 brain, glioblastoma (pooled) .e 302 to 852 10 to 561     Submitted on the opposite strand 552/561
(98 %)
16 diff
(97.2 %id)
TI_154143887   .e 307 to 830 608 to 83     Submitted on the opposite strand 526/527
(99 %)
7 diff
(98.7 %id)
R68415 placenta .e 317 to 654 1 to 344       344/365
(94 %)
13 diff
(96.5 %id)
AA587132 larynx .e 328 to 884 567 to 11   AAA   557/557
(100 %)
0 diff
(100 %id)
BM021935 Islets of Langerhans, Pancreas .e 336 to 685 1 to 349   fully sequenced,   349/349
(100 %)
6 diff
(98.3 %id)
BU688052 lung .e 341 to 1057 736 to 19   AAA   718/718
(100 %)
1 diff
(99.9 %id)
CA428173 Bone, Subchondral Bone .e 341 to 1057 735 to 19   tiling clone, AAA   717/717
(100 %)
0 diff
(100 %id)
BF082321 breast_normal .e 344 to 793 12 to 460       449/463
(96 %)
11 diff
(97.7 %id)
TI_154143184   .e 353 to 886 635 to 97     Submitted on the opposite strand 539/828
(65 %)
11 diff
(98.7 %id)
BE782204 eye, retinoblastoma .e 362 to 1050 1 to 685       685/688
(99 %)
13 diff
(98.2 %id)
BF939848 brain, glioblastoma (pooled) .e 405 to 884 480 to 1       480/480
(100 %)
0 diff
(100 %id)
BU955038 mixed (pool of 40 RNAs) .e 408 to 888 1 to 480       480/873
(54 %)
6 diff
(99.4 %id)
AW405797 lymph .e 410 to 886 489 to 13     Submitted on the opposite strand 477/489
(97 %)
1 diff
(99.8 %id)
AW021038.
matches multiple genes
cochlea, ear .e 411 to 884 8 to 481   AAA also hits gene vordor 474/481
(98 %)
6 diff
(98.8 %id)
BG170686 hypernephroma, cell line, Kidney .e 428 to 1062 1 to 635   AAA   635/635
(100 %)
15 diff
(97.7 %id)
AA102573   .e 429 to 888 463 to 2   fully sequenced,   462/463
(99 %)
3 diff
(99.4 %id)
BQ028526 placenta, Placenta Choriocarcinoma .e 432 to 884 471 to 19   AAA   453/455
(99 %)
3 diff
(99.4 %id)
TI_154142027   .e 447 to 1056 80 to 690   AAA   611/611
(100 %)
15 diff
(97.6 %id)
DB525241 testis .e 455 to 886 1 to 433     Submitted on the opposite strand 433/440
(98 %)
3 diff
(99.4 %id)
H00761 placenta .e 460 to 879 433 to 1     Submitted on the opposite strand 433/445
(97 %)
12 diff
(97.4 %id)
BG110138 Bone, osteosarcoma, cell line .e 460 to 1036 38 to 615       578/615
(93 %)
13 diff
(97.9 %id)
BM563009 brain, medulla .e 460 to 1057 19 to 616       598/1160
(51 %)
7 diff
(99.4 %id)
TI_154141628   .e 462 to 1057 682 to 89     Submitted on the opposite strand 594/763
(77 %)
23 diff
(97.0 %id)
AW406305 lymph .e 466 to 836 373 to 2     Submitted on the opposite strand 372/373
(99 %)
1 diff
(99.8 %id)
AI913970 colon .e 473 to 1057 588 to 8       581/592
(98 %)
15 diff
(97.5 %id)
AI744789 ovary, tumor, 5 pooled (see description) .e 479 to 884 406 to 1       406/406
(100 %)
0 diff
(100 %id)
CA308948 Alveolar Macrophage, lung .e 482 to 1057 592 to 19   AAA   574/574
(100 %)
1 diff
(99.9 %id)
TI_154141067   .e 490 to 974 565 to 80     Submitted on the opposite strand 486/488
(99 %)
11 diff
(97.8 %id)
AA724988 pooled .e 505 to 886 383 to 2       382/383
(99 %)
0 diff
(100 %id)
AA962702 colon, colon tumor .e 506 to 1057 542 to 2       541/553
(97 %)
8 diff
(98.6 %id)
AA101142   .e 509 to 887 379 to 1   fully sequenced,   379/379
(100 %)
0 diff
(100 %id)
R68336 placenta .e 514 to 901 1 to 391       391/391
(100 %)
3 diff
(99.3 %id)
AA081398   .e 524 to 886 374 to 2   fully sequenced,   373/374
(99 %)
5 diff
(98.7 %id)
R72447 breast .e 527 to 871 354 to 1     Submitted on the opposite strand 354/355
(99 %)
10 diff
(97.2 %id)
AW162353 brain, frontal lobe .e 558 to 1056 500 to 8   fully sequenced,   493/500
(98 %)
7 diff
(98.6 %id)
AW162478 brain, frontal lobe .e 558 to 1056 500 to 8   fully sequenced,   493/500
(98 %)
2 diff
(99.6 %id)
AA102587   .e 564 to 882 319 to 1       319/398
(80 %)
4 diff
(99.0 %id)
BF792831 adrenal cortex carcinoma, cell line, adrenal gland .e 575 to 882 1 to 308       308/684
(45 %)
1 diff
(99.9 %id)
BG996089 head_neck .e 583 to 883 1 to 301   AAA   301/301
(100 %)
19 diff
(93.7 %id)
AI018348 pooled .e 587 to 1057 482 to 12   AAA   471/471
(100 %)
2 diff
(99.6 %id)
DB549949 hippocampus .e 589 to 1057 7 to 474     Submitted on the opposite strand 468/474
(98 %)
4 diff
(99.2 %id)
W03069 melanocyte .e 589 to 1057 500 to 28   AAA Submitted on the opposite strand 473/549
(86 %)
6 diff
(99.0 %id)
AI027688   .e 589 to 1057 472 to 4       469/482
(97 %)
3 diff
(99.4 %id)
DB522352 testis .e 591 to 1057 1 to 468     Submitted on the opposite strand 468/468
(100 %)
1 diff
(99.8 %id)
BE714195 head_neck .e 592 to 898 312 to 12       301/312
(96 %)
0 diff
(100 %id)
BQ639584 eye, retina .e 595 to 1057 470 to 8     Submitted on the opposite strand 463/470
(98 %)
0 diff
(100 %id)
CA397521 eye, RPE/choroid .e 596 to 1057 463 to 1     Submitted on the opposite strand 463/463
(100 %)
1 diff
(99.8 %id)
AW405602 lymph .e 596 to 1057 469 to 8     Submitted on the opposite strand 462/470
(98 %)
0 diff
(100 %id)
AI817371 lymph node, lymphoma, follicular mixed small and largecell .e 599 to 1056 463 to 5       459/463
(99 %)
0 diff
(100 %id)
AI609250 normal gingiva (cell line from primarykeratinocytes) .e 600 to 1057 466 to 8       459/466
(98 %)
0 diff
(100 %id)
AW404200 lymph .e 603 to 975 379 to 7     Submitted on the opposite strand 373/379
(98 %)
0 diff
(100 %id)
AW162365 brain, frontal lobe .e 606 to 1056 454 to 8   fully sequenced,   447/454
(98 %)
1 diff
(99.8 %id)
BI966122 Islets of Langerhans, Pancreas .e 624 to 1057 450 to 17   fully sequenced, AAA   434/434
(100 %)
4 diff
(99.1 %id)
CN411029 embryonic stem cells, DMSO-treated H9 cellline .e 628 to 881 1 to 254       254/254
(100 %)
0 diff
(100 %id)
AA009777.
matches multiple genes
liver and spleen .e 630 to 1050 421 to 1     also hits gene vordor 421/421
(100 %)
0 diff
(100 %id)
BP429252   .e 653 to 923 15 to 282       268/282
(95 %)
6 diff
(97.9 %id)
N56770 placenta .e 655 to 829 174 to 1     Submitted on the opposite strand 174/174
(100 %)
2 diff
(98.9 %id)
BM975726 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 656 to 1057 419 to 19   AAA   401/408
(98 %)
1 diff
(99.8 %id)
AA700156 liver and spleen .e 659 to 884 1 to 226     Submitted on the opposite strand 226/226
(100 %)
0 diff
(100 %id)
D25747   .e 672 to 886 1 to 214     Submitted on the opposite strand 214/215
(99 %)
2 diff
(99.1 %id)
EC534946 Prostate .e 705 to 839 1 to 131       131/135
(97 %)
4 diff
(97.1 %id)
H06437 placenta .e 723 to 882 160 to 1     Submitted on the opposite strand 160/161
(99 %)
3 diff
(98.2 %id)
W70204 heart .e 727 to 1057 332 to 1       332/332
(100 %)
1 diff
(99.7 %id)
R68416 placenta .e 739 to 1051 320 to 8       313/320
(97 %)
0 diff
(100 %id)
EC441620 Prostate .e 743 to 894 1 to 151       151/151
(100 %)
1 diff
(99.4 %id)
EC461422 Prostate .e 761 to 883 1 to 118       118/122
(96 %)
5 diff
(96.0 %id)
AI638429 pooled germ cell tumors .f 1 to 245 245 to 1   tiling clone,   245/245
(100 %)
0 diff
(100 %id)
C18566 placenta .f 2 to 202 1 to 200       200/200
(100 %)
4 diff
(98.0 %id)
AI862473 colon, colon tumor, RER+ .f 6 to 264 259 to 1       259/259
(100 %)
0 diff
(100 %id)
DB459798 testis .f 26 to 477 1 to 452       452/452
(100 %)
1 diff
(99.8 %id)
AW205761   .f 26 to 263 238 to 1       238/244
(97 %)
1 diff
(99.6 %id)
AI433862 Kidney .f 31 to 264 234 to 1       234/234
(100 %)
0 diff
(100 %id)
AI795907 Kidney .f 31 to 245 215 to 1       215/215
(100 %)
0 diff
(100 %id)
CN349820 embryonic stem cells, cell lines H1, H7, andH9 .f 53 to 635 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
CN349827 embryonic stem cells, DMSO-treated H9 cellline .f 60 to 255 10 to 205       196/205
(95 %)
6 diff
(97.1 %id)
BF001980 colon, colon tumor, RER+ .f 60 to 260 201 to 1       201/201
(100 %)
0 diff
(100 %id)
CB157924 Liver .f 65 to 265 1 to 201       201/201
(100 %)
0 diff
(100 %id)
BE221519 carcinoid, lung .f 67 to 264 198 to 1       198/198
(100 %)
0 diff
(100 %id)
AW594324 pooled germ cell tumors .f 68 to 264 197 to 1       197/197
(100 %)
0 diff
(100 %id)
BG504479 embryonal carcinoma, testis .f 74 to 756 1 to 683       683/685
(99 %)
18 diff
(97.4 %id)
CN349822 embryonic stem cells, cell lines H1, H7, andH9 .f 78 to 279 1 to 201       201/201
(100 %)
2 diff
(99.1 %id)
EC525210 Prostate .f 95 to 220 1 to 125       125/125
(100 %)
3 diff
(97.6 %id)
EC481268 Prostate .f 96 to 220 1 to 125       125/125
(100 %)
1 diff
(99.2 %id)
EC524645 Prostate .f 96 to 220 1 to 125       125/125
(100 %)
1 diff
(99.2 %id)
EC568561 Prostate .f 96 to 220 1 to 125       125/125
(100 %)
1 diff
(99.2 %id)
EC583871 Prostate .f 96 to 220 1 to 128       128/128
(100 %)
4 diff
(96.9 %id)
BF967453 brain, hypothalamus .f 103 to 488 1 to 403       385/403
(95 %)
11 diff
(97.3 %id)
D38076 blood .f 105 to 985 1 to 881 exact     881/881
(100 %)
0 diff
(100 %id)
DB456916 testis .f 107 to 376 1 to 270       270/270
(100 %)
0 diff
(100 %id)
AU098498   .f 108 to 407 1 to 300       300/300
(100 %)
1 diff
(99.7 %id)
AU102701   .f 108 to 157 1 to 50       50/50
(100 %)
1 diff
(98.0 %id)
BP206613 coronary artery .f 108 to 689 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
AK223506   .f 109 to 920 1 to 812 E61V     812/812
(100 %)
1 diff
(99.9 %id)
BI461099 testis .f 113 to 831 1 to 719       719/719
(100 %)
5 diff
(99.4 %id)
TI_154126773   .f 114 to 869 832 to 82 exact AAA   751/916
(81 %)
9 diff
(99.1 %id)
TI_44348907   .f 115 to 985 81 to 951 N101K H102P Y103L I104H T105H ... AAA   871/951
(91 %)
26 diff
(97.3 %id)
BG527409 lung, mucoepidermoid carcinoma .f 121 to 252 1 to 132       132/132
(100 %)
0 diff
(100 %id)
BU180071 ductal carcinoma, cell line, Pancreas .f 121 to 855 17 to 761       745/948
(78 %)
31 diff
(96.8 %id)
BI561228 testis .f 122 to 985 1 to 865 N101K H102P Y103L I104H T105H ... AAA   865/865
(100 %)
21 diff
(97.6 %id)
EL955699 eyeball .f 124 to 621 11 to 510       500/510
(98 %)
14 diff
(97.3 %id)
BU173869 melanotic melanoma, cell line, skin .f 125 to 953 10 to 842 K193R E194R D195M A196L E197K ... AAA   833/894
(93 %)
29 diff
(96.8 %id)
CN349814 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .f 126 to 758 1 to 632       632/632
(100 %)
0 diff
(100 %id)
CN349813 embryonic stem cells, cell lines H1, H7, andH9 .f 130 to 640 1 to 511       511/511
(100 %)
0 diff
(100 %id)
DN993223 brain, whole brain .f 131 to 750 1 to 620       620/621
(99 %)
6 diff
(99.1 %id)
AW405962 lymph .f 133 to 442 1 to 310       310/310
(100 %)
5 diff
(98.4 %id)
BF237555 leiomyosarcoma cell line, uterus .f 137 to 758 1 to 628       628/1133
(55 %)
17 diff
(98.5 %id)
TI_154143435   .f 138 to 695 80 to 636       557/560
(99 %)
19 diff
(96.7 %id)
BQ687821 ductal carcinoma, cell line, Pancreas .f 139 to 855 1 to 729       726/983
(73 %)
13 diff
(98.7 %id)
CR590513 Neuroblastoma Cot 10-normalized .f 140 to 1142 1 to 1003 exact tiling clone,   1003/1003
(100 %)
0 diff
(100 %id)
DB448259 testis .f 140 to 563 1 to 424       424/432
(98 %)
2 diff
(99.6 %id)
BM807682 amelanotic melanoma, cell line, skin .f 141 to 758 25 to 647       623/1281
(48 %)
16 diff
(98.8 %id)
BP431904   .f 141 to 256 1 to 116       116/120
(96 %)
1 diff
(99.2 %id)
BM912759 amelanotic melanoma, cell line, skin .f 143 to 833 1 to 697       694/1141
(60 %)
18 diff
(98.5 %id)
BQ684884 ductal carcinoma, cell line, Pancreas .f 144 to 986 1 to 847 E181G L183A E184R A185S L186S ... AAA   847/847
(100 %)
12 diff
(98.6 %id)
BG280903 melanotic melanoma, skin .f 147 to 907 1 to 772 A3C K5R D6T T7L H8M ...     772/949
(81 %)
32 diff
(96.7 %id)
BX393401 Neuroblastoma Cot 10-normalized .f 153 to 1056 14 to 915 V31X E37X V179X     902/915
(98 %)
7 diff
(99.3 %id)
BE728883 melanotic melanoma, skin .f 166 to 904 1 to 739 L138W A139P I140S R141A F142S ...     736/741
(99 %)
17 diff
(97.8 %id)
H67416 liver and spleen .f 169 to 664 12 to 512       501/513
(97 %)
32 diff
(93.8 %id)
BQ927398 carcinoma, cell line, Prostate .f 172 to 985 1 to 819 E177R E197X Q200A AAA   819/819
(100 %)
15 diff
(98.2 %id)
BM046305 carcinoma, cell line, Prostate .f 173 to 929 1 to 774 A4P K5R D6T T7L H8M ...     685/868
(78 %)
32 diff
(96.4 %id)
BG757304 B-cells, primary B-cells from tonsils (cell line) .f 174 to 935 1 to 764 K160N E161R I162D E163R E164R ... AAA   764/814
(93 %)
13 diff
(98.5 %id)
BC071998 Lung, small cell carcinoma .f 175 to 985 1 to 809 T13F S14H T15* available from MGC, AAA   809/809
(100 %)
1 diff
(99.9 %id)
BC071999 Eye, retinoblastoma .f 175 to 985 378 to 1188 N173M D174I H175M A176P E177K ... tiling clone, available from MGC, AAA   811/1188
(68 %)
8 diff
(99.4 %id)
TI_154162865   .f 175 to 962 76 to 855 G115S K152X E163X S170*     780/1151
(67 %)
31 diff
(97.4 %id)
BM709219 eye, optic nerve .f 175 to 614 1 to 440   fully sequenced,   440/440
(100 %)
0 diff
(100 %id)
BE792026 lung, small cell carcinoma .f 194 to 954 1 to 753 T13F S14H T15* available from MGC,   753/889
(84 %)
6 diff
(99.4 %id)
CA416833 Chondrosarcoma Cell line .f 202 to 869 686 to 19 exact AAA   668/668
(100 %)
0 diff
(100 %id)
CN349818 embryonic stem cells, cell lines H1, H7, andH9 .f 214 to 930 1 to 717 exact     717/717
(100 %)
1 diff
(99.9 %id)
N22870 melanocyte .f 257 to 769 1 to 516     Submitted on the opposite strand 516/518
(99 %)
9 diff
(98.3 %id)
N21675 melanocyte .f 257 to 856 1 to 602     Submitted on the opposite strand 602/639
(94 %)
16 diff
(97.5 %id)
AA279295 germinal center B cell .f 257 to 869 1 to 609     Submitted on the opposite strand 609/617
(98 %)
6 diff
(99.1 %id)
AA928799 pooled .f 257 to 985 1 to 731     Submitted on the opposite strand 731/731
(100 %)
13 diff
(98.3 %id)
AI279067 carcinoid, lung .f 257 to 932 1 to 684     Submitted on the opposite strand 681/684
(99 %)
33 diff
(95.2 %id)
AI806268 pooled .f 257 to 860 1 to 603     Submitted on the opposite strand 603/603
(100 %)
12 diff
(98.1 %id)
AW131559 brain, medulloblastoma .f 257 to 940 1 to 682     Submitted on the opposite strand 682/682
(100 %)
10 diff
(98.6 %id)
BF058728 fibrotheoma, ovary .f 257 to 853 1 to 600     Submitted on the opposite strand 597/600
(99 %)
15 diff
(97.5 %id)
BM264494 Pancreas, Purified pancreatic islet .f 260 to 853 1 to 594     Submitted on the opposite strand 594/594
(100 %)
1 diff
(99.9 %id)
AI806189 pooled .f 266 to 811 1 to 546     Submitted on the opposite strand 546/546
(100 %)
8 diff
(98.6 %id)
AI276506 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 275 to 868 1 to 594     Submitted on the opposite strand 594/594
(100 %)
2 diff
(99.7 %id)
AI421292 brain, glioblastoma (pooled) .f 275 to 985 1 to 718     Submitted on the opposite strand 715/718
(99 %)
26 diff
(96.4 %id)
BU601553 mixed (pool of 40 RNAs) .f 285 to 955 1 to 677       677/743
(91 %)
13 diff
(98.3 %id)
BG054718 brain, glioblastoma (pooled) .f 290 to 853 1 to 564     Submitted on the opposite strand 564/564
(100 %)
7 diff
(98.8 %id)
AI301038 carcinoid, lung .f 291 to 985 1 to 695     Submitted on the opposite strand 695/695
(100 %)
4 diff
(99.5 %id)
CK824836 Pancreas, Purified pancreatic islet .f 291 to 723 1 to 433   fully sequenced,   433/433
(100 %)
0 diff
(100 %id)
AW303602 pooled .f 296 to 962 1 to 668     Submitted on the opposite strand 668/668
(100 %)
2 diff
(99.8 %id)
BU187626 eye, retinoblastoma .f 299 to 985 1 to 687       687/687
(100 %)
1 diff
(99.9 %id)
BG927073 cartilage .f 305 to 870 86 to 650       565/582
(97 %)
6 diff
(99.0 %id)
BM824732 Ascites, stomach .f 315 to 859 1 to 545       545/545
(100 %)
0 diff
(100 %id)
BE884073 leiomyosarcoma, uterus .f 339 to 979 686 to 1     Submitted on the opposite strand 509/796
(63 %)
35 diff
(95.7 %id)
AA720862 synovial sarcoma .f 343 to 870 528 to 1       528/528
(100 %)
4 diff
(99.3 %id)
AA843994 parathyroid gland, parathyroid tumor .f 349 to 781 1 to 433     Submitted on the opposite strand 433/433
(100 %)
4 diff
(99.1 %id)
BQ773599 Chondrosarcoma Grade II, Left Pelvis .f 352 to 985 652 to 19   AAA   634/634
(100 %)
1 diff
(99.9 %id)
CA422374 cell lines, Chondrosarcoma .f 356 to 985 647 to 19   AAA   629/629
(100 %)
2 diff
(99.7 %id)
BM824168 Ascites, stomach .f 391 to 820 1 to 433       430/433
(99 %)
5 diff
(98.9 %id)
TI_149287700   .f 398 to 1158 871 to 111   AAA   758/951
(79 %)
16 diff
(98.4 %id)
TI_149308766   .f 400 to 1157 838 to 85   AAA   754/940
(80 %)
24 diff
(97.5 %id)
AA775716 heart .f 409 to 927 512 to 1       512/521
(98 %)
31 diff
(94.1 %id)
CN349812 embryonic stem cells, DMSO-treated H9 cellline .f 417 to 1042 1 to 627       627/627
(100 %)
1 diff
(99.9 %id)
BU521571 leiomyosarcoma, uterus .f 442 to 1158 741 to 23   AAA Submitted on the opposite strand 719/947
(75 %)
11 diff
(98.9 %id)
CA420464 Bone, Enchondroma cell line .f 446 to 985 558 to 19   AAA   540/540
(100 %)
0 diff
(100 %id)
AA703081 liver and spleen .f 454 to 985 525 to 1       525/529
(99 %)
7 diff
(98.7 %id)
CA414526 Chondrosarcoma Grade II, Left Pelvis .f 454 to 985 550 to 19   AAA   532/532
(100 %)
2 diff
(99.7 %id)
AI247841 liver and spleen .f 457 to 988 532 to 1       532/532
(100 %)
13 diff
(97.6 %id)
AA258285 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 467 to 985 519 to 1     Submitted on the opposite strand 519/519
(100 %)
25 diff
(95.2 %id)
TI_149277673   .f 480 to 1158 776 to 101   AAA   676/676
(100 %)
4 diff
(99.5 %id)
TI_149277697   .f 481 to 1158 777 to 101   AAA   677/677
(100 %)
2 diff
(99.8 %id)
BM800272 leiomyosarcoma, uterus .f 510 to 1157 12 to 656       645/679
(94 %)
9 diff
(98.7 %id)
C14651   .f 511 to 939 1 to 427       427/427
(100 %)
2 diff
(99.6 %id)
C15440   .f 511 to 784 1 to 270       270/270
(100 %)
6 diff
(97.8 %id)
TI_149279693   .f 542 to 1158 743 to 125   AAA   619/1178
(52 %)
6 diff
(99.5 %id)
BM969704 lung, Primary Lung Epithelial Cells .f 542 to 1158 637 to 19   AAA   619/627
(98 %)
6 diff
(99.1 %id)
AA360917   .f 560 to 806 1 to 247       247/248
(99 %)
1 diff
(99.6 %id)
BU677859 lung .f 564 to 1158 612 to 19   AAA   594/598
(99 %)
1 diff
(99.9 %id)
AA320323 adipose tissue, white .f 569 to 940 1 to 368       368/370
(99 %)
8 diff
(97.9 %id)
TI_149299387   .f 569 to 1158 691 to 105   AAA   587/778
(75 %)
14 diff
(98.3 %id)
BU677880 lung .f 570 to 1158 607 to 19   AAA   589/589
(100 %)
0 diff
(100 %id)
BU681100 lung .f 570 to 1158 611 to 19   AAA   590/593
(99 %)
3 diff
(99.5 %id)
BM271858 Pancreas, Purified pancreatic islet .f 578 to 1152 574 to 1     Submitted on the opposite strand 574/574
(100 %)
8 diff
(98.7 %id)
BU732357 eye, optic nerve .f 584 to 1158 593 to 19   fully sequenced, AAA   575/575
(100 %)
2 diff
(99.7 %id)
BU687222 lung .f 587 to 1157 591 to 19   AAA   573/573
(100 %)
4 diff
(99.4 %id)
BG959221 colon .f 608 to 983 1 to 379       379/379
(100 %)
7 diff
(98.2 %id)
AA576939 colon, colon tumor RER+ .f 611 to 984 374 to 1       374/374
(100 %)
0 diff
(100 %id)
AW793798 uterus .f 623 to 826 1 to 203       203/206
(98 %)
2 diff
(99.1 %id)
TI_154141430   .f 623 to 1092 549 to 77     Submitted on the opposite strand 470/475
(98 %)
17 diff
(96.5 %id)
CN349824 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .f 638 to 1113 476 to 1     Submitted on the opposite strand 476/476
(100 %)
1 diff
(99.8 %id)
AW949778   .f 642 to 856 1 to 216       216/216
(100 %)
3 diff
(98.7 %id)
AW949786   .f 642 to 1158 1 to 517   AAA   517/517
(100 %)
2 diff
(99.7 %id)
BG290299 bladder, transitional cell papilloma, cell line .f 646 to 1155 1 to 514       514/565
(90 %)
9 diff
(98.5 %id)
AA370798 Prostate .f 647 to 914 1 to 269       269/269
(100 %)
1 diff
(99.7 %id)
CK824835 Pancreas, Purified pancreatic islet .f 662 to 1158 511 to 16   fully sequenced, AAA   496/496
(100 %)
0 diff
(100 %id)
BE714210 head_neck .f 696 to 973 278 to 1       278/278
(100 %)
4 diff
(98.6 %id)
BE714234 head_neck .f 696 to 987 1 to 292       292/292
(100 %)
3 diff
(99.0 %id)
H67367 liver and spleen .f 696 to 969 273 to 1       273/401
(68 %)
1 diff
(99.8 %id)
N27226 melanocyte .f 701 to 1155 460 to 1     Submitted on the opposite strand 457/460
(99 %)
7 diff
(98.5 %id)
DB542813 hippocampus .f 710 to 1158 1 to 449     Submitted on the opposite strand 449/449
(100 %)
1 diff
(99.8 %id)
AW404476 lymph .f 721 to 1095 382 to 8     Submitted on the opposite strand 372/382
(97 %)
1 diff
(99.8 %id)
BP297856   .f 724 to 985 1 to 262   AAA   262/262
(100 %)
2 diff
(99.3 %id)
AW873858 Pancreas .f 758 to 1158 405 to 3       403/422
(95 %)
0 diff
(100 %id)
AW404614 lymph .f 759 to 1158 416 to 17     Submitted on the opposite strand 400/416
(96 %)
0 diff
(100 %id)
BP421318 small intestine .f 795 to 1158 1 to 365     Submitted on the opposite strand 365/369
(98 %)
2 diff
(99.5 %id)
AI672239 Kidney .f 797 to 1149 362 to 10       353/362
(97 %)
0 diff
(100 %id)
BF032543 adenocarcinoma, ovary .f 803 to 1158 1 to 354       354/361
(98 %)
9 diff
(97.6 %id)
AI873561 lymph node, lymphoma, follicular mixed small and largecell .f 812 to 1157 348 to 5       344/352
(97 %)
0 diff
(100 %id)
H95558 liver and spleen .f 813 to 1152 341 to 1       341/341
(100 %)
1 diff
(99.8 %id)
AW022928 cochlea, ear .f 814 to 1117 1 to 304       304/304
(100 %)
6 diff
(98.1 %id)
AW022924 cochlea, ear .f 820 to 1158 1 to 339   AAA   339/339
(100 %)
0 diff
(100 %id)
R68429.
matches multiple genes
placenta .f 834 to 1152 322 to 3     also hits gene vordor 320/322
(99 %)
0 diff
(100 %id)
CN349816 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .f 843 to 1159 327 to 11   AAA Submitted on the opposite strand 317/317
(100 %)
5 diff
(98.5 %id)
BU753344 placenta .f 844 to 1158 332 to 18   AAA   315/315
(100 %)
0 diff
(100 %id)
CA777207 Pancreas, Purified pancreatic islet .f 865 to 1157 333 to 41   AAA Submitted on the opposite strand 293/293
(100 %)
3 diff
(99.0 %id)
BX368979 Neuroblastoma Cot 10-normalized .f 896 to 1158 1 to 260       260/267
(97 %)
6 diff
(97.8 %id)
BU164452 epithelioid carcinoma, Pancreas .f 903 to 1158 12 to 267   AAA   256/267
(95 %)
6 diff
(97.8 %id)
CN349826 embryonic stem cells, cell lines H1, H7, andH9 .f 948 to 1161 236 to 23     Submitted on the opposite strand 214/236
(90 %)
0 diff
(100 %id)
T31529 colon, embryo .f 977 to 1158 1 to 182       182/182
(100 %)
0 diff
(100 %id)
T16670   .f 999 to 1158 159 to 1       159/165
(96 %)
0 diff
(100 %id)
BM012635 brain, neuroblastoma, cell line .g 1 to 673 1 to 682   tiling clone,   682/686
(99 %)
16 diff
(97.7 %id)
TI_59381857   .g 2 to 673 102 to 782       681/685
(99 %)
16 diff
(97.7 %id)
AK094410 cerebellum .g 478 to 2654 1 to 2178 exact tiling clone, available from FLJ,   2178/2178
(100 %)
2 diff
(100.0 %id)
DA067757 cerebellum .g 479 to 977 2 to 500   capped   499/499
(100 %)
0 diff
(100 %id)
BY798576 eye .g 782 to 1166 1 to 385       385/385
(100 %)
0 diff
(100 %id)
DB297363 cerebellum .g 2118 to 2654 538 to 1   tiling clone,   538/538
(100 %)
1 diff
(99.9 %id)
BX282487 brain .h 41 to 554 1 to 514       514/514
(100 %)
1 diff
(99.9 %id)
BI916757 brain .h 41 to 806 1 to 769   tiling clone,   769/769
(100 %)
7 diff
(99.1 %id)
TI_57240260   .h 41 to 806 31 to 799       769/799
(96 %)
12 diff
(98.5 %id)
BG717186 testis .h 297 to 972 6 to 681 exact tiling clone,   676/681
(99 %)
6 diff
(99.2 %id)
AA427371.
matches multiple genes
ovarian tumor, ovary .h 402 to 450 437 to 485     also hits gene vordor 475/488
(97 %)
8 diff
(98.4 %id)
BP429796   .i 1 to 339 1 to 339   tiling clone,   342/342
(100 %)
5 diff
(98.6 %id)
BF896290 marrow .i 300 to 631 32 to 363   tiling clone,   332/363
(91 %)
6 diff
(98.4 %id)
DA584783 lung .j 1 to 589 2 to 590 exact tiling clone, capped   589/589
(100 %)
0 diff
(100 %id)
AI334312 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .j 89 to 435 1 to 347     Submitted on the opposite strand 347/347
(100 %)
0 diff
(100 %id)
CN349819 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .k 1 to 699 1 to 699   tiling clone,   699/699
(100 %)
0 diff
(100 %id)
DB104864 thymus .k 55 to 622 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
CD368915 Alveolar Macrophage, lung .k 622 to 1309 706 to 19 exact tiling clone, AAA   688/688
(100 %)
0 diff
(100 %id)
BF684881 leiomyosarcoma cell line, uterus .k 673 to 1137 1 to 465 exact AAA   465/465
(100 %)
3 diff
(99.4 %id)
BF686154 leiomyosarcoma cell line, uterus .k 673 to 1137 1 to 466 K77Q AAA   466/466
(100 %)
3 diff
(99.4 %id)
BI254783 cervical carcinoma cell line, cervix .l 1 to 777 1 to 774 K61E P62A N63Q A64R G65R ... tiling clone,   774/911
(84 %)
19 diff
(98.0 %id)
AK097659 testis .m 1 to 1878 2 to 1880 exact tiling clone, available from FLJ,   1880/1880
(100 %)
1 diff
(100.0 %id)
DB044662 testis .m 1 to 555 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
BI820165 pooled brain, lung, testis .m 455 to 830 379 to 2     Submitted on the opposite strand 378/380
(99 %)
13 diff
(96.6 %id)
N91825 lung .m 456 to 657 10 to 212     Submitted on the opposite strand 203/212
(95 %)
8 diff
(96.3 %id)
AA382903 testis .m 462 to 699 1 to 238       238/238
(100 %)
0 diff
(100 %id)
BF030520 hypernephroma, Kidney .m 514 to 1049 1 to 533       533/895
(59 %)
16 diff
(98.3 %id)
R34277 placenta .m 538 to 682 1 to 147     Submitted on the opposite strand 147/147
(100 %)
2 diff
(98.7 %id)
N79024 lung .m 609 to 708 1 to 100     Submitted on the opposite strand 100/100
(100 %)
0 diff
(100 %id)
CN349823 embryonic stem cells, cell lines H1, H7, andH9 .m 867 to 1027 1 to 162       162/162
(100 %)
5 diff
(97.0 %id)
BF755446 colon .m 900 to 1069 178 to 9     Submitted on the opposite strand 170/178
(95 %)
1 diff
(99.5 %id)
BF756496 colon .m 900 to 1069 178 to 9     Submitted on the opposite strand 170/178
(95 %)
1 diff
(99.5 %id)
CN275435 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .m 1032 to 1694 1 to 663       663/663
(100 %)
0 diff
(100 %id)
N78350 multiple sclerosis lesions .m 1036 to 1601 565 to 3     Submitted on the opposite strand 563/574
(98 %)
0 diff
(100 %id)
AM413005   .m 1099 to 1221 1 to 123       123/123
(100 %)
0 diff
(100 %id)
DB338105 testis .m 1461 to 1878 419 to 1   tiling clone,   419/427
(98 %)
2 diff
(99.6 %id)
AI654683 pooled germ cell tumors .n 1 to 512 1 to 512 exact   Submitted on the opposite strand 512/512
(100 %)
3 diff
(99.5 %id)
AI655203 pooled germ cell tumors .n 1 to 529 1 to 529 exact tiling clone, Submitted on the opposite strand 529/529
(100 %)
0 diff
(100 %id)
BF592854 pooled germ cell tumors .n 19 to 529 1 to 511     Submitted on the opposite strand 511/511
(100 %)
0 diff
(100 %id)
BF171289 blood .o-u 1 to 460 1 to 459 R2A A21S R29Q A31L Y32M ... tiling clone,   459/460
(99 %)
9 diff
(98.1 %id)
AK300927 small intestine Gene RANBP1, variant not shown         Suspected internal deletion, this clone was ignored    
AV645996 corresponding non cancerous liver tissue Gene RANBP1, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
R35477 placenta Gene RANBP1, variant not shown         Submitted on the opposite strand    
AA931125 pooled germ cell tumors Gene RANBP1, variant not shown         Suspected internal deletion, this clone was ignored    
AW291475   Gene RANBP1, variant not shown         Suspected internal deletion, this clone was ignored    
CU013156 Synthetic constructs Gene RANBP1, variant not shown         Suspected internal deletion, this clone was ignored    
DC388255 small intestine Gene RANBP1, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI