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Gene DENND5ATABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
452 supporting clones for gene DENND5A back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB459990 testis .a 1 to 448 1 to 448   tiling clone,   448/448
(100 %)
0 diff
(100 %id)
CT001090 T-Lymphocytes .a 30 to 428 1 to 399       399/429
(93 %)
3 diff
(99.4 %id)
BX401101   .a 51 to 1112 18 to 1078       1061/1078
(98 %)
1 diff
(100.0 %id)
DN999250   .a 58 to 577 1 to 520       520/520
(100 %)
5 diff
(99.1 %id)
NM_015213.2   .a 67 to 5031 1 to 4965   RefSeq,   4965/4965
(100 %)
0 diff
(100 %id)
CN302825 embryonic stem cells, cell lines H1, H7, andH9 .a 90 to 514 1 to 426       426/426
(100 %)
6 diff
(98.6 %id)
AB029014 brain .a 105 to 4352 1 to 4248   available from KIAA,   4248/4248
(100 %)
2 diff
(100.0 %id)
TI_44169215   .a 151 to 648 77 to 620       524/620
(84 %)
29 diff
(95.4 %id)
BI547853 brain, hippocampus .a 155 to 309 1 to 155       155/155
(100 %)
8 diff
(94.9 %id)
DR005320 Prostate .a 223 to 922 1 to 700       700/700
(100 %)
4 diff
(99.5 %id)
BE888811 leiomyosarcoma, uterus .a 297 to 982 1 to 685       685/1012
(67 %)
19 diff
(98.2 %id)
CN302823 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 302 to 695 1 to 394       394/394
(100 %)
1 diff
(99.8 %id)
DA339573 hippocampus .a 305 to 868 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
AL117448 uterus .a 309 to 5022 1 to 4714   tiling clone, available from DKFZ, AAA   4714/4714
(100 %)
0 diff
(100 %id)
DA212776 brain .a 330 to 854 2 to 526   capped   525/525
(100 %)
0 diff
(100 %id)
EH342728   .a 360 to 430 1 to 70       70/71
(98 %)
2 diff
(97.2 %id)
DA402139 thalamus .a 382 to 936 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
CN302822 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 383 to 1134 1 to 752       752/752
(100 %)
1 diff
(99.9 %id)
CN302827 embryonic stem cells, cell lines H1, H7, andH9 .a 400 to 901 1 to 502       502/502
(100 %)
1 diff
(99.9 %id)
DA333771 hippocampus .a 437 to 990 35 to 587   capped   553/586
(94 %)
1 diff
(99.9 %id)
DB277136 uterus .a 442 to 994 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
DA392026 thalamus .a 449 to 998 2 to 551   capped   550/550
(100 %)
3 diff
(99.5 %id)
DB062884 testis .a 456 to 995 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA247115 brain .a 510 to 1092 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
BQ706191 Spleen .a 521 to 1452 20 to 959       940/963
(97 %)
19 diff
(98.1 %id)
DA112597 cerebellum .a 522 to 1081 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
BG479703 choriocarcinoma, placenta .a 527 to 1243 1 to 728       728/913
(79 %)
37 diff
(96.0 %id)
BG774394 choriocarcinoma, placenta .a 527 to 1127 1 to 601       601/604
(99 %)
5 diff
(99.2 %id)
DA231359 brain .a 531 to 1066 2 to 537   capped   536/536
(100 %)
2 diff
(99.7 %id)
BF241164 bone marrow, from acute myelogenous leukemia .a 576 to 973 1 to 397       397/397
(100 %)
10 diff
(97.5 %id)
DA122067 cerebellum .a 589 to 1115 2 to 529   capped   528/528
(100 %)
1 diff
(99.9 %id)
DA093312 cerebellum .a 591 to 1157 2 to 568   capped   567/567
(100 %)
3 diff
(99.5 %id)
DA189696 amygdala .a 597 to 1133 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
DA243349 brain .a 597 to 1178 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
AK302478 testis .a 604 to 4566 1 to 3963       3963/3963
(100 %)
4 diff
(99.9 %id)
DC400566 testis .a 604 to 1149 1 to 546       546/546
(100 %)
0 diff
(100 %id)
DA229194 brain .a 605 to 1154 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA118105 cerebellum .a 616 to 1147 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
CK000788 mixed .a 639 to 1407 8 to 776       769/776
(99 %)
1 diff
(99.9 %id)
DA332471 hippocampus .a 677 to 1095 162 to 580   capped   419/579
(72 %)
0 diff
(100 %id)
DA233210 brain .a 682 to 1270 2 to 590   capped   589/596
(98 %)
3 diff
(99.5 %id)
DB072164 testis .a 721 to 1259 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
BM194304 leukopheresis .a 723 to 1221 1 to 499       499/499
(100 %)
2 diff
(99.6 %id)
BE739047 hypernephroma, Kidney .a 735 to 1106 1 to 372       372/380
(97 %)
3 diff
(99.3 %id)
CN302832 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 752 to 1298 1 to 548       548/548
(100 %)
3 diff
(99.5 %id)
BQ312057 breast_normal .a 793 to 963 185 to 13       173/196
(88 %)
0 diff
(100 %id)
DA102873 cerebellum .a 929 to 1473 2 to 546   capped   545/545
(100 %)
7 diff
(98.8 %id)
BM469532 embryonal carcinoma, cell line, testis .a 942 to 1610 1 to 668       668/1072
(62 %)
26 diff
(97.6 %id)
BG748153 eye, normal pigmented retinal epithelium .a 952 to 1776 1 to 827       827/828
(99 %)
5 diff
(99.4 %id)
DA807350 brain .a 979 to 1535 2 to 558   capped   557/560
(99 %)
2 diff
(99.7 %id)
DA321408 hippocampus .a 1057 to 1596 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA115292 cerebellum .a 1066 to 1602 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
BQ894287 brain, neuroblastoma, cell line .a 1122 to 2009 1 to 888       888/888
(100 %)
3 diff
(99.7 %id)
DA312362 hippocampus .a 1129 to 1696 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA331634 hippocampus .a 1132 to 1727 2 to 598   capped   597/597
(100 %)
1 diff
(99.9 %id)
AI907159 breast .a 1293 to 1972 723 to 45       679/735
(92 %)
12 diff
(98.4 %id)
DB068878 testis .a 1323 to 1876 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
BG763649 melanotic melanoma, high MDR (cell line), skin .a 1336 to 2179 1 to 846       843/846
(99 %)
21 diff
(97.6 %id)
BG764696 melanotic melanoma, high MDR (cell line), skin .a 1336 to 2224 1 to 876       876/883
(99 %)
30 diff
(96.7 %id)
BG769598 melanotic melanoma, high MDR (cell line), skin .a 1336 to 2219 1 to 879       879/908
(96 %)
61 diff
(93.3 %id)
BC009354 Skin, melanotic melanoma, high MDR. .a 1337 to 4352 1 to 3016   available from MGC, AAA   3016/3016
(100 %)
0 diff
(100 %id)
BG770796 melanotic melanoma, high MDR (cell line), skin .a 1338 to 1982 45 to 683       639/932
(68 %)
10 diff
(99.0 %id)
BQ954393 large cell carcinoma, lung .a 1340 to 1943 1 to 612       612/772
(79 %)
12 diff
(98.5 %id)
BQ878526 dorsal root ganglia .a 1365 to 2290 1 to 924       924/925
(99 %)
8 diff
(99.2 %id)
DA225085 brain .a 1375 to 1937 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB276814 uterus .a 1376 to 1921 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA100730 cerebellum .a 1409 to 1976 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA863096 placenta .a 1411 to 2046 2 to 637   capped   636/636
(100 %)
0 diff
(100 %id)
DA412767 thalamus .a 1418 to 1982 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB176854 kidney, tumor tissue .a 1439 to 1992 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
AK025499   .a 1454 to 5022 1 to 3569   available from FLJ, AAA   3569/3569
(100 %)
2 diff
(100.0 %id)
DA496670 brain .a 1455 to 2028 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
FN062868 breast carcinoma .a 1486 to 1547 62 to 1     Submitted on the opposite strand 62/63
(98 %)
0 diff
(100 %id)
AW900169 nervous_normal .a 1487 to 1776 11 to 303       293/318
(92 %)
17 diff
(94.7 %id)
BG329565 eye, retinoblastoma .a 1506 to 2196 1 to 697       694/1045
(66 %)
23 diff
(97.8 %id)
BM083896 eye, retinoblastoma .a 1506 to 2191 1 to 687       687/687
(100 %)
4 diff
(99.5 %id)
CA394624 eye, RPE/choroid .a 1542 to 1796 33 to 287       255/287
(88 %)
0 diff
(100 %id)
DB091057 testis .a 1553 to 2132 2 to 581   capped   580/580
(100 %)
2 diff
(99.7 %id)
TI_1948149693   .a 1562 to 2387 134 to 960       827/1434
(57 %)
22 diff
(98.5 %id)
TI_1948149694   .a 1562 to 2438 122 to 1002       881/1396
(63 %)
13 diff
(99.1 %id)
TI_1948149987   .a 1562 to 2338 131 to 910       780/1425
(54 %)
10 diff
(99.3 %id)
TI_1948149988   .a 1562 to 2472 122 to 1031       910/1341
(67 %)
8 diff
(99.5 %id)
TI_1948150285   .a 1562 to 2234 124 to 795       672/1387
(48 %)
9 diff
(99.4 %id)
TI_1948150286   .a 1562 to 2472 122 to 1031   AAA   910/1381
(65 %)
17 diff
(98.8 %id)
TI_1948150607   .a 1562 to 2289 129 to 856       728/1380
(52 %)
12 diff
(99.2 %id)
TI_1948150608   .a 1562 to 2377 120 to 932       813/1404
(57 %)
13 diff
(99.1 %id)
CV028307 mixed .a 1567 to 2197 1 to 631       631/631
(100 %)
7 diff
(98.9 %id)
AW629830 2 pooled high-grade transitional celltumors, genitourinary tract .a 1631 to 2202 1 to 572       572/572
(100 %)
6 diff
(99.0 %id)
DB469336 hippocampus .a 1670 to 2099 1 to 425       425/425
(100 %)
18 diff
(95.8 %id)
BF083318 colon .a 1684 to 2204 528 to 8       521/528
(98 %)
1 diff
(99.9 %id)
BF083271 colon .a 1689 to 2204 520 to 9       512/520
(98 %)
3 diff
(99.5 %id)
CN302826 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1693 to 2272 1 to 579       579/579
(100 %)
4 diff
(99.4 %id)
BM011798 brain, neuroblastoma, cell line .a 1732 to 2313 1 to 578       576/582
(98 %)
13 diff
(97.8 %id)
TI_59380973   .a 1733 to 2313 95 to 671       575/581
(98 %)
12 diff
(98.0 %id)
BQ070757 brain, neuroblastoma, cell line .a 1745 to 2604 1 to 866       866/1029
(84 %)
10 diff
(99.1 %id)
BU150714 brain, neuroblastoma, cell line .a 1745 to 2590 1 to 853       853/853
(100 %)
10 diff
(98.9 %id)
DA416465 thalamus .a 1752 to 2160 159 to 568   capped   410/567
(72 %)
0 diff
(100 %id)
CF136888 lymph .a 1764 to 2133 8 to 377       370/377
(98 %)
0 diff
(100 %id)
TI_154166191   .a 1764 to 2234 80 to 550       471/471
(100 %)
9 diff
(98.1 %id)
CX872217 embryonic stem .a 1772 to 2562 1 to 791       791/791
(100 %)
0 diff
(100 %id)
DA193646 amygdala .a 1777 to 2330 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
BI024980 marrow .a 1810 to 2211 1 to 405       405/405
(100 %)
4 diff
(99.1 %id)
CK001018 mixed .a 1812 to 2537 8 to 729       722/798
(90 %)
10 diff
(98.8 %id)
DB180951 kidney, tumor tissue .a 1846 to 2399 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
CN302829 embryonic stem cells, cell lines H1, H7, andH9 .a 1869 to 2464 1 to 594       594/594
(100 %)
2 diff
(99.7 %id)
BM174939 hippocampus .a 1874 to 2304 446 to 16       431/447
(96 %)
0 diff
(100 %id)
DA859739 placenta .a 1879 to 2480 2 to 603   capped   602/602
(100 %)
0 diff
(100 %id)
DA435964 tongue, tumor tissue .a 1885 to 2460 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
BI006217 kidney_tumor .a 1932 to 2223 296 to 5       292/296
(98 %)
0 diff
(100 %id)
DB143066 thymus .a 1948 to 2502 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA678216   .a 1974 to 2575 2 to 603   capped   602/602
(100 %)
0 diff
(100 %id)
AK026007   .a 1989 to 5022 1 to 3030   available from FLJ, AAA   3030/3030
(100 %)
3 diff
(100.0 %id)
DA782991 brain .a 1999 to 2560 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA579060   .a 2006 to 2564 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
BM550135 leukocyte .a 2017 to 2603 1 to 589       589/1096
(53 %)
7 diff
(99.4 %id)
BE179156 head_neck .a 2084 to 2792 708 to 4     Submitted on the opposite strand 705/718
(98 %)
20 diff
(97.3 %id)
DA020123   .a 2088 to 2642 2 to 558   capped   557/557
(100 %)
3 diff
(99.5 %id)
DB156085 thymus .a 2089 to 2681 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
BE179146 head_neck .a 2101 to 2758 693 to 32     Submitted on the opposite strand 662/693
(95 %)
15 diff
(97.9 %id)
TI_154186430   .a 2110 to 2778 116 to 780       665/783
(84 %)
11 diff
(98.6 %id)
R60710 whole brain .a 2125 to 2546 1 to 427       427/428
(99 %)
12 diff
(97.2 %id)
BE179176 head_neck .a 2127 to 2758 648 to 17     Submitted on the opposite strand 632/651
(97 %)
8 diff
(98.8 %id)
BE179160 head_neck .a 2136 to 2762 652 to 23     Submitted on the opposite strand 630/652
(96 %)
10 diff
(98.5 %id)
BE179173 head_neck .a 2144 to 2761 651 to 34     Submitted on the opposite strand 618/651
(94 %)
6 diff
(99.1 %id)
BQ650750 hepatocellular carcinoma, cell line, Liver .a 2196 to 2837 1 to 644       644/976
(65 %)
11 diff
(98.9 %id)
BQ645551 hepatocellular carcinoma, cell line, Liver .a 2197 to 3054 1 to 863       863/868
(99 %)
19 diff
(97.9 %id)
CO248576 Chondrosarcoma Lung Metastasis cell lines, lung .a 2244 to 2837 8 to 601       594/810
(73 %)
3 diff
(99.7 %id)
DA492353 brain .a 2255 to 2831 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
BM451422 eye, retinoblastoma .a 2256 to 2926 1 to 672       672/1122
(59 %)
6 diff
(99.5 %id)
AW608195 leiomios .a 2293 to 2805 1 to 514       512/515
(99 %)
3 diff
(99.5 %id)
DB466520 hippocampus .a 2321 to 2749 1 to 429       429/429
(100 %)
1 diff
(99.8 %id)
BU844555 ovary, teratocarcinoma, cell line .a 2344 to 3151 1 to 812       812/876
(92 %)
5 diff
(99.5 %id)
BU856130 ovary, teratocarcinoma, cell line .a 2344 to 3260 1 to 919       919/919
(100 %)
13 diff
(98.6 %id)
CN302821 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 2387 to 2802 10 to 426       417/426
(97 %)
1 diff
(99.8 %id)
BQ636738 eye, retina .a 2408 to 3005 1 to 597       597/604
(98 %)
1 diff
(99.9 %id)
BG330574 large cell carcinoma, lung .a 2429 to 3056 1 to 631       631/900
(70 %)
25 diff
(97.3 %id)
DA352552 substantia nigra .a 2460 to 3048 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
BQ878926 ductal carcinoma, cell line, Pancreas .a 2471 to 3374 1 to 905       905/906
(99 %)
7 diff
(99.3 %id)
BQ690492 ductal carcinoma, cell line, Pancreas .a 2471 to 3391 1 to 920       920/920
(100 %)
4 diff
(99.6 %id)
BE763271 nervous_tumor .a 2504 to 2689 30 to 209       180/210
(85 %)
8 diff
(96.2 %id)
DA885375   .a 2506 to 3072 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
CN399842 embryonic stem cells, DMSO-treated H9 cellline .a 2509 to 2720 1 to 212       212/212
(100 %)
0 diff
(100 %id)
CD251822 testis .a 2512 to 3182 29 to 700       672/886
(75 %)
5 diff
(99.5 %id)
BG326977 Kidney, renal cell adenocarcinoma .a 2532 to 2998 1 to 467       467/467
(100 %)
1 diff
(99.8 %id)
DA079211 cerebellum .a 2568 to 3139 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
BM720711 eye, fetal eye .a 2633 to 3326 1 to 693       693/706
(98 %)
7 diff
(99.1 %id)
BI113973 muscle, rhabdomyosarcoma .a 2634 to 3412 1 to 784       782/784
(99 %)
13 diff
(98.4 %id)
AW409996 muscle, rhabdomyosarcoma .a 2635 to 3262 27 to 654       628/654
(96 %)
0 diff
(100 %id)
AW498977 brain .a 2637 to 2804 1 to 169       169/169
(100 %)
1 diff
(99.5 %id)
T09336   .a 2637 to 2900 1 to 264       264/264
(100 %)
0 diff
(100 %id)
BE294973 muscle, rhabdomyosarcoma .a 2654 to 3056 1 to 404       404/404
(100 %)
1 diff
(99.8 %id)
BE294573 muscle, rhabdomyosarcoma .a 2654 to 3279 1 to 625       625/626
(99 %)
4 diff
(99.4 %id)
BE298127 muscle, rhabdomyosarcoma .a 2656 to 3324 1 to 671       671/786
(85 %)
26 diff
(96.7 %id)
CD656268 Embryonic Stem cells .a 2691 to 3497 12 to 817       806/834
(96 %)
10 diff
(98.9 %id)
DA937542 Spleen .a 2739 to 3343 2 to 606   capped   605/605
(100 %)
0 diff
(100 %id)
DA613739   .a 2748 to 3318 2 to 575   capped   574/577
(99 %)
6 diff
(99.0 %id)
BM013393 brain, neuroblastoma, cell line .a 2795 to 3568 1 to 778       778/926
(84 %)
15 diff
(98.4 %id)
TI_59380211   .a 2796 to 3704 99 to 1020       869/925
(93 %)
32 diff
(96.6 %id)
BE890523 melanotic melanoma, skin .a 2804 to 3456 1 to 652       652/654
(99 %)
3 diff
(99.6 %id)
CN302828 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2810 to 3457 13 to 660       648/660
(98 %)
0 diff
(100 %id)
BF982271 duodenal adenocarcinoma, cell line, small intestine .a 2815 to 3548 1 to 731       731/733
(99 %)
5 diff
(99.4 %id)
BF684314 leiomyosarcoma cell line, uterus .a 2833 to 3340 1 to 511       511/511
(100 %)
5 diff
(99.1 %id)
BG421828 Kidney, renal cell adenocarcinoma .a 2837 to 3565 1 to 725       725/759
(95 %)
22 diff
(97.2 %id)
BQ673860 epidermoid carcinoma, cell line, salivary gland .a 2840 to 3687 1 to 860       860/877
(98 %)
26 diff
(97.1 %id)
BQ670392 epidermoid carcinoma, cell line, salivary gland .a 2840 to 3620 1 to 785       785/868
(90 %)
17 diff
(98.1 %id)
BE276021 melanotic melanoma, skin .a 2869 to 3659 29 to 814       797/830
(96 %)
75 diff
(91.0 %id)
BC005100 Skin, melanotic melanoma. .a 2869 to 5022 1 to 2153   available from MGC, AAA   2153/2153
(100 %)
1 diff
(100.0 %id)
BI911547 leukocyte .a 2875 to 3545 25 to 696       670/696
(96 %)
2 diff
(99.8 %id)
TI_57232895   .a 2875 to 3545 25 to 696       670/696
(96 %)
2 diff
(99.8 %id)
BE277776 melanotic melanoma, skin .a 2888 to 3557 1 to 667       667/667
(100 %)
22 diff
(96.8 %id)
BE275536 melanotic melanoma, skin .a 2888 to 3543 1 to 651       651/765
(85 %)
16 diff
(98.0 %id)
BE383713 melanotic melanoma, skin .a 2888 to 3625 1 to 736   available from MGC,   736/959
(76 %)
17 diff
(98.3 %id)
BE729892 melanotic melanoma, skin .a 2889 to 3563 1 to 665       665/949
(70 %)
10 diff
(99.0 %id)
AW604663 colon .a 2946 to 3195 256 to 5       252/256
(98 %)
2 diff
(99.3 %id)
AW629843 2 pooled high-grade transitional celltumors, genitourinary tract .a 2955 to 3513 1 to 559       559/559
(100 %)
0 diff
(100 %id)
AW367939 head_neck .a 2973 to 3537 27 to 589       563/589
(95 %)
7 diff
(98.9 %id)
DA871069 Prostate .a 2975 to 3538 2 to 571   capped   570/570
(100 %)
8 diff
(98.6 %id)
BF304928 muscle, rhabdomyosarcoma .a 2990 to 3713 1 to 717       717/811
(88 %)
25 diff
(97.0 %id)
BI114263 muscle, rhabdomyosarcoma .a 2990 to 3444 1 to 458       458/588
(77 %)
6 diff
(99.0 %id)
BE295691 muscle, rhabdomyosarcoma .a 2993 to 3617 1 to 622       622/715
(86 %)
5 diff
(99.4 %id)
CN302819 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 3026 to 3789 1 to 764       764/764
(100 %)
1 diff
(99.9 %id)
DA830971 placenta .a 3046 to 3833 2 to 794   capped   793/839
(94 %)
15 diff
(98.3 %id)
DA269019 caudate nucleus .a 3066 to 3573 2 to 509   capped   508/508
(100 %)
1 diff
(99.9 %id)
BE297917 muscle, rhabdomyosarcoma .a 3069 to 3623 1 to 556       556/665
(83 %)
14 diff
(97.9 %id)
CN302820 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 3073 to 3667 1 to 595       595/595
(100 %)
2 diff
(99.7 %id)
CN302831 embryonic stem cells, cell lines H1, H7, andH9 .a 3078 to 3650 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DA367993 subthalamic nucleus .a 3081 to 3630 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
BE260987 brain, neuroblastoma .a 3106 to 3535 1 to 430       430/432
(99 %)
1 diff
(99.8 %id)
BQ940714 large cell carcinoma, lung .a 3115 to 4061 1 to 946       946/946
(100 %)
9 diff
(99.1 %id)
DA941305 Spleen .a 3116 to 3714 2 to 600   capped   599/601
(99 %)
5 diff
(99.2 %id)
CN302830 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 3136 to 3832 1 to 696       696/700
(99 %)
6 diff
(99.2 %id)
BE252717 eye, retinoblastoma .a 3138 to 3752 1 to 615       615/616
(99 %)
2 diff
(99.7 %id)
DA663652   .a 3175 to 3701 2 to 528   capped   527/527
(100 %)
0 diff
(100 %id)
DA598404   .a 3176 to 3742 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
BU553540 ovary, teratocarcinoma, cell line .a 3180 to 3996 1 to 822       822/899
(91 %)
13 diff
(98.6 %id)
TI_1948149695   .a 3180 to 4187 1125 to 126       1000/1282
(78 %)
18 diff
(98.6 %id)
TI_1948149989   .a 3182 to 4187 1123 to 125       999/1304
(76 %)
31 diff
(97.7 %id)
AA713760 breast, normal ductal tissue .a 3191 to 3412 1 to 222       222/250
(88 %)
4 diff
(98.4 %id)
CB269758 adipose .a 3195 to 3917 1 to 723       723/723
(100 %)
5 diff
(99.4 %id)
BM147647 leukopheresis .a 3290 to 3559 1 to 270       270/270
(100 %)
11 diff
(96.0 %id)
BM146951 leukopheresis .a 3290 to 3430 1 to 141       141/199
(70 %)
3 diff
(98.5 %id)
BM721990 eye, fetal eye .a 3307 to 3876 1 to 570       570/570
(100 %)
0 diff
(100 %id)
BG171870 hypernephroma, cell line, Kidney .a 3312 to 4001 1 to 686       686/866
(79 %)
8 diff
(99.1 %id)
TI_1948149990   .a 3318 to 4187 1006 to 124       834/1343
(62 %)
31 diff
(97.7 %id)
TI_1948150609   .a 3326 to 4187 981 to 123       859/1306
(65 %)
14 diff
(99.0 %id)
TI_1948150287   .a 3327 to 4187 984 to 124       861/1319
(65 %)
12 diff
(99.1 %id)
BG258354 embryonal carcinoma, cell line, testis .a 3330 to 4001 90 to 753       664/947
(70 %)
26 diff
(97.3 %id)
CX788305 human embryonic stem cells .a 3370 to 4187 1 to 818       818/818
(100 %)
1 diff
(99.9 %id)
F13003 brain, total brain .a 3372 to 3671 1 to 300       300/300
(100 %)
0 diff
(100 %id)
BU846173 ovary, teratocarcinoma, cell line .a 3384 to 4325 25 to 966       942/966
(97 %)
6 diff
(99.4 %id)
BU846153 ovary, teratocarcinoma, cell line .a 3393 to 4333 1 to 947       947/949
(99 %)
24 diff
(97.5 %id)
BU155999 melanotic melanoma, skin .a 3414 to 4254 1 to 842       842/842
(100 %)
2 diff
(99.8 %id)
TI_1948150610   .a 3438 to 4187 882 to 129       754/1368
(55 %)
11 diff
(99.2 %id)
TI_1948149696   .a 3442 to 4187 882 to 128       755/1394
(54 %)
35 diff
(97.5 %id)
BF973381 leiomyosarcoma cell line, uterus .a 3515 to 4316 1 to 794       794/973
(81 %)
18 diff
(98.2 %id)
DB485494 hypothalamus .a 3519 to 3914 19 to 413       395/413
(95 %)
4 diff
(99.1 %id)
BU932114 ovary, teratocarcinoma, cell line .a 3519 to 4366 1 to 850       850/850
(100 %)
2 diff
(99.8 %id)
CB131470 Liver .a 3519 to 3959 1 to 441       441/441
(100 %)
0 diff
(100 %id)
CR986337 T-Lymphocytes .a 3541 to 4405 1 to 865       865/865
(100 %)
2 diff
(99.8 %id)
BQ670079 epidermoid carcinoma, cell line, salivary gland .a 3552 to 4414 1 to 866       866/867
(99 %)
5 diff
(99.5 %id)
BE907546 epithelioid carcinoma, Pancreas .a 3562 to 4275 1 to 718       718/861
(83 %)
11 diff
(98.8 %id)
CN302818 embryonic stem cells, cell lines H1, H7, andH9 .a 3585 to 4374 3 to 793       791/793
(99 %)
8 diff
(99.0 %id)
CB113630 brain .a 3626 to 4000 1 to 376       376/383
(98 %)
4 diff
(99.0 %id)
TI_1948150288   .a 3626 to 4187 689 to 124       566/1398
(40 %)
19 diff
(98.7 %id)
BI596845 brain, hypothalamus .a 3627 to 4421 5 to 797       793/798
(99 %)
16 diff
(98.0 %id)
TI_45209183   .a 3627 to 4421 91 to 883       793/884
(89 %)
15 diff
(98.4 %id)
DB485598 hypothalamus .a 3629 to 4039 1 to 419       419/420
(99 %)
24 diff
(94.3 %id)
DB500233 hypothalamus .a 3629 to 4105 1 to 477       477/477
(100 %)
2 diff
(99.6 %id)
DB503009 hypothalamus .a 3629 to 4062 1 to 434       434/434
(100 %)
2 diff
(99.6 %id)
AA300883 testis .a 3638 to 3908 1 to 270       270/271
(99 %)
4 diff
(98.6 %id)
BM046897 carcinoma, cell line, Prostate .a 3668 to 4395 1 to 729       729/729
(100 %)
10 diff
(98.7 %id)
BI861576 breast, mammary adenocarcinoma, cell line .a 3687 to 4550 1 to 861       861/866
(99 %)
11 diff
(98.8 %id)
TI_57192504   .a 3687 to 4550 52 to 912       861/866
(99 %)
11 diff
(98.8 %id)
CD244883 White Matter .a 3703 to 4542 1 to 844       844/845
(99 %)
5 diff
(99.5 %id)
BE296081 muscle, rhabdomyosarcoma .a 3704 to 4394 1 to 689       689/691
(99 %)
7 diff
(99.0 %id)
BE259161 eye, retinoblastoma .a 3712 to 4304 20 to 625   available from MGC,   606/870
(69 %)
21 diff
(97.6 %id)
BC018797 Eye, retinoblastoma .a 3716 to 5022 1 to 1307   available from MGC, AAA   1307/1307
(100 %)
0 diff
(100 %id)
BG396771 eye, retinoblastoma .a 3725 to 4313 1 to 589       589/589
(100 %)
1 diff
(99.9 %id)
AW194123 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 3728 to 4352 625 to 1       625/626
(99 %)
3 diff
(99.6 %id)
AA022883 heart .a 3745 to 3907 1 to 163       163/168
(97 %)
1 diff
(99.5 %id)
AA349370 brain .a 3796 to 4213 1 to 419       419/419
(100 %)
1 diff
(99.8 %id)
AA349597 brain .a 3796 to 4210 1 to 415       415/415
(100 %)
0 diff
(100 %id)
AA349621 brain .a 3796 to 4188 1 to 393       393/393
(100 %)
0 diff
(100 %id)
F12648 brain, total brain .a 3796 to 4156 1 to 361       361/361
(100 %)
0 diff
(100 %id)
H17754 whole brain .a 3797 to 4260 1 to 466       466/578
(80 %)
4 diff
(99.4 %id)
AI372726   .a 3798 to 4186 1 to 389       389/389
(100 %)
0 diff
(100 %id)
R22764 whole brain .a 3801 to 4210 1 to 419       419/419
(100 %)
10 diff
(97.7 %id)
AW953132   .a 3811 to 4447 1 to 639       639/640
(99 %)
9 diff
(98.6 %id)
BF739793 brain, oligodendroglioma .a 3825 to 4180 356 to 1       356/376
(94 %)
28 diff
(92.6 %id)
BG231865 blood, lymphocyte .a 3826 to 4353 528 to 1       528/573
(92 %)
6 diff
(99.0 %id)
CK000764 mixed .a 3827 to 4622 1 to 788       788/791
(99 %)
16 diff
(98.0 %id)
BG770121 melanotic melanoma, high MDR (cell line), skin .a 3838 to 4648 1 to 809       809/810
(99 %)
5 diff
(99.4 %id)
AI085615 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3847 to 4353 511 to 5       507/511
(99 %)
0 diff
(100 %id)
BP397164 pancreatic islet .a 3857 to 4352 1 to 496     Submitted on the opposite strand 496/496
(100 %)
0 diff
(100 %id)
CF456870 peripheral nervous system .a 3886 to 4606 35 to 755       721/755
(95 %)
0 diff
(100 %id)
BF036919 adenocarcinoma, ovary .a 3908 to 4520 1 to 613       613/613
(100 %)
7 diff
(98.9 %id)
AA846845   .a 3913 to 4353 443 to 3       441/443
(99 %)
0 diff
(100 %id)
R60711 whole brain .a 3998 to 4348 361 to 8       354/471
(75 %)
0 diff
(100 %id)
AA922490 pooled germ cell tumors .a 4000 to 4172 175 to 3       173/175
(98 %)
0 diff
(100 %id)
TI_57219562   .a 4031 to 4823 26 to 823       798/823
(96 %)
0 diff
(100 %id)
BI752726 brain .a 4032 to 4823 1 to 797       797/797
(100 %)
12 diff
(98.5 %id)
AA463339 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 4068 to 4469 1 to 400       400/400
(100 %)
2 diff
(99.5 %id)
FN070462 breast carcinoma .a 4080 to 4173 1 to 94       94/94
(100 %)
0 diff
(100 %id)
BF577089 muscle (skeletal) .a 4080 to 4723 1 to 644       644/870
(74 %)
31 diff
(96.5 %id)
AW184016 pooled .a 4083 to 4550 470 to 3       468/470
(99 %)
0 diff
(100 %id)
BM424060 amelanotic melanoma, cell line, skin .a 4087 to 4787 27 to 737       711/1028
(69 %)
26 diff
(97.5 %id)
BX393241   .a 4181 to 5007 828 to 1       828/882
(93 %)
20 diff
(97.8 %id)
AA022884 heart .a 4204 to 4353 149 to 1       149/149
(100 %)
1 diff
(99.4 %id)
BM824670 Ascites, stomach .a 4301 to 4801 1 to 501       501/501
(100 %)
6 diff
(98.9 %id)
BE222707 brain, oligodendroglioma .a 4348 to 4665 1 to 319     Submitted on the opposite strand 319/330
(96 %)
11 diff
(96.7 %id)
W47275 senescent fibroblast .a 4375 to 4826 1 to 450       450/450
(100 %)
8 diff
(98.3 %id)
BE677148 dorsal root ganglia .a 4382 to 4832 454 to 1       454/454
(100 %)
23 diff
(95.0 %id)
BM794986 Ascites, stomach .a 4405 to 4513 1 to 109       109/109
(100 %)
5 diff
(95.5 %id)
BM678505 eye, fetal eye .a 4432 to 5026 609 to 15   tiling clone, AAA   595/595
(100 %)
0 diff
(100 %id)
DB376388 placenta .a 4437 to 5026 590 to 1       590/604
(97 %)
23 diff
(96.2 %id)
AW409997 muscle, rhabdomyosarcoma .a 4483 to 5026 571 to 28   AAA   544/544
(100 %)
0 diff
(100 %id)
AI479959 anaplastic oligodendroglioma, brain .a 4533 to 4832 300 to 1       300/300
(100 %)
0 diff
(100 %id)
AI749112 colon .a 4533 to 4832 299 to 1       299/299
(100 %)
6 diff
(98.0 %id)
AI627189 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 4534 to 4832 297 to 1       297/297
(100 %)
1 diff
(99.7 %id)
AI927774 adenocarcinoma, Pancreas .a 4551 to 4832 282 to 1       282/282
(100 %)
0 diff
(100 %id)
AW615313 2 pooled high-grade transitional celltumors, genitourinary tract .a 4553 to 4832 280 to 1       280/280
(100 %)
0 diff
(100 %id)
BM679411 eye, fetal eye .a 4558 to 5026 485 to 15   AAA   471/471
(100 %)
2 diff
(99.6 %id)
AI091224 pooled .a 4567 to 4832 266 to 1       266/266
(100 %)
0 diff
(100 %id)
AI087184 senescent fibroblast .a 4571 to 4832 262 to 1       262/262
(100 %)
0 diff
(100 %id)
AI494213 anaplastic oligodendroglioma, brain .a 4580 to 4832 253 to 1       253/253
(100 %)
0 diff
(100 %id)
AI139450 heart .a 4581 to 4832 252 to 1       252/252
(100 %)
0 diff
(100 %id)
N55721   .a 4604 to 4830 37 to 262       226/262
(86 %)
0 diff
(100 %id)
AI301842 2 pooled tumors (clear cell type), Kidney .a 4608 to 4832 225 to 1       225/225
(100 %)
0 diff
(100 %id)
AI828073 anaplastic oligodendroglioma, brain .a 4609 to 4832 224 to 1       224/224
(100 %)
2 diff
(99.2 %id)
AI093534 uterus .a 4626 to 4832 207 to 1       207/207
(100 %)
0 diff
(100 %id)
AI950283 pooled germ cell tumors .a 4628 to 4832 206 to 1       206/206
(100 %)
1 diff
(99.6 %id)
AI348324 carcinoid, lung .a 4630 to 4832 203 to 1       203/203
(100 %)
0 diff
(100 %id)
AI873456 pooled .a 4635 to 4832 198 to 1       198/198
(100 %)
1 diff
(99.5 %id)
H17641 whole brain .a 4637 to 4832 203 to 1       203/212
(95 %)
12 diff
(94.4 %id)
AI884617 anaplastic oligodendroglioma, brain .a 4637 to 4832 196 to 1       196/196
(100 %)
0 diff
(100 %id)
AI375155 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 4648 to 4832 185 to 1       185/185
(100 %)
0 diff
(100 %id)
AI401399 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 4665 to 4832 166 to 1       166/166
(100 %)
1 diff
(99.4 %id)
F10263 brain, total brain .a 4680 to 5026 347 to 1       347/347
(100 %)
0 diff
(100 %id)
AI198140 anaplastic oligodendroglioma, brain .a 4695 to 4832 138 to 1       138/138
(100 %)
0 diff
(100 %id)
AI208378   .a 4702 to 4832 131 to 1       131/131
(100 %)
0 diff
(100 %id)
F10598 brain, total brain .a 4752 to 5026 275 to 1       275/275
(100 %)
0 diff
(100 %id)
AK295881 hippocampus .b 1 to 4059 2 to 4060 E229Q Q934R M1003V tiling clone,   4060/4060
(100 %)
3 diff
(100.0 %id)
CA309194 Alveolar Macrophage, lung .b 3303 to 4009 725 to 19   AAA   707/707
(100 %)
0 diff
(100 %id)
DT220182 brain .b 3447 to 4032 1 to 585       585/585
(100 %)
3 diff
(99.5 %id)
AW770618 carcinoid, lung .b 3543 to 4012 470 to 1       470/470
(100 %)
0 diff
(100 %id)
R73938 breast .b 3654 to 4009 1 to 358       358/367
(97 %)
3 diff
(99.2 %id)
AK294016 cerebellum .c 1 to 2861 1 to 2861 exact tiling clone,   2861/2861
(100 %)
1 diff
(100.0 %id)
DC310394 cerebellum .c 1 to 512 1 to 512       512/512
(100 %)
1 diff
(99.9 %id)
DC325065 brain .c 118 to 663 1 to 546       546/546
(100 %)
1 diff
(99.9 %id)
BM720635 eye, fetal eye .c 2757 to 3539 1 to 779   tiling clone,   779/779
(100 %)
5 diff
(99.4 %id)
DB498043 hypothalamus .c 2997 to 3501 1 to 505   tiling clone,   505/505
(100 %)
3 diff
(99.5 %id)
BM679343 eye, fetal eye .c 3907 to 4399 507 to 15   tiling clone, AAA   493/493
(100 %)
1 diff
(99.8 %id)
BF798242 colon_ins .d 1 to 653 12 to 660   tiling clone,   649/662
(98 %)
18 diff
(97.3 %id)
AK125444 brain .d 118 to 3710 1 to 3593 exact tiling clone, available from FLJ,   3593/3593
(100 %)
3 diff
(100.0 %id)
DA794669 brain .d 119 to 686 2 to 569   capped   568/568
(100 %)
3 diff
(99.5 %id)
DA335902 hippocampus .d 664 to 1247 2 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
BF856783 prostate_tumor .d 781 to 1182 403 to 2     Submitted on the opposite strand 402/403
(99 %)
0 diff
(100 %id)
BF084971 placenta_normal .d 1476 to 1733 1 to 258       258/265
(97 %)
6 diff
(97.8 %id)
DB326664 brain .d 3164 to 3710 547 to 1       547/547
(100 %)
0 diff
(100 %id)
BI462180 testis .e 1 to 750 1 to 752   tiling clone,   752/961
(78 %)
12 diff
(98.8 %id)
BG719781 testis .e 576 to 1319 1 to 749   tiling clone,   753/749
(100 %)
13 diff
(98.3 %id)
TI_227713878   .f 1 to 811 899 to 93 G3X F55X tiling clone, AAA   807/997
(80 %)
6 diff
(99.4 %id)
CD364629 Alveolar Macrophage, lung .f 85 to 811 745 to 19   AAA   727/727
(100 %)
0 diff
(100 %id)
H06650 whole brain .f 149 to 538 1 to 400       400/435
(91 %)
16 diff
(96.4 %id)
T74538 whole brain .f 302 to 685 1 to 387       387/387
(100 %)
10 diff
(97.5 %id)
R55959 whole brain .f 316 to 692 1 to 384       384/388
(98 %)
15 diff
(96.2 %id)
H06585 whole brain .f 323 to 734 1 to 420       420/488
(86 %)
12 diff
(97.6 %id)
BM127030 Islets of Langerhans, Pancreas .f 407 to 910 1 to 504       504/504
(100 %)
0 diff
(100 %id)
BQ672442 epidermoid carcinoma, cell line, salivary gland .f 579 to 1485 1 to 913   AAA   913/913
(100 %)
17 diff
(98.2 %id)
W81527 heart .f 628 to 923 1 to 296       296/296
(100 %)
3 diff
(99.0 %id)
TI_154097781   .f 672 to 1485 888 to 86   AAA   803/805
(99 %)
17 diff
(97.9 %id)
CA307970 Alveolar Macrophage, lung .f 702 to 1485 792 to 15   AAA   778/779
(99 %)
8 diff
(99.0 %id)
TI_154115908   .f 744 to 1485 846 to 103   AAA   744/798
(93 %)
33 diff
(95.9 %id)
TI_151770502   .f 766 to 1481 109 to 826       718/1070
(67 %)
17 diff
(98.5 %id)
BY799174 eye .f 773 to 1393 1 to 621   tiling clone,   621/621
(100 %)
0 diff
(100 %id)
TI_154025849   .f 787 to 1485 768 to 80   AAA   689/792
(86 %)
13 diff
(98.4 %id)
BQ772990 Chondrosarcoma Cell line .f 798 to 1485 699 to 15   AAA   685/685
(100 %)
6 diff
(99.2 %id)
BU626593 Alveolar Macrophage, lung .f 825 to 1485 676 to 15   AAA   662/662
(100 %)
3 diff
(99.6 %id)
BQ000864 lung, Metastatic Chondrosarcoma .f 831 to 1485 668 to 15   AAA   654/654
(100 %)
4 diff
(99.4 %id)
BX385380   .f 832 to 1478 1 to 649   fully sequenced,   649/649
(100 %)
9 diff
(98.7 %id)
CA440880 lung, Metastatic Chondrosarcoma .f 834 to 1485 666 to 15   AAA   652/652
(100 %)
0 diff
(100 %id)
CA431976 Alveolar Macrophage, lung .f 835 to 1421 601 to 15   AAA   587/587
(100 %)
4 diff
(99.4 %id)
BQ772403 Chondrosarcoma Cell line .f 839 to 1485 660 to 15   AAA   646/646
(100 %)
4 diff
(99.4 %id)
BM040724 Kidney, Wilms' tumor, cell line .f 843 to 1446 1 to 606       606/858
(70 %)
4 diff
(99.6 %id)
CA440094 lung, Metastatic Chondrosarcoma .f 845 to 1485 651 to 15   AAA   637/637
(100 %)
6 diff
(99.1 %id)
BU624340 cell lines, Enchondroma .f 892 to 1485 614 to 19   AAA   596/596
(100 %)
3 diff
(99.5 %id)
BU732683 eye, optic nerve .f 897 to 1485 608 to 19   AAA   590/594
(99 %)
1 diff
(99.9 %id)
CD368056 Alveolar Macrophage, lung .f 900 to 1485 601 to 15   AAA   587/588
(99 %)
1 diff
(99.9 %id)
BQ001041 lung, Metastatic Chondrosarcoma .f 912 to 1485 589 to 15   AAA   575/575
(100 %)
2 diff
(99.7 %id)
BM126732 Islets of Langerhans, Pancreas .f 925 to 1485 562 to 1       562/562
(100 %)
4 diff
(99.3 %id)
BF345405 anaplastic oligodendroglioma with 1p/19qloss, brain .f 929 to 1481 1 to 550   AAA   550/550
(100 %)
3 diff
(99.5 %id)
CA449542 Chondrosarcoma, Left Pelvis .f 933 to 1485 567 to 15   AAA   553/553
(100 %)
1 diff
(99.9 %id)
BQ013644 placenta .f 938 to 1485 561 to 14   AAA   548/548
(100 %)
0 diff
(100 %id)
BE535642 cervix .f 968 to 1468 510 to 1     Submitted on the opposite strand 510/517
(98 %)
18 diff
(96.6 %id)
TI_157605023   .f 982 to 1485 601 to 98   AAA   504/505
(99 %)
2 diff
(99.7 %id)
DB550818 hippocampus .f 983 to 1485 1 to 503   AAA Submitted on the opposite strand 503/503
(100 %)
3 diff
(99.5 %id)
DB571380 hypothalamus .f 1010 to 1485 1 to 476     Submitted on the opposite strand 476/476
(100 %)
0 diff
(100 %id)
CF529591 placenta .f 1011 to 1485 493 to 19   AAA   475/475
(100 %)
1 diff
(99.8 %id)
BF240043 bone marrow, from chronic myelogenous leukemia .f 1016 to 1485 1 to 455   AAA   455/455
(100 %)
21 diff
(95.4 %id)
DB569137 hypothalamus .f 1020 to 1485 1 to 466     Submitted on the opposite strand 466/466
(100 %)
1 diff
(99.8 %id)
DB574201 hypothalamus .f 1024 to 1485 1 to 462     Submitted on the opposite strand 462/462
(100 %)
0 diff
(100 %id)
DB552013 hippocampus .f 1026 to 1485 1 to 460     Submitted on the opposite strand 460/460
(100 %)
0 diff
(100 %id)
DB526492 testis .f 1036 to 1485 1 to 450     Submitted on the opposite strand 450/450
(100 %)
0 diff
(100 %id)
DB554561 hypothalamus .f 1037 to 1485 1 to 448     Submitted on the opposite strand 448/448
(100 %)
3 diff
(99.4 %id)
DB520782 testis .f 1040 to 1485 1 to 446     Submitted on the opposite strand 446/446
(100 %)
0 diff
(100 %id)
BM145745 leukopheresis .f 1040 to 1481 461 to 20   AAA   442/447
(98 %)
10 diff
(97.8 %id)
DB530030 hippocampus .f 1045 to 1485 1 to 441     Submitted on the opposite strand 441/441
(100 %)
17 diff
(96.2 %id)
BF515451   .f 1054 to 1485 445 to 14   AAA   432/432
(100 %)
1 diff
(99.8 %id)
H06530 whole brain .f 1064 to 1485 454 to 22   AAA   433/438
(98 %)
16 diff
(96.4 %id)
DB508727 testis .f 1067 to 1485 1 to 420     Submitted on the opposite strand 420/420
(100 %)
15 diff
(96.5 %id)
BM144829 leukopheresis .f 1067 to 1481 435 to 21   AAA   415/415
(100 %)
3 diff
(99.3 %id)
AA349595 brain .f 1076 to 1485 409 to 1       409/409
(100 %)
1 diff
(99.8 %id)
AA349619 brain .f 1076 to 1485 409 to 1       409/409
(100 %)
2 diff
(99.6 %id)
W81528 heart .f 1098 to 1485 394 to 1       394/394
(100 %)
6 diff
(98.5 %id)
AA349620 brain .f 1114 to 1485 373 to 1       373/373
(100 %)
4 diff
(99.0 %id)
DB533310 hippocampus .f 1114 to 1485 8 to 381     Submitted on the opposite strand 374/381
(98 %)
2 diff
(99.5 %id)
DB531216 hippocampus .f 1119 to 1485 1 to 369     Submitted on the opposite strand 369/369
(100 %)
18 diff
(95.2 %id)
BM145976 leukopheresis .f 1127 to 1481 373 to 20   AAA   354/354
(100 %)
1 diff
(99.8 %id)
AI372725   .f 1132 to 1485 353 to 1       353/353
(100 %)
1 diff
(99.8 %id)
BX385379   .f 1139 to 1458 318 to 1   fully sequenced,   318/318
(100 %)
2 diff
(99.4 %id)
AA349596 brain .f 1140 to 1485 347 to 1       347/354
(98 %)
2 diff
(99.5 %id)
BU165905 melanotic melanoma, skin .f 1166 to 1490 22 to 346   tiling clone,   325/348
(93 %)
5 diff
(98.6 %id)
CK299047 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .f 1170 to 1485 335 to 19   AAA   317/326
(97 %)
2 diff
(99.4 %id)
TI_151809125   .f 1170 to 1485 79 to 394   fully sequenced, AAA   316/316
(100 %)
2 diff
(99.4 %id)
AA968438 pooled .f 1172 to 1485 354 to 41   AAA   314/314
(100 %)
7 diff
(97.8 %id)
AI370008   .f 1175 to 1446 274 to 3       272/274
(99 %)
0 diff
(100 %id)
R55960 whole brain .f 1181 to 1473 298 to 1       298/298
(100 %)
11 diff
(96.4 %id)
AW139219   .f 1193 to 1485 306 to 14   AAA   293/293
(100 %)
1 diff
(99.7 %id)
H06651 whole brain .f 1230 to 1490 270 to 5       266/275
(96 %)
0 diff
(100 %id)
AA522598 metastatic prostate bone lesion .f 1261 to 1490 239 to 10       230/245
(93 %)
0 diff
(100 %id)
AA522601 metastatic prostate bone lesion .f 1261 to 1480 239 to 20   AAA   220/228
(96 %)
1 diff
(99.6 %id)
EB386976 eye, optic nerve .f 1263 to 1481 1 to 219   AAA   219/219
(100 %)
0 diff
(100 %id)
AI581084 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .f 1265 to 1485 249 to 29   AAA   221/221
(100 %)
4 diff
(98.2 %id)
T89087 whole brain .f 1294 to 1490 200 to 4       197/200
(98 %)
0 diff
(100 %id)
AA779482   .f 1310 to 1488 180 to 2       179/180
(99 %)
0 diff
(100 %id)
AI632767 Kidney .f 1336 to 1490 159 to 5       155/159
(97 %)
0 diff
(100 %id)
AW027476 pooled germ cell tumors .f 1336 to 1485 150 to 1       150/150
(100 %)
0 diff
(100 %id)
BF940240 brain, glioblastoma (pooled) .f 1336 to 1481 146 to 1       146/146
(100 %)
0 diff
(100 %id)
BF447103 Prostate .f 1336 to 1485 164 to 15   AAA   150/150
(100 %)
2 diff
(98.7 %id)
BF115019 Kidney .f 1337 to 1457 1 to 121     Submitted on the opposite strand 121/121
(100 %)
0 diff
(100 %id)
CA433727 mixed .f 1355 to 1485 1 to 131   AAA Submitted on the opposite strand 131/131
(100 %)
4 diff
(97.0 %id)
AW196724 adenocarcinoma, Pancreas .f 1391 to 1485 107 to 13   AAA   95/95
(100 %)
0 diff
(100 %id)
FN067061 breast carcinoma .f 1394 to 1484 94 to 4     Submitted on the opposite strand 91/94
(96 %)
0 diff
(100 %id)
TI_151729740   .f 1410 to 1485 166 to 90   fully sequenced, AAA   77/77
(100 %)
1 diff
(98.8 %id)
DA509535 brain .g 1 to 565 2 to 565   tiling clone, capped   564/564
(100 %)
1 diff
(99.9 %id)
CB144271 brain .g 47 to 603 1 to 557   tiling clone,   557/557
(100 %)
1 diff
(99.9 %id)
BF893061 marrow .g 526 to 752 1 to 232   tiling clone,   232/232
(100 %)
17 diff
(92.7 %id)
BG006203 placenta_normal .h 1 to 515 13 to 525 F3W V4S I5S Q6N S8A ... tiling clone,   513/527
(97 %)
5 diff
(99.1 %id)
BQ367099 placenta_normal .h 122 to 592 471 to 3   tiling clone,   469/471
(99 %)
0 diff
(100 %id)
AK091148 tongue, tumor tissue .i 1 to 2605 2 to 2606 exact tiling clone, available from FLJ,   2606/2606
(100 %)
3 diff
(99.9 %id)
AX746807   .i 1 to 2605 2 to 2606 exact     2606/2606
(100 %)
3 diff
(99.9 %id)
DA436651 tongue, tumor tissue .i 1 to 561 2 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
DA904959   .i 158 to 708 2 to 553   tiling clone, capped   552/552
(100 %)
1 diff
(99.9 %id)
T04972   .i 675 to 903 1 to 229       229/229
(100 %)
7 diff
(97.0 %id)
DA403957 thalamus .i 803 to 1348 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
BF951381 nervous_normal .i 937 to 1358 20 to 439       420/439
(95 %)
0 diff
(100 %id)
DB313429 tongue, tumor tissue .i 2076 to 2605 531 to 1       531/531
(100 %)
1 diff
(99.9 %id)
CN302833 embryonic stem cells, cell lines H1, H7, andH9 .j 1 to 604 1 to 604 exact tiling clone,   604/604
(100 %)
0 diff
(100 %id)
DA222999 brain .k 1 to 529 2 to 530 exact tiling clone, capped   529/529
(100 %)
0 diff
(100 %id)
CN302824 embryonic stem cells, cell lines H1, H7, andH9 .k 42 to 563 1 to 521 Q10R D11I M12*     521/521
(100 %)
2 diff
(99.7 %id)
BF366477 nervous_tumor .k 339 to 581 243 to 1       243/243
(100 %)
0 diff
(100 %id)
CV333488 nervous_tumor .k 339 to 581 243 to 1     Submitted on the opposite strand 243/243
(100 %)
0 diff
(100 %id)
DA989830 synovial membrane tissue from rheumatioidarthritis .k 444 to 973 2 to 532   capped   531/531
(100 %)
1 diff
(99.9 %id)
DA110677 cerebellum .k 478 to 1036 2 to 561   tiling clone, capped   560/560
(100 %)
1 diff
(99.9 %id)
DA241984 brain .k 499 to 1075 2 to 578   tiling clone, capped   577/577
(100 %)
1 diff
(99.9 %id)
DA276409 corpus callosum .l 1 to 577 2 to 578   tiling clone, capped   577/577
(100 %)
3 diff
(99.5 %id)
BQ339788 nervous_normal .l 15 to 565 550 to 1   tiling clone,   550/550
(100 %)
7 diff
(98.8 %id)
DA216500 brain .l 465 to 957 2 to 494   tiling clone, capped   493/493
(100 %)
2 diff
(99.6 %id)
DB307209 corpus callosum .l 1500 to 2034 536 to 1   tiling clone,   536/536
(100 %)
2 diff
(99.7 %id)
BF726339 eye, lens .m 1 to 572 1 to 572 exact tiling clone,   572/572
(100 %)
1 diff
(99.9 %id)
CB052835 leiomyosarcoma, soft tissue .m 461 to 804 4 to 347   tiling clone, fully sequenced,   344/347
(99 %)
5 diff
(98.6 %id)
AI743218 pooled .m 718 to 1279 561 to 1   tiling clone,   561/561
(100 %)
3 diff
(99.5 %id)
AA527934   .m 738 to 1284 1 to 547   tiling clone, AAA   547/547
(100 %)
9 diff
(98.4 %id)
CB052834 leiomyosarcoma, soft tissue .m 774 to 1296 525 to 1   tiling clone, fully sequenced,   525/525
(100 %)
6 diff
(98.9 %id)
DR980091 placenta .m 1068 to 1248 184 to 4       181/192
(94 %)
0 diff
(100 %id)
AI918359 adenocarcinoma, Pancreas .m 1087 to 1280 194 to 1       194/194
(100 %)
1 diff
(99.5 %id)
BI016767 lung_tumor .m 1091 to 1306 40 to 253   tiling clone,   214/253
(84 %)
0 diff
(100 %id)
DR980090 placenta .m 1105 to 1248 146 to 4       143/152
(94 %)
0 diff
(100 %id)
DA307715 hippocampus .n-u 1 to 591 2 to 592 exact tiling clone, to resequence, capped   591/591
(100 %)
0 diff
(100 %id)
BE739814 hypernephroma, Kidney .n-u 1270 to 2056 806 to 24   tiling clone,   783/1008
(77 %)
0 diff
(100 %id)
AA365828 Pancreas .n-u 1381 to 1637 1 to 257       257/257
(100 %)
0 diff
(100 %id)
AW960005   .n-u 1382 to 2048 1 to 661   tiling clone,   661/662
(99 %)
13 diff
(98.1 %id)
AW960006   .n-u 1382 to 1668 1 to 287       287/293
(97 %)
15 diff
(94.9 %id)
AA160048   .n-u 1514 to 1994 1 to 483   fully sequenced,   483/483
(100 %)
3 diff
(99.4 %id)
BX095856 parathyroid gland, parathyroid tumor .n-u 1543 to 1787 1 to 247       247/247
(100 %)
2 diff
(99.2 %id)
AA127443.
matches multiple genes
lung, lung carcinoma .n-u 1615 to 1806 1 to 192     also hits gene SLC27A3 192/192
(100 %)
0 diff
(100 %id)
DB308326 hippocampus .n-u 1665 to 2195 531 to 1   tiling clone, to resequence,   531/531
(100 %)
0 diff
(100 %id)
AI003545 parathyroid gland, parathyroid tumor .n-u 1777 to 2195 429 to 11   AAA   419/419
(100 %)
0 diff
(100 %id)
AI168202 pooled .n-u 1885 to 2195 330 to 20   AAA   311/311
(100 %)
0 diff
(100 %id)
CF123620 CNCAP(3)T-225 cell line, Prostate .n-u 1933 to 2196 38 to 302   tiling clone,   265/303
(87 %)
2 diff
(99.4 %id)
TI_154183662   .n-u 1933 to 2195 99 to 362   AAA   264/294
(89 %)
0 diff
(100 %id)
AA160049   .n-u 1964 to 2186 223 to 1   fully sequenced,   223/223
(100 %)
1 diff
(99.6 %id)
BG699162 brain, hippocampus .o 1 to 613 1 to 614 H2D tiling clone,   614/614
(100 %)
7 diff
(98.9 %id)
DB465984 hippocampus .o 8 to 425 1 to 418       418/419
(99 %)
2 diff
(99.6 %id)
DA400413 thalamus .o 249 to 778 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
CV806853 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .o 316 to 1143 1 to 836   tiling clone,   836/887
(94 %)
38 diff
(95.8 %id)
BG777774 adenocarcinoma, Prostate .o 925 to 1657 1 to 731   tiling clone,   731/736
(99 %)
10 diff
(98.7 %id)
CN278137 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .p-u 1 to 677 8 to 686 exact tiling clone,   679/686
(98 %)
0 diff
(100 %id)
BQ364971 stomach_normal .q-u 1 to 273 19 to 286 S4H S5L V6* tiling clone,   268/286
(93 %)
0 diff
(100 %id)
BQ334804 marrow Gene DENND5A, variant not shown         Suspected internal deletion, this clone was ignored    
BC071596 Placenta, pre-eclamptic Gene DENND5A, variant not shown       available from MGC, AAA Suspected internal deletion, this clone was ignored    
BX341793   Gene DENND5A, variant not shown         Suspected internal deletion, this clone was ignored    
BX341794   Gene DENND5A, variant not shown         Suspected internal deletion, this clone was ignored    
CD692193 normal nasopharynx Gene DENND5A, variant not shown         Suspected internal deletion, this clone was ignored    
DB355551 whole embryo, mainly head Gene DENND5A, variant not shown         Suspected internal deletion, this clone was ignored    
DA568974 whole embryo, mainly head Gene DENND5A, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB303230 amygdala Gene DENND5A, variant not shown         This clone was ignored    
DA188001 amygdala Gene DENND5A, variant not shown       capped This clone was ignored    
DB254798.
matches multiple genes
uterus Gene DENND5A, variant not shown       capped This clone was ignored, also hits gene farflerbu    
DB254798.
matches multiple genes
uterus Gene farflerbu, variant not shown       capped This clone was ignored, also hits gene farflerbu    
DB351341.
matches multiple genes
uterus Gene DENND5A, variant not shown         This clone was ignored, also hits gene farflerbu    
DB351341.
matches multiple genes
uterus Gene farflerbu, variant not shown         This clone was ignored, also hits gene farflerbu    
DB271651 uterus Gene DENND5A, variant not shown       capped This clone was ignored    
DB352002 uterus Gene DENND5A, variant not shown         This clone was ignored    
DB305233 brain Gene DENND5A, variant not shown         This clone was ignored    
DA226469 brain Gene DENND5A, variant not shown       capped This clone was ignored    
DB315444 brain Gene DENND5A, variant not shown         This clone was ignored    
DA491864 brain Gene DENND5A, variant not shown       capped This clone was ignored    
R61238 whole brain Gene DENND5A, variant not shown         This clone was ignored    
R61239 whole brain Gene DENND5A, variant not shown         This clone was ignored    
R61240 whole brain Gene DENND5A, variant not shown         This clone was ignored    
R61247 whole brain Gene DENND5A, variant not shown         This clone was ignored    
BG540403 lung Gene DENND5A, variant not shown         Suspected internal deletion, this clone was ignored    
BG747711 eye, normal pigmented retinal epithelium Gene DENND5A, variant not shown         Suspected internal deletion, this clone was ignored    
BG752506 eye, normal pigmented retinal epithelium Gene DENND5A, variant not shown         Suspected internal deletion, this clone was ignored    
BQ069899 brain, neuroblastoma, cell line Gene DENND5A, variant not shown         Suspected internal deletion, this clone was ignored    
BQ898005 brain, neuroblastoma, cell line Gene DENND5A, variant not shown         Suspected internal deletion, this clone was ignored    
CB997929 placenta, pre-eclamptic placenta Gene DENND5A, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n-u, .o, .p-u, .q-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C