To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene RALGAPA2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
350 supporting clones for gene RALGAPA2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
Z19195 leg muscle, skeletal muscle .b 6785 to 7096 316 to 1       316/333
(94 %)
5 diff
(98.5 %id)
Z28438 leg muscle, skeletal muscle .b 6428 to 6654 1 to 226       226/226
(100 %)
3 diff
(98.7 %id)
AA781131   .i-u 705 to 1202 497 to 1 exact     497/497
(100 %)
1 diff
(99.8 %id)
AA301980 aorta .b 7785 to 8080 19 to 314       296/314
(94 %)
6 diff
(98.1 %id)
AA329960   .a 1517 to 1846 1 to 331       331/333
(99 %)
2 diff
(99.4 %id)
AA332525 Embryo, 8 weeks .b 6282 to 6607 1 to 329       329/329
(100 %)
5 diff
(98.5 %id)
AA345441 gall bladder .b 7956 to 8245 1 to 290       290/291
(99 %)
2 diff
(99.4 %id)
AA367921 placenta .b 6324 to 6729 1 to 403       403/403
(100 %)
8 diff
(98.1 %id)
AB033098 brain .a 2594 to 5650 1 to 3057   tiling clone, available from KIAA,   3057/3902
(78 %)
2 diff
(100.0 %id)
AJ711405 heart .b 6813 to 7249 444 to 10     Submitted on the opposite strand 435/444
(97 %)
7 diff
(98.5 %id)
AK002211 placenta .b 1 to 5671 2 to 5672 Q255R S299F F365S S490R D499Y ... tiling clone, available from FLJ,   5672/5672
(100 %)
13 diff
(99.8 %id)
AK022881   .d 3082 to 5200 1 to 2119   tiling clone, available from FLJ,   2119/2119
(100 %)
0 diff
(100 %id)
AK026194 human small intestine .b 6592 to 7999 1 to 1408   available from FLJ, AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 1408/1408
(100 %)
3 diff
(99.8 %id)
AK127228 hippocampus .d 1 to 4004 2 to 4005 exact tiling clone, available from FLJ,   4005/4005
(100 %)
3 diff
(100.0 %id)
AK309650 ovary .a 422 to 2165 571 to 2317       1750/2317
(75 %)
6 diff
(99.8 %id)
AL731902 breast .a 207 to 430 1 to 223       223/435
(51 %)
6 diff
(98.7 %id)
AL731917 breast .e 1 to 396 43 to 440   tiling clone,   398/450
(88 %)
13 diff
(97.2 %id)
AL731918 breast .e 16 to 380 362 to 1   tiling clone,   362/418
(86 %)
3 diff
(99.3 %id)
AL731919 breast .e 300 to 924 1 to 622   tiling clone, AAA   622/622
(100 %)
4 diff
(99.4 %id)
AL731920 breast .m-u 1 to 416 444 to 31 T2A tiling clone,   414/452
(91 %)
0 diff
(100 %id)
AL731921 breast .m-u 80 to 416 1 to 336   tiling clone,   336/362
(92 %)
1 diff
(99.8 %id)
AL731993 breast .a 5560 to 6011 1 to 453       453/454
(99 %)
6 diff
(98.7 %id)
AL731994 breast .a 5565 to 5964 400 to 1       400/406
(98 %)
3 diff
(99.3 %id)
AL844313 breast .a 193 to 700 1 to 507       507/520
(97 %)
6 diff
(98.9 %id)
AL844314 breast .a 161 to 675 518 to 1       518/535
(96 %)
9 diff
(98.4 %id)
AL844315 breast .a 272 to 675 402 to 1       402/415
(96 %)
7 diff
(98.4 %id)
AL844317 breast .a 604 to 1264 1 to 661       661/661
(100 %)
0 diff
(100 %id)
AL844318 breast .a 614 to 1284 670 to 1       670/670
(100 %)
1 diff
(99.9 %id)
AL844433 stomach .a 443 to 1019 581 to 3       579/581
(99 %)
3 diff
(99.5 %id)
AL844434 stomach .a 263 to 707 22 to 467       447/469
(95 %)
12 diff
(97.5 %id)
AL844436 stomach .a 263 to 711 36 to 485       450/485
(92 %)
6 diff
(98.8 %id)
AW062956 stomach .a 2436 to 2871 1 to 436       436/436
(100 %)
1 diff
(99.8 %id)
AW364317 denis_drash .b 6178 to 6694 6 to 519       514/519
(99 %)
6 diff
(98.9 %id)
AW367636 head_neck .b 6655 to 6943 10 to 299       290/299
(96 %)
7 diff
(97.7 %id)
AW367666 head_neck .b 6655 to 6943 10 to 299       290/299
(96 %)
7 diff
(97.7 %id)
AW371719 breast .h 37 to 351 1 to 315       315/315
(100 %)
10 diff
(96.9 %id)
AW604552 colon .a 5175 to 5656 1 to 481       481/614
(78 %)
8 diff
(98.7 %id)
AW607280 head_neck .a 4117 to 4380 278 to 7       270/278
(97 %)
7 diff
(97.5 %id)
AW753998 colon .a 5175 to 5656 1 to 481       481/614
(78 %)
8 diff
(98.7 %id)
AW814577 stomach .b 5520 to 5931 15 to 428       414/428
(96 %)
6 diff
(98.6 %id)
AW814938 stomach .b 5563 to 5860 1 to 297       297/297
(100 %)
16 diff
(94.7 %id)
AW850810 colon .a 2621 to 3224 10 to 613       604/613
(98 %)
0 diff
(100 %id)
AW939924 denis_drash .b 4948 to 5245 301 to 7     Submitted on the opposite strand 295/301
(98 %)
0 diff
(100 %id)
AW952619   .b 6875 to 7225 1 to 350       350/351
(99 %)
5 diff
(98.6 %id)
AW963242   .b 7981 to 8326 1 to 346   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 346/346
(100 %)
0 diff
(100 %id)
AW993496 breast_normal .b 6071 to 6595 567 to 42   tiling clone, Submitted on the opposite strand 526/567
(92 %)
0 diff
(100 %id)
AY007097   .b 6322 to 8254 1 to 1932   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 1932/1932
(100 %)
3 diff
(99.9 %id)
AY007156   .b 6322 to 8254 1 to 1933   tiling clone, AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 1933/1933
(100 %)
1 diff
(100.0 %id)
F00317 leg muscle, skeletal muscle .b 7171 to 7341 1 to 171       171/172
(99 %)
1 diff
(99.5 %id)
Z25273 leg muscle, skeletal muscle .b 7172 to 7341 171 to 2       170/172
(98 %)
0 diff
(100 %id)
AU185457 skin .a 5211 to 5358 148 to 1       148/148
(100 %)
0 diff
(100 %id)
TI_2194698620   .a 4770 to 5837 1161 to 95     Submitted on the opposite strand 1067/1271
(83 %)
19 diff
(98.6 %id)
TI_2194698632   .c 65 to 1095 108 to 1145     Submitted on the opposite strand 1038/1307
(79 %)
27 diff
(98.0 %id)
TI_2194698884   .c 913 to 1906 1023 to 32       992/1262
(78 %)
5 diff
(99.7 %id)
TI_2194698886   .c 65 to 703 656 to 18       639/1276
(50 %)
1 diff
(100.0 %id)
TI_2194698890   .c 65 to 527 475 to 13       463/1298
(35 %)
0 diff
(100 %id)
TI_2194698892   .a 2353 to 3410 1062 to 10       1053/1279
(82 %)
5 diff
(99.7 %id)
TI_2194698894   .a 4443 to 5533 1116 to 37   tiling clone,   1080/1267
(85 %)
24 diff
(98.2 %id)
TI_2194698896   .c 1685 to 2715 1042 to 15       1028/1255
(81 %)
3 diff
(99.8 %id)
TI_2194698897   .a 4311 to 5358 1048 to 4       1045/1301
(80 %)
9 diff
(99.4 %id)
TI_2194698898   .a 3652 to 4715 1059 to 4       1056/1272
(83 %)
8 diff
(99.4 %id)
TI_2194698899   .a 527 to 1560 1031 to 4       1028/1264
(81 %)
3 diff
(99.8 %id)
TI_2194698901   .c 732 to 1799 1080 to 15       1066/1327
(80 %)
9 diff
(99.4 %id)
TI_2194698909   .a 4054 to 5085 1052 to 21       1032/1271
(81 %)
1 diff
(100.0 %id)
TI_2194698928   .a 3443 to 4388 951 to 8       944/1227
(76 %)
2 diff
(99.9 %id)
TI_2194698929   .c 1880 to 2890 1014 to 7       1008/1282
(78 %)
3 diff
(99.8 %id)
TI_2194698931   .a 3327 to 4601 1254 to 4       1251/1320
(94 %)
22 diff
(98.4 %id)
TI_2194698932   .c 1313 to 2314 1007 to 10       998/1275
(78 %)
3 diff
(99.8 %id)
TI_2194698933   .c 65 to 1032 981 to 15       967/1271
(76 %)
5 diff
(99.7 %id)
TI_2194698935   .a 2636 to 3795 1149 to 5       1145/1270
(90 %)
12 diff
(99.1 %id)
TI_2194698936   .a 2926 to 4059 1155 to 31       1125/1324
(84 %)
14 diff
(99.0 %id)
TI_2194698937   .c 2074 to 3152 1076 to 5       1072/1268
(84 %)
7 diff
(99.5 %id)
TI_2194699285   .a 4762 to 5837 1153 to 92     Submitted on the opposite strand 1062/1251
(84 %)
19 diff
(98.5 %id)
TI_2194699665   .c 65 to 1089 108 to 1127     Submitted on the opposite strand 1020/1288
(79 %)
18 diff
(98.7 %id)
BE162817 head_neck .b 5072 to 5231 160 to 1     Submitted on the opposite strand 160/160
(100 %)
0 diff
(100 %id)
BE180655 head_neck .a 5272 to 5557 1 to 287       287/287
(100 %)
8 diff
(97.3 %id)
BE180656 head_neck .a 5182 to 5564 1 to 383       383/383
(100 %)
4 diff
(99.0 %id)
BE697852 colon .b 7222 to 7732 510 to 2       509/510
(99 %)
0 diff
(100 %id)
BE768213 prostate_tumor .j-u 1 to 483 4 to 484 N2S E11* tiling clone,   481/484
(99 %)
23 diff
(95.3 %id)
BE768242 prostate_tumor .b 4647 to 4881 244 to 9       236/244
(96 %)
0 diff
(100 %id)
BE939833 uterus_tumor .a 4846 to 5179 28 to 360       333/360
(92 %)
9 diff
(97.5 %id)
BF349673 head_neck .d 4345 to 4953 616 to 7       610/624
(97 %)
0 diff
(100 %id)
BF354103 head_neck .a 2362 to 2500 141 to 3       139/141
(98 %)
0 diff
(100 %id)
BF373031 prostate_tumor .a 4600 to 4796 207 to 11       197/207
(95 %)
0 diff
(100 %id)
BF373048 prostate_tumor .a 4775 to 5052 8 to 286       279/286
(97 %)
6 diff
(98.0 %id)
BF374261 stomach_normal .a 664 to 962 311 to 14       298/318
(93 %)
2 diff
(99.4 %id)
BF375476 stomach .b 6425 to 6704 276 to 1       276/285
(96 %)
9 diff
(96.9 %id)
BF752322 breast_normal .b 8100 to 8324 1 to 223   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 223/227
(98 %)
4 diff
(98.3 %id)
BF752323 breast_normal .b 8081 to 8319 17 to 255   AAA   239/260
(91 %)
3 diff
(98.9 %id)
BF768035 colon_normal .a 2138 to 2564 436 to 8     Submitted on the opposite strand 429/436
(98 %)
2 diff
(99.6 %id)
BF817530 colon_ins .a 5343 to 5750 409 to 2     Submitted on the opposite strand 408/409
(99 %)
0 diff
(100 %id)
BF839438 head_neck .l-u 173 to 441 1 to 268   tiling clone,   268/268
(100 %)
8 diff
(97.1 %id)
BF894761 marrow .a 4300 to 4770 472 to 1     Submitted on the opposite strand 472/472
(100 %)
10 diff
(97.9 %id)
BF902670 marrow .b 5105 to 5533 433 to 7     Submitted on the opposite strand 427/436
(97 %)
0 diff
(100 %id)
BF911957 uterus_tumor .b 6898 to 7231 17 to 349       333/349
(95 %)
6 diff
(98.3 %id)
BF927302 nervous_tumor .b 5000 to 5309 1 to 311       311/311
(100 %)
2 diff
(99.4 %id)
BF961258 nervous_normal .b 6503 to 6639 11 to 145       135/145
(93 %)
6 diff
(95.9 %id)
BG000494 placenta_normal .o-u 1 to 323 329 to 5 exact tiling clone,   325/329
(98 %)
0 diff
(100 %id)
BG009248 placenta_normal .a 2892 to 3304 26 to 435       410/442
(92 %)
9 diff
(98.0 %id)
BG958212 colon .a 2798 to 3232 468 to 33       436/468
(93 %)
5 diff
(99.0 %id)
BG991577 head_neck .b 6609 to 6970 364 to 2       363/369
(98 %)
0 diff
(100 %id)
BI018809 marrow .a 4531 to 5010 508 to 29       480/508
(94 %)
0 diff
(100 %id)
BI020192 marrow .a 2090 to 2568 479 to 1       479/479
(100 %)
2 diff
(99.6 %id)
BI021319 marrow .a 3552 to 3941 1 to 390       390/391
(99 %)
5 diff
(98.8 %id)
BI021388 marrow .a 4137 to 4542 406 to 1       406/406
(100 %)
0 diff
(100 %id)
BI023678 marrow .a 2572 to 2857 1 to 288       288/288
(100 %)
12 diff
(95.9 %id)
BI032175 marrow .b 6520 to 6983 19 to 482       464/482
(96 %)
6 diff
(98.8 %id)
BM314559 Pancreas, Purified pancreatic islet .d 4422 to 4889 1 to 468       468/468
(100 %)
2 diff
(99.6 %id)
BM503777 Pancreas, Purified pancreatic islet .d 4392 to 4709 1 to 318       318/318
(100 %)
0 diff
(100 %id)
BQ335654 marrow .b 5006 to 5399 394 to 1       394/394
(100 %)
1 diff
(99.8 %id)
BQ354298 head_neck .b 7023 to 7485 473 to 8       466/473
(98 %)
0 diff
(100 %id)
BQ354353 head_neck .b 7023 to 7485 473 to 8       466/473
(98 %)
0 diff
(100 %id)
BQ365761 placenta_normal .a 1719 to 2154 1 to 434       434/437
(99 %)
11 diff
(97.5 %id)
BQ372974 prostate_tumor .a 4469 to 4603 9 to 145       137/145
(94 %)
6 diff
(95.9 %id)
BQ373015 prostate_tumor .a 3335 to 3571 236 to 1       236/265
(89 %)
9 diff
(96.7 %id)
DA285375 corpus callosum .a 4330 to 4886 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA313692 hippocampus .d 1 to 535 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
DB308631 hippocampus .d 3436 to 4004 569 to 1       569/569
(100 %)
0 diff
(100 %id)
BX109110 multiple sclerosis lesions .b 7222 to 7997 1 to 777       777/778
(99 %)
3 diff
(99.7 %id)
BX119455 liver and spleen .a 5487 to 6071 1 to 586   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 586/586
(100 %)
4 diff
(99.4 %id)
BX280380 placenta .c 1429 to 1943 515 to 1     Submitted on the opposite strand 515/515
(100 %)
0 diff
(100 %id)
CB265851 adipose .b 5436 to 5798 1 to 363       363/363
(100 %)
2 diff
(99.5 %id)
CD708914 normal nasopharynx .b 6256 to 6750 27 to 521       495/521
(95 %)
6 diff
(98.9 %id)
CN358021 embryonic stem cells, cell lines H1, H7, andH9 .a 3768 to 4361 1 to 594       594/594
(100 %)
1 diff
(99.9 %id)
DA425346 colon .b 6389 to 6893 2 to 506   capped   505/505
(100 %)
1 diff
(99.9 %id)
CR737336   .i-u 34 to 505 1 to 476       476/476
(100 %)
5 diff
(99.0 %id)
CR737478 liver and spleen .b 7331 to 7804 1 to 474       474/474
(100 %)
0 diff
(100 %id)
CV025077 mixed .a 4994 to 5635 1 to 642       642/642
(100 %)
0 diff
(100 %id)
AL691860   .b 5217 to 5634 1 to 419       419/419
(100 %)
5 diff
(98.9 %id)
AL598080   .k-u 1 to 598 1 to 598 exact tiling clone,   598/598
(100 %)
0 diff
(100 %id)
AL602389 human skeletal muscle .i-u 1 to 602 1 to 602   tiling clone,   602/602
(100 %)
4 diff
(99.4 %id)
BX504465   .a 2597 to 3058 2 to 463       462/464
(99 %)
0 diff
(100 %id)
BX496256 Liver .g 1 to 513 1 to 513 exact tiling clone,   513/514
(99 %)
1 diff
(99.9 %id)
DN918503   .a 3064 to 3746 1 to 681       681/716
(95 %)
7 diff
(99.1 %id)
DN918504   .d 3388 to 4004 617 to 1       617/617
(100 %)
0 diff
(100 %id)
DQ310704   .a 158 to 5774 1 to 5617   tiling clone,   5617/5628
(99 %)
4 diff
(100.0 %id)
DA528150 brain .l-u 1 to 557 2 to 558 exact tiling clone, capped   557/561
(99 %)
2 diff
(99.7 %id)
FN074961 breast carcinoma .a 2009 to 2099 90 to 1     Submitted on the opposite strand 90/90
(100 %)
1 diff
(98.9 %id)
FN080746 breast carcinoma .d 4811 to 4927 1 to 113       113/113
(100 %)
6 diff
(94.7 %id)
FN123470 breast carcinoma .b 7678 to 7766 89 to 1     Submitted on the opposite strand 89/89
(100 %)
0 diff
(100 %id)
FN126172 breast carcinoma .b 7722 to 7823 1 to 101       101/101
(100 %)
1 diff
(99.1 %id)
FN137457 breast carcinoma .i-u 925 to 1014 1 to 89       89/90
(98 %)
9 diff
(90.0 %id)
BY796981 eye .b 7315 to 7985 1 to 671       671/671
(100 %)
0 diff
(100 %id)
BP398662 pancreatic islet .b 7500 to 7999 1 to 500     Submitted on the opposite strand 500/500
(100 %)
0 diff
(100 %id)
DR978394 brain .b 6992 to 7196 1 to 204   AAA Submitted on the opposite strand 204/204
(100 %)
3 diff
(98.6 %id)
DR980876 placenta .b 6992 to 7238 1 to 235   AAA Submitted on the opposite strand 235/235
(100 %)
19 diff
(92.0 %id)
T85728 liver and spleen .a 5486 to 5751 1 to 269   fully sequenced,   269/269
(100 %)
0 diff
(100 %id)
T90823 liver and spleen .a 5721 to 6053 334 to 1   fully sequenced,   334/334
(100 %)
2 diff
(99.5 %id)
T78626 liver and spleen .d 4871 to 5202 339 to 1       339/542
(62 %)
8 diff
(98.6 %id)
T79109 liver and spleen .d 4139 to 4511 1 to 381       381/382
(99 %)
18 diff
(95.3 %id)
T93770 liver and spleen .b 7943 to 8247 305 to 1       305/305
(100 %)
10 diff
(96.8 %id)
R05279 liver and spleen .a 5813 to 6070 264 to 1       264/435
(60 %)
0 diff
(100 %id)
R05337 liver and spleen .a 5486 to 5656 1 to 171       171/356
(48 %)
2 diff
(99.5 %id)
R05280 liver and spleen .a 5813 to 6070 262 to 1       262/314
(83 %)
7 diff
(97.8 %id)
R05338 liver and spleen .a 5486 to 5681 1 to 196       196/197
(99 %)
1 diff
(99.5 %id)
R66488 placenta .a 1957 to 2233 279 to 1     Submitted on the opposite strand 279/397
(70 %)
6 diff
(98.5 %id)
R67324 placenta .a 1262 to 1698 1 to 441     Submitted on the opposite strand 441/475
(92 %)
13 diff
(97.3 %id)
R74001 placenta .b 7530 to 7929 1 to 407       407/409
(99 %)
8 diff
(98.1 %id)
R79150 placenta .b 7790 to 8247 1 to 468       468/471
(99 %)
15 diff
(96.9 %id)
H03379 placenta .b 7908 to 8259 362 to 1   fully sequenced,   362/362
(100 %)
3 diff
(99.2 %id)
H04071 placenta .b 7536 to 7938 1 to 411   fully sequenced,   411/411
(100 %)
7 diff
(98.3 %id)
R50288 breast .b 7532 to 7854 1 to 330       330/363
(90 %)
10 diff
(97.3 %id)
R50744 breast .b 8127 to 8323 197 to 2       196/197
(99 %)
0 diff
(100 %id)
H60837 liver and spleen .d 4839 to 5202 379 to 1       379/381
(99 %)
24 diff
(93.8 %id)
H60923 liver and spleen .d 4281 to 4665 1 to 392       392/392
(100 %)
8 diff
(98.0 %id)
H67082 liver and spleen .b 8029 to 8331 308 to 3       306/308
(99 %)
0 diff
(100 %id)
H67619 liver and spleen .b 6966 to 7391 1 to 429       429/431
(99 %)
4 diff
(99.1 %id)
H98827 melanocyte .b 8014 to 8323 312 to 1   fully sequenced,   312/312
(100 %)
9 diff
(97.2 %id)
N23552 melanocyte .b 7607 to 8034 1 to 429   fully sequenced,   429/429
(100 %)
5 diff
(98.9 %id)
N59198 multiple sclerosis lesions .b 7911 to 8326 417 to 1       417/418
(99 %)
7 diff
(98.4 %id)
N75223 multiple sclerosis lesions .b 7219 to 7665 1 to 446       446/446
(100 %)
11 diff
(97.6 %id)
N78773 lung .j-u 397 to 730 339 to 3   tiling clone, fully sequenced,   337/339
(99 %)
0 diff
(100 %id)
W07054 lung .j-u 158 to 415 1 to 260   tiling clone, fully sequenced,   260/260
(100 %)
6 diff
(97.7 %id)
W31125 lung .b 6948 to 7375 1 to 428       428/428
(100 %)
4 diff
(99.1 %id)
W32822 heart .b 7349 to 7530 1 to 180       180/191
(94 %)
3 diff
(98.5 %id)
W68564 heart .b 7847 to 8260 1 to 415       415/415
(100 %)
2 diff
(99.6 %id)
AA029462 heart .b 8006 to 8254 249 to 1   fully sequenced,   249/249
(100 %)
0 diff
(100 %id)
AA029528 heart .b 7918 to 8036 1 to 119   fully sequenced,   119/119
(100 %)
0 diff
(100 %id)
AA001892 liver and spleen .d 4787 to 5202 425 to 1       425/425
(100 %)
10 diff
(97.7 %id)
AA676920 liver and spleen .j-u 290 to 724 434 to 1       434/434
(100 %)
1 diff
(99.8 %id)
AA705525 liver and spleen .d 4820 to 5200 381 to 1       381/381
(100 %)
0 diff
(100 %id)
AA705164 liver and spleen .b 7855 to 8323 469 to 1       469/469
(100 %)
0 diff
(100 %id)
AA076439.
matches multiple genes
Pancreas .g 505 to 916 421 to 1   tiling clone, also hits gene sworker 421/429
(98 %)
10 diff
(97.7 %id)
AA235486 ovarian tumor, ovary .b 8122 to 8255 134 to 1       134/134
(100 %)
0 diff
(100 %id)
AA410692 ovarian tumor, ovary .b 6713 to 7190 1 to 478       478/478
(100 %)
1 diff
(99.8 %id)
AA412410   .h 334 to 643 10 to 319   tiling clone,   310/319
(97 %)
1 diff
(99.7 %id)
AA412411   .h 907 to 998 92 to 1   tiling clone,   92/92
(100 %)
1 diff
(99.0 %id)
AA468255   .i-u 966 to 1214 1 to 249   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 249/249
(100 %)
5 diff
(98.0 %id)
AI732726   .i-u 972 to 1214 22 to 264   tiling clone, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 243/264
(92 %)
6 diff
(97.8 %id)
AA487920 lung .b 7686 to 8004 331 to 13   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 319/319
(100 %)
0 diff
(100 %id)
AA488035 lung .b 6558 to 6900 1 to 341     Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 341/341
(100 %)
4 diff
(98.9 %id)
AA664003 lung .b 7950 to 8331 383 to 2       382/383
(99 %)
0 diff
(100 %id)
AA600150 lung, lung carcinoma .d 4896 to 5202 307 to 1       307/307
(100 %)
1 diff
(99.7 %id)
AI791348   .i-u 885 to 1199 1 to 315 exact AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 315/315
(100 %)
4 diff
(98.8 %id)
AA663646 schizophrenic brain S-11 frontal lobe .j-u 323 to 459 137 to 1       137/137
(100 %)
1 diff
(99.3 %id)
AA542831 metastatic prostate bone lesion .i-u 885 to 1200 316 to 1 S85I     316/318
(99 %)
0 diff
(100 %id)
AI732513 metastatic prostate bone lesion .i-u 885 to 1199 334 to 20 exact AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 315/316
(99 %)
4 diff
(98.8 %id)
AI791468 metastatic prostate bone lesion .i-u 885 to 1199 26 to 340 exact AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 315/340
(92 %)
6 diff
(98.3 %id)
AA576679 colon, colon tumor RER+ .b 7952 to 8255 305 to 2       304/305
(99 %)
0 diff
(100 %id)
AA603026 normal prostate, Prostate .b 8055 to 8325 272 to 2       271/272
(99 %)
0 diff
(100 %id)
AA631762 breast .b 7582 to 8001 426 to 7       420/426
(98 %)
0 diff
(100 %id)
AA813749 pooled .b 7928 to 8331 405 to 3       403/408
(98 %)
0 diff
(100 %id)
AA916930 carcinoid, lung .a 5678 to 6074 397 to 1       397/397
(100 %)
20 diff
(95.0 %id)
AI000824 breast .b 7612 to 7999 388 to 1       388/388
(100 %)
0 diff
(100 %id)
AI004461   .b 7974 to 8325 353 to 2       352/353
(99 %)
0 diff
(100 %id)
AI028369   .b 4708 to 5110 406 to 4       403/406
(99 %)
0 diff
(100 %id)
AI023710 liver and spleen .b 7874 to 8323 450 to 1       450/450
(100 %)
0 diff
(100 %id)
AI056199 liver and spleen .b 7821 to 8254 434 to 1       434/434
(100 %)
0 diff
(100 %id)
AI076459 liver and spleen .d 4844 to 5206 363 to 1       363/363
(100 %)
1 diff
(99.8 %id)
AI186031 lung .j-u 271 to 723 453 to 1   tiling clone,   453/453
(100 %)
0 diff
(100 %id)
AI150494   .p 1 to 236 238 to 3 exact tiling clone,   236/238
(99 %)
0 diff
(100 %id)
AI219086 placenta .b 7921 to 8324 404 to 1       404/404
(100 %)
0 diff
(100 %id)
AI248759 liver and spleen .b 7841 to 8323 483 to 1       483/483
(100 %)
0 diff
(100 %id)
AI279273 carcinoid, lung .b 7445 to 7999 566 to 11   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 556/556
(100 %)
8 diff
(98.6 %id)
AI279284 carcinoid, lung .b 7540 to 7999 470 to 11   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 460/460
(100 %)
8 diff
(98.3 %id)
AI373218 Kidney .b 7954 to 8323 370 to 1       370/370
(100 %)
0 diff
(100 %id)
AI376450   .b 7727 to 8328 602 to 1       602/602
(100 %)
3 diff
(99.6 %id)
AI380664 B-cell, chronic lymphotic leukemia .b 7601 to 8004 404 to 1       404/404
(100 %)
0 diff
(100 %id)
AI417278 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 7888 to 8325 440 to 3       438/440
(99 %)
0 diff
(100 %id)
AI468625 Kidney .b 7983 to 8323 351 to 11   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 341/341
(100 %)
0 diff
(100 %id)
AI433729 Kidney .b 7822 to 8326 505 to 1       505/505
(100 %)
0 diff
(100 %id)
AI457807 carcinoid, lung .b 7695 to 8005 312 to 2       311/312
(99 %)
0 diff
(100 %id)
AI801482 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .n-u 1 to 414 414 to 1 exact tiling clone,   414/414
(100 %)
0 diff
(100 %id)
AI798568 ovary, tumor, 5 pooled (see description) .b 8074 to 8353 285 to 6   tiling clone,   280/285
(98 %)
0 diff
(100 %id)
AI566624 adenocarcinoma, Pancreas .b 8023 to 8325 296 to 2       295/296
(99 %)
0 diff
(100 %id)
AI632925 carcinoid, lung .b 7655 to 8235 581 to 1       581/581
(100 %)
2 diff
(99.7 %id)
AI824472 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 8012 to 8323 335 to 24   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 312/312
(100 %)
6 diff
(98.1 %id)
AI916521 Kidney .b 7875 to 8323 459 to 11   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 449/449
(100 %)
1 diff
(99.8 %id)
AI632453 pooled germ cell tumors .b 7540 to 7999 459 to 1       459/459
(100 %)
1 diff
(99.8 %id)
AI871591 carcinoid, lung .b 7454 to 7999 556 to 11   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 546/546
(100 %)
3 diff
(99.5 %id)
AI700598 carcinoid, lung .b 7818 to 8325 508 to 1       508/508
(100 %)
0 diff
(100 %id)
AW129339 anaplastic oligodendroglioma, brain .b 7975 to 8323 357 to 16   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 342/345
(99 %)
10 diff
(97.2 %id)
AI969779 pooled germ cell tumors .b 7998 to 8327 351 to 22       330/351
(94 %)
0 diff
(100 %id)
AI989509 pooled germ cell tumors .b 8012 to 8326 315 to 1       315/315
(100 %)
0 diff
(100 %id)
AI986056 colon, colonic mucosa from 3 patients with Crohn'sdisease .b 4793 to 5110 323 to 6       318/323
(98 %)
0 diff
(100 %id)
BI496915 cochlea, ear .b 8010 to 8259 8 to 257   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 250/257
(97 %)
6 diff
(97.7 %id)
AW005442 anaplastic oligodendroglioma, brain .b 7873 to 8323 466 to 16   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 451/451
(100 %)
3 diff
(99.4 %id)
AW079565 colon, moderately differentiated adenocarcinoma .b 8146 to 8249 135 to 32   AAA   104/109
(95 %)
0 diff
(100 %id)
AW242831 Kidney .b 7865 to 8326 463 to 1       463/463
(100 %)
3 diff
(99.4 %id)
AW296194   .b 7423 to 8004 599 to 18   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 582/582
(100 %)
0 diff
(100 %id)
AW872370 carcinoid, lung .b 7197 to 7613 1 to 417     Submitted on the opposite strand 417/417
(100 %)
2 diff
(99.6 %id)
BE046797 carcinoid, lung .i-u 768 to 1217 454 to 1 exact     454/456
(99 %)
6 diff
(98.7 %id)
BU428821 lymph .b 4653 to 4995 7 to 349       343/349
(98 %)
0 diff
(100 %id)
BF512487   .b 7615 to 8004 407 to 18   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 390/390
(100 %)
1 diff
(99.8 %id)
AW503310 lymph .b 4621 to 5153 1 to 533       533/533
(100 %)
5 diff
(99.1 %id)
BF514693   .a 4519 to 5020 513 to 12   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 502/513
(97 %)
0 diff
(100 %id)
BF510221   .j-u 411 to 724 331 to 18   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 314/324
(96 %)
0 diff
(100 %id)
CF143258 lymph .b 5315 to 5765 8 to 458       451/458
(98 %)
6 diff
(98.7 %id)
CF143214 lymph .b 5315 to 5845 8 to 538       531/538
(98 %)
8 diff
(98.6 %id)
BM986996 mixed .b 8045 to 8254 228 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 210/218
(96 %)
2 diff
(99.1 %id)
BQ027978 mixed .a 98 to 427 626 to 298   AAA   329/608
(54 %)
1 diff
(99.9 %id)
BE349987 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .a 5516 to 6078 560 to 1       560/605
(92 %)
11 diff
(98.2 %id)
BE348706 carcinoid, lung .i-u 684 to 1217 534 to 1 exact tiling clone,   534/534
(100 %)
1 diff
(99.9 %id)
BE218991 carcinoid, lung .b 7517 to 8005 490 to 2       489/490
(99 %)
0 diff
(100 %id)
BE219171 carcinoid, lung .b 7508 to 8005 499 to 2       498/499
(99 %)
0 diff
(100 %id)
BE219317 carcinoid, lung .b 7702 to 8235 534 to 1       534/534
(100 %)
1 diff
(99.9 %id)
BE219600 carcinoid, lung .a 5516 to 6070 555 to 1       555/642
(86 %)
7 diff
(99.0 %id)
BE467241 carcinoid, lung .a 5429 to 6070 641 to 1       641/641
(100 %)
3 diff
(99.6 %id)
BE551300 carcinoid, lung .b 7660 to 8005 347 to 2       346/347
(99 %)
0 diff
(100 %id)
CB047763 Kidney .b 6688 to 7301 10 to 623       614/623
(98 %)
6 diff
(99.1 %id)
BE676635 B-cell, chronic lymphotic leukemia .b 7440 to 8001 568 to 7       562/568
(98 %)
0 diff
(100 %id)
BF594551 colon, colon tumor, RER+ .b 7849 to 8325 483 to 7       477/483
(98 %)
0 diff
(100 %id)
BF057776 pooled germ cell tumors .b 7541 to 7999 462 to 1       462/462
(100 %)
3 diff
(99.4 %id)
BF110518 carcinoid, lung .i-u 525 to 1217 693 to 1 exact tiling clone,   693/693
(100 %)
3 diff
(99.6 %id)
BE569061 bladder, carcinoma, cell line .b 7410 to 8098 1 to 684       684/684
(100 %)
12 diff
(98.3 %id)
BF438102 carcinoid, lung .b 7774 to 8329 556 to 1       556/556
(100 %)
1 diff
(99.9 %id)
BE892685 melanotic melanoma, skin .a 2241 to 2990 1 to 757       757/967
(78 %)
29 diff
(97.1 %id)
BF678584 Prostate .b 4831 to 4915 1 to 85       85/106
(80 %)
10 diff
(90.6 %id)
BF575058 muscle (skeletal) .b 6937 to 7508 1 to 571       571/665
(85 %)
20 diff
(97.0 %id)
BC013749 Bladder, transitional cell papilloma .a 4868 to 6300 1 to 1433   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 1433/1433
(100 %)
2 diff
(99.9 %id)
BG291166 bladder, transitional cell papilloma, cell line .a 4869 to 5536 1 to 688   available from MGC,   686/1117
(61 %)
34 diff
(97.0 %id)
BG389288 embryonal carcinoma, cell line, testis .b 7001 to 7717 1 to 712       712/743
(95 %)
10 diff
(98.7 %id)
BG822321 adenocarcinoma cell line, colon .a 5172 to 5880 1 to 715       715/1099
(65 %)
19 diff
(98.3 %id)
BI712584 Pancreas, Purified pancreatic islet .d 3650 to 4024 375 to 1   fully sequenced,   375/375
(100 %)
0 diff
(100 %id)
BI712826 Pancreas, Purified pancreatic islet .d 3251 to 3711 1 to 461   fully sequenced,   461/461
(100 %)
2 diff
(99.6 %id)
BI914386 brain .b 6230 to 7070 1 to 844       844/844
(100 %)
8 diff
(99.1 %id)
BM012636 brain, neuroblastoma, cell line .b 5093 to 5674 1 to 580       580/944
(61 %)
9 diff
(99.1 %id)
CK822682 Pancreas, Purified pancreatic islet .d 4399 to 4953 1 to 555     Submitted on the opposite strand 555/555
(100 %)
1 diff
(99.9 %id)
BI962540 Islets of Langerhans, Pancreas .b 5252 to 5698 1 to 447       447/447
(100 %)
0 diff
(100 %id)
BI962545 Islets of Langerhans, Pancreas .b 5252 to 5483 1 to 232       232/232
(100 %)
0 diff
(100 %id)
BM141759 Islets of Langerhans, Pancreas .h 604 to 999 408 to 13   tiling clone,   396/408
(97 %)
0 diff
(100 %id)
BM142036 Islets of Langerhans, Pancreas .h 1 to 532 1 to 532 exact tiling clone,   532/532
(100 %)
0 diff
(100 %id)
BQ016810 lung, Lung Focal Fibrosis .b 7652 to 8323 691 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 673/673
(100 %)
1 diff
(99.9 %id)
BU155441 melanotic melanoma, skin .b 6061 to 6932 11 to 884   tiling clone,   874/884
(98 %)
6 diff
(99.4 %id)
BU184081 eye, retinoblastoma .a 4771 to 5656 1 to 887       887/944
(93 %)
17 diff
(98.2 %id)
BQ879907 dorsal root ganglia .d 3892 to 4801 1 to 913       913/913
(100 %)
6 diff
(99.4 %id)
CA776265 Pancreas, Purified pancreatic islet .a 1562 to 2168 607 to 1       607/607
(100 %)
0 diff
(100 %id)
CA776575 Pancreas, Purified pancreatic islet .a 51 to 681 10 to 640       631/640
(98 %)
6 diff
(99.1 %id)
CX760074 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .f 1 to 750 1 to 748 N246I L247X R248E tiling clone, Submitted on the opposite strand 748/823
(90 %)
4 diff
(99.6 %id)
DR159404 human embryonic stem cells differentiated toan early endodermal cell type .b 5200 to 6026 1 to 826   tiling clone,   826/826
(100 %)
2 diff
(99.8 %id)
BC171842 Brain, cerebral cortex, PCR rescued clones .c 65 to 5688 1 to 5624 exact tiling clone,   5624/5624
(100 %)
2 diff
(100.0 %id)
CB994172 placenta, pre-eclamptic placenta .b 5468 to 6069 27 to 630   tiling clone,   604/812
(74 %)
11 diff
(98.7 %id)
CB989633 Human Placenta, placenta .b 5490 to 5980 29 to 523       495/960
(51 %)
14 diff
(98.6 %id)
CD518170 White Matter .b 6361 to 7192 17 to 855       839/876
(95 %)
14 diff
(98.5 %id)
TI_57242993   .b 6229 to 7070 32 to 876       845/876
(96 %)
6 diff
(99.4 %id)
TI_59381858   .b 5094 to 5674 104 to 682       579/943
(61 %)
9 diff
(99.1 %id)
N84233   .b 7567 to 7740 1 to 173       173/204
(84 %)
3 diff
(98.6 %id)
CB148953 Liver .b 7224 to 7706 1 to 483       483/483
(100 %)
6 diff
(98.8 %id)
CB156873 Liver .b 7076 to 7594 1 to 518       518/518
(100 %)
3 diff
(99.5 %id)
DA672896   .a 3074 to 3673 2 to 601   capped   600/600
(100 %)
0 diff
(100 %id)
NM_020343.2   .a 15 to 6301 1 to 6287 exact RefSeq,   6287/6287
(100 %)
0 diff
(100 %id)
DA728083   .b 6871 to 7617 2 to 747   capped   746/746
(100 %)
3 diff
(99.6 %id)
AU128096   .d 3083 to 3689 2 to 610   capped   609/632
(96 %)
8 diff
(98.8 %id)
AU150415   .d 4644 to 5200 558 to 1       558/562
(99 %)
10 diff
(98.3 %id)
DA770014 brain .a 1 to 216 2 to 217   capped   216/216
(100 %)
0 diff
(100 %id)
DB325684 brain .a 1588 to 2165 578 to 1       578/578
(100 %)
1 diff
(99.9 %id)
DA794443 brain .a 3617 to 4136 2 to 522   capped   521/521
(100 %)
2 diff
(99.7 %id)
AU141005 placenta .a 1146 to 1994 5 to 847   capped   843/865
(97 %)
12 diff
(98.7 %id)
DA860656 placenta .a 1908 to 2401 2 to 495   capped   494/494
(100 %)
0 diff
(100 %id)
CR990457 T-Lymphocytes .c 1 to 706 1 to 706   tiling clone,   706/709
(99 %)
1 diff
(99.9 %id)
CR995744 T-Lymphocytes .b 4854 to 5544 1 to 691       691/695
(99 %)
3 diff
(99.6 %id)
BM856972 stomach .b 7014 to 7263 1 to 250       250/250
(100 %)
3 diff
(98.8 %id)
TI_1948073577   .a 4991 to 5656 138 to 804       667/1250
(53 %)
13 diff
(99.0 %id)
TI_1948073743   .a 4991 to 5460 136 to 605   fully sequenced,   470/605
(77 %)
6 diff
(99.1 %id)
TI_1948073744   .a 5430 to 5715 401 to 116   fully sequenced,   286/401
(71 %)
7 diff
(98.3 %id)
TI_1948073914   .a 4991 to 5116 136 to 261   fully sequenced,   126/152
(82 %)
6 diff
(96.1 %id)
TI_1948073915   .a 5055 to 5715 784 to 121   fully sequenced,   664/784
(84 %)
9 diff
(98.9 %id)
TI_1948074094   .a 4991 to 5396 137 to 542   fully sequenced,   406/542
(74 %)
7 diff
(98.8 %id)
TI_1948074095   .a 5335 to 5715 498 to 118   fully sequenced,   381/498
(76 %)
6 diff
(98.8 %id)
DA897220 skeletal muscle .b 7255 to 7816 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
T32001 uterus .b 6874 to 7091 1 to 218       218/222
(98 %)
1 diff
(99.6 %id)
DB091606 testis .d 287 to 661 2 to 376   capped   375/375
(100 %)
0 diff
(100 %id)
DB120839 thymus .a 1 to 563 2 to 564   tiling clone, capped   563/563
(100 %)
1 diff
(99.9 %id)
TI_149273215   .b 7396 to 8254 937 to 85   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 853/853
(100 %)
27 diff
(96.9 %id)
TI_149299988   .b 7174 to 7999 887 to 76   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 812/926
(87 %)
21 diff
(97.8 %id)
TI_149300745   .b 7176 to 7965 877 to 88   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 790/972
(81 %)
3 diff
(99.7 %id)
TI_149302170   .b 7178 to 8004 892 to 83   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 810/979
(82 %)
26 diff
(97.4 %id)
TI_149307124   .b 7226 to 8004 862 to 87   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 776/971
(79 %)
7 diff
(99.3 %id)
TI_149313814   .b 7228 to 7999 855 to 87   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 769/974
(78 %)
10 diff
(99.0 %id)
TI_154095714   .b 7178 to 8004 909 to 98   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 812/983
(82 %)
19 diff
(98.1 %id)
TI_154149686   .b 4653 to 5121 80 to 548       469/470
(99 %)
1 diff
(99.8 %id)
TI_154159165   .b 4628 to 5298 89 to 755   tiling clone,   667/667
(100 %)
10 diff
(98.6 %id)
TI_154174515   .b 5315 to 5972 80 to 739       660/660
(100 %)
20 diff
(97.0 %id)
TI_154174592   .b 5315 to 5921 89 to 698       610/612
(99 %)
8 diff
(98.7 %id)
TI_159722512   .b 8031 to 8323 55 to 348   AAA Submitted on the opposite strand 294/348
(84 %)
6 diff
(98.3 %id)
DB234379 trachea .a 1578 to 2144 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
BQ022700 placenta .b 7741 to 8259 537 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 519/519
(100 %)
0 diff
(100 %id)
BU675653 lung, Primary Lung Epithelial Cells .b 7648 to 8254 625 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 607/607
(100 %)
1 diff
(99.9 %id)
BU678522 lung, Primary Lung Epithelial Cells .b 7181 to 7850 1 to 670     Submitted on the opposite strand 670/670
(100 %)
3 diff
(99.6 %id)
BM979046 lung, Primary Lung Epithelial Cells .b 7356 to 8004 667 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 649/649
(100 %)
1 diff
(99.9 %id)
BU686273 lung, Primary Lung Epithelial Cells .b 7177 to 7915 1 to 739     Submitted on the opposite strand 739/739
(100 %)
2 diff
(99.8 %id)
BM976156 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 7235 to 7999 775 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 757/757
(100 %)
10 diff
(98.7 %id)
BM980419 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 7419 to 8004 604 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 586/586
(100 %)
0 diff
(100 %id)
BM976674 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 7183 to 7965 800 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 782/782
(100 %)
3 diff
(99.7 %id)
CB305659 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 7251 to 7999 765 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 747/750
(99 %)
4 diff
(99.5 %id)
BU608438 Human Lung Epithelial cells, lung .b 7176 to 7949 1 to 774     Submitted on the opposite strand 774/774
(100 %)
3 diff
(99.7 %id)
CA310888 Human Lung Epithelial cells, lung .b 8016 to 8322 1 to 307     Submitted on the opposite strand 307/312
(98 %)
6 diff
(98.1 %id)
CA502793 Human Lung Epithelial cells, lung .b 8016 to 8322 1 to 307     Submitted on the opposite strand 307/312
(98 %)
6 diff
(98.1 %id)
CB853093 Human Lung Epithelial cells, lung .b 8031 to 8323 10 to 303   AAA Submitted on the opposite strand 294/303
(97 %)
6 diff
(98.1 %id)
CB241716 Human Lung Epithelial cells, lung .b 7176 to 7852 1 to 677     Submitted on the opposite strand 677/677
(100 %)
2 diff
(99.8 %id)
BM693930 eye, RPE and Choroid .b 6905 to 7204 1 to 300   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 300/300
(100 %)
2 diff
(99.4 %id)
BM704798 eye, RPE and Choroid .b 6905 to 7207 1 to 303       303/323
(93 %)
2 diff
(99.4 %id)
BQ574284 Chondrosarcoma Grade II, Left Pelvis .d 4942 to 5218 277 to 1   tiling clone,   277/277
(100 %)
0 diff
(100 %id)
BU623355 cell lines, Enchondroma .b 7655 to 8254 620 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 602/602
(100 %)
2 diff
(99.7 %id)
TI_151764895   .b 7645 to 8322 104 to 781       678/682
(99 %)
4 diff
(99.5 %id)
W26433 eye, retina .c 1667 to 2108 457 to 17       441/458
(96 %)
3 diff
(99.4 %id)
TI_2194698836   .b 6229 to 7070 32 to 876     Submitted on the opposite strand, submitted on the opposite strand 845/876
(96 %)
6 diff
(99.4 %id)
BF896544 marrow .b 5094 to 5674 104 to 682       579/943
(61 %)
9 diff
(99.1 %id)
BG952311 colon .b 7567 to 7740 1 to 173       173/204
(84 %)
3 diff
(98.6 %id)
BX503130 Liver .b 7224 to 7706 1 to 483     This clone was ignored 483/483
(100 %)
6 diff
(98.8 %id)
BX503131 Liver .b 7076 to 7594 1 to 518     This clone was ignored 518/518
(100 %)
3 diff
(99.5 %id)
AV691012 hepatocellular carcinoma .a 3074 to 3673 2 to 601     This clone was ignored 600/600
(100 %)
0 diff
(100 %id)
AV700914 hepatocellular carcinoma .a 15 to 6301 1 to 6287   RefSeq, This clone was ignored 6287/6287
(100 %)
0 diff
(100 %id)
AV728475 hypothalamus .b 6871 to 7617 2 to 747     Suspected internal deletion, this clone was ignored 746/746
(100 %)
3 diff
(99.6 %id)
AW008802 colon .d 3083 to 3689 2 to 610       609/632
(96 %)
8 diff
(98.8 %id)
AW275149 lung, two pooled squamous cell carcinomas .d 4644 to 5200 558 to 1       558/562
(99 %)
10 diff
(98.3 %id)
DB148495 thymus .a 1 to 216 2 to 217   capped This clone was ignored 216/216
(100 %)
0 diff
(100 %id)
DB345934 thymus .a 1588 to 2165 578 to 1     This clone was ignored 578/578
(100 %)
1 diff
(99.9 %id)
TI_149274007   .a 3617 to 4136 2 to 522       521/521
(100 %)
2 diff
(99.7 %id)
TI_149275192   .a 1146 to 1994 5 to 847       843/865
(97 %)
12 diff
(98.7 %id)
DB198787 trachea .a 1908 to 2401 2 to 495   capped   494/494
(100 %)
0 diff
(100 %id)
DB348237 trachea .c 1 to 706 1 to 706   tiling clone,   706/709
(99 %)
1 diff
(99.9 %id)
DB205045 trachea .b 4854 to 5544 1 to 691   capped   691/695
(99 %)
3 diff
(99.6 %id)
DB348562 trachea .b 7014 to 7263 1 to 250       250/250
(100 %)
3 diff
(98.8 %id)
DB229877 trachea .a 4991 to 5656 138 to 804   capped This clone was ignored 667/1250
(53 %)
13 diff
(99.0 %id)
DB349944 trachea .a 4991 to 5460 136 to 605     This clone was ignored 470/605
(77 %)
6 diff
(99.1 %id)
BM968641 lung, Primary Lung Epithelial Cells .a 5430 to 5715 401 to 116   AAA   286/401
(71 %)
7 diff
(98.3 %id)
BM968390 lung, Primary Lung Epithelial Cells .a 4991 to 5116 136 to 261   AAA   126/152
(82 %)
6 diff
(96.1 %id)
BM682579 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 5055 to 5715 784 to 121   fully sequenced, AAA Suspected internal deletion, this clone was ignored 664/784
(84 %)
9 diff
(98.9 %id)
BM726152 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 4991 to 5396 137 to 542   fully sequenced, Suspected internal deletion, this clone was ignored 406/542
(74 %)
7 diff
(98.8 %id)
DB282775 uterus .a 5335 to 5715 498 to 118   capped   381/498
(76 %)
6 diff
(98.8 %id)
DB352604 uterus .b 7255 to 7816 2 to 563       562/562
(100 %)
0 diff
(100 %id)
T32001 uterus .b 6874 to 7091 1 to 218       218/222
(98 %)
1 diff
(99.6 %id)
DB091606 testis .d 287 to 661 2 to 376   capped   375/375
(100 %)
0 diff
(100 %id)
DB120839 thymus .a 1 to 563 2 to 564   tiling clone, capped   563/563
(100 %)
1 diff
(99.9 %id)
TI_149273215   .b 7396 to 8254 937 to 85   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 853/853
(100 %)
27 diff
(96.9 %id)
TI_149299988   .b 7174 to 7999 887 to 76   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 812/926
(87 %)
21 diff
(97.8 %id)
TI_149300745   .b 7176 to 7965 877 to 88   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 790/972
(81 %)
3 diff
(99.7 %id)
TI_149302170   .b 7178 to 8004 892 to 83   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 810/979
(82 %)
26 diff
(97.4 %id)
TI_149307124   .b 7226 to 8004 862 to 87   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 776/971
(79 %)
7 diff
(99.3 %id)
TI_149313814   .b 7228 to 7999 855 to 87   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 769/974
(78 %)
10 diff
(99.0 %id)
TI_154095714   .b 7178 to 8004 909 to 98   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 812/983
(82 %)
19 diff
(98.1 %id)
TI_154149686   .b 4653 to 5121 80 to 548       469/470
(99 %)
1 diff
(99.8 %id)
TI_154159165   .b 4628 to 5298 89 to 755   tiling clone,   667/667
(100 %)
10 diff
(98.6 %id)
TI_154174515   .b 5315 to 5972 80 to 739       660/660
(100 %)
20 diff
(97.0 %id)
TI_154174592   .b 5315 to 5921 89 to 698       610/612
(99 %)
8 diff
(98.7 %id)
TI_159722512   .b 8031 to 8323 55 to 348   AAA Submitted on the opposite strand 294/348
(84 %)
6 diff
(98.3 %id)
DB234379 trachea .a 1578 to 2144 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
BQ022700 placenta .b 7741 to 8259 537 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 519/519
(100 %)
0 diff
(100 %id)
BU675653 lung, Primary Lung Epithelial Cells .b 7648 to 8254 625 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 607/607
(100 %)
1 diff
(99.9 %id)
BU675653 lung, Primary Lung Epithelial Cells .b 7648 to 8254 625 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 607/607
(100 %)
1 diff
(99.9 %id)
BU678522 lung, Primary Lung Epithelial Cells .b 7181 to 7850 1 to 670     Submitted on the opposite strand 670/670
(100 %)
3 diff
(99.6 %id)
BU678522 lung, Primary Lung Epithelial Cells .b 7181 to 7850 1 to 670     Submitted on the opposite strand 670/670
(100 %)
3 diff
(99.6 %id)
BM979046 lung, Primary Lung Epithelial Cells .b 7356 to 8004 667 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 649/649
(100 %)
1 diff
(99.9 %id)
BM979046 lung, Primary Lung Epithelial Cells .b 7356 to 8004 667 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 649/649
(100 %)
1 diff
(99.9 %id)
BU686273 lung, Primary Lung Epithelial Cells .b 7177 to 7915 1 to 739     Submitted on the opposite strand 739/739
(100 %)
2 diff
(99.8 %id)
BU686273 lung, Primary Lung Epithelial Cells .b 7177 to 7915 1 to 739     Submitted on the opposite strand 739/739
(100 %)
2 diff
(99.8 %id)
BM976156 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 7235 to 7999 775 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 757/757
(100 %)
10 diff
(98.7 %id)
BM976156 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 7235 to 7999 775 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 757/757
(100 %)
10 diff
(98.7 %id)
BM980419 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 7419 to 8004 604 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 586/586
(100 %)
0 diff
(100 %id)
BM980419 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 7419 to 8004 604 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 586/586
(100 %)
0 diff
(100 %id)
BM976674 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 7183 to 7965 800 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 782/782
(100 %)
3 diff
(99.7 %id)
BM976674 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 7183 to 7965 800 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 782/782
(100 %)
3 diff
(99.7 %id)
CB305659 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 7251 to 7999 765 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 747/750
(99 %)
4 diff
(99.5 %id)
CB305659 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 7251 to 7999 765 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 747/750
(99 %)
4 diff
(99.5 %id)
BU608438 Human Lung Epithelial cells, lung .b 7176 to 7949 1 to 774     Submitted on the opposite strand 774/774
(100 %)
3 diff
(99.7 %id)
BU608438 Human Lung Epithelial cells, lung .b 7176 to 7949 1 to 774     Submitted on the opposite strand 774/774
(100 %)
3 diff
(99.7 %id)
CA310888 Human Lung Epithelial cells, lung .b 8016 to 8322 1 to 307     Submitted on the opposite strand 307/312
(98 %)
6 diff
(98.1 %id)
CA310888 Human Lung Epithelial cells, lung .b 8016 to 8322 1 to 307     Submitted on the opposite strand 307/312
(98 %)
6 diff
(98.1 %id)
CA502793 Human Lung Epithelial cells, lung .b 8016 to 8322 1 to 307     Submitted on the opposite strand 307/312
(98 %)
6 diff
(98.1 %id)
CA502793 Human Lung Epithelial cells, lung .b 8016 to 8322 1 to 307     Submitted on the opposite strand 307/312
(98 %)
6 diff
(98.1 %id)
CB853093 Human Lung Epithelial cells, lung .b 8031 to 8323 10 to 303   AAA Submitted on the opposite strand 294/303
(97 %)
6 diff
(98.1 %id)
CB853093 Human Lung Epithelial cells, lung .b 8031 to 8323 10 to 303   AAA Submitted on the opposite strand 294/303
(97 %)
6 diff
(98.1 %id)
CB241716 Human Lung Epithelial cells, lung .b 7176 to 7852 1 to 677     Submitted on the opposite strand 677/677
(100 %)
2 diff
(99.8 %id)
CB241716 Human Lung Epithelial cells, lung .b 7176 to 7852 1 to 677     Submitted on the opposite strand 677/677
(100 %)
2 diff
(99.8 %id)
BM693930 eye, RPE and Choroid .b 6905 to 7204 1 to 300   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 300/300
(100 %)
2 diff
(99.4 %id)
BM693930 eye, RPE and Choroid .b 6905 to 7204 1 to 300   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 300/300
(100 %)
2 diff
(99.4 %id)
BM704798 eye, RPE and Choroid .b 6905 to 7207 1 to 303       303/323
(93 %)
2 diff
(99.4 %id)
BM704798 eye, RPE and Choroid .b 6905 to 7207 1 to 303       303/323
(93 %)
2 diff
(99.4 %id)
BQ574284 Chondrosarcoma Grade II, Left Pelvis .d 4942 to 5218 277 to 1   tiling clone,   277/277
(100 %)
0 diff
(100 %id)
BQ574284 Chondrosarcoma Grade II, Left Pelvis .d 4942 to 5218 277 to 1   tiling clone,   277/277
(100 %)
0 diff
(100 %id)
BU623355 cell lines, Enchondroma .b 7655 to 8254 620 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 602/602
(100 %)
2 diff
(99.7 %id)
BU623355 cell lines, Enchondroma .b 7655 to 8254 620 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 602/602
(100 %)
2 diff
(99.7 %id)
TI_151764895   .b 7645 to 8322 104 to 781       678/682
(99 %)
4 diff
(99.5 %id)
W26433 eye, retina .c 1667 to 2108 457 to 17       441/458
(96 %)
3 diff
(99.4 %id)
W26433 eye, retina .c 1667 to 2108 457 to 17       441/458
(96 %)
3 diff
(99.4 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i-u, .j-u, .k-u, .l-u, .m-u, .n-u, .o-u, .p Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI