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Gene RAB40CandWFIKKN1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
333 supporting clones for gene RAB40CandWFIKKN1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK075356   .a 1 to 2027 2 to 2027 L147C R148G G149A L150C H151T ... tiling clone,   2027/2027
(100 %)
1 diff
(100.0 %id)
DA731839   .a 1 to 509 2 to 510   capped   509/517
(98 %)
1 diff
(99.9 %id)
AK314757 lung, tumor tissue .a 18 to 1968 1 to 1951       1951/1951
(100 %)
2 diff
(99.9 %id)
DB190612 lung, tumor tissue .a 19 to 560 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
DA732869   .a 58 to 710 2 to 654   capped   653/661
(98 %)
16 diff
(97.6 %id)
DA735442   .a 58 to 687 2 to 628   capped   627/738
(84 %)
7 diff
(99.1 %id)
CN425794 embryonic stem cells, cell lines H1, H7, andH9 .a 80 to 745 12 to 677       666/677
(98 %)
9 diff
(98.7 %id)
NM_053284.2   .a 80 to 2027 1 to 1948   RefSeq,   1948/1948
(100 %)
0 diff
(100 %id)
CN425795 embryonic stem cells, cell lines H1, H7, andH9 .a 91 to 780 1 to 690       690/690
(100 %)
3 diff
(99.6 %id)
BC101602 Brain, cerebral cortex and lung, PCR rescuedclones .a 239 to 1995 1 to 1757       1757/1757
(100 %)
0 diff
(100 %id)
BC101606 Brain, cerebral cortex and lung, PCR rescuedclones .a 239 to 1994 1 to 1756       1756/1756
(100 %)
1 diff
(100.0 %id)
TI_927047246   .a 239 to 897 662 to 5       658/1238
(53 %)
0 diff
(100 %id)
TI_927047249   .a 239 to 1202 968 to 6       963/1239
(77 %)
3 diff
(99.8 %id)
TI_927047252   .a 239 to 882 661 to 18       644/1222
(52 %)
1 diff
(100.0 %id)
TI_927047255   .a 239 to 1208 976 to 2       975/1284
(75 %)
9 diff
(99.3 %id)
CN425793 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 260 to 948 1 to 690       690/690
(100 %)
4 diff
(99.5 %id)
AF422194 lung .a 322 to 2016 1 to 1695   tiling clone,   1695/1695
(100 %)
0 diff
(100 %id)
CN425797 embryonic stem cells, cell lines H1, H7, andH9 .a 463 to 1024 1 to 562       562/562
(100 %)
1 diff
(99.9 %id)
AA341497 Kidney .b-u 1 to 186 1 to 185       185/185
(100 %)
2 diff
(99.0 %id)
DB288095 uterus .b-u 1 to 515 2 to 516   tiling clone, capped   515/515
(100 %)
0 diff
(100 %id)
BF359623 marrow .b-u 46 to 480 1 to 432       432/432
(100 %)
19 diff
(95.7 %id)
TI_157600063   .b-u 51 to 694 56 to 703     Submitted on the opposite strand 648/1103
(58 %)
10 diff
(99.1 %id)
TI_157609411   .b-u 51 to 645 80 to 674     Submitted on the opposite strand 595/674
(88 %)
6 diff
(99.2 %id)
TI_157610212   .b-u 51 to 595 57 to 601     Submitted on the opposite strand 545/601
(90 %)
6 diff
(99.1 %id)
TI_158435316   .b-u 51 to 655 54 to 656     Submitted on the opposite strand 603/660
(91 %)
13 diff
(98.1 %id)
AI189520 placenta .b-u 53 to 462 1 to 410     Submitted on the opposite strand 410/410
(100 %)
2 diff
(99.6 %id)
BF448237 carcinoid, lung .b-u 53 to 663 1 to 611     Submitted on the opposite strand 611/611
(100 %)
1 diff
(99.9 %id)
W81495 heart .b-u 54 to 483 1 to 431     Submitted on the opposite strand 431/431
(100 %)
10 diff
(97.7 %id)
AA432378   .b-u 54 to 519 1 to 466     Submitted on the opposite strand 466/466
(100 %)
0 diff
(100 %id)
AA514649 colon .b-u 54 to 518 1 to 465     Submitted on the opposite strand 465/465
(100 %)
0 diff
(100 %id)
AI160282 heart .b-u 54 to 536 1 to 483     Submitted on the opposite strand 483/483
(100 %)
0 diff
(100 %id)
AI200695 placenta .b-u 54 to 506 1 to 452     Submitted on the opposite strand 452/452
(100 %)
3 diff
(99.4 %id)
AI240042 pooled .b-u 54 to 450 1 to 397     Submitted on the opposite strand 397/397
(100 %)
3 diff
(99.3 %id)
AI375383   .b-u 54 to 574 1 to 518     Submitted on the opposite strand 518/518
(100 %)
3 diff
(99.5 %id)
AI696483 carcinoid, lung .b-u 54 to 486 1 to 434     Submitted on the opposite strand 434/436
(99 %)
3 diff
(99.4 %id)
AI631038 carcinoid, lung .b-u 54 to 378 1 to 325     Submitted on the opposite strand 325/325
(100 %)
0 diff
(100 %id)
AI913826 colon .b-u 54 to 372 1 to 319     Submitted on the opposite strand 319/320
(99 %)
1 diff
(99.7 %id)
AI698162 carcinoid, lung .b-u 54 to 497 1 to 444     Submitted on the opposite strand 444/444
(100 %)
1 diff
(99.8 %id)
AI871767 carcinoid, lung .b-u 54 to 577 1 to 523     Submitted on the opposite strand 523/523
(100 %)
5 diff
(99.1 %id)
AI808977 pooled .b-u 54 to 578 1 to 526     Submitted on the opposite strand 526/526
(100 %)
1 diff
(99.9 %id)
AI798094 B-cell, chronic lymphotic leukemia .b-u 54 to 607 1 to 554     Submitted on the opposite strand 554/554
(100 %)
2 diff
(99.7 %id)
AI831003 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .b-u 54 to 655 1 to 594     Submitted on the opposite strand 594/594
(100 %)
18 diff
(97.0 %id)
AI951743 fibrotheoma, ovary .b-u 54 to 589 1 to 536     Submitted on the opposite strand 536/536
(100 %)
1 diff
(99.9 %id)
AW071207 colon, colonic mucosa from 3 patients with Crohn'sdisease .b-u 54 to 451 1 to 401     Submitted on the opposite strand 401/401
(100 %)
4 diff
(99.1 %id)
BE217726 carcinoid, lung .b-u 54 to 601 1 to 548     Submitted on the opposite strand 548/548
(100 %)
0 diff
(100 %id)
BE219888 carcinoid, lung .b-u 54 to 380 1 to 327     Submitted on the opposite strand 327/327
(100 %)
1 diff
(99.7 %id)
BE327269 carcinoid, lung .b-u 54 to 547 1 to 494     Submitted on the opposite strand 494/494
(100 %)
1 diff
(99.8 %id)
AA923502 Kidney .b-u 55 to 437 1 to 379     Submitted on the opposite strand 379/379
(100 %)
7 diff
(98.2 %id)
AI088235 heart .b-u 55 to 296 1 to 239     Submitted on the opposite strand 239/239
(100 %)
5 diff
(98.0 %id)
AW137951   .b-u 55 to 339 1 to 285     Submitted on the opposite strand 285/285
(100 %)
1 diff
(99.7 %id)
AI128609 heart .b-u 58 to 296 2 to 238     Submitted on the opposite strand 237/238
(99 %)
7 diff
(97.1 %id)
AA057882 heart .b-u 59 to 435 7 to 387     Submitted on the opposite strand 381/392
(97 %)
11 diff
(97.2 %id)
H16205 breast .b-u 62 to 390 1 to 334     Submitted on the opposite strand 334/353
(94 %)
13 diff
(96.4 %id)
AI660444 colon, colonic mucosa from 3 patients with Crohn'sdisease .b-u 63 to 327 1 to 265     Submitted on the opposite strand 265/265
(100 %)
0 diff
(100 %id)
AW613519 carcinoid, lung .b-u 63 to 452 1 to 390     Submitted on the opposite strand 390/390
(100 %)
1 diff
(99.8 %id)
AI307130 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b-u 72 to 514 1 to 443     Submitted on the opposite strand 443/443
(100 %)
0 diff
(100 %id)
AI696182 thymus, pooled .b-u 72 to 481 1 to 410     Submitted on the opposite strand 410/411
(99 %)
3 diff
(99.3 %id)
AW005486 colon .b-u 72 to 563 1 to 492     Submitted on the opposite strand 492/492
(100 %)
0 diff
(100 %id)
BE671011 carcinoid, lung .b-u 76 to 331 1 to 256     Submitted on the opposite strand 256/256
(100 %)
4 diff
(98.5 %id)
AI769701 2 pooled tumors (clear cell type), Kidney .b-u 78 to 589 1 to 512     Submitted on the opposite strand 512/512
(100 %)
0 diff
(100 %id)
BF116146 fibrotheoma, ovary .b-u 79 to 590 1 to 512     Submitted on the opposite strand 512/512
(100 %)
0 diff
(100 %id)
BM789903 stomach .b-u 88 to 759 1 to 674       674/674
(100 %)
2 diff
(99.8 %id)
BF593711 brain, glioblastoma (pooled) .b-u 108 to 620 1 to 513     Submitted on the opposite strand 513/513
(100 %)
0 diff
(100 %id)
AW612187 carcinoid, lung .b-u 112 to 309 1 to 201     Submitted on the opposite strand 201/201
(100 %)
6 diff
(97.1 %id)
AA976629 carcinoid, lung .b-u 116 to 379 1 to 264     Submitted on the opposite strand 264/264
(100 %)
3 diff
(98.9 %id)
BI025316 marrow .b-u 147 to 347 42 to 248       207/249
(83 %)
6 diff
(97.6 %id)
BQ059400 lymph, lymphoma, cell line .b-u 228 to 1152 1 to 934       934/980
(95 %)
19 diff
(98.1 %id)
BQ061135 lymph, lymphoma, cell line .b-u 228 to 1211 1 to 998   tiling clone,   998/1000
(99 %)
21 diff
(97.9 %id)
R24386 placenta .b-u 242 to 559 1 to 320       320/320
(100 %)
4 diff
(98.8 %id)
BQ370634 placenta_normal .b-u 250 to 678 1 to 430       430/430
(100 %)
15 diff
(96.6 %id)
AA431384   .b-u 274 to 690 408 to 1     Submitted on the opposite strand 408/408
(100 %)
12 diff
(97.1 %id)
AA027001 heart .b-u 278 to 478 1 to 200       200/201
(99 %)
5 diff
(97.6 %id)
BM702185 eye, optic nerve .b-u 309 to 841 3 to 536   fully sequenced,   534/536
(99 %)
5 diff
(99.1 %id)
AK000584   .b-u 314 to 1264 1 to 952   available from FLJ, AAA   952/952
(100 %)
3 diff
(99.7 %id)
BP331867 renal proximal tubule .b-u 315 to 896 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DN992668 brain, whole brain .b-u 323 to 1001 8 to 688       681/699
(97 %)
7 diff
(99.0 %id)
BG403233 bladder, transitional cell papilloma, cell line .b-u 341 to 965 1 to 626       626/626
(100 %)
2 diff
(99.7 %id)
R73251 breast .b-u 345 to 633 1 to 290       290/290
(100 %)
4 diff
(98.7 %id)
W81494 heart .b-u 349 to 698 350 to 2     Submitted on the opposite strand 349/410
(85 %)
0 diff
(100 %id)
EC446818 Prostate .b-u 372 to 464 1 to 92       92/92
(100 %)
1 diff
(99.0 %id)
EC535467 Prostate .b-u 372 to 464 1 to 93       93/93
(100 %)
0 diff
(100 %id)
CD630750   .b-u 381 to 868 1 to 488       488/501
(97 %)
3 diff
(99.5 %id)
CD630751   .b-u 381 to 868 499 to 12       488/499
(97 %)
0 diff
(100 %id)
BF814147 colon_ins .b-u 427 to 832 1 to 407       407/407
(100 %)
5 diff
(98.8 %id)
AA394175 ovarian tumor, ovary .b-u 486 to 908 1 to 421   fully sequenced,   421/421
(100 %)
5 diff
(98.9 %id)
TI_149300124   .b-u 506 to 1256 826 to 81   AAA   746/799
(93 %)
21 diff
(97.4 %id)
BM711702 eye, human retina .b-u 538 to 1228 1 to 690       690/690
(100 %)
2 diff
(99.8 %id)
BM052895 Islets of Langerhans, Pancreas .b-u 546 to 1015 1 to 470   fully sequenced,   470/470
(100 %)
0 diff
(100 %id)
CX166015 human embryonic stem cells differentiated toan early endodermal cell type .b-u 557 to 1254 724 to 27     Submitted on the opposite strand 698/724
(96 %)
0 diff
(100 %id)
BU689938 Human Lung Epithelial cells, lung .b-u 570 to 1256 705 to 19   AAA   687/687
(100 %)
2 diff
(99.8 %id)
BQ008655 Chondrosarcoma, Left Pubic Bone .b-u 571 to 1259 707 to 19   AAA   689/689
(100 %)
3 diff
(99.6 %id)
BM997982 lung, Metastatic Chondrosarcoma .b-u 606 to 1256 669 to 19   AAA   651/651
(100 %)
0 diff
(100 %id)
CB853381 Human Lung Epithelial cells, lung .b-u 610 to 1259 668 to 19   AAA   650/650
(100 %)
0 diff
(100 %id)
BM908135 brain, medulla .b-u 621 to 1257 14 to 659       646/1187
(54 %)
57 diff
(95.2 %id)
BU630613 cell lines, Chondrosarcoma .b-u 680 to 1258 597 to 19   AAA   579/580
(99 %)
17 diff
(97.1 %id)
BU619004 Cell Line, Chondrosarcoma .b-u 684 to 1259 594 to 19   AAA   576/576
(100 %)
0 diff
(100 %id)
DR157844 human embryonic stem cells differentiated toan early endodermal cell type .b-u 692 to 1253 561 to 1     Submitted on the opposite strand 561/561
(100 %)
1 diff
(99.9 %id)
BM995472 lung, Metastatic Chondrosarcoma .b-u 696 to 1256 578 to 19   AAA   560/560
(100 %)
1 diff
(99.9 %id)
BF948635 nervous_normal .b-u 697 to 1086 9 to 401       393/401
(98 %)
6 diff
(98.6 %id)
TI_154141809   .b-u 714 to 1262 583 to 33     Submitted on the opposite strand 551/909
(60 %)
0 diff
(100 %id)
BM976267 lung, Primary Lung Cystic Fibrosis EpithelialCells .b-u 720 to 1256 554 to 19   AAA   536/536
(100 %)
1 diff
(99.9 %id)
TI_158434251   .b-u 729 to 1259 634 to 96   AAA   539/602
(89 %)
18 diff
(97.1 %id)
AW404823 lymph .b-u 761 to 1262 509 to 8   tiling clone, Submitted on the opposite strand 502/509
(98 %)
0 diff
(100 %id)
AA723115 heart .b-u 767 to 1258 493 to 1       493/493
(100 %)
3 diff
(99.4 %id)
BF432459 brain, glioblastoma (pooled) .b-u 781 to 1256 476 to 1       476/476
(100 %)
4 diff
(99.2 %id)
DB569446 hypothalamus .b-u 794 to 1257 1 to 464     Submitted on the opposite strand 464/466
(99 %)
3 diff
(99.4 %id)
AI884768 anaplastic oligodendroglioma, brain .b-u 795 to 1253 474 to 16   AAA   459/459
(100 %)
6 diff
(98.7 %id)
DB577759 hypothalamus .b-u 796 to 1257 1 to 463     Submitted on the opposite strand 463/465
(99 %)
4 diff
(99.2 %id)
BM664879 eye, optic nerve .b-u 811 to 1256 464 to 19   fully sequenced, AAA   446/446
(100 %)
0 diff
(100 %id)
AI498001 anaplastic oligodendroglioma, brain .b-u 815 to 1256 442 to 1       442/442
(100 %)
0 diff
(100 %id)
DB554640 hypothalamus .b-u 816 to 1257 1 to 441     Submitted on the opposite strand 441/443
(99 %)
13 diff
(97.1 %id)
DB546416 hippocampus .b-u 820 to 1259 1 to 440     Submitted on the opposite strand 440/440
(100 %)
0 diff
(100 %id)
BP395306 pancreatic islet .b-u 821 to 1259 1 to 439     Submitted on the opposite strand 439/443
(99 %)
2 diff
(99.6 %id)
BU729115.
matches multiple genes
eye, optic nerve .b-u 831 to 1256 443 to 19   AAA also hits gene NDUFA3 425/426
(99 %)
2 diff
(99.6 %id)
DB562617 hypothalamus .b-u 832 to 1257 1 to 425     Submitted on the opposite strand 425/427
(99 %)
6 diff
(98.6 %id)
DB534194 hippocampus .b-u 838 to 1254 1 to 415     Submitted on the opposite strand 415/417
(99 %)
6 diff
(98.6 %id)
R24277 placenta .b-u 839 to 1256 423 to 1       423/450
(94 %)
22 diff
(95.2 %id)
AI817580 normal prostate, Prostate .b-u 840 to 1262 446 to 23   AAA   424/424
(100 %)
6 diff
(98.6 %id)
BM702333.
matches multiple genes
eye, optic nerve .b-u 840 to 1256 1 to 417   AAA also hits gene NDUFA3 417/417
(100 %)
0 diff
(100 %id)
DB509276 testis .b-u 846 to 1256 1 to 411     Submitted on the opposite strand 411/411
(100 %)
3 diff
(99.3 %id)
AI198609   .b-u 867 to 1259 404 to 12   AAA   393/402
(97 %)
0 diff
(100 %id)
AA705423 liver and spleen .b-u 871 to 1256 387 to 2       386/387
(99 %)
0 diff
(100 %id)
AA292788 ovarian tumor, ovary .b-u 878 to 1256 378 to 1   fully sequenced,   378/378
(100 %)
5 diff
(98.7 %id)
AI937817 anaplastic oligodendroglioma, brain .b-u 882 to 1258 390 to 14   AAA   377/377
(100 %)
0 diff
(100 %id)
R80076 placenta .b-u 894 to 1241 1 to 348   fully sequenced,   348/348
(100 %)
5 diff
(98.6 %id)
H16204 breast .b-u 894 to 1256 373 to 2     Submitted on the opposite strand 372/407
(91 %)
0 diff
(100 %id)
CA434596 lung, Lung Focal Fibrosis .b-u 905 to 1259 373 to 19   AAA   355/366
(96 %)
0 diff
(100 %id)
AI377816 pooled .b-u 956 to 1257 320 to 19   AAA   302/302
(100 %)
0 diff
(100 %id)
AA884799 pooled .b-u 957 to 1257 318 to 19   AAA   300/300
(100 %)
2 diff
(99.4 %id)
C14233   .b-u 963 to 1259 47 to 343       297/343
(86 %)
6 diff
(98.3 %id)
C14384   .b-u 963 to 1259 47 to 342       296/344
(86 %)
5 diff
(98.6 %id)
C14482   .b-u 963 to 1259 47 to 342       296/344
(86 %)
5 diff
(98.6 %id)
C14518   .b-u 963 to 1262 47 to 344       298/344
(86 %)
6 diff
(98.3 %id)
AW949225 prostate_tumor .b-u 979 to 1205 232 to 4     Submitted on the opposite strand 229/232
(98 %)
0 diff
(100 %id)
BM052651 Islets of Langerhans, Pancreas .b-u 985 to 1260 276 to 1   fully sequenced,   276/276
(100 %)
4 diff
(98.6 %id)
BQ027275 mixed .b-u 987 to 1256 288 to 19   AAA   270/270
(100 %)
0 diff
(100 %id)
AW468666 pooled .b-u 988 to 1258 274 to 4       271/274
(98 %)
0 diff
(100 %id)
EC507239 Prostate .b-u 989 to 1090 1 to 101       101/101
(100 %)
1 diff
(99.1 %id)
AA079092   .b-u 1025 to 1259 256 to 18   AAA   239/270
(88 %)
8 diff
(97.1 %id)
R79977 placenta .b-u 1034 to 1241 212 to 1   fully sequenced,   212/212
(100 %)
2 diff
(99.1 %id)
AI479516 Kidney .b-u 1069 to 1259 204 to 14   AAA   191/191
(100 %)
0 diff
(100 %id)
AI139656 uterus .b-u 1098 to 1256 169 to 11   AAA   159/159
(100 %)
6 diff
(96.3 %id)
EC456209 Prostate .b-u 1157 to 1255 101 to 3       99/101
(98 %)
0 diff
(100 %id)
EC457866 Prostate .b-u 1166 to 1255 92 to 3       90/96
(93 %)
0 diff
(100 %id)
BM055198 Islets of Langerhans, Pancreas .b-u 1175 to 1239 1 to 65   fully sequenced,   65/65
(100 %)
0 diff
(100 %id)
BM054948 Islets of Langerhans, Pancreas .b-u 1209 to 1261 53 to 1   fully sequenced,   53/53
(100 %)
5 diff
(90.6 %id)
AK128777 hippocampus .b-u 1230 to 6107 1 to 4876 Y111S tiling clone, available from FLJ,   4876/4876
(100 %)
14 diff
(99.8 %id)
DA336086 hippocampus .b-u 1231 to 1818 2 to 589   capped   588/588
(100 %)
3 diff
(99.5 %id)
DA736497   .b-u 2049 to 2738 2 to 692   tiling clone, capped   691/691
(100 %)
11 diff
(98.5 %id)
CN425799 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b-u 3049 to 3294 1 to 246       246/246
(100 %)
2 diff
(99.2 %id)
BM703680 eye, human retina .b-u 3950 to 4414 1 to 465       465/465
(100 %)
0 diff
(100 %id)
BM728190 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b-u 3950 to 4429 1 to 480       480/480
(100 %)
0 diff
(100 %id)
DA054577 cerebellum .b-u 4058 to 4625 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
TI_151703480   .b-u 4266 to 5037 829 to 58       772/1303
(59 %)
0 diff
(100 %id)
TI_151726439   .b-u 4311 to 5037 770 to 46   tiling clone,   725/770
(94 %)
0 diff
(100 %id)
BX280326 cervix, tumor .b-u 4481 to 4937 1 to 457       457/457
(100 %)
0 diff
(100 %id)
AW182905 cervix, tumor .b-u 4547 to 4999 453 to 1       453/453
(100 %)
1 diff
(99.8 %id)
CN425796 embryonic stem cells, cell lines H1, H7, andH9 .b-u 4588 to 5203 1 to 618       618/618
(100 %)
5 diff
(99.2 %id)
TI_927047254   .b-u 4616 to 5801 1187 to 8       1180/1235
(95 %)
0 diff
(100 %id)
TI_927047248   .b-u 4642 to 5802 1162 to 4   tiling clone,   1159/1238
(93 %)
0 diff
(100 %id)
AI819096 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .b-u 4723 to 5037 315 to 1       315/315
(100 %)
0 diff
(100 %id)
TI_927045052   .b-u 4945 to 6084 1193 to 65   tiling clone,   1129/1210
(93 %)
0 diff
(100 %id)
TI_927045061   .b-u 4971 to 6084 1170 to 59       1112/1210
(91 %)
0 diff
(100 %id)
TI_927045060   .b-u 4995 to 6090 1136 to 55       1082/1169
(92 %)
0 diff
(100 %id)
TI_927045051   .b-u 5013 to 6090 1133 to 58       1076/1212
(88 %)
0 diff
(100 %id)
CN425798 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b-u 5378 to 5842 1 to 465       465/465
(100 %)
1 diff
(99.8 %id)
DB368991   .b-u 5563 to 6107 547 to 1   tiling clone,   547/547
(100 %)
20 diff
(96.4 %id)
DB309882 hippocampus .b-u 5572 to 6107 536 to 1       536/536
(100 %)
1 diff
(99.9 %id)
BM561889 leukocyte .c 1 to 912 9 to 935   tiling clone,   927/1127
(82 %)
41 diff
(96.4 %id)
BF967048 brain, hypothalamus .c 28 to 767 1 to 731       731/932
(78 %)
34 diff
(96.4 %id)
BM545442 brain, hippocampus .c 31 to 876 17 to 862       846/992
(85 %)
30 diff
(97.0 %id)
BC064904 Pancreas, epithelioid carcinoma .c 68 to 899 79 to 910   AAA   832/1443
(57 %)
7 diff
(99.6 %id)
BQ233405 epithelioid carcinoma, Pancreas .c 68 to 767 78 to 785       708/838
(84 %)
43 diff
(94.9 %id)
BC028696 testis .c 87 to 2702 1 to 2616   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 2616/2616
(100 %)
7 diff
(99.8 %id)
BG721411 testis .c 87 to 862 1 to 776       776/776
(100 %)
10 diff
(98.8 %id)
BM172345 testis .c 87 to 734 1 to 651       651/651
(100 %)
10 diff
(98.5 %id)
NM_021168.4   .c 89 to 2704 1 to 2616   RefSeq, AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 2616/2616
(100 %)
0 diff
(100 %id)
TI_45379149   .c 92 to 774 68 to 751       684/1012
(67 %)
14 diff
(98.7 %id)
BI488583 brain .c 96 to 774 1 to 680       680/941
(72 %)
8 diff
(99.2 %id)
BX383974   .c 103 to 953 1 to 850       850/855
(99 %)
2 diff
(99.8 %id)
CB992360 placenta, pre-eclamptic placenta .c 106 to 873 28 to 802       775/833
(93 %)
21 diff
(97.5 %id)
CB992346 placenta, pre-eclamptic placenta .c 106 to 722 28 to 650       623/736
(84 %)
24 diff
(96.8 %id)
CB994464 placenta, pre-eclamptic placenta .c 106 to 683 28 to 603       576/706
(81 %)
16 diff
(97.8 %id)
CB993347 placenta, pre-eclamptic placenta .c 106 to 772 28 to 697       670/803
(83 %)
16 diff
(98.1 %id)
CB992254 placenta, pre-eclamptic placenta .c 106 to 869 28 to 794       767/810
(94 %)
20 diff
(97.6 %id)
BX282685 large cell carcinoma, lung .c 108 to 604 1 to 497       497/497
(100 %)
0 diff
(100 %id)
BI756882 brain .c 109 to 1016 1 to 898       898/936
(95 %)
32 diff
(96.6 %id)
BQ430138 large cell carcinoma, lung .c 109 to 965 1 to 862       862/868
(99 %)
11 diff
(98.8 %id)
TI_57220131   .c 109 to 1016 25 to 922       898/960
(93 %)
37 diff
(96.2 %id)
BI489079 brain .c 771 to 1493 722 to 1       722/921
(78 %)
7 diff
(99.3 %id)
TI_45379150   .c 771 to 1501 770 to 41       730/969
(75 %)
0 diff
(100 %id)
BF967874 brain, hypothalamus .c 2038 to 2648 609 to 1   tiling clone,   747/822
(90 %)
47 diff
(94.3 %id)
BQ227871 leiomyosarcoma, uterus .d 1 to 651 1 to 652   tiling clone,   652/1030
(63 %)
6 diff
(99.5 %id)
TI_57241350   .d 3 to 890 25 to 912   tiling clone,   888/912
(97 %)
24 diff
(97.4 %id)
BI913726 brain .d 9 to 822 1 to 815   tiling clone,   815/821
(99 %)
11 diff
(98.7 %id)
NM_001172665.1   .d 10 to 2580 1 to 2571   RefSeq, AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 2571/2571
(100 %)
0 diff
(100 %id)
CX166809 human embryonic stem cells differentiated toan early endodermal cell type .d 13 to 759 1 to 747       747/747
(100 %)
0 diff
(100 %id)
CT004315 T-Lymphocytes .d 24 to 813 1 to 792   tiling clone,   792/794
(99 %)
3 diff
(99.7 %id)
BU527649 epidermoid carcinoma, cell line, lung .d 27 to 934 1 to 914   tiling clone,   914/960
(95 %)
18 diff
(98.2 %id)
CB215738 normal endometrium, late proliferativephase, cycle day 13, uterus .d 30 to 648 1 to 619       619/619
(100 %)
0 diff
(100 %id)
BQ685517 ductal carcinoma, cell line, Pancreas .d 31 to 899 1 to 887   tiling clone,   887/893
(99 %)
23 diff
(97.5 %id)
DN998618 bone marrow .d 37 to 714 3 to 680       678/680
(99 %)
7 diff
(99.0 %id)
NM_001172666.1   .e 1 to 2514 1 to 2514 exact RefSeq, AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 2514/2514
(100 %)
0 diff
(100 %id)
AY823398 brain .e 31 to 1311 1 to 1281   tiling clone,   1281/1281
(100 %)
2 diff
(99.9 %id)
BE258150 eye, retinoblastoma .e 115 to 772 1 to 659       659/752
(87 %)
17 diff
(97.8 %id)
BF967193 brain, hypothalamus .f 1 to 721 1 to 713   tiling clone,   713/912
(78 %)
31 diff
(96.7 %id)
BG715678 brain, hypothalamus .f 1 to 756 1 to 758   tiling clone,   758/758
(100 %)
11 diff
(98.6 %id)
NM_001172664.1   .f 4 to 2614 1 to 2611 exact RefSeq, AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 2611/2611
(100 %)
0 diff
(100 %id)
DB485589 hypothalamus .f 6 to 414 1 to 410       410/410
(100 %)
2 diff
(99.6 %id)
DB498355 hypothalamus .f 6 to 535 1 to 530   tiling clone,   530/530
(100 %)
1 diff
(99.9 %id)
DB506469 hypothalamus .f 6 to 474 1 to 469       469/469
(100 %)
1 diff
(99.8 %id)
BF967919 brain, hypothalamus .f 1748 to 2557 810 to 1   tiling clone,   810/1018
(79 %)
39 diff
(96.2 %id)
DB442293 testis .g 1 to 439 1 to 441   tiling clone,   441/444
(99 %)
44 diff
(90.1 %id)
BG696681 skin .g 14 to 705 1 to 693   tiling clone,   693/694
(99 %)
2 diff
(99.8 %id)
NM_001172663.1   .g 14 to 2732 1 to 2719 exact RefSeq, AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 2719/2719
(100 %)
0 diff
(100 %id)
BI465313 testis .g 29 to 760 3 to 740       738/742
(99 %)
19 diff
(97.5 %id)
CX783728 human embryonic stem cells .g 29 to 650 1 to 622   tiling clone,   622/622
(100 %)
0 diff
(100 %id)
BM806012 brain, hippocampus .g 52 to 507 1 to 457       457/1244
(36 %)
14 diff
(98.9 %id)
BI046773 prostate_normal .g 293 to 697 1 to 410       410/410
(100 %)
20 diff
(95.2 %id)
BF858066 prostate_tumor .g 295 to 724 441 to 10     Submitted on the opposite strand 432/441
(97 %)
13 diff
(97.1 %id)
BF856900 prostate_tumor .g 299 to 724 444 to 19     Submitted on the opposite strand 426/459
(92 %)
1 diff
(99.8 %id)
BF852060 lung_normal .g 305 to 720 36 to 449       414/450
(92 %)
14 diff
(96.9 %id)
BF852090 lung_normal .g 309 to 724 428 to 13     Submitted on the opposite strand 416/429
(96 %)
2 diff
(99.6 %id)
BI046718 prostate_normal .g 309 to 719 430 to 1       425/431
(98 %)
20 diff
(95.4 %id)
BF813406 colon_ins .g 310 to 686 1 to 377       377/377
(100 %)
0 diff
(100 %id)
BF856882 prostate_tumor .g 310 to 724 416 to 7     Submitted on the opposite strand 409/416
(98 %)
0 diff
(100 %id)
BF856905 prostate_tumor .g 310 to 713 1 to 403       403/403
(100 %)
2 diff
(99.6 %id)
BI046217 prostate_normal .g 310 to 719 1 to 409       409/409
(100 %)
4 diff
(99.1 %id)
BI046224 prostate_normal .g 310 to 719 1 to 410       410/410
(100 %)
1 diff
(99.8 %id)
BI046670 prostate_normal .g 310 to 721 412 to 1       412/412
(100 %)
2 diff
(99.6 %id)
BI046729 prostate_normal .g 310 to 719 410 to 1       410/410
(100 %)
3 diff
(99.3 %id)
BI046799 prostate_normal .g 310 to 477 168 to 3       166/168
(98 %)
2 diff
(98.9 %id)
BI046735 prostate_normal .g 311 to 667 1 to 357       357/357
(100 %)
8 diff
(97.8 %id)
BG746695 adenocarcinoma cell line, colon .g 317 to 867 1 to 549       549/549
(100 %)
2 diff
(99.7 %id)
BF852544 lung_normal .g 320 to 719 9 to 406       398/406
(98 %)
11 diff
(97.3 %id)
BQ373306 prostate_tumor .g 332 to 719 385 to 1       385/385
(100 %)
3 diff
(99.3 %id)
BF813404 colon_ins .g 348 to 729 415 to 34     Submitted on the opposite strand 383/415
(92 %)
16 diff
(96.2 %id)
BF813437 colon_ins .g 373 to 724 365 to 14     Submitted on the opposite strand 352/365
(96 %)
0 diff
(100 %id)
BF813405 colon_ins .g 377 to 724 349 to 2     Submitted on the opposite strand 348/373
(93 %)
8 diff
(97.9 %id)
BF813411 colon_ins .g 377 to 719 343 to 1     Submitted on the opposite strand 343/375
(91 %)
2 diff
(99.5 %id)
BI046539 prostate_normal .g 377 to 595 26 to 244       219/244
(89 %)
16 diff
(93.5 %id)
BQ417249 Pancreas, Purified pancreatic islet .g 393 to 1019 1 to 627       627/627
(100 %)
1 diff
(99.9 %id)
TI_159716564   .g 409 to 1265 900 to 46       855/1098
(77 %)
4 diff
(99.7 %id)
BF852080 lung_normal .g 435 to 724 304 to 13     Submitted on the opposite strand 291/336
(86 %)
10 diff
(97.1 %id)
CD674470 eye, lens .g 435 to 865 1 to 431       431/431
(100 %)
0 diff
(100 %id)
BF811156 colon_ins .g 463 to 719 257 to 1     Submitted on the opposite strand 257/257
(100 %)
0 diff
(100 %id)
BF852853 lung_normal .g 492 to 719 17 to 244       228/244
(93 %)
10 diff
(96.0 %id)
CB852513 Human Lung Epithelial cells, lung .g 512 to 1265 758 to 5       754/758
(99 %)
2 diff
(99.8 %id)
BC001581 Cervix, carcinoma .g 523 to 1521 1 to 999   tiling clone, available from MGC,   999/999
(100 %)
0 diff
(100 %id)
BE545420 cervical carcinoma cell line, cervix .g 544 to 957 1 to 413   available from MGC,   413/413
(100 %)
5 diff
(98.8 %id)
AA481848 ovarian tumor, ovary .g 551 to 989 1 to 438       438/438
(100 %)
3 diff
(99.4 %id)
BI824258 pooled brain, lung, testis .g 574 to 1092 1 to 519       519/519
(100 %)
1 diff
(99.9 %id)
BI046398 prostate_normal .g 577 to 721 163 to 16       148/163
(90 %)
0 diff
(100 %id)
BQ335877 marrow .g 636 to 770 137 to 2       136/152
(89 %)
0 diff
(100 %id)
R34954 placenta .g 668 to 909 1 to 243       243/248
(97 %)
3 diff
(98.8 %id)
BX112916 placenta .g 669 to 1356 1 to 694       694/703
(98 %)
9 diff
(98.8 %id)
AI935153 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .g 672 to 1529 851 to 1       851/852
(99 %)
28 diff
(96.8 %id)
AW027719 thymus, pooled .g 677 to 1529 847 to 1       847/847
(100 %)
27 diff
(96.9 %id)
BF688376 eye, normal pigmented retinal epithelium .g 680 to 1422 1 to 758       724/765
(94 %)
31 diff
(96.0 %id)
BF688391 eye, normal pigmented retinal epithelium .g 680 to 1388 1 to 732       732/747
(97 %)
51 diff
(93.2 %id)
BI085494 astrocytoma grade IV, cell line, brain .g 735 to 1516 1 to 785       785/785
(100 %)
16 diff
(98.0 %id)
AW007787 colon .g 799 to 1529 731 to 1       731/832
(87 %)
13 diff
(98.5 %id)
BF058476 fibrotheoma, ovary .g 801 to 1529 730 to 1       730/730
(100 %)
34 diff
(95.4 %id)
BM006008 hepatocellular carcinoma, cell line, Liver .g 806 to 1568 1 to 764       764/764
(100 %)
17 diff
(97.8 %id)
TI_59385961   .g 807 to 1568 60 to 822       763/763
(100 %)
16 diff
(98.0 %id)
BQ650242 hepatocellular carcinoma, cell line, Liver .g 808 to 1455 1 to 654       654/956
(68 %)
11 diff
(98.9 %id)
BQ644343 hepatocellular carcinoma, cell line, Liver .g 808 to 1370 1 to 566       566/1049
(53 %)
26 diff
(97.6 %id)
TI_157602009   .g 817 to 1529 807 to 87       721/1069
(67 %)
0 diff
(100 %id)
AA587380 colon, colon tumor RER+ .g 863 to 1484 621 to 1       621/621
(100 %)
8 diff
(98.8 %id)
CD557233 testis .g 891 to 1397 1 to 507   AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 507/507
(100 %)
2 diff
(99.7 %id)
CA952520 Pancreas, Purified pancreatic islet .g 902 to 1489 588 to 1       588/588
(100 %)
1 diff
(99.9 %id)
BI085447 astrocytoma grade IV, cell line, brain .g 918 to 1648 1 to 731       731/732
(99 %)
11 diff
(98.5 %id)
AW516749 cervix, tumor .g 929 to 1514 586 to 1       586/586
(100 %)
0 diff
(100 %id)
BI760325 pooled colon, kidney, stomach .g 932 to 1517 1 to 590       590/595
(99 %)
11 diff
(98.2 %id)
BU175590 epithelioid carcinoma, Pancreas .g 932 to 1517 1 to 586       586/590
(99 %)
3 diff
(99.5 %id)
TI_57148096   .g 932 to 1529 73 to 675       603/890
(67 %)
12 diff
(98.7 %id)
AI818655 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .g 953 to 1513 562 to 2       561/562
(99 %)
0 diff
(100 %id)
TI_157602007   .g 960 to 1529 659 to 89       571/1175
(48 %)
0 diff
(100 %id)
BF513959   .g 965 to 1397 450 to 18   AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 433/433
(100 %)
4 diff
(99.1 %id)
BQ187128 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .g 999 to 1521 1 to 524       524/524
(100 %)
1 diff
(99.9 %id)
TI_151733803   .g 999 to 1529 580 to 52       529/1034
(51 %)
0 diff
(100 %id)
CU444414 epidermis .g 1009 to 1467 7 to 465       459/478
(96 %)
6 diff
(98.8 %id)
CU446237 epidermis .g 1009 to 1467 472 to 13     Submitted on the opposite strand 460/478
(96 %)
0 diff
(100 %id)
CU446909 epidermis .g 1009 to 1467 7 to 465       459/478
(96 %)
6 diff
(98.8 %id)
CU448687 epidermis .g 1009 to 1467 473 to 14     Submitted on the opposite strand 460/479
(96 %)
0 diff
(100 %id)
CU450612 epidermis .g 1009 to 1395 7 to 393       387/401
(96 %)
5 diff
(98.8 %id)
CU450903 epidermis .g 1009 to 1467 466 to 8     Submitted on the opposite strand 459/472
(97 %)
0 diff
(100 %id)
CU451462 epidermis .g 1009 to 1465 461 to 4     Submitted on the opposite strand 458/467
(98 %)
0 diff
(100 %id)
AI361013 brain, glioblastoma (pooled) .g 1015 to 1529 515 to 1       515/515
(100 %)
3 diff
(99.5 %id)
AW800784 uterus .g 1022 to 1169 156 to 10       147/156
(94 %)
0 diff
(100 %id)
BM721440 eye, fetal eye .g 1051 to 1524 1 to 473     Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 473/473
(100 %)
3 diff
(99.4 %id)
BQ287791 Pancreas, Purified pancreatic islet .g 1073 to 1494 422 to 1       422/422
(100 %)
0 diff
(100 %id)
BI091322 cervix .g 1082 to 1519 1 to 438       438/438
(100 %)
2 diff
(99.6 %id)
AI624737 pooled germ cell tumors .g 1098 to 1529 432 to 1       432/432
(100 %)
0 diff
(100 %id)
AA481994.
matches multiple genes
ovarian tumor, ovary .g 1140 to 1529 390 to 1     also hits gene TMX4 390/390
(100 %)
0 diff
(100 %id)
H20104 brain .g 1142 to 1395 257 to 3     Submitted on the opposite strand 255/257
(99 %)
0 diff
(100 %id)
AI371840 pooled germ cell tumors .g 1157 to 1484 328 to 1       328/328
(100 %)
2 diff
(99.4 %id)
R33477 placenta .g 1180 to 1482 315 to 2       314/323
(97 %)
0 diff
(100 %id)
AI698329 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .g 1184 to 1529 346 to 2       345/346
(99 %)
0 diff
(100 %id)
AW519228 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .g 1191 to 1529 343 to 2       342/343
(99 %)
0 diff
(100 %id)
BQ943909 large cell carcinoma, lung .g 1192 to 2063 1 to 880   tiling clone,   880/901
(97 %)
16 diff
(98.3 %id)
AI886314 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .g 1230 to 1529 301 to 2       300/301
(99 %)
0 diff
(100 %id)
H30459 breast .g 1235 to 1464 234 to 1       234/234
(100 %)
5 diff
(97.9 %id)
AA355537   .g 1295 to 1434 1 to 140       140/140
(100 %)
4 diff
(97.2 %id)
AW958573   .g 1316 to 1550 21 to 255       235/255
(92 %)
6 diff
(97.7 %id)
AW166046 brain, medulloblastoma .g 1341 to 1514 174 to 1       174/174
(100 %)
0 diff
(100 %id)
BM711270 eye, fetal eyes .g 1388 to 1851 1 to 464     Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 464/464
(100 %)
12 diff
(97.5 %id)
BM991342 lung, Lung Focal Fibrosis .g 1398 to 1887 1 to 490   AAA Submitted on the opposite strand 490/491
(99 %)
6 diff
(98.8 %id)
DA122719 cerebellum .g 1427 to 1951 2 to 526   tiling clone, capped   525/525
(100 %)
0 diff
(100 %id)
BF688852 eye, normal pigmented retinal epithelium .g 1891 to 2708 841 to 18   tiling clone,   824/1199
(68 %)
0 diff
(100 %id)
BF688866 eye, normal pigmented retinal epithelium .g 1906 to 2691 839 to 45   tiling clone,   795/841
(94 %)
0 diff
(100 %id)
BI085677 astrocytoma grade IV, cell line, brain .g 2062 to 2641 586 to 1       586/586
(100 %)
9 diff
(98.5 %id)
BM677091 eye, fetal eye .g 2196 to 2732 553 to 17   tiling clone, AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 537/537
(100 %)
1 diff
(99.9 %id)
AW007215 anaplastic oligodendroglioma, brain .g 2228 to 2726 501 to 2       591/617
(95 %)
7 diff
(98.9 %id)
BM666257 eye, fetal eyes .g 2367 to 2730 382 to 19   AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 364/364
(100 %)
0 diff
(100 %id)
BI523551 brain .h 1 to 736 62 to 799   tiling clone, to resequence,   739/944
(78 %)
25 diff
(97.4 %id)
TI_44185537   .h 1 to 736 62 to 799       739/944
(78 %)
25 diff
(97.4 %id)
TI_57166142   .h 821 to 1513 31 to 723   tiling clone,   693/723
(95 %)
6 diff
(99.2 %id)
BI835478 pooled pancreas and spleen .h 826 to 1513 1 to 688   tiling clone,   688/688
(100 %)
1 diff
(99.9 %id)
BM823803 Ascites, stomach .h 1035 to 1524 1 to 491       491/491
(100 %)
1 diff
(99.8 %id)
BI824573 pooled brain, lung, testis .h 1104 to 1625 1 to 529       529/529
(100 %)
21 diff
(96.1 %id)
BI824257 pooled brain, lung, testis .h 1107 to 1625 1 to 520       520/520
(100 %)
5 diff
(99.1 %id)
TI_57198087   .h 1109 to 1898 77 to 886       810/889
(91 %)
13 diff
(98.6 %id)
TI_57202338   .h 1109 to 1762 37 to 697       661/817
(80 %)
19 diff
(97.7 %id)
TI_57202339   .h 1109 to 1866 33 to 799   tiling clone,   767/799
(95 %)
21 diff
(97.4 %id)
BI522888 brain .h 1442 to 2049 611 to 5   tiling clone, to resequence,   607/613
(99 %)
0 diff
(100 %id)
TI_44185538   .h 1442 to 2062 656 to 38   tiling clone,   619/658
(94 %)
0 diff
(100 %id)
BX384239   .i 1 to 866 1 to 849 H62A L63P A64G F65L K66Q ... tiling clone,   849/912
(93 %)
26 diff
(97.2 %id)
BQ717538 sympathetic trunk .i 50 to 881 1 to 840 R172P S173F Y174L S175L L176P ... tiling clone,   840/933
(90 %)
19 diff
(98.0 %id)
CA843175 Pancreas, Purified pancreatic islet .j 1 to 592 1 to 592   tiling clone,   592/592
(100 %)
3 diff
(99.5 %id)
DB477811 hippocampus .j 20 to 493 1 to 474       474/476
(99 %)
7 diff
(98.6 %id)
BE621282 epithelioid carcinoma, Pancreas .j 73 to 609 1 to 537   tiling clone, fully sequenced,   537/537
(100 %)
0 diff
(100 %id)
DB467208 hippocampus .j 74 to 492 34 to 449       416/450
(92 %)
19 diff
(95.8 %id)
BI025141 marrow .j 132 to 460 1 to 331       331/332
(99 %)
11 diff
(96.7 %id)
BF811132 colon_ins .j 134 to 389 1 to 256       256/257
(99 %)
2 diff
(99.3 %id)
BE965869 epithelioid carcinoma, Pancreas .j 579 to 1221 635 to 1   tiling clone, fully sequenced,   635/635
(100 %)
15 diff
(97.7 %id)
CA843926 Pancreas, Purified pancreatic islet .j 660 to 1188 529 to 1   tiling clone,   529/529
(100 %)
1 diff
(99.9 %id)
CB988593 Human Placenta, placenta .k -8 to 615 29 to 660 T154P T176D E177G Q178A A179S ... tiling clone,   632/845
(74 %)
30 diff
(96.5 %id)
BX420542 brain, fetal brain .l 1 to 917 1 to 910   tiling clone,   910/913
(99 %)
12 diff
(98.7 %id)
BX401076   .m 1 to 783 1 to 780   tiling clone,   780/780
(100 %)
3 diff
(99.7 %id)
BC014531 Lung, small cell carcinoma .o-u 1 to 2049 1 to 2050 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 2050/2050
(100 %)
11 diff
(99.5 %id)
BE791784 lung, small cell carcinoma .o-u 20 to 765 1 to 748 H81T M82H V83G R84T C85M ... available from MGC,   748/1009
(74 %)
18 diff
(98.3 %id)
CV368574 lung_tumor .o-u 1267 to 1536 269 to 1     Submitted on the opposite strand 269/286
(94 %)
15 diff
(94.8 %id)
CV368567 lung_tumor .o-u 1274 to 1512 262 to 24     Submitted on the opposite strand 239/280
(85 %)
0 diff
(100 %id)
N28454 melanocyte .p 1 to 391 1 to 394   tiling clone,   394/400
(98 %)
14 diff
(96.5 %id)
BF852203 lung_normal .p 69 to 565 15 to 509 R6S G18C D57A T82R R86A ... tiling clone,   495/509
(97 %)
14 diff
(97.3 %id)
DA171058 amygdala Gene RAB40CandWFIKKN1, variant not shown       capped Suspected internal deletion, suspected internal deletion, this clone was ignored    
DB310007 hippocampus Gene RAB40CandWFIKKN1, variant not shown         This clone was ignored    
DA338715 hippocampus Gene RAB40CandWFIKKN1, variant not shown       capped This clone was ignored    
BX442451 brain, fetal brain Gene RAB40CandWFIKKN1, variant not shown         This clone was ignored    
AI202917 pooled germ cell tumors Gene RAB40CandWFIKKN1, variant not shown       AAA Submitted on the opposite strand, submitted on the opposite strand, submitted on the opposite strand    
AI365302 pooled germ cell tumors Gene RAB40CandWFIKKN1, variant not shown       AAA Submitted on the opposite strand, submitted on the opposite strand, submitted on the opposite strand    
BI771361 pooled lung and spleen Gene RAB40CandWFIKKN1, variant not shown         This clone was ignored    
CX783025 human embryonic stem cells Gene RAB40CandWFIKKN1, variant not shown       fully sequenced, Suspected internal deletion, suspected internal deletion, this clone was ignored    
CX783101 human embryonic stem cells Gene RAB40CandWFIKKN1, variant not shown       fully sequenced, Suspected internal deletion, suspected internal deletion, this clone was ignored    
CB989892 Human Placenta, placenta Gene RAB40CandWFIKKN1, variant not shown              
TI_57182732   Gene RAB40CandWFIKKN1, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b-u, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n-u, .o-u, .p Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI