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Gene RAMP1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
131 supporting clones for gene RAMP1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AI752092 Bone, Hip .a 1 to 354 9 to 362   tiling clone,   354/362
(97 %)
6 diff
(98.4 %id)
BF206141 brain, neuroblastoma .a 120 to 969 1 to 861   tiling clone,   861/1026
(83 %)
38 diff
(96.3 %id)
BF315031 brain, neuroblastoma .a 120 to 862 1 to 730   tiling clone,   730/769
(94 %)
8 diff
(99.0 %id)
BG938514 Bone, Hip .a 159 to 748 1 to 590       590/590
(100 %)
5 diff
(99.2 %id)
AI017108 pooled .b 1 to 433 1 to 433     Submitted on the opposite strand 433/433
(100 %)
0 diff
(100 %id)
AI884911 anaplastic oligodendroglioma, brain .b 1 to 576 1 to 576   tiling clone, Submitted on the opposite strand 576/576
(100 %)
0 diff
(100 %id)
NM_005855.2   .b 1 to 907 1 to 907 exact RefSeq, AAA   907/907
(100 %)
0 diff
(100 %id)
AI356143 brain, glioblastoma (pooled) .b 19 to 483 1 to 465     Submitted on the opposite strand 465/465
(100 %)
2 diff
(99.6 %id)
AI370983 lung .b 19 to 492 1 to 474     Submitted on the opposite strand 474/474
(100 %)
0 diff
(100 %id)
BG708293 brain, hypothalamus .b 75 to 723 1 to 649       649/649
(100 %)
6 diff
(99.1 %id)
DB488709 hypothalamus .b 80 to 548 1 to 473       473/473
(100 %)
20 diff
(95.8 %id)
DB491216 hypothalamus .b 80 to 474 1 to 397       397/397
(100 %)
7 diff
(98.3 %id)
TI_57146772   .b 85 to 782 23 to 724       702/724
(96 %)
22 diff
(97.0 %id)
DR005531 Prostate .b 86 to 692 1 to 607       607/607
(100 %)
6 diff
(99.1 %id)
TI_149312603   .b 86 to 907 912 to 96   AAA   817/948
(86 %)
19 diff
(98.0 %id)
TI_57147774   .b 89 to 832 29 to 772       744/772
(96 %)
7 diff
(99.1 %id)
BE262882 brain, neuroblastoma .b 92 to 614 16 to 529       514/529
(97 %)
8 diff
(98.5 %id)
TI_57167029   .b 92 to 903 32 to 853       822/930
(88 %)
27 diff
(97.1 %id)
BF206169 brain, neuroblastoma .b 94 to 858 1 to 769   AAA   769/807
(95 %)
21 diff
(97.4 %id)
BI760643 pooled colon, kidney, stomach .b 94 to 832 1 to 738       738/738
(100 %)
1 diff
(99.9 %id)
BI761085 pooled colon, kidney, stomach .b 95 to 782 1 to 693       693/693
(100 %)
18 diff
(97.5 %id)
BI835154 pooled pancreas and spleen .b 97 to 903 1 to 817       817/842
(97 %)
23 diff
(97.3 %id)
CR621253 Neuroblastoma Cot 25-normalized .b 98 to 913 1 to 816   tiling clone,   816/816
(100 %)
0 diff
(100 %id)
BI765600 pooled colon, kidney, stomach .b 98 to 853 27 to 783       757/789
(95 %)
16 diff
(98.0 %id)
TI_57147846   .b 98 to 853 27 to 783       757/789
(95 %)
16 diff
(98.0 %id)
AL524407 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .b 99 to 909 1 to 809       809/809
(100 %)
4 diff
(99.6 %id)
BQ071673 brain, neuroblastoma, cell line .b 100 to 900 1 to 802   AAA   802/802
(100 %)
1 diff
(99.9 %id)
AJ001014   .b 101 to 900 1 to 800       800/800
(100 %)
0 diff
(100 %id)
BI755566 brain .b 101 to 909 1 to 820       820/848
(96 %)
29 diff
(96.6 %id)
TI_57218728   .b 101 to 909 36 to 855       820/930
(88 %)
34 diff
(96.4 %id)
AA298054   .b 104 to 384 1 to 281       281/281
(100 %)
1 diff
(99.7 %id)
BG519813 brain, neuroblastoma .b 108 to 910 1 to 801       801/807
(99 %)
12 diff
(98.6 %id)
BF310160 brain, neuroblastoma .b 108 to 768 1 to 652       652/879
(74 %)
15 diff
(98.3 %id)
BF316993 brain, neuroblastoma .b 108 to 833 1 to 707       707/883
(80 %)
47 diff
(94.7 %id)
BM842173 lymph node, stomach .b 108 to 586 1 to 478       478/478
(100 %)
1 diff
(99.8 %id)
BC000548 Brain, neuroblastoma .b 109 to 906 1 to 798   available from MGC, AAA   798/798
(100 %)
1 diff
(99.9 %id)
BX103199 brain, pineal gland .b 109 to 467 1 to 362       362/362
(100 %)
3 diff
(99.2 %id)
BE262513 brain, neuroblastoma .b 109 to 761 26 to 683       658/688
(95 %)
18 diff
(97.4 %id)
BE313025 brain, neuroblastoma .b 116 to 707 1 to 595       595/595
(100 %)
5 diff
(99.2 %id)
BE382425 brain, neuroblastoma .b 116 to 759 1 to 642       642/666
(96 %)
3 diff
(99.6 %id)
AA302975 NULL, omentum .b 121 to 451 1 to 331       331/331
(100 %)
2 diff
(99.4 %id)
BI962563 Islets of Langerhans, Pancreas .b 121 to 623 1 to 503       503/503
(100 %)
1 diff
(99.9 %id)
BG820924 anaplastic oligodendroglioma with 1p/19qloss, brain .b 122 to 903 1 to 779       779/784
(99 %)
10 diff
(98.8 %id)
DB498071 hypothalamus .b 123 to 632 1 to 510       510/510
(100 %)
2 diff
(99.7 %id)
BE260466 brain, neuroblastoma .b 125 to 821 1 to 686       686/770
(89 %)
16 diff
(98.0 %id)
BI199364 brain, neuroblastoma .b 125 to 840 1 to 714       714/783
(91 %)
19 diff
(97.6 %id)
BE314566 brain, neuroblastoma .b 126 to 831 22 to 739       713/742
(96 %)
41 diff
(94.5 %id)
BE312754 brain, neuroblastoma .b 129 to 866 1 to 740       740/769
(96 %)
22 diff
(97.2 %id)
CO960521 mixed .b 131 to 579 1 to 449       449/449
(100 %)
1 diff
(99.8 %id)
AY265457 lung .b 133 to 579 1 to 447       447/447
(100 %)
0 diff
(100 %id)
CR542032   .b 133 to 579 1 to 447       447/447
(100 %)
0 diff
(100 %id)
CR542044   .b 133 to 576 1 to 444       444/444
(100 %)
0 diff
(100 %id)
CV029257 mixed .b 133 to 578 1 to 446       446/617
(72 %)
1 diff
(99.9 %id)
BE312374 brain, neuroblastoma .b 146 to 793 1 to 645       645/652
(98 %)
9 diff
(98.7 %id)
BE260481 brain, neuroblastoma .b 147 to 902 1 to 754   AAA   754/754
(100 %)
34 diff
(95.5 %id)
CK822019 Pancreas, Purified pancreatic islet .b 147 to 728 1 to 582     Submitted on the opposite strand 582/582
(100 %)
0 diff
(100 %id)
BE383331 brain, neuroblastoma .b 155 to 454 1 to 300       300/300
(100 %)
0 diff
(100 %id)
AA063091 pineal gland .b 185 to 471 1 to 287       287/287
(100 %)
6 diff
(98.0 %id)
BE261967 brain, neuroblastoma .b 187 to 890 1 to 696       696/722
(96 %)
13 diff
(98.2 %id)
TI_149292777   .b 192 to 900 785 to 78   AAA   708/708
(100 %)
1 diff
(99.9 %id)
BM795108 stomach .b 194 to 756 1 to 563       563/563
(100 %)
0 diff
(100 %id)
BM852521 stomach .b 194 to 588 1 to 395       395/395
(100 %)
1 diff
(99.8 %id)
BM126392 Islets of Langerhans, Pancreas .b 195 to 542 1 to 348   fully sequenced,   348/348
(100 %)
2 diff
(99.5 %id)
AA054483 uterus .b 198 to 439 1 to 240   fully sequenced,   240/240
(100 %)
2 diff
(99.2 %id)
BM978161 lung .b 230 to 907 696 to 19   AAA   678/680
(99 %)
1 diff
(99.9 %id)
BM974755 lung .b 253 to 900 666 to 19   AAA   648/648
(100 %)
0 diff
(100 %id)
AI923523 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 262 to 654 392 to 1       392/392
(100 %)
9 diff
(97.8 %id)
CA776338 Pancreas, Purified pancreatic islet .b 286 to 906 621 to 1       621/621
(100 %)
0 diff
(100 %id)
BM313444 Pancreas, Purified pancreatic islet .b 304 to 906 603 to 1       603/603
(100 %)
0 diff
(100 %id)
AI951585 fibrotheoma, ovary .b 321 to 901 581 to 1       581/592
(98 %)
5 diff
(99.2 %id)
CK822020 Pancreas, Purified pancreatic islet .b 323 to 906 603 to 19   AAA Submitted on the opposite strand 585/604
(96 %)
8 diff
(98.7 %id)
TI_157609606   .b 351 to 900 659 to 109   AAA   551/551
(100 %)
7 diff
(98.8 %id)
TI_154016557   .b 352 to 910 701 to 144   AAA   558/1095
(50 %)
38 diff
(96.6 %id)
AI937664 anaplastic oligodendroglioma, brain .b 371 to 896 552 to 27   AAA   526/533
(98 %)
9 diff
(98.4 %id)
BE382507 brain, neuroblastoma .b 382 to 910 1 to 529       529/535
(98 %)
1 diff
(99.9 %id)
AA058520 uterus .b 409 to 900 493 to 1   fully sequenced,   493/493
(100 %)
9 diff
(98.2 %id)
BE880924 large cell carcinoma, undifferentiated, lung .b 419 to 900 1 to 482   AAA   482/482
(100 %)
1 diff
(99.8 %id)
AI151032 brain, glioblastoma (pooled) .b 427 to 900 474 to 1       474/474
(100 %)
0 diff
(100 %id)
BG938515 Bone, Hip .b 443 to 888 446 to 1       446/446
(100 %)
1 diff
(99.8 %id)
DB569166 hypothalamus .b 447 to 910 1 to 464     Submitted on the opposite strand 464/468
(99 %)
4 diff
(99.2 %id)
BQ011783 placenta .b 452 to 900 467 to 19   AAA   449/449
(100 %)
1 diff
(99.8 %id)
AA530988 normal prostate, Prostate .b 459 to 901 441 to 1       441/441
(100 %)
4 diff
(99.1 %id)
W16467 lung .b 468 to 900 424 to 1     Submitted on the opposite strand 424/505
(83 %)
17 diff
(96.7 %id)
DB537860 hippocampus .b 470 to 900 1 to 431     Submitted on the opposite strand 431/431
(100 %)
4 diff
(99.1 %id)
AA639653 colon, colon tumor RER+ .b 470 to 901 431 to 1       431/431
(100 %)
2 diff
(99.6 %id)
CF529943 placenta .b 470 to 900 449 to 19   AAA   431/431
(100 %)
0 diff
(100 %id)
DB558069 hypothalamus .b 472 to 907 1 to 435     Submitted on the opposite strand 435/435
(100 %)
1 diff
(99.8 %id)
AA971974 pooled .b 473 to 900 440 to 14   AAA   427/427
(100 %)
1 diff
(99.8 %id)
AA063645 pineal gland .b 475 to 900 425 to 1       425/425
(100 %)
1 diff
(99.8 %id)
DB561658 hypothalamus .b 483 to 900 1 to 418     Submitted on the opposite strand 418/418
(100 %)
4 diff
(99.1 %id)
AI076879 brain, glioblastoma (pooled) .b 483 to 902 420 to 1       420/420
(100 %)
0 diff
(100 %id)
BM126103 Islets of Langerhans, Pancreas .b 512 to 907 411 to 16   fully sequenced, AAA   396/396
(100 %)
5 diff
(98.8 %id)
AI159955 heart .b 513 to 902 394 to 5       390/394
(98 %)
0 diff
(100 %id)
F34331 pectoral muscle (after mastectomy) .b 513 to 902 1 to 390       390/390
(100 %)
3 diff
(99.3 %id)
AJ346365 pectoral muscle (after mastectomy) .b 515 to 895 1 to 381       381/381
(100 %)
0 diff
(100 %id)
AJ346670 pectoral muscle (after mastectomy) .b 515 to 902 1 to 388       388/389
(99 %)
1 diff
(99.8 %id)
BF001396 colon, colon tumor, RER+ .b 526 to 899 374 to 1       374/376
(99 %)
0 diff
(100 %id)
EL949174 eyeball .b 529 to 900 41 to 408   AAA   368/408
(90 %)
7 diff
(98.3 %id)
BE673246 Prostate .b 529 to 910 382 to 1       382/382
(100 %)
10 diff
(97.4 %id)
BM994494 lung, Metastatic Chondrosarcoma .b 548 to 900 371 to 19   AAA   353/353
(100 %)
8 diff
(97.8 %id)
W16468 lung .b 553 to 900 340 to 1     Submitted on the opposite strand 340/360
(94 %)
11 diff
(97.0 %id)
AI244379 Kidney .b 557 to 906 350 to 1       350/350
(100 %)
0 diff
(100 %id)
H40103 brain .b 559 to 884 328 to 1       328/328
(100 %)
2 diff
(99.4 %id)
CA437279 lung, Metastatic Chondrosarcoma .b 565 to 900 354 to 19   AAA   336/336
(100 %)
3 diff
(99.2 %id)
AJ572368 pectoral muscle (after mastectomy) .b 578 to 875 1 to 297       297/297
(100 %)
4 diff
(98.7 %id)
AA877816 colon, colon tumor RER+ .b 579 to 885 1 to 305     Submitted on the opposite strand 305/313
(97 %)
7 diff
(97.8 %id)
AI862417 colon, colon tumor, RER+ .b 581 to 901 322 to 1       322/322
(100 %)
2 diff
(99.4 %id)
AI016925   .b 585 to 909 325 to 1       325/325
(100 %)
1 diff
(99.7 %id)
F36819 pectoral muscle (after mastectomy) .b 599 to 711 1 to 112       112/112
(100 %)
9 diff
(92.0 %id)
F27329 pectoral muscle (after mastectomy) .b 601 to 892 1 to 292       292/292
(100 %)
3 diff
(99.0 %id)
AI471053 brain, glioblastoma (pooled) .b 613 to 907 296 to 1       296/296
(100 %)
1 diff
(99.7 %id)
AI418029 Prostate .b 616 to 907 292 to 1       292/292
(100 %)
0 diff
(100 %id)
F22757 pectoral muscle (after mastectomy) .b 617 to 906 1 to 290       290/291
(99 %)
1 diff
(99.7 %id)
AA133215 uterus .b 627 to 900 273 to 1       273/274
(99 %)
1 diff
(99.7 %id)
AA587382 colon, colon tumor RER+ .b 629 to 899 271 to 1       271/271
(100 %)
0 diff
(100 %id)
AA636016 normal prostate, Prostate .b 648 to 907 259 to 1       259/259
(100 %)
2 diff
(99.3 %id)
AI672222 Kidney .b 648 to 910 266 to 4       263/266
(98 %)
0 diff
(100 %id)
AA662265 normal prostate, Prostate .b 649 to 895 247 to 1       247/247
(100 %)
5 diff
(98.0 %id)
AJ574173 pectoral muscle (after mastectomy) .b 654 to 910 1 to 257       257/262
(98 %)
6 diff
(97.8 %id)
BE348874 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .b 668 to 910 243 to 1       243/243
(100 %)
6 diff
(97.6 %id)
AW135729   .b 690 to 907 235 to 18   AAA   218/228
(95 %)
0 diff
(100 %id)
AI350858 pooled germ cell tumors .b 706 to 906 202 to 2       201/202
(99 %)
0 diff
(100 %id)
AW797959 uterus .b 773 to 894 126 to 5       122/127
(96 %)
0 diff
(100 %id)
EC538039 Prostate .b 797 to 902 1 to 107       107/107
(100 %)
2 diff
(98.2 %id)
BX327017 Neuroblastoma Cot 25-normalized .b 802 to 913 1 to 110       110/117
(94 %)
6 diff
(94.9 %id)
EC489688 Prostate .b 806 to 910 104 to 1       104/113
(92 %)
2 diff
(98.3 %id)
BE877621 large cell carcinoma, undifferentiated, lung .c 1 to 671 1 to 668 exact tiling clone,   668/668
(100 %)
4 diff
(99.5 %id)
BI548986 brain, hippocampus .d 1 to 739 1 to 738 exact tiling clone,   738/738
(100 %)
4 diff
(99.5 %id)
TI_44166626   .d 2 to 739 82 to 818 exact     737/818
(90 %)
7 diff
(99.2 %id)
BG206083   Gene RAMP1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
CB054168 brain, glioblastoma (pooled) Gene RAMP1, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
BE974148 Prostate Gene RAMP1, variant not shown         This clone was ignored    
BE974501 Prostate Gene RAMP1, variant not shown         This clone was ignored    
BF310582 brain, neuroblastoma Gene RAMP1, variant not shown         This clone was ignored    
BI199476 brain, neuroblastoma Gene RAMP1, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI