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Gene RAB27BTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
38 supporting clones for gene RAB27B back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA332989 hippocampus .a 1 to 596 2 to 597   tiling clone, capped   596/596
(100 %)
0 diff
(100 %id)
DB487835 hypothalamus .a 147 to 425 154 to 431       278/431
(64 %)
6 diff
(98.7 %id)
TI_1948090146   .a 164 to 540 129 to 505       377/404
(93 %)
6 diff
(98.6 %id)
TI_1948090283   .a 164 to 584 133 to 553       421/448
(93 %)
6 diff
(98.7 %id)
AA846320   .a 427 to 849 423 to 2   tiling clone,   422/423
(99 %)
2 diff
(99.6 %id)
AK314115 amygdala .b 1 to 1177 2 to 1178 exact tiling clone,   1178/1178
(100 %)
1 diff
(100.0 %id)
DA151069 amygdala .b 1 to 566 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
BF243879 bone marrow, from acute myelogenous leukemia .b 277 to 864 1 to 591       591/869
(68 %)
20 diff
(97.7 %id)
AF329499   .b 278 to 1659 1 to 1382 exact     1382/1382
(100 %)
1 diff
(100.0 %id)
AL706527 human skeletal muscle .b 382 to 625 1 to 245       245/245
(100 %)
2 diff
(99.2 %id)
BC027474 Prostate, adenocarcinoma. .b 410 to 1742 1 to 1333 exact available from MGC, AAA   1333/1333
(100 %)
1 diff
(100.0 %id)
BX281002 adenocarcinoma, cell line, Prostate .b 410 to 888 1 to 479       479/479
(100 %)
0 diff
(100 %id)
NM_004163.3   .b 410 to 1742 1 to 1333 exact RefSeq, AAA   1333/1333
(100 %)
1 diff
(100.0 %id)
BG284004 adenocarcinoma, cell line, Prostate .b 411 to 1066 1 to 657       657/657
(100 %)
3 diff
(99.6 %id)
AA588753 colon, colon tumor .b 430 to 789 1 to 361     Submitted on the opposite strand 361/361
(100 %)
3 diff
(99.2 %id)
U57093 melanom .b 430 to 1471 1 to 1041 exact     1041/1042
(99 %)
11 diff
(99.0 %id)
BG195281   .b 499 to 1297 1 to 792 A165R L180*     792/796
(99 %)
24 diff
(97.0 %id)
AF498954 brain .b 521 to 1177 1 to 657 exact     657/657
(100 %)
0 diff
(100 %id)
CV030285 mixed .b 521 to 1172 1 to 650       650/650
(100 %)
3 diff
(99.6 %id)
CB565911 mixed .b 521 to 1177 1 to 657 exact     657/657
(100 %)
0 diff
(100 %id)
TI_1948090025   .b 521 to 894 133 to 506   fully sequenced,   374/402
(93 %)
6 diff
(98.6 %id)
TI_1948090409   .b 521 to 790 132 to 401   fully sequenced,   270/299
(90 %)
6 diff
(98.0 %id)
DR005667 Prostate .b 575 to 1082 1 to 508       508/508
(100 %)
1 diff
(99.9 %id)
TI_1948090410   .b 729 to 1176 573 to 126   fully sequenced,   448/475
(94 %)
0 diff
(100 %id)
AW664866 pooled .b 757 to 1169 413 to 1       413/418
(98 %)
3 diff
(99.3 %id)
AA812916   .b 767 to 1267 503 to 3       501/503
(99 %)
2 diff
(99.7 %id)
TI_1948090026   .b 833 to 1176 469 to 126   fully sequenced,   344/371
(92 %)
0 diff
(100 %id)
FN057439 breast carcinoma .b 986 to 1061 1 to 74       74/80
(92 %)
3 diff
(96.3 %id)
BU618369 Cell Line, Chondrosarcoma .b 1001 to 1740 757 to 19   tiling clone, AAA   739/739
(100 %)
4 diff
(99.5 %id)
FN141900 breast carcinoma .b 1008 to 1105 99 to 1     Submitted on the opposite strand 99/100
(99 %)
1 diff
(99.0 %id)
AW370404 breast .b 1033 to 1493 27 to 487       461/487
(94 %)
6 diff
(98.8 %id)
BF088963 head_neck .b 1064 to 1488 435 to 10       426/435
(97 %)
0 diff
(100 %id)
AW592937 pooled .b 1341 to 1741 404 to 3       402/404
(99 %)
0 diff
(100 %id)
FN113007 breast carcinoma .b 1729 to 1834 1 to 106   tiling clone,   106/106
(100 %)
2 diff
(98.2 %id)
AL707788 human skeletal muscle .c 1 to 597 1 to 597 exact tiling clone,   597/597
(100 %)
0 diff
(100 %id)
BF958077 nervous_normal .d-u 1 to 287 6 to 303   tiling clone,   298/307
(97 %)
28 diff
(90.9 %id)
BF959262 nervous_normal .d-u 1 to 476 5 to 482   tiling clone,   478/482
(99 %)
6 diff
(98.8 %id)
BF956862 nervous_normal .d-u 104 to 605 506 to 8 M33I tiling clone,   499/506
(98 %)
15 diff
(97.1 %id)
AI432357 pooled Gene RAB27B, variant not shown       AAA This clone was ignored    
BF939349 Prostate Gene RAB27B, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI