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Gene RAE1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
608 representative clones for gene RAE1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK309743   .a 1 to 1502 1 to 1502 exact tiling clone,   1502/1502
(100 %)
2 diff
(99.9 %id)
BG721549 testis .b -8 to 708 1 to 718       718/719
(99 %)
13 diff
(98.2 %id)
BG717696 testis .b -8 to 587 1 to 601       601/710
(84 %)
16 diff
(97.8 %id)
DA371871 thalamus .b 1 to 528 19 to 546   tiling clone, capped   531/531
(100 %)
0 diff
(100 %id)
BF212904 bone marrow, from chronic myelogenous leukemia .b 8 to 772 1 to 764       764/797
(95 %)
40 diff
(95.0 %id)
CR625649 T cells (Jurkat cell line) Cot10-normalized .b 42 to 1559 1 to 1518   tiling clone,   1518/1518
(100 %)
0 diff
(100 %id)
AL559043 T cells from T cell leukemia .b 42 to 809 1 to 766   fully sequenced,   766/766
(100 %)
2 diff
(99.8 %id)
BI822401 pooled brain, lung, testis .b 47 to 723 1 to 675       675/675
(100 %)
7 diff
(99.0 %id)
AW732930 choriocarcinoma, placenta .b 56 to 589 1 to 534       534/534
(100 %)
8 diff
(98.6 %id)
BE733111 choriocarcinoma, placenta .b 62 to 793 1 to 728       728/728
(100 %)
8 diff
(99.0 %id)
BE901536 choriocarcinoma, placenta .b 62 to 775 1 to 708       708/935
(75 %)
11 diff
(98.9 %id)
CN414177 embryonic stem cells, cell lines H1, H7, andH9 .b 72 to 421 1 to 351       351/351
(100 %)
1 diff
(99.8 %id)
W40233 Pancreas, pancreatic islet .b 72 to 387 1 to 317       317/317
(100 %)
3 diff
(99.1 %id)
AL580748 T cells from T cell leukemia .b 748 to 1559 813 to 1   fully sequenced,   813/813
(100 %)
24 diff
(97.1 %id)
W45468 Pancreas, pancreatic islet .b 1174 to 1598 430 to 2   tiling clone,   429/431
(99 %)
0 diff
(100 %id)
DB023721 testis .c 1 to 539 2 to 540   tiling clone, capped   539/539
(100 %)
1 diff
(99.9 %id)
AI802032 carcinoid, lung .c 514 to 1750 1 to 766 R205M R216X F221S K224R K227X ... tiling clone, Submitted on the opposite strand 766/777
(98 %)
11 diff
(98.6 %id)
AK292247 testis .d 1 to 1838 1 to 1838 exact tiling clone,   1838/1838
(100 %)
0 diff
(100 %id)
DC395201 testis .d 1 to 545 1 to 545       545/545
(100 %)
0 diff
(100 %id)
DC397772 testis .d 3 to 557 1 to 556       556/556
(100 %)
1 diff
(99.9 %id)
DC394664 testis .d 6 to 570 1 to 565       565/565
(100 %)
1 diff
(99.9 %id)
DC396141 testis .d 11 to 627 1 to 618       618/618
(100 %)
1 diff
(99.9 %id)
DC394849 testis .d 13 to 574 1 to 563       563/563
(100 %)
2 diff
(99.7 %id)
DC396218 testis .d 13 to 551 1 to 539       539/539
(100 %)
1 diff
(99.9 %id)
DC396459 testis .d 13 to 590 1 to 579       579/579
(100 %)
2 diff
(99.7 %id)
DC396869 testis .d 13 to 581 1 to 569       569/569
(100 %)
1 diff
(99.9 %id)
DC398679 testis .d 13 to 575 1 to 563       563/563
(100 %)
0 diff
(100 %id)
DC398707 testis .d 13 to 587 1 to 577       577/577
(100 %)
3 diff
(99.5 %id)
DB476916 hippocampus .d 20 to 526 1 to 507       507/507
(100 %)
1 diff
(99.9 %id)
DC396507 testis .d 20 to 601 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DC397159 testis .d 20 to 592 1 to 574       574/574
(100 %)
0 diff
(100 %id)
DC398634 testis .d 20 to 581 1 to 563       563/563
(100 %)
1 diff
(99.9 %id)
DC399191 testis .d 20 to 587 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DC399423 testis .d 20 to 529 1 to 511       511/511
(100 %)
1 diff
(99.9 %id)
DC399551 testis .d 20 to 556 1 to 537       537/537
(100 %)
0 diff
(100 %id)
DC399597 testis .d 20 to 539 1 to 521       521/521
(100 %)
4 diff
(99.3 %id)
CD251802 testis .d 21 to 855 17 to 854       838/855
(98 %)
14 diff
(98.4 %id)
DC397313 testis .d 21 to 575 1 to 555       555/555
(100 %)
1 diff
(99.9 %id)
DC394836 testis .d 23 to 581 1 to 564       564/564
(100 %)
5 diff
(99.2 %id)
DC394975 testis .d 23 to 574 1 to 553       553/553
(100 %)
1 diff
(99.9 %id)
DC395257 testis .d 23 to 570 1 to 548       548/548
(100 %)
0 diff
(100 %id)
DC395503 testis .d 23 to 589 1 to 567       567/567
(100 %)
0 diff
(100 %id)
DC396408 testis .d 23 to 586 1 to 564       564/564
(100 %)
2 diff
(99.7 %id)
DC397046 testis .d 23 to 589 1 to 567       567/567
(100 %)
0 diff
(100 %id)
DC398181 testis .d 23 to 581 1 to 559       559/559
(100 %)
1 diff
(99.9 %id)
DC398797 testis .d 23 to 587 1 to 565       565/565
(100 %)
0 diff
(100 %id)
DC399238 testis .d 23 to 587 1 to 565       565/565
(100 %)
1 diff
(99.9 %id)
DC399655 testis .d 23 to 539 1 to 517       517/517
(100 %)
2 diff
(99.7 %id)
BI459047 testis .d 24 to 766 7 to 752       746/943
(79 %)
16 diff
(98.4 %id)
DC395186 testis .d 24 to 570 1 to 547       547/547
(100 %)
0 diff
(100 %id)
BG716941 testis .d 28 to 785 1 to 757       757/757
(100 %)
7 diff
(99.1 %id)
AY349350 testis .d 33 to 1861 1 to 1829 A120V tiling clone, AAA   1829/1829
(100 %)
5 diff
(99.8 %id)
NM_001015885.1   .d 33 to 1871 1 to 1839 exact RefSeq,   1839/1839
(100 %)
3 diff
(99.9 %id)
DC395260 testis .d 33 to 592 1 to 560       560/560
(100 %)
0 diff
(100 %id)
DC395297 testis .d 34 to 584 1 to 551       551/551
(100 %)
1 diff
(99.9 %id)
DC398251 testis .d 35 to 594 1 to 560       560/560
(100 %)
0 diff
(100 %id)
DC399672 testis .d 40 to 568 1 to 530       530/530
(100 %)
1 diff
(99.9 %id)
DC398543 testis .d 42 to 609 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DC394921 testis .d 45 to 599 1 to 555       555/555
(100 %)
2 diff
(99.7 %id)
DC395097 testis .d 45 to 539 1 to 495       495/495
(100 %)
1 diff
(99.8 %id)
DC398316 testis .d 45 to 603 1 to 561       561/561
(100 %)
2 diff
(99.7 %id)
DC399338 testis .d 45 to 586 1 to 543       543/543
(100 %)
1 diff
(99.9 %id)
BI827165 brain, medulla .d 59 to 837 1 to 780       780/781
(99 %)
3 diff
(99.7 %id)
TI_57174479   .d 60 to 837 34 to 812       779/813
(95 %)
7 diff
(99.2 %id)
DC397112 testis .d 70 to 646 1 to 578       578/578
(100 %)
1 diff
(99.9 %id)
DC397596 testis .e 1 to 562 1 to 561   tiling clone,   561/561
(100 %)
1 diff
(99.9 %id)
DC398438 testis .e 22 to 591 1 to 571       571/571
(100 %)
2 diff
(99.7 %id)
AU124869   .e 43 to 836 2 to 795   tiling clone, capped   794/798
(99 %)
10 diff
(98.8 %id)
BE742654 adenocarcinoma cell line, ovary .e 121 to 775 1 to 651   tiling clone,   651/651
(100 %)
4 diff
(99.4 %id)
NM_003610.3   .e 121 to 1935 1 to 1815 exact RefSeq,   1815/1815
(100 %)
3 diff
(99.9 %id)
BG701375 brain, hippocampus .e 243 to 1084 1 to 843       843/850
(99 %)
16 diff
(98.2 %id)
DC360663   .e 247 to 749 1 to 504       504/504
(100 %)
1 diff
(99.9 %id)
DC397320 testis .e 247 to 808 1 to 562       562/562
(100 %)
1 diff
(99.9 %id)
AK307966 brain .e 258 to 1921 1 to 1665 N351K Y352L I353H L355P R356A ...     1665/1665
(100 %)
1 diff
(100.0 %id)
DC350686 brain .e 258 to 789 1 to 532       532/532
(100 %)
0 diff
(100 %id)
BM829423 Ascites, stomach .e 259 to 849 1 to 591       591/591
(100 %)
0 diff
(100 %id)
DC344751 colon .e 260 to 811 1 to 552       552/552
(100 %)
0 diff
(100 %id)
DC393630 colon, tumor tissue .e 261 to 836 1 to 576       576/576
(100 %)
0 diff
(100 %id)
DC398817 testis .e 266 to 829 1 to 564       564/564
(100 %)
0 diff
(100 %id)
AU134451 ovary, tumor tissue .e 272 to 1017 2 to 745   capped   744/744
(100 %)
6 diff
(99.2 %id)
BQ439680 melanotic melanoma, skin .e 276 to 1100 1 to 833       833/858
(97 %)
18 diff
(98.0 %id)
BX363101   .e 279 to 696 1 to 421       421/421
(100 %)
7 diff
(98.4 %id)
BI823763 pooled brain, lung, testis .e 279 to 1069 1 to 793       793/793
(100 %)
10 diff
(98.8 %id)
BI916158 brain .e 279 to 1154 1 to 879       879/882
(99 %)
9 diff
(99.0 %id)
BU161846 melanotic melanoma, skin .e 279 to 1041 20 to 791       772/841
(91 %)
19 diff
(97.8 %id)
DR761334 embryonic stem .e 279 to 1062 1 to 784       784/784
(100 %)
0 diff
(100 %id)
TI_57202538   .e 279 to 1069 70 to 862       793/862
(91 %)
15 diff
(98.3 %id)
TI_57239676   .e 279 to 1154 45 to 923       879/926
(94 %)
14 diff
(98.5 %id)
AU142532   .e 279 to 1100 2 to 822   capped   821/821
(100 %)
7 diff
(99.2 %id)
BC103754 Uterus, leiomyosarcoma .e 280 to 1926 1 to 1647 exact tiling clone, AAA   1647/1647
(100 %)
0 diff
(100 %id)
CR605228 fetal brain .e 280 to 1919 1 to 1640 exact     1640/1640
(100 %)
0 diff
(100 %id)
BX419448 brain, fetal brain .e 280 to 1241 1 to 959   fully sequenced,   959/959
(100 %)
3 diff
(99.7 %id)
BI255424 cervical carcinoma cell line, cervix .e 280 to 1086 1 to 811       811/811
(100 %)
21 diff
(97.5 %id)
BU192149 large cell carcinoma, lung .e 280 to 1102 1 to 825       825/872
(94 %)
5 diff
(99.5 %id)
BG831157 epithelioid carcinoma cell line, Pancreas .e 281 to 1075 1 to 794       794/802
(99 %)
10 diff
(98.8 %id)
BI765400 pooled colon, kidney, stomach .e 281 to 1085 1 to 805       805/805
(100 %)
14 diff
(98.3 %id)
CR619404 B cells (Ramos cell line) Cot 25-normalized .e 282 to 1862 1 to 1581 exact     1581/1581
(100 %)
0 diff
(100 %id)
AL560827 B cells from Burkitt lymphoma .e 282 to 1210 1 to 943       940/1016
(92 %)
28 diff
(97.3 %id)
BG721375 testis .e 282 to 1071 1 to 795       793/924
(85 %)
11 diff
(98.9 %id)
BG830809 epithelioid carcinoma cell line, Pancreas .e 282 to 1060 1 to 779       779/781
(99 %)
19 diff
(97.6 %id)
BU507584 leiomyosarcoma, uterus .e 282 to 1085 1 to 815       815/867
(94 %)
18 diff
(98.0 %id)
DC345364 tongue, tumor tissue .e 288 to 977 1 to 691       691/691
(100 %)
1 diff
(99.9 %id)
AU137598 placenta .e 288 to 998 2 to 717   capped   716/749
(95 %)
8 diff
(99.0 %id)
CR621755 B cells (Ramos cell line) .e 289 to 1909 1 to 1621 exact     1621/1621
(100 %)
0 diff
(100 %id)
BU596557 mixed (pool of 40 RNAs) .e 290 to 1097 1 to 811       811/811
(100 %)
11 diff
(98.7 %id)
BI835562 pooled pancreas and spleen .e 292 to 1084 1 to 794       794/795
(99 %)
8 diff
(99.0 %id)
BM803581 leiomyosarcoma, uterus .e 292 to 1210 1 to 921       921/1049
(87 %)
7 diff
(99.4 %id)
BI767864 pooled lung and spleen .e 293 to 1140 1 to 849       849/849
(100 %)
2 diff
(99.8 %id)
TI_57183954   .e 293 to 1140 116 to 964       849/964
(88 %)
8 diff
(99.2 %id)
U84720   .e 293 to 1927 20 to 1654 exact AAA   1635/1654
(98 %)
11 diff
(99.4 %id)
CR590192 T cells (Jurkat cell line) .e 294 to 1922 1 to 1629 exact     1629/1629
(100 %)
0 diff
(100 %id)
CR624730 Placenta Cot 25-normalized .e 294 to 1900 1 to 1607 exact     1607/1607
(100 %)
0 diff
(100 %id)
CR626728 Placenta Cot 25-normalized .e 294 to 1896 1 to 1603 exact     1603/1603
(100 %)
0 diff
(100 %id)
AL543121 placenta, Placenta Cot 25-normalized .e 294 to 1134 1 to 839   fully sequenced,   839/839
(100 %)
7 diff
(99.2 %id)
BU167191 melanotic melanoma, skin .e 295 to 1085 1 to 800       800/865
(92 %)
15 diff
(98.3 %id)
CX752529 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .e 295 to 1005 1 to 711     Submitted on the opposite strand 711/711
(100 %)
0 diff
(100 %id)
BQ880415 ductal carcinoma, cell line, Pancreas .e 296 to 1162 1 to 873       873/876
(99 %)
11 diff
(98.8 %id)
BQ219783 large cell carcinoma, lung .e 299 to 1098 40 to 846       807/1094
(73 %)
25 diff
(97.8 %id)
BQ064088 lymph, lymphoma, cell line .e 300 to 1101 1 to 802       802/1003
(79 %)
1 diff
(100.0 %id)
CR993776 T-Lymphocytes .e 302 to 1080 1 to 779       779/784
(99 %)
1 diff
(99.9 %id)
CR622985 Placenta Cot 25-normalized .e 304 to 1907 1 to 1604 exact     1604/1604
(100 %)
0 diff
(100 %id)
BX418453 brain, fetal brain .e 304 to 1363 13 to 1061       1049/1093
(95 %)
17 diff
(98.5 %id)
AL543822 placenta, Placenta Cot 25-normalized .e 304 to 1064 1 to 760   fully sequenced,   760/760
(100 %)
2 diff
(99.8 %id)
BG683045 brain, neuroblastoma, cell line .e 304 to 1165 1 to 864   fully sequenced,   864/864
(100 %)
8 diff
(99.1 %id)
BI521437 pooled pancreas and spleen .e 304 to 1081 1 to 774       774/776
(99 %)
18 diff
(97.7 %id)
BM545685 ovary (pool of 3) .e 304 to 1103 1 to 804       804/982
(81 %)
5 diff
(99.5 %id)
BQ878723 dorsal root ganglia .e 304 to 1204 28 to 939       912/949
(96 %)
35 diff
(96.4 %id)
BQ069868 brain, neuroblastoma, cell line .e 305 to 1285 1 to 992       992/1018
(97 %)
24 diff
(97.7 %id)
BQ069752 brain, neuroblastoma, cell line .e 306 to 1285 1 to 988       988/988
(100 %)
17 diff
(98.3 %id)
BQ070388 brain, neuroblastoma, cell line .e 306 to 1264 1 to 971       971/971
(100 %)
23 diff
(97.7 %id)
BU184960 large cell carcinoma, lung .e 306 to 1175 1 to 875       875/888
(98 %)
14 diff
(98.5 %id)
BQ961874 epithelioid carcinoma cell line, Pancreas .e 306 to 1210 1 to 906       906/922
(98 %)
19 diff
(98.0 %id)
CV806322 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .e 306 to 1102 1 to 797       797/858
(92 %)
3 diff
(99.7 %id)
BU186691 embryonal carcinoma, cell line, testis .e 307 to 1102 1 to 803       803/880
(91 %)
11 diff
(98.8 %id)
BI766896 pooled lung and spleen .e 308 to 1060 1 to 752       752/752
(100 %)
1 diff
(99.9 %id)
BI768150 pooled lung and spleen .e 308 to 1158 1 to 854       854/856
(99 %)
9 diff
(99.0 %id)
BP380461   .e 308 to 1098 1 to 793       793/823
(96 %)
25 diff
(97.0 %id)
BX443568 T cells (Jurkat cell line) .e 309 to 1396 15 to 1096       1082/1096
(98 %)
15 diff
(98.7 %id)
BX339865 Placenta Cot 25-normalized .e 309 to 1064 15 to 770   fully sequenced,   756/770
(98 %)
8 diff
(99.0 %id)
AI815591 brain, frontal lobe .e 309 to 861 1 to 552       552/555
(99 %)
3 diff
(99.5 %id)
CX163899 human embryonic stem cells differentiated toan early endodermal cell type .e 310 to 1157 1 to 848       848/848
(100 %)
0 diff
(100 %id)
CR601825 Placenta Cot 25-normalized .e 311 to 1900 1 to 1590 exact     1590/1590
(100 %)
0 diff
(100 %id)
BX357707 Placenta Cot 25-normalized .e 311 to 1134 1 to 823   fully sequenced,   823/823
(100 %)
1 diff
(99.9 %id)
TI_154188709   .e 311 to 1215 123 to 1014       892/948
(94 %)
31 diff
(96.8 %id)
CN414178 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 316 to 1044 1 to 729       729/729
(100 %)
1 diff
(99.9 %id)
CR602439 fetal brain .e 316 to 1901 1 to 1586 exact     1586/1586
(100 %)
0 diff
(100 %id)
AL534940 brain, fetal brain .e 316 to 1241 1 to 926   fully sequenced,   926/926
(100 %)
2 diff
(99.8 %id)
BG281059 melanotic melanoma, skin .e 320 to 1203 1 to 887       887/891
(99 %)
11 diff
(98.8 %id)
BG476020 melanotic melanoma, skin .e 320 to 1211 1 to 896       894/946
(94 %)
30 diff
(96.9 %id)
BM721346 eye, fetal eye .e 321 to 956 1 to 635       635/635
(100 %)
1 diff
(99.9 %id)
BC106923 PCR rescued clones .e 323 to 1751 1 to 1429 exact     1429/1429
(100 %)
0 diff
(100 %id)
BC106924 PCR rescued clones .e 323 to 1751 1 to 1429 exact     1429/1429
(100 %)
0 diff
(100 %id)
BM454369 lymph, lymphoma, cell line .e 323 to 1102 1 to 784       784/1073
(73 %)
19 diff
(98.3 %id)
BE622044 melanotic melanoma, skin .e 327 to 998 1 to 667       667/719
(92 %)
10 diff
(98.7 %id)
AW402277 lymph .e 328 to 820 1 to 493       493/493
(100 %)
5 diff
(99.0 %id)
BE744222 adenocarcinoma cell line, ovary .e 328 to 1103 1 to 768       768/804
(95 %)
19 diff
(97.7 %id)
TI_154185615   .e 330 to 1096 115 to 871       757/843
(89 %)
13 diff
(98.5 %id)
BM693146 eye, Retina Foveal and Macular .e 331 to 696 1 to 369       369/369
(100 %)
2 diff
(99.5 %id)
BM802834 embryonal carcinoma, cell line, testis .e 332 to 1210 1 to 886       884/1151
(76 %)
22 diff
(98.1 %id)
BU167320 eye, retinoblastoma .e 332 to 1101 1 to 771       771/960
(80 %)
16 diff
(98.4 %id)
CR994871 T-Lymphocytes .e 332 to 1246 1 to 914       914/915
(99 %)
2 diff
(99.8 %id)
TI_57193216   .e 335 to 1085 103 to 853       751/751
(100 %)
5 diff
(99.4 %id)
BI862218 breast, mammary adenocarcinoma, cell line .e 337 to 1085 1 to 749       749/749
(100 %)
5 diff
(99.4 %id)
BE795752 lung, small cell carcinoma .e 339 to 1209 1 to 862       862/904
(95 %)
28 diff
(97.0 %id)
BU174010 adenocarcinoma, Pancreas .e 358 to 1204 1 to 851       851/937
(90 %)
13 diff
(98.7 %id)
BF797501 lymph, lymphoma, cell line .e 378 to 1104 1 to 732       732/1128
(64 %)
10 diff
(99.2 %id)
TI_154185808   .e 440 to 1211 106 to 873       768/942
(81 %)
12 diff
(98.8 %id)
AY336091   .e 444 to 1585 1 to 1142 A120T     1142/1142
(100 %)
3 diff
(99.8 %id)
BG764469 melanotic melanoma, high MDR (cell line), skin .e 491 to 1210 1 to 737       737/1068
(69 %)
25 diff
(97.7 %id)
BG764599 melanotic melanoma, high MDR (cell line), skin .e 491 to 1211 1 to 720       720/1011
(71 %)
11 diff
(99.0 %id)
DA678359   .e 528 to 1353 2 to 829   capped   828/829
(99 %)
6 diff
(99.3 %id)
AL047812 uterus .e 583 to 1045 1 to 464       464/464
(100 %)
1 diff
(99.8 %id)
CN414183 embryonic stem cells, cell lines H1, H7, andH9 .e 586 to 1210 1 to 624       624/625
(99 %)
1 diff
(99.9 %id)
TI_154140704   .e 602 to 1174 81 to 654       574/574
(100 %)
8 diff
(98.7 %id)
CB151885 cervix, Uterine .e 632 to 1271 1 to 640       640/640
(100 %)
1 diff
(99.9 %id)
BM793921 Ascites, stomach .e 654 to 1344 1 to 691       691/691
(100 %)
0 diff
(100 %id)
BE895708 melanotic melanoma, skin .e 657 to 1443 8 to 798       791/799
(98 %)
25 diff
(96.9 %id)
BX279754 melanotic melanoma, skin .e 675 to 1156 1 to 482       482/482
(100 %)
0 diff
(100 %id)
BM450153 melanotic melanoma, skin .e 675 to 1623 1 to 964       964/1042
(92 %)
25 diff
(97.7 %id)
BG471947 eye, retinoblastoma .e 705 to 1347 1 to 642       642/642
(100 %)
3 diff
(99.6 %id)
BM912838 amelanotic melanoma, cell line, skin .e 707 to 1564 1 to 863       863/1060
(81 %)
10 diff
(99.1 %id)
BM916577 amelanotic melanoma, cell line, skin .e 709 to 1691 24 to 1011       988/1069
(92 %)
35 diff
(96.8 %id)
BG107329 lymph, lymphoma, cell line .e 713 to 1458 1 to 752       752/925
(81 %)
17 diff
(98.2 %id)
BE536829 cervix .e 731 to 1398 1 to 672       672/681
(98 %)
11 diff
(98.4 %id)
CR988550 T-Lymphocytes .e 747 to 1576 1 to 832       832/833
(99 %)
5 diff
(99.4 %id)
AA029755 uterus .e 750 to 1280 15 to 550       536/551
(97 %)
12 diff
(97.9 %id)
BP379792 uterus .e 782 to 1336 1 to 554       554/554
(100 %)
3 diff
(99.5 %id)
AL041206 testis .e 785 to 1210 1 to 426       426/426
(100 %)
0 diff
(100 %id)
AA417133   .e 874 to 1350 1 to 477       477/477
(100 %)
0 diff
(100 %id)
CB122872 Liver .e 885 to 1456 1 to 572       572/572
(100 %)
0 diff
(100 %id)
AA355161   .e 916 to 1318 1 to 404       404/404
(100 %)
3 diff
(99.3 %id)
AA461607   .e 930 to 1436 1 to 507       507/507
(100 %)
0 diff
(100 %id)
BF768823 epid_tumor .e 945 to 1314 1 to 370       370/370
(100 %)
0 diff
(100 %id)
BI092075 cervix .e 956 to 1690 1 to 732       732/733
(99 %)
10 diff
(98.7 %id)
BX445759 T cells (Jurkat cell line) .e 996 to 1884 889 to 1       889/889
(100 %)
20 diff
(97.8 %id)
BP431757   .e 1015 to 1393 1 to 381       381/381
(100 %)
2 diff
(99.5 %id)
BQ650268 hepatocellular carcinoma, cell line, Liver .e 1017 to 1874 1 to 872       872/930
(93 %)
17 diff
(98.2 %id)
CR602444 Neuroblastoma Cot 25-normalized .e 1019 to 1932 1 to 914   tiling clone,   914/914
(100 %)
0 diff
(100 %id)
AL524723 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .e 1019 to 1932 1 to 914   fully sequenced,   914/914
(100 %)
2 diff
(99.8 %id)
TI_149302945   .e 1027 to 1924 962 to 78   AAA   885/978
(90 %)
16 diff
(98.4 %id)
AL570152 placenta, Placenta Cot 25-normalized .e 1034 to 1898 869 to 10   fully sequenced,   860/869
(98 %)
0 diff
(100 %id)
BX339864 Placenta Cot 25-normalized .e 1034 to 1897 868 to 4   fully sequenced,   865/868
(99 %)
1 diff
(99.9 %id)
AA064846   .e 1053 to 1512 1 to 464   fully sequenced,   464/464
(100 %)
1 diff
(99.8 %id)
AL524722 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .e 1073 to 1878 835 to 31   fully sequenced,   805/835
(96 %)
1 diff
(99.9 %id)
AL569779 placenta, Placenta Cot 25-normalized .e 1073 to 1896 825 to 1   fully sequenced,   825/825
(100 %)
8 diff
(99.1 %id)
BX357706 Placenta Cot 25-normalized .e 1073 to 1898 825 to 3   fully sequenced,   823/825
(99 %)
1 diff
(99.9 %id)
BG752160 eye, normal pigmented retinal epithelium .e 1076 to 1829 1 to 756       756/756
(100 %)
4 diff
(99.5 %id)
BE410549 choriocarcinoma, placenta .e 1095 to 1703 57 to 665       609/665
(91 %)
6 diff
(99.1 %id)
BX456054 T cells (Jurkat cell line) .e 1096 to 1914 821 to 7       815/821
(99 %)
15 diff
(98.2 %id)
BM907477 large cell carcinoma, lung .e 1104 to 1924 845 to 16   AAA Submitted on the opposite strand 830/968
(85 %)
15 diff
(98.5 %id)
TI_149300725   .e 1104 to 1924 892 to 77   AAA   816/983
(83 %)
13 diff
(98.7 %id)
N44536 melanocyte .e 1120 to 1551 1 to 440   fully sequenced,   440/440
(100 %)
2 diff
(99.6 %id)
N44849.
matches multiple genes
melanocyte .e 1120 to 1385 1 to 266     also hits gene CLCN3 266/267
(99 %)
2 diff
(99.3 %id)
AI307257 2 pooled tumors (clear cell type), Kidney .e 1129 to 1925 804 to 10       795/812
(97 %)
15 diff
(98.2 %id)
BG683701 brain, neuroblastoma, cell line .e 1135 to 1908 789 to 13   fully sequenced,   777/789
(98 %)
7 diff
(99.2 %id)
BX374160   .e 1139 to 1914 782 to 7       776/818
(94 %)
22 diff
(97.4 %id)
TI_149276555   .e 1142 to 1924 872 to 90   AAA   783/860
(91 %)
3 diff
(99.7 %id)
BM701854 eye, optic nerve .e 1147 to 1675 1 to 529       529/529
(100 %)
0 diff
(100 %id)
AA429381   .e 1173 to 1512 1 to 340   fully sequenced,   340/340
(100 %)
1 diff
(99.8 %id)
AL565714 brain, fetal brain .e 1180 to 1901 721 to 2   fully sequenced,   720/721
(99 %)
13 diff
(98.2 %id)
BQ437423 leiomyosarcoma, uterus .e 1203 to 1924 1 to 728       728/729
(99 %)
7 diff
(99.1 %id)
BM997201 Chondrosarcoma, Left Pubic Bone .e 1204 to 1924 739 to 19   AAA   721/721
(100 %)
0 diff
(100 %id)
BX455207 brain, fetal brain .e 1211 to 1889 721 to 39   fully sequenced,   683/721
(94 %)
0 diff
(100 %id)
AL582284 B cells from Burkitt lymphoma .e 1213 to 1862 652 to 1       652/851
(76 %)
15 diff
(98.3 %id)
BU740423 eye, fetal eye .e 1249 to 1924 694 to 19   AAA   676/676
(100 %)
0 diff
(100 %id)
BE966887 melanotic melanoma, skin .e 1251 to 1923 686 to 16   AAA   671/875
(76 %)
23 diff
(97.4 %id)
BM989388 Fibrosarcoma .e 1273 to 1926 673 to 19   AAA   655/655
(100 %)
8 diff
(98.8 %id)
DB384078   .e 1364 to 1924 559 to 1       559/567
(98 %)
10 diff
(98.3 %id)
DB362630   .e 1370 to 1926 557 to 1       557/558
(99 %)
11 diff
(98.1 %id)
AW575056 lymph .e 1373 to 1927 572 to 18   AAA   555/555
(100 %)
2 diff
(99.7 %id)
AA065211   .e 1451 to 1912 463 to 1   fully sequenced,   463/463
(100 %)
3 diff
(99.4 %id)
AA428314   .e 1462 to 1932 474 to 5   fully sequenced,   470/474
(99 %)
0 diff
(100 %id)
AA029287 uterus .e 1464 to 1926 484 to 22   AAA   463/463
(100 %)
4 diff
(99.2 %id)
AW002426 pooled germ cell tumors .e 1480 to 1926 449 to 3       447/450
(99 %)
0 diff
(100 %id)
DB376910 placenta .e 1480 to 1926 449 to 1       449/472
(95 %)
7 diff
(98.6 %id)
AI304558 adenocarcinoma, colon .e 1482 to 1563 82 to 1       82/82
(100 %)
2 diff
(97.6 %id)
AW052095 pooled .e 1482 to 1925 443 to 1       443/443
(100 %)
1 diff
(99.8 %id)
BE672375 pooled germ cell tumors .e 1482 to 1561 82 to 3       80/82
(97 %)
0 diff
(100 %id)
AI392716 B-cell, chronic lymphotic leukemia .e 1485 to 1746 262 to 1       262/262
(100 %)
0 diff
(100 %id)
AW169460 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .e 1491 to 1924 435 to 2       434/435
(99 %)
0 diff
(100 %id)
AI816546 brain, frontal lobe .e 1499 to 1926 435 to 8       428/435
(98 %)
0 diff
(100 %id)
DC425951 tongue, tumor tissue .e 1500 to 1931 435 to 1       435/440
(98 %)
8 diff
(98.2 %id)
BM975705 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 1505 to 1924 438 to 19   AAA   420/420
(100 %)
0 diff
(100 %id)
BM669014 eye, Retina Foveal and Macular .e 1506 to 1926 439 to 19   AAA   421/424
(99 %)
0 diff
(100 %id)
AA417021   .e 1508 to 1926 417 to 1       417/417
(100 %)
3 diff
(99.3 %id)
AI969274 pooled germ cell tumors .e 1519 to 1926 410 to 3       408/410
(99 %)
0 diff
(100 %id)
AI989939 pooled germ cell tumors .e 1519 to 1926 410 to 3       408/410
(99 %)
0 diff
(100 %id)
N33775 melanocyte .e 1521 to 1927 422 to 15   fully sequenced, AAA   408/408
(100 %)
3 diff
(99.3 %id)
AI092808 heart .e 1537 to 1926 401 to 12   AAA   390/390
(100 %)
0 diff
(100 %id)
FN086412 breast carcinoma .e 1539 to 1621 84 to 1     Submitted on the opposite strand 84/84
(100 %)
1 diff
(98.9 %id)
AA609644   .e 1546 to 1926 424 to 46   AAA   379/379
(100 %)
2 diff
(99.5 %id)
AI763364 colon, colon tumor, RER+ .e 1548 to 1931 384 to 1       384/384
(100 %)
0 diff
(100 %id)
AW089748 ovary, tumor, 5 pooled (see description) .e 1565 to 1926 364 to 3       362/364
(99 %)
0 diff
(100 %id)
AI913107 Kidney .e 1567 to 1927 384 to 24   AAA   361/361
(100 %)
2 diff
(99.5 %id)
AI863625 Kidney .e 1592 to 1924 343 to 11   AAA   333/333
(100 %)
0 diff
(100 %id)
BU535926 mixed (pool of 40 RNAs) .e 1627 to 1924 1 to 298   AAA   298/298
(100 %)
1 diff
(99.7 %id)
AW087241 colon, moderately differentiated adenocarcinoma .e 1634 to 1924 292 to 2       291/292
(99 %)
0 diff
(100 %id)
BE385821 melanotic melanoma, skin .e 1636 to 1924 1 to 290       290/290
(100 %)
1 diff
(99.7 %id)
AA632189 breast .e 1643 to 1926 314 to 32   AAA   283/283
(100 %)
1 diff
(99.7 %id)
T33528 brain .e 1643 to 1924 282 to 1       282/282
(100 %)
0 diff
(100 %id)
BI086668 cervix .e 1655 to 1926 1 to 272   AAA   272/272
(100 %)
0 diff
(100 %id)
CN414180 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 1687 to 1924 1 to 238       238/238
(100 %)
0 diff
(100 %id)
AI682683 adenocarcinoma, Pancreas .e 1691 to 1931 262 to 22   AAA   241/241
(100 %)
2 diff
(99.2 %id)
AI864412 anaplastic oligodendroglioma, brain .e 1698 to 1925 243 to 16   AAA   228/228
(100 %)
1 diff
(99.6 %id)
FN138811 breast carcinoma .e 1707 to 1810 104 to 1     Submitted on the opposite strand 104/104
(100 %)
0 diff
(100 %id)
AA460316   .e 1730 to 1926 196 to 1       196/196
(100 %)
1 diff
(99.5 %id)
AI373596 Kidney .e 1747 to 1924 178 to 1       178/178
(100 %)
0 diff
(100 %id)
BF590019 Kidney .e 1788 to 1924 137 to 1       137/137
(100 %)
1 diff
(99.3 %id)
DB044364 testis .f 1 to 476 2 to 479   tiling clone, capped   478/478
(100 %)
7 diff
(98.6 %id)
DB042638 testis .f 36 to 601 2 to 567   tiling clone, capped   566/566
(100 %)
0 diff
(100 %id)
DB442966 testis .f 78 to 505 1 to 429       429/429
(100 %)
5 diff
(98.9 %id)
BP371363 testis .f 84 to 664 1 to 580       580/581
(99 %)
3 diff
(99.5 %id)
BF979367 testis .f 86 to 777 1 to 695   tiling clone,   695/877
(79 %)
32 diff
(96.4 %id)
BP369655 testis .f 95 to 670 1 to 576       576/576
(100 %)
1 diff
(99.9 %id)
DB059298 testis .f 96 to 642 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
BP371333 testis .f 100 to 680 1 to 581       581/581
(100 %)
0 diff
(100 %id)
TI_57172463   .f 107 to 954 27 to 881   tiling clone,   855/892
(95 %)
27 diff
(97.0 %id)
BI828740 brain, medulla .f 108 to 954 1 to 854   tiling clone,   854/865
(98 %)
21 diff
(97.6 %id)
BG612799 embryonal carcinoma, testis .g 1 to 837 1 to 841 W156G D157I T158L R159D S160R ... tiling clone,   841/841
(100 %)
19 diff
(97.8 %id)
DA350992 substantia nigra .g 6 to 593 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DB053184 testis .g 10 to 586 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
TI_57200322   .g 25 to 715 52 to 740   tiling clone,   689/740
(93 %)
13 diff
(98.3 %id)
DA056982 cerebellum .g 30 to 624 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
DB024669 testis .h 1 to 553 2 to 554   tiling clone, capped   553/553
(100 %)
1 diff
(99.9 %id)
DB039808 testis .h 53 to 624 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DB450825 testis .h 65 to 556 1 to 493       493/494
(99 %)
7 diff
(98.6 %id)
DB034529 testis .h 66 to 644 2 to 581   tiling clone, capped   580/580
(100 %)
1 diff
(99.9 %id)
BI002162 head_normal .h 1139 to 1217 29 to 107   tiling clone,   79/107
(73 %)
6 diff
(94.4 %id)
AW002851 pooled germ cell tumors .h 1173 to 1308 136 to 1   tiling clone,   136/136
(100 %)
6 diff
(95.6 %id)
DB336386 testis .h 1250 to 1779 530 to 1   tiling clone,   530/530
(100 %)
0 diff
(100 %id)
BP202451 amygdala .h 1484 to 2062 1 to 580   tiling clone,   580/580
(100 %)
3 diff
(99.5 %id)
TI_149309357   .h 1787 to 2523 831 to 96   tiling clone, AAA   736/958
(76 %)
32 diff
(96.7 %id)
AU142776   .i 1 to 737 2 to 737   tiling clone, capped   736/833
(88 %)
10 diff
(98.8 %id)
BP272414   .i 2 to 611 1 to 610       610/610
(100 %)
6 diff
(99.1 %id)
DC356483 heart .i 5 to 570 1 to 565       565/565
(100 %)
2 diff
(99.7 %id)
DC393458 cervix, tumor tissue .i 9 to 488 1 to 480       480/483
(99 %)
2 diff
(99.6 %id)
CD689759 normal nasopharynx .i 10 to 320 23 to 334       312/334
(93 %)
9 diff
(97.4 %id)
DW429749 Liver .i 10 to 389 18 to 397       380/397
(95 %)
8 diff
(98.0 %id)
DC350999 brain .i 10 to 575 1 to 566       566/575
(98 %)
0 diff
(100 %id)
DC354679 lung .i 10 to 582 1 to 573       573/573
(100 %)
1 diff
(99.9 %id)
CB961201 Human Placenta, placenta .i 10 to 662 28 to 683       656/809
(81 %)
18 diff
(97.8 %id)
DC360129   .i 10 to 512 1 to 503       503/503
(100 %)
0 diff
(100 %id)
BP290321 lung .i 10 to 591 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
DC396633 testis .i 10 to 560 1 to 551       551/551
(100 %)
0 diff
(100 %id)
DC398103 testis .i 10 to 582 1 to 573       573/573
(100 %)
2 diff
(99.7 %id)
DC399009 testis .i 10 to 548 1 to 539       539/539
(100 %)
0 diff
(100 %id)
DC405769 thymus .i 10 to 551 1 to 542       542/542
(100 %)
0 diff
(100 %id)
CD683634 normal nasopharynx .i 11 to 434 19 to 442       424/442
(95 %)
7 diff
(98.5 %id)
DC317721 amygdala .i 13 to 599 1 to 587       587/587
(100 %)
1 diff
(99.9 %id)
DC352423 brain .i 13 to 551 1 to 539       539/539
(100 %)
0 diff
(100 %id)
DC393495 cervix, tumor tissue .i 13 to 579 1 to 567       567/567
(100 %)
1 diff
(99.9 %id)
DC354311 heart .i 14 to 539 1 to 526       526/526
(100 %)
2 diff
(99.7 %id)
DC298020   .i 15 to 595 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DC301508   .i 15 to 622 1 to 608       608/608
(100 %)
0 diff
(100 %id)
DC349840 brain .i 15 to 575 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DC353192 brain .i 15 to 575 1 to 561       561/561
(100 %)
0 diff
(100 %id)
BG427720 Kidney .i 15 to 605 1 to 589       589/594
(99 %)
4 diff
(99.4 %id)
DC360541   .i 15 to 570 1 to 556       556/556
(100 %)
0 diff
(100 %id)
CB113912 Liver .i 15 to 587 1 to 573       573/573
(100 %)
0 diff
(100 %id)
CB119780 Liver .i 15 to 320 1 to 306       306/306
(100 %)
0 diff
(100 %id)
DC371307   .i 15 to 573 1 to 559       559/559
(100 %)
0 diff
(100 %id)
DC372622   .i 15 to 578 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC394716 testis .i 15 to 569 1 to 555       555/555
(100 %)
0 diff
(100 %id)
DC397532 testis .i 15 to 567 1 to 553       553/553
(100 %)
1 diff
(99.9 %id)
CA453737 mixed (pool of 40 RNAs) .i 16 to 662 1 to 650       650/866
(75 %)
13 diff
(98.5 %id)
BP380624   .i 16 to 730 1 to 720       720/805
(89 %)
18 diff
(97.8 %id)
DC311263 alzheimer cortex .i 17 to 558 1 to 542       542/542
(100 %)
0 diff
(100 %id)
DC314406 amygdala .i 17 to 508 1 to 493       493/493
(100 %)
1 diff
(99.8 %id)
DC331762 hippocampus .i 17 to 592 1 to 576       576/576
(100 %)
2 diff
(99.7 %id)
DC332970 hippocampus .i 17 to 562 1 to 546       546/546
(100 %)
0 diff
(100 %id)
CD685770 normal nasopharynx .i 17 to 569 21 to 573       553/573
(96 %)
7 diff
(98.8 %id)
DC351466 brain .i 17 to 575 1 to 559       559/568
(98 %)
0 diff
(100 %id)
DC353155 brain .i 17 to 593 1 to 577       577/577
(100 %)
0 diff
(100 %id)
DC353178 brain .i 17 to 591 1 to 575       575/575
(100 %)
1 diff
(99.9 %id)
CB110426 Liver .i 17 to 236 1 to 221       221/221
(100 %)
5 diff
(97.8 %id)
DC375958 brain .i 17 to 594 1 to 579       579/579
(100 %)
1 diff
(99.9 %id)
BM787767 stomach .i 17 to 649 1 to 632       632/632
(100 %)
1 diff
(99.9 %id)
DC395758 testis .i 17 to 608 1 to 592       592/592
(100 %)
0 diff
(100 %id)
DC397343 testis .i 17 to 580 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC412332 kidney, tumor tissue .i 17 to 560 1 to 544       544/544
(100 %)
0 diff
(100 %id)
DC413453 lung, tumor tissue .i 17 to 592 1 to 576       576/576
(100 %)
0 diff
(100 %id)
BF797827 lymph, lymphoma, cell line .i 18 to 737 1 to 723       721/881
(81 %)
13 diff
(98.6 %id)
BG740956 skin .i 18 to 730 1 to 711       711/711
(100 %)
2 diff
(99.8 %id)
CD708926 normal nasopharynx .i 19 to 482 16 to 479       464/479
(96 %)
7 diff
(98.6 %id)
CR981127 T-Lymphocytes .i 19 to 724 1 to 707       707/713
(99 %)
2 diff
(99.8 %id)
DC309908 cerebellum .i 21 to 558 1 to 538       538/538
(100 %)
0 diff
(100 %id)
DB463498 hippocampus .i 21 to 448 1 to 429       429/429
(100 %)
4 diff
(99.1 %id)
DC398926 testis .i 22 to 582 1 to 562       562/562
(100 %)
4 diff
(99.3 %id)
DC351440 brain .i 23 to 575 1 to 553       553/553
(100 %)
1 diff
(99.9 %id)
DC398062 testis .i 23 to 585 1 to 563       563/563
(100 %)
1 diff
(99.9 %id)
BF974045 leiomyosarcoma cell line, uterus .i 24 to 698 1 to 671       671/931
(72 %)
8 diff
(99.2 %id)
DC372595   .i 24 to 571 1 to 548       548/548
(100 %)
2 diff
(99.7 %id)
DC375312 brain .i 24 to 602 1 to 579       579/579
(100 %)
2 diff
(99.7 %id)
DC313594 amygdala .i 25 to 575 1 to 551       551/560
(98 %)
2 diff
(99.7 %id)
DC351929 brain .i 25 to 571 1 to 547       547/547
(100 %)
2 diff
(99.7 %id)
DC354713 lung .i 25 to 616 1 to 592       592/592
(100 %)
2 diff
(99.7 %id)
BP273444   .i 25 to 575 1 to 550       550/550
(100 %)
4 diff
(99.3 %id)
DC395244 testis .i 25 to 575 1 to 551       551/560
(98 %)
1 diff
(99.9 %id)
BP375279 uterus .i 25 to 577 1 to 553       553/553
(100 %)
2 diff
(99.7 %id)
DC316488 amygdala .i 26 to 607 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DC330027 hippocampus .i 26 to 603 1 to 578       578/578
(100 %)
1 diff
(99.9 %id)
DC332210 hippocampus .i 26 to 607 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DC338059 subthalamic nucleus .i 26 to 582 1 to 557       557/557
(100 %)
0 diff
(100 %id)
DC339297 subthalamic nucleus .i 26 to 550 1 to 525       525/525
(100 %)
2 diff
(99.7 %id)
BP209983 cerebellum .i 26 to 607 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DC345137 colon .i 26 to 592 1 to 567       567/567
(100 %)
0 diff
(100 %id)
DC351041 brain .i 26 to 597 1 to 572       572/572
(100 %)
0 diff
(100 %id)
DC351346 brain .i 26 to 568 1 to 543       543/543
(100 %)
0 diff
(100 %id)
DC351600 brain .i 26 to 600 1 to 575       575/575
(100 %)
1 diff
(99.9 %id)
DC352927 brain .i 26 to 600 1 to 575       575/575
(100 %)
1 diff
(99.9 %id)
DC358658 lung .i 26 to 625 1 to 600       600/600
(100 %)
0 diff
(100 %id)
CB993653 placenta, pre-eclamptic placenta .i 26 to 731 28 to 739       710/858
(82 %)
16 diff
(98.2 %id)
DC360113   .i 26 to 529 1 to 504       504/504
(100 %)
0 diff
(100 %id)
DC360460   .i 26 to 578 1 to 553       553/553
(100 %)
0 diff
(100 %id)
CB112815 Liver .i 26 to 588 1 to 563       563/563
(100 %)
0 diff
(100 %id)
DC365947   .i 26 to 564 1 to 539       539/539
(100 %)
1 diff
(99.9 %id)
DC366202   .i 26 to 595 1 to 570       570/570
(100 %)
0 diff
(100 %id)
DC424261   .i 26 to 737 1 to 715       715/806
(88 %)
19 diff
(97.7 %id)
DC371222   .i 26 to 585 1 to 560       560/560
(100 %)
0 diff
(100 %id)
DC376515 brain .i 26 to 530 1 to 505       505/505
(100 %)
0 diff
(100 %id)
DC384732   .i 26 to 568 1 to 543       543/543
(100 %)
0 diff
(100 %id)
DC392243 stomach .i 26 to 578 1 to 553       553/553
(100 %)
0 diff
(100 %id)
DC392343 stomach .i 26 to 596 1 to 571       571/571
(100 %)
1 diff
(99.9 %id)
DC395328 testis .i 26 to 580 1 to 555       555/555
(100 %)
1 diff
(99.9 %id)
DC395873 testis .i 26 to 604 1 to 579       579/579
(100 %)
1 diff
(99.9 %id)
DC398350 testis .i 26 to 575 1 to 550       550/551
(99 %)
1 diff
(99.9 %id)
DC419861 uterus .i 26 to 582 1 to 557       557/557
(100 %)
0 diff
(100 %id)
DC421386 uterus .i 26 to 612 1 to 587       587/587
(100 %)
0 diff
(100 %id)
DC325748 caudate nucleus .i 27 to 602 1 to 576       576/576
(100 %)
0 diff
(100 %id)
DC325755 caudate nucleus .i 27 to 615 1 to 589       589/589
(100 %)
0 diff
(100 %id)
DC376800 brain .i 27 to 528 1 to 502       502/502
(100 %)
1 diff
(99.9 %id)
DA002605   .i 29 to 598 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA145214 amygdala .i 29 to 602 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA503433 brain .i 29 to 596 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BG702808 brain, hippocampus .i 29 to 654 1 to 626       626/626
(100 %)
6 diff
(99.1 %id)
BG704911 brain, hippocampus .i 29 to 633 1 to 606       606/606
(100 %)
8 diff
(98.7 %id)
BQ224596 melanotic melanoma, skin .i 31 to 573 1 to 545       545/1001
(54 %)
12 diff
(98.9 %id)
DA362395 subthalamic nucleus .i 32 to 582 2 to 552   capped   551/551
(100 %)
3 diff
(99.5 %id)
CD617266   .i 32 to 554 532 to 12       521/534
(97 %)
1 diff
(99.9 %id)
DW410057 Liver .i 33 to 356 13 to 336       324/336
(96 %)
6 diff
(98.3 %id)
CD691689 normal nasopharynx .i 34 to 641 39 to 646       608/646
(94 %)
6 diff
(99.1 %id)
CD703160 normal nasopharynx .i 34 to 585 31 to 581       551/581
(94 %)
10 diff
(98.3 %id)
BP226168   .i 34 to 613 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DW411210 Liver .i 34 to 349 15 to 330       316/330
(95 %)
6 diff
(98.2 %id)
DW420207 Liver .i 34 to 320 15 to 301       287/301
(95 %)
10 diff
(96.7 %id)
DN991974 brain, whole brain .i 34 to 715 10 to 691       682/691
(98 %)
6 diff
(99.2 %id)
BP371403 testis .i 34 to 616 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA007223   .i 35 to 607 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA056431 cerebellum .i 35 to 488 2 to 455   capped   454/454
(100 %)
0 diff
(100 %id)
DA786261 brain .i 35 to 631 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
DB191282 lung, tumor tissue .i 35 to 625 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DA137969 alzheimer cortex .i 36 to 587 2 to 553   capped   552/552
(100 %)
3 diff
(99.5 %id)
BF213251 bone marrow, from acute myelogenous leukemia .i 36 to 642 1 to 605       605/1218
(49 %)
16 diff
(98.7 %id)
BF676780 Prostate .i 36 to 679 1 to 642       642/642
(100 %)
5 diff
(99.3 %id)
DA613898   .i 36 to 590 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
BP272864   .i 36 to 596 1 to 561       561/561
(100 %)
3 diff
(99.5 %id)
BU656508 blood .i 37 to 444 12 to 419       408/419
(97 %)
7 diff
(98.4 %id)
DB468949 hippocampus .i 37 to 449 1 to 412       412/412
(100 %)
2 diff
(99.6 %id)
BP251096 hippocampus .i 37 to 620 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
BP253094 Kidney .i 37 to 606 1 to 570       570/570
(100 %)
2 diff
(99.7 %id)
BE958313 brain, primitive neuroectoderm .i 37 to 669 1 to 631       626/856
(73 %)
28 diff
(96.8 %id)
BG530379 embryonal carcinoma, testis .i 37 to 520 1 to 484       484/484
(100 %)
1 diff
(99.8 %id)
BG703810 brain, hippocampus .i 37 to 737 1 to 699       699/705
(99 %)
9 diff
(98.8 %id)
BM781961 myeloma .i 37 to 637 1 to 601       601/601
(100 %)
0 diff
(100 %id)
DA084158 cerebellum .i 38 to 606 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA138732 alzheimer cortex .i 38 to 556 2 to 520   capped   519/519
(100 %)
0 diff
(100 %id)
DA158732 amygdala .i 38 to 608 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DA206367 brain .i 38 to 609 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA279910 corpus callosum .i 38 to 607 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
CD617267   .i 38 to 554 1 to 517       517/529
(97 %)
3 diff
(99.5 %id)
DA517517 brain .i 38 to 546 2 to 510   capped   509/509
(100 %)
0 diff
(100 %id)
DA519941 brain .i 38 to 610 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA540393 lung .i 38 to 575 2 to 539   capped   538/547
(98 %)
0 diff
(100 %id)
BU154364 eye, retinoblastoma .i 38 to 575 7 to 548   AAA   542/830
(65 %)
11 diff
(98.7 %id)
DA768958 brain .i 38 to 555 2 to 519   capped   518/518
(100 %)
0 diff
(100 %id)
DA874625 Prostate .i 38 to 605 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA964434 stomach .i 38 to 603 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DB043429 testis .i 38 to 610 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
DB058982 testis .i 38 to 575 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DA312484 hippocampus .i 40 to 587 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
BF031465 hypernephroma, Kidney .i 42 to 718 1 to 667       667/668
(99 %)
16 diff
(97.7 %id)
BX403837 neuroblastoma .i 43 to 1120 1 to 1071 exact tiling clone,   1071/1138
(94 %)
13 diff
(98.9 %id)
CD673745 eye, lens .i 43 to 593 1 to 551       551/551
(100 %)
0 diff
(100 %id)
BU860413 adenocarcinoma, cell line, breast .i 45 to 662 1 to 619       619/956
(64 %)
3 diff
(99.7 %id)
CD690576 normal nasopharynx .i 46 to 407 1 to 362       362/362
(100 %)
3 diff
(99.2 %id)
CD703186 normal nasopharynx .i 46 to 638 1 to 593       593/593
(100 %)
3 diff
(99.5 %id)
DB456715 testis .i 46 to 533 1 to 488       488/488
(100 %)
2 diff
(99.6 %id)
DB506415 hypothalamus .i 46 to 523 1 to 478       478/478
(100 %)
1 diff
(99.8 %id)
BP351567   .i 47 to 649 1 to 603       603/603
(100 %)
2 diff
(99.7 %id)
DB041046 testis .i 47 to 601 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
BM918387 pooled pancreas and spleen .i 48 to 577 1 to 533       533/1155
(46 %)
9 diff
(99.3 %id)
BM926130 brain .i 48 to 724 1 to 678       678/1127
(60 %)
10 diff
(99.2 %id)
BU838600 epidermoid carcinoma, cell line, salivary gland .i 48 to 724 1 to 677       677/968
(69 %)
12 diff
(98.8 %id)
BU944017 adenocarcinoma, cell line, breast .i 48 to 521 1 to 474       474/491
(96 %)
7 diff
(98.6 %id)
DA748895   .i 49 to 621 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BU784147 insulinoma, Pancreas .i 52 to 593 1 to 542       542/542
(100 %)
5 diff
(99.1 %id)
AA311901   .i 55 to 575 1 to 523       523/530
(98 %)
3 diff
(99.5 %id)
BE514217 Burkitt lymphoma, lymph .i 55 to 593 28 to 565       538/565
(95 %)
7 diff
(98.8 %id)
BF131890 hypernephroma, Kidney .i 56 to 662 1 to 600       602/831
(72 %)
28 diff
(96.7 %id)
C06134   .i 60 to 472 1 to 414       414/414
(100 %)
3 diff
(99.3 %id)
BE255843 eye, retinoblastoma .i 62 to 703 1 to 638       638/674
(94 %)
13 diff
(98.1 %id)
BE254782 eye, retinoblastoma .i 62 to 632 1 to 571       571/571
(100 %)
0 diff
(100 %id)
BE387981 endometrium, adenocarcinoma cell line, uterus .i 62 to 717 1 to 650       650/692
(93 %)
17 diff
(97.6 %id)
BE388980 endometrium, adenocarcinoma cell line, uterus .i 62 to 660 1 to 598       598/604
(99 %)
7 diff
(98.9 %id)
AA180100   .i 67 to 545 1 to 477       477/478
(99 %)
11 diff
(97.7 %id)
BM469274 lymph, lymphoma, cell line .i 67 to 662 1 to 597       597/1024
(58 %)
2 diff
(99.9 %id)
CN414181 embryonic stem cells, cell lines H1, H7, andH9 .i 68 to 711 1 to 644       644/644
(100 %)
1 diff
(99.9 %id)
CN414182 embryonic stem cells, cell lines H1, H7, andH9 .i 69 to 542 1 to 475       475/475
(100 %)
1 diff
(99.8 %id)
AA309133 colon .i 71 to 315 1 to 248       248/248
(100 %)
3 diff
(98.8 %id)
TI_154138614   .i 74 to 579 86 to 591       506/506
(100 %)
0 diff
(100 %id)
BE388298 endometrium, adenocarcinoma cell line, uterus .i 79 to 679 1 to 600       600/600
(100 %)
2 diff
(99.7 %id)
BE384056 melanotic melanoma, skin .i 79 to 656 1 to 578       578/579
(99 %)
1 diff
(99.9 %id)
AI362959 anaplastic oligodendroglioma, brain .i 83 to 197 115 to 1       115/115
(100 %)
0 diff
(100 %id)
FN125879 breast carcinoma .i 94 to 156 63 to 1     Submitted on the opposite strand 63/64
(98 %)
1 diff
(98.5 %id)
BM754319 stomach .i 148 to 359 1 to 212       212/212
(100 %)
1 diff
(99.6 %id)
M79222   .i 158 to 562 1 to 406       406/406
(100 %)
2 diff
(99.6 %id)
T04958   .i 160 to 404 1 to 248       248/296
(83 %)
10 diff
(96.7 %id)
TI_652739944   .i 192 to 573 24 to 404   fully sequenced, Submitted on the opposite strand 381/404
(94 %)
6 diff
(98.6 %id)
FN063928 breast carcinoma .i 435 to 526 1 to 92       92/92
(100 %)
1 diff
(99.0 %id)
TI_652739943   .i 458 to 575 147 to 29   fully sequenced, Submitted on the opposite strand 118/146
(80 %)
0 diff
(100 %id)
BE719321 head_neck .i 492 to 662 206 to 36       171/206
(83 %)
1 diff
(99.6 %id)
TI_149308571   .i 1000 to 1645 752 to 107   AAA   646/938
(68 %)
0 diff
(100 %id)
BM979757 lung, Primary Lung Epithelial Cells .i 1000 to 1645 664 to 19   tiling clone, AAA   646/659
(98 %)
0 diff
(100 %id)
BU783875 insulinoma, Pancreas .i 1773 to 2390 636 to 19   tiling clone, AAA   618/618
(100 %)
0 diff
(100 %id)
AA180163   .i 1843 to 2393 568 to 1       568/568
(100 %)
15 diff
(97.4 %id)
AU150064   .i 1883 to 2393 506 to 1       506/509
(99 %)
21 diff
(95.9 %id)
DB577713 hypothalamus .i 1904 to 2392 1 to 489     Submitted on the opposite strand 489/490
(99 %)
10 diff
(98.0 %id)
AI627429 pooled germ cell tumors .i 1913 to 2390 478 to 1       478/478
(100 %)
9 diff
(98.2 %id)
AU160000   .i 1915 to 2354 439 to 1       439/439
(100 %)
9 diff
(98.0 %id)
N20080.
matches multiple genes
melanocyte .i 1927 to 2390 464 to 1     also hits gene CHTF8 464/465
(99 %)
2 diff
(99.6 %id)
DB536411 hippocampus .i 1934 to 2392 1 to 459     Submitted on the opposite strand 459/459
(100 %)
0 diff
(100 %id)
BG619879 placenta .i 1981 to 2392 1 to 412   AAA   412/412
(100 %)
0 diff
(100 %id)
AI174596   .i 2013 to 2399 399 to 13   AAA   387/387
(100 %)
1 diff
(99.8 %id)
AI223272   .i 2017 to 2399 393 to 11   tiling clone, AAA   383/383
(100 %)
0 diff
(100 %id)
D59306   .i 2152 to 2399 248 to 1       248/248
(100 %)
0 diff
(100 %id)
BI832190 brain, medulla .j 1 to 636 35 to 670 T2I tiling clone,   636/672
(94 %)
8 diff
(98.9 %id)
TI_57175194   .j 1 to 636 35 to 670 T2I     636/672
(94 %)
8 diff
(98.9 %id)
BP371040 testis .k 1 to 587 1 to 586   tiling clone,   586/586
(100 %)
1 diff
(99.9 %id)
BI025063 marrow .l 1 to 351 1 to 356   tiling clone,   356/356
(100 %)
9 diff
(97.5 %id)
DB151315 thymus .l 23 to 588 2 to 567   tiling clone, capped   566/566
(100 %)
0 diff
(100 %id)
AK126024 testis .l 194 to 3436 1 to 3243 exact tiling clone, available from FLJ,   3243/3243
(100 %)
0 diff
(100 %id)
DB082458 testis .l 195 to 741 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DW442876 Liver .l 1036 to 1252 17 to 233       217/233
(93 %)
6 diff
(97.5 %id)
DA271065 caudate nucleus .l 1124 to 1679 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
AA836683 germinal center B cell .l 2535 to 3025 491 to 2       490/491
(99 %)
2 diff
(99.6 %id)
W06890 lung .l 2717 to 3067 1 to 357   fully sequenced,   355/355
(100 %)
4 diff
(98.9 %id)
TI_227713239   .l 2723 to 3443 798 to 79   AAA   720/974
(73 %)
3 diff
(99.7 %id)
BX456056 T cells (Jurkat cell line) .l 2725 to 3426 704 to 7       698/783
(89 %)
12 diff
(98.5 %id)
R16660 liver and spleen .l 2725 to 3067 1 to 343       343/343
(100 %)
3 diff
(99.2 %id)
TI_149299360   .l 2725 to 3436 771 to 62   AAA   710/819
(86 %)
20 diff
(97.6 %id)
BQ020168 Chondrosarcoma, Left Pubic Bone .l 2727 to 3438 730 to 19   AAA   712/712
(100 %)
0 diff
(100 %id)
BM981048 lung, Primary Lung Cystic Fibrosis EpithelialCells .l 2729 to 3436 726 to 19   AAA   708/708
(100 %)
0 diff
(100 %id)
BF732914 fibrotheoma, ovary .l 2739 to 3438 697 to 1       697/697
(100 %)
9 diff
(98.8 %id)
BG054661 Kidney .l 2751 to 3436 689 to 4       686/689
(99 %)
3 diff
(99.6 %id)
CA310191 Alveolar Macrophage, lung .l 2757 to 3436 698 to 19   AAA   680/680
(100 %)
0 diff
(100 %id)
BU677255 lung, Primary Lung Epithelial Cells .l 2759 to 3436 696 to 19   AAA   678/678
(100 %)
0 diff
(100 %id)
CA309574 Alveolar Macrophage, lung .l 2759 to 3436 692 to 17   AAA   676/676
(100 %)
3 diff
(99.6 %id)
CD367563 Alveolar Macrophage, lung .l 2759 to 3443 702 to 19   AAA   684/684
(100 %)
2 diff
(99.8 %id)
BU615585 Bone, Enchondroma cell line .l 2760 to 3436 695 to 19   AAA   677/677
(100 %)
0 diff
(100 %id)
AI655532 pooled germ cell tumors .l 2761 to 3438 690 to 12   AAA   679/680
(99 %)
9 diff
(98.7 %id)
AI765320 2 pooled tumors (clear cell type), Kidney .l 2763 to 3445 687 to 5       683/688
(99 %)
8 diff
(98.9 %id)
BM791845 Ascites, stomach .l 2763 to 3409 1 to 647       647/647
(100 %)
0 diff
(100 %id)
AI623241 pooled germ cell tumors .l 2764 to 3438 685 to 9       677/685
(98 %)
5 diff
(99.3 %id)
BM976737 lung, Primary Lung Cystic Fibrosis EpithelialCells .l 2766 to 3436 689 to 19   AAA   671/671
(100 %)
1 diff
(99.9 %id)
BM671023 eye, optic nerve .l 2770 to 3437 686 to 19   AAA   668/668
(100 %)
1 diff
(99.9 %id)
AI857816 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .l 2775 to 3444 677 to 8       670/677
(98 %)
7 diff
(99.0 %id)
AI656666 pooled germ cell tumors .l 2784 to 3437 671 to 20   AAA   652/652
(100 %)
9 diff
(98.7 %id)
AW009357 colon .l 2784 to 3437 664 to 11   AAA   654/654
(100 %)
15 diff
(97.8 %id)
TI_154132484   .l 2787 to 3439 762 to 106   AAA   657/922
(71 %)
15 diff
(98.4 %id)
AI985004 Kidney .l 2793 to 3436 663 to 14   AAA   650/658
(98 %)
25 diff
(96.3 %id)
BE502484 pooled germ cell tumors .l 2794 to 3438 653 to 9       645/657
(98 %)
23 diff
(96.5 %id)
BP369835 testis .l 2794 to 3370 1 to 578       578/580
(99 %)
27 diff
(95.4 %id)
AI202125 anaplastic oligodendroglioma, brain .l 2798 to 3436 638 to 1       638/640
(99 %)
15 diff
(97.7 %id)
AI652273 pooled germ cell tumors .l 2798 to 3436 638 to 1       638/661
(96 %)
9 diff
(98.7 %id)
AI990914 pooled germ cell tumors .l 2802 to 3420 619 to 1       619/619
(100 %)
4 diff
(99.4 %id)
AI828078 anaplastic oligodendroglioma, brain .l 2805 to 3437 642 to 10       633/642
(98 %)
0 diff
(100 %id)
BE139549 serous papillary carcinoma, high grade, 2pooled tumors, uterus .l 2805 to 3436 632 to 2       631/635
(99 %)
11 diff
(98.3 %id)
AI937025 anaplastic oligodendroglioma, brain .l 2808 to 3436 629 to 2       628/629
(99 %)
9 diff
(98.6 %id)
AW439665 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .l 2808 to 3438 644 to 17   AAA   628/628
(100 %)
8 diff
(98.8 %id)
BE671845 pooled germ cell tumors .l 2808 to 3437 630 to 2       629/630
(99 %)
7 diff
(98.9 %id)
AW418511 2 pooled tumors (clear cell type), Kidney .l 2817 to 3445 632 to 5   tiling clone,   628/632
(99 %)
13 diff
(98.0 %id)
BE501044 pooled germ cell tumors .l 2823 to 3436 618 to 6       613/618
(99 %)
7 diff
(98.9 %id)
AI928245 Kidney .l 2838 to 3436 621 to 23   AAA   599/599
(100 %)
4 diff
(99.4 %id)
AI991811 Prostate .l 2847 to 3439 597 to 4       594/597
(99 %)
18 diff
(97.0 %id)
N23805 melanocyte .l 2850 to 3267 1 to 423       423/506
(83 %)
7 diff
(98.7 %id)
N23809.
matches multiple genes
melanocyte .l 2850 to 3529 1 to 708   tiling clone, also hits gene MAK16 708/712
(99 %)
27 diff
(96.3 %id)
N40288 melanocyte .l 2850 to 3332 1 to 492       492/494
(99 %)
12 diff
(97.6 %id)
BQ001869 Fibrosarcoma .l 2853 to 3437 603 to 19   AAA   585/585
(100 %)
0 diff
(100 %id)
CA306087 Alveolar Macrophage, lung .l 2853 to 3440 607 to 19   AAA   589/589
(100 %)
1 diff
(99.9 %id)
AI887788 serous papillary carcinoma, high grade, 2pooled tumors, uterus .l 2856 to 3438 582 to 2       581/582
(99 %)
2 diff
(99.7 %id)
AW590546 pooled germ cell tumors .l 2868 to 3075 208 to 1       208/208
(100 %)
12 diff
(94.3 %id)
BM691523 eye, RPE and Choroid .l 2870 to 3291 8 to 429       422/429
(98 %)
6 diff
(98.7 %id)
AW874586 tumor, uterus .l 2877 to 3075 199 to 1       199/199
(100 %)
1 diff
(99.5 %id)
CF142196 lymph .l 2882 to 3316 1 to 435       435/435
(100 %)
4 diff
(99.1 %id)
AI651076 pooled germ cell tumors .l 2883 to 3438 556 to 1       556/556
(100 %)
0 diff
(100 %id)
BE672657 carcinoid, lung .l 2883 to 3438 571 to 16   AAA   556/556
(100 %)
0 diff
(100 %id)
AA788748 parathyroid gland, parathyroid tumor .l 2884 to 3437 559 to 8       552/560
(98 %)
9 diff
(98.4 %id)
AI656918 pooled germ cell tumors .l 2886 to 3438 575 to 23   AAA   553/556
(99 %)
4 diff
(99.3 %id)
BE466827 pooled germ cell tumors .l 2886 to 3438 553 to 1       553/553
(100 %)
6 diff
(99.0 %id)
TI_154173069   .l 2889 to 3438 80 to 631       552/589
(93 %)
4 diff
(99.4 %id)
AA599324 bone marrow stroma .l 2895 to 3436 558 to 17   AAA   542/542
(100 %)
6 diff
(98.9 %id)
AA933731 pooled germ cell tumors .l 2898 to 3438 541 to 1       541/541
(100 %)
15 diff
(97.3 %id)
AI376634 pooled .l 2898 to 3438 545 to 4       542/545
(99 %)
2 diff
(99.7 %id)
AI968091 pooled germ cell tumors .l 2898 to 3436 539 to 1       539/539
(100 %)
1 diff
(99.9 %id)
AA633784   .l 2903 to 3385 480 to 1       480/480
(100 %)
5 diff
(99.0 %id)
AA809343 germinal center B cell .l 2907 to 3437 556 to 31   AAA   526/526
(100 %)
8 diff
(98.5 %id)
AI656434 pooled germ cell tumors .l 2910 to 3436 525 to 1       525/525
(100 %)
7 diff
(98.7 %id)
DB340910 testis .l 2910 to 3436 527 to 1       527/527
(100 %)
0 diff
(100 %id)
CR616830 Neuroblastoma Cot 25-normalized .l 2912 to 3438 1 to 527       527/527
(100 %)
0 diff
(100 %id)
BX351148 Neuroblastoma Cot 25-normalized .l 2912 to 3437 524 to 1       524/524
(100 %)
8 diff
(98.5 %id)
BX354788 Neuroblastoma Cot 25-normalized .l 2912 to 3405 495 to 1       495/495
(100 %)
16 diff
(96.8 %id)
BX354789 Neuroblastoma Cot 25-normalized .l 2912 to 3438 1 to 526       526/526
(100 %)
2 diff
(99.7 %id)
BE858046 brain, glioblastoma (pooled) .l 2912 to 3437 526 to 1       526/526
(100 %)
0 diff
(100 %id)
AI770162 2 pooled tumors (clear cell type), Kidney .l 2913 to 3437 536 to 12   AAA   525/525
(100 %)
3 diff
(99.5 %id)
BE221000 carcinoid, lung .l 2921 to 3075 156 to 1       156/157
(99 %)
6 diff
(96.2 %id)
BE501090 pooled germ cell tumors .l 2925 to 3438 519 to 6       514/519
(99 %)
0 diff
(100 %id)
DB545609 hippocampus .l 2936 to 3434 1 to 499     Submitted on the opposite strand 499/501
(99 %)
3 diff
(99.5 %id)
BP393784 pancreatic islet .l 2938 to 3436 1 to 500     Submitted on the opposite strand 500/500
(100 %)
2 diff
(99.6 %id)
BP392601 pancreatic islet .l 2939 to 3439 1 to 501     Submitted on the opposite strand 501/501
(100 %)
0 diff
(100 %id)
AI341915 pooled germ cell tumors .l 2949 to 3444 499 to 4       496/499
(99 %)
0 diff
(100 %id)
AI127261 heart .l 2958 to 3438 484 to 4       481/484
(99 %)
0 diff
(100 %id)
DB522142 testis .l 2966 to 3436 1 to 471   AAA Submitted on the opposite strand 471/471
(100 %)
0 diff
(100 %id)
BE714184 head_neck .l 2971 to 3203 233 to 1       233/233
(100 %)
1 diff
(99.6 %id)
AA974216 pooled germ cell tumors .l 2974 to 3387 414 to 1       414/415
(99 %)
0 diff
(100 %id)
BF739881 Kidney .l 2979 to 3439 479 to 18   AAA   462/462
(100 %)
2 diff
(99.6 %id)
BF223716 pooled germ cell tumors .l 2979 to 3438 460 to 1       460/460
(100 %)
0 diff
(100 %id)
N70885 lung .l 3037 to 3437 399 to 1   fully sequenced,   399/399
(100 %)
4 diff
(99.0 %id)
DB307014 caudate nucleus .l 3644 to 4182 540 to 1   tiling clone,   540/540
(100 %)
2 diff
(99.7 %id)
BG011859 placenta_normal .m 1 to 420 428 to 2   tiling clone,   427/428
(99 %)
0 diff
(100 %id)
DB021800 testis .m 173 to 716 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
DB030369 testis .m 173 to 763 2 to 592 exact tiling clone, capped   591/591
(100 %)
0 diff
(100 %id)
DB450374 testis .m 176 to 636 1 to 461       461/461
(100 %)
5 diff
(99.0 %id)
DB027864 testis .n 1 to 592 2 to 593   capped   592/592
(100 %)
1 diff
(99.9 %id)
DB031748 testis .n 1 to 563 2 to 564   tiling clone, capped   563/563
(100 %)
0 diff
(100 %id)
DB044329 testis .n 1 to 550 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB045307 testis .n 1 to 559 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DB044532 testis .n 8 to 556 2 to 553   capped   552/552
(100 %)
4 diff
(99.3 %id)
DB042499 testis .n 22 to 575 2 to 558   capped   557/557
(100 %)
4 diff
(99.3 %id)
DB040519 testis .n 28 to 579 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
BM559827 brain, medulla .n 35 to 743 1 to 714 S46P N55E F56L L57S I58Y ... tiling clone,   714/1100
(64 %)
16 diff
(98.6 %id)
DB045283 testis .n 40 to 604 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
BP370407 testis .n 156 to 725 1 to 570   tiling clone,   570/570
(100 %)
3 diff
(99.5 %id)
DB130768 thymus .o 1 to 313 2 to 315 exact tiling clone, capped   314/314
(100 %)
1 diff
(99.7 %id)
AK055170 tongue, tumor tissue .p-u 1 to 2663 2 to 2666 exact tiling clone, available from FLJ,   2666/2666
(100 %)
6 diff
(99.8 %id)
DA434196 tongue, tumor tissue .p-u 1 to 491 2 to 492 exact capped   491/491
(100 %)
1 diff
(99.8 %id)
AA346748 heart .p-u 75 to 365 1 to 290       290/290
(100 %)
2 diff
(99.4 %id)
BX436351 thymus .p-u 173 to 803 1 to 631   tiling clone,   631/827
(76 %)
13 diff
(98.5 %id)
AA287656 germinal center B cell .p-u 448 to 815 11 to 378     Submitted on the opposite strand 368/378
(97 %)
6 diff
(98.5 %id)
AW376242 colon .p-u 480 to 680 205 to 8       198/205
(96 %)
10 diff
(95.2 %id)
DB129934 thymus .p-u 752 to 1132 2 to 382   capped   381/571
(66 %)
2 diff
(99.7 %id)
DB123102 thymus .p-u 802 to 1375 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
W92898 liver and spleen .p-u 909 to 1340 432 to 1     Submitted on the opposite strand 432/433
(99 %)
0 diff
(100 %id)
CX753976 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .p-u 916 to 1563 45 to 692       648/692
(93 %)
6 diff
(99.2 %id)
R98091 liver and spleen .p-u 971 to 1341 374 to 1     Submitted on the opposite strand 374/374
(100 %)
5 diff
(98.7 %id)
BF997748 placenta_normal .p-u 1019 to 1165 1 to 146       146/151
(96 %)
2 diff
(98.7 %id)
BF897092 marrow .p-u 1233 to 1596 367 to 6     Submitted on the opposite strand 362/367
(98 %)
0 diff
(100 %id)
Z42592 brain, total brain .p-u 1305 to 1622 1 to 319       319/319
(100 %)
2 diff
(99.4 %id)
F05854 brain, total brain .p-u 1306 to 1622 1 to 317       317/317
(100 %)
0 diff
(100 %id)
R51137 whole brain .p-u 1307 to 1769 1 to 464       464/464
(100 %)
5 diff
(99.0 %id)
H19131 whole brain .p-u 1307 to 1733 1 to 428       428/428
(100 %)
1 diff
(99.8 %id)
T33529 brain .p-u 1307 to 1723 1 to 417   tiling clone,   417/417
(100 %)
0 diff
(100 %id)
BI910311 leukocyte .p-u 1426 to 2097 1 to 673   tiling clone,   673/777
(86 %)
8 diff
(99.0 %id)
TI_57236187   .p-u 1426 to 2184 40 to 803   AAA   764/803
(95 %)
6 diff
(99.3 %id)
BX436350 thymus .p-u 1527 to 2632 1093 to 1       1093/1153
(94 %)
30 diff
(97.4 %id)
AA379617 skin .p-u 1611 to 1984 1 to 375       375/375
(100 %)
7 diff
(98.2 %id)
AW958387   .p-u 1612 to 2226 1 to 612       612/613
(99 %)
12 diff
(98.1 %id)
R96431 liver and spleen .p-u 1900 to 2250 1 to 355   tiling clone, fully sequenced,   355/355
(100 %)
0 diff
(100 %id)
N95588 multiple sclerosis lesions .p-u 1945 to 2316 1 to 368       368/463
(79 %)
5 diff
(99.0 %id)
DB313287 tongue, tumor tissue .p-u 2121 to 2663 545 to 1       545/545
(100 %)
3 diff
(99.5 %id)
AW590594 pooled germ cell tumors .p-u 2203 to 2663 461 to 1   tiling clone,   461/461
(100 %)
0 diff
(100 %id)
AW590641 pooled germ cell tumors .p-u 2205 to 2660 459 to 4       456/459
(99 %)
0 diff
(100 %id)
R96389 liver and spleen .p-u 2221 to 2659 439 to 1   fully sequenced,   439/439
(100 %)
11 diff
(97.5 %id)
H19132 whole brain .p-u 2324 to 2663 363 to 15   AAA   349/464
(75 %)
10 diff
(97.9 %id)
R51029 whole brain .p-u 2335 to 2663 356 to 16   AAA   341/355
(96 %)
16 diff
(95.5 %id)
Z38772 brain, total brain .p-u 2384 to 2663 280 to 1       280/280
(100 %)
0 diff
(100 %id)
F02097 brain, total brain .p-u 2461 to 2663 203 to 1       203/203
(100 %)
0 diff
(100 %id)
CX783953 human embryonic stem cells .q-u 1 to 676 1 to 676   tiling clone,   676/676
(100 %)
0 diff
(100 %id)
GD146883   .q-u 32 to 174 1 to 143   AAA   143/143
(100 %)
0 diff
(100 %id)
DA116888 cerebellum .q-u 394 to 926 2 to 534   tiling clone, capped   533/533
(100 %)
0 diff
(100 %id)
CN294392 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .q-u 959 to 1187 1 to 229   tiling clone,   229/229
(100 %)
3 diff
(98.7 %id)
BQ924478 sciatic nerve .r-u 1 to 855 1 to 857 exact tiling clone,   857/880
(97 %)
21 diff
(97.7 %id)
DB050491 testis .s 1 to 561 2 to 562 exact tiling clone, capped   561/561
(100 %)
2 diff
(99.7 %id)
DB034579 testis .s 111 to 687 2 to 579 V25X A26R R28K A29S V30C ... tiling clone, capped   578/578
(100 %)
1 diff
(99.9 %id)
DA318715 hippocampus .t-u 1 to 509 2 to 510 exact tiling clone, capped   509/509
(100 %)
0 diff
(100 %id)
AI806501 pooled .u-u 1 to 465 465 to 1 F10X tiling clone,   465/465
(100 %)
1 diff
(99.8 %id)
AW573273 pooled .u-u 21 to 465 445 to 1 exact     445/445
(100 %)
1 diff
(99.8 %id)
BF798157 colon_ins Gene RAE1, variant not shown              
BX457246 thymus Gene RAE1, variant not shown              
BX457247 thymus Gene RAE1, variant not shown              
CV399531 placenta_normal Gene RAE1, variant not shown              
AW291052   Gene RAE1, variant not shown              
DB141445 thymus Gene RAE1, variant not shown       capped      
195 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p-u, .q-u, .r-u, .s, .t-u, .u-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI