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Gene RAB25TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
257 supporting clones for gene RAB25 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BP263750 small intestine .a 1 to 564 1 to 565   tiling clone,   565/565
(100 %)
3 diff
(99.5 %id)
BU600788 mixed (pool of 40 RNAs) .a 9 to 814 1 to 813       813/816
(99 %)
15 diff
(98.2 %id)
BM822680 stomach .a 12 to 346 1 to 335       335/335
(100 %)
0 diff
(100 %id)
BM831275 stomach .a 12 to 573 1 to 562       562/562
(100 %)
0 diff
(100 %id)
BM834846 stomach .a 12 to 478 1 to 467       467/467
(100 %)
0 diff
(100 %id)
DN995724 breast cancer, Mammary gland (cancer tissue) .a 12 to 523 9 to 520       512/520
(98 %)
6 diff
(98.9 %id)
CN429080 embryonic stem cells, cell lines H1, H7, andH9 .a 15 to 697 1 to 683       683/683
(100 %)
6 diff
(99.2 %id)
BP260729 small intestine .a 15 to 596 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP261271 small intestine .a 15 to 596 1 to 582       582/582
(100 %)
0 diff
(100 %id)
CB144448 Liver .a 15 to 572 1 to 558       558/558
(100 %)
1 diff
(99.9 %id)
CB142244 Liver .a 15 to 415 1 to 401       401/401
(100 %)
4 diff
(99.1 %id)
BM762495 lymph node, stomach .a 16 to 625 1 to 610       610/610
(100 %)
0 diff
(100 %id)
BM842447 lymph node, stomach .a 16 to 530 1 to 515       515/515
(100 %)
0 diff
(100 %id)
BM845419 lymph node, stomach .a 16 to 520 1 to 504       504/504
(100 %)
1 diff
(99.9 %id)
BQ316311 colon .a 17 to 391 415 to 41       375/415
(90 %)
0 diff
(100 %id)
CB128282 Liver .a 18 to 436 1 to 419       419/419
(100 %)
0 diff
(100 %id)
BM762058 myeloma .a 20 to 625 1 to 606       606/606
(100 %)
0 diff
(100 %id)
CN429079 embryonic stem cells, DMSO-treated H9 cellline .a 21 to 781 1 to 761       761/761
(100 %)
5 diff
(99.4 %id)
AA291210 ovarian tumor, ovary .a 22 to 516 1 to 494       494/494
(100 %)
5 diff
(99.0 %id)
BM833326 stomach .a 23 to 328 1 to 306       306/306
(100 %)
0 diff
(100 %id)
BM822403 stomach .a 25 to 378 1 to 353       353/353
(100 %)
2 diff
(99.5 %id)
CR599507 Placenta Cot 25-normalized .a 26 to 1112 1 to 1087 exact tiling clone,   1087/1087
(100 %)
0 diff
(100 %id)
AL545490 placenta, Placenta Cot 25-normalized .a 26 to 1028 1 to 992 S178X Q196R A197L G198D Q199R ...     992/1064
(93 %)
15 diff
(98.6 %id)
BX402303 Placenta Cot 25-normalized .a 26 to 1029 1 to 987 Q196R A197P P201L G202A P203L ...     987/1048
(94 %)
22 diff
(98.0 %id)
BG747119 adenocarcinoma cell line, colon .a 26 to 787 1 to 762       762/762
(100 %)
1 diff
(99.9 %id)
BG823658 adenocarcinoma cell line, colon .a 26 to 901 1 to 876 S127K D128*     876/881
(99 %)
15 diff
(98.3 %id)
AF274025   .a 27 to 1112 7 to 1091 exact tiling clone, AAA   1085/1091
(99 %)
9 diff
(99.2 %id)
BC009831 Ovary, adenocarcinoma .a 27 to 1109 1 to 1083 exact available from MGC, AAA   1083/1083
(100 %)
0 diff
(100 %id)
AA640268   .a 27 to 539 8 to 519       512/520
(98 %)
15 diff
(97.2 %id)
AA635438   .a 27 to 536 8 to 517       510/518
(98 %)
8 diff
(98.5 %id)
NM_020387.2   .a 27 to 1109 1 to 1083 exact RefSeq, AAA   1083/1083
(100 %)
0 diff
(100 %id)
AL545611 placenta, Placenta Cot 25-normalized .a 28 to 1072 1046 to 1 Y9X E20X L29X R31Q F32L ...     1046/1046
(100 %)
19 diff
(98.2 %id)
BE616708 adenocarcinoma, Pancreas .a 29 to 764 8 to 738       731/960
(76 %)
18 diff
(98.2 %id)
BM910117 astrocytoma grade IV, cell line, brain .a 29 to 605 10 to 589       580/1045
(55 %)
18 diff
(98.3 %id)
R46543 breast .a 30 to 381 1 to 357       357/359
(99 %)
10 diff
(97.3 %id)
CV573184 cornea, eye .a 30 to 646 1 to 617       617/617
(100 %)
0 diff
(100 %id)
BX113551 breast .a 31 to 784 35 to 789       755/789
(95 %)
6 diff
(99.3 %id)
CB160385 Liver .a 32 to 555 1 to 524       524/524
(100 %)
0 diff
(100 %id)
BM763767 myeloma .a 33 to 544 1 to 512       512/512
(100 %)
0 diff
(100 %id)
BM782147 myeloma .a 33 to 616 1 to 584       584/584
(100 %)
0 diff
(100 %id)
BM790704 stomach .a 34 to 641 1 to 609       609/609
(100 %)
1 diff
(99.9 %id)
BP264220 small intestine .a 36 to 617 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BG680066 skin, squamous cell carcinoma .a 36 to 908 1 to 875 F174L A175R K176R V177C S178P ...     875/897
(97 %)
20 diff
(97.8 %id)
CB142673 Liver .a 36 to 531 1 to 496       496/496
(100 %)
3 diff
(99.4 %id)
BC033322 Skin, normal .a 37 to 1109 1 to 1073 exact available from MGC, AAA   1073/1073
(100 %)
2 diff
(99.9 %id)
CN429076 embryonic stem cells, DMSO-treated H9 cellline .a 38 to 343 1 to 306       306/311
(98 %)
2 diff
(99.4 %id)
BM821247 stomach .a 38 to 435 1 to 398       398/398
(100 %)
0 diff
(100 %id)
BM829751 stomach .a 38 to 586 1 to 549       549/549
(100 %)
3 diff
(99.5 %id)
BG292330 bladder, transitional cell papilloma, cell line .a 42 to 824 1 to 774       774/778
(99 %)
15 diff
(98.1 %id)
BQ933120 sciatic nerve .a 42 to 766 1 to 736       736/830
(88 %)
15 diff
(98.2 %id)
AF083124 colon .a 43 to 1064 1 to 1022 Q196R A197L G198D Q199R E200S ...     1022/1022
(100 %)
10 diff
(99.1 %id)
BG682384 skin, squamous cell carcinoma .a 43 to 673 1 to 631       631/631
(100 %)
0 diff
(100 %id)
BX385894 Placenta Cot 25-normalized .a 44 to 1083 1027 to 1 E20X L29X R31X I65X N183Y     1027/1027
(100 %)
21 diff
(98.0 %id)
BU597009 mixed (pool of 40 RNAs) .a 44 to 729 1 to 694       694/710
(97 %)
21 diff
(97.1 %id)
AA218693 brain, neuroepithelial cells .a 46 to 432 1 to 389       389/389
(100 %)
3 diff
(99.3 %id)
BG697689 skin .a 46 to 735 1 to 690       690/690
(100 %)
1 diff
(99.9 %id)
BM843476 lymph node, stomach .a 46 to 524 1 to 478       478/478
(100 %)
16 diff
(96.7 %id)
BE745389 adenocarcinoma cell line, ovary .a 47 to 766 1 to 719       719/833
(86 %)
5 diff
(99.4 %id)
BE740183 adenocarcinoma cell line, ovary .a 47 to 774 1 to 725       727/971
(74 %)
16 diff
(98.4 %id)
BE737375 adenocarcinoma, Pancreas .a 48 to 764 1 to 710       710/939
(75 %)
10 diff
(99.0 %id)
BE612430 adenocarcinoma, ovary .a 48 to 519 1 to 472       472/472
(100 %)
0 diff
(100 %id)
BE740128 adenocarcinoma cell line, ovary .a 48 to 550 1 to 525       520/720
(72 %)
25 diff
(96.6 %id)
AA422151 ovarian tumor, ovary .a 49 to 395 1 to 347       347/348
(99 %)
8 diff
(97.8 %id)
R80762 placenta .a 54 to 386 1 to 331       331/332
(99 %)
5 diff
(98.5 %id)
H00272 placenta .a 54 to 286 1 to 232       232/232
(100 %)
3 diff
(98.8 %id)
AA299824 uterus .a 55 to 285 1 to 230       230/230
(100 %)
1 diff
(99.6 %id)
AA337947 endometrium .a 55 to 407 1 to 353       353/353
(100 %)
0 diff
(100 %id)
FN068760 breast carcinoma .a 56 to 136 1 to 80       80/80
(100 %)
4 diff
(95.0 %id)
AA130428 colon, tumor .a 60 to 461 1 to 405       405/408
(99 %)
7 diff
(98.3 %id)
CN429075 embryonic stem cells, DMSO-treated H9 cellline .a 61 to 493 1 to 433       433/439
(98 %)
1 diff
(99.8 %id)
R74141 breast .a 62 to 490 1 to 435       435/534
(81 %)
12 diff
(97.8 %id)
H27844 breast .a 62 to 422 1 to 361       361/366
(98 %)
4 diff
(99.0 %id)
H42269 breast .a 62 to 422 1 to 366       366/407
(89 %)
12 diff
(97.1 %id)
BE182355 head_neck .a 63 to 390 1 to 328       328/328
(100 %)
9 diff
(97.3 %id)
BE182368 head_neck .a 63 to 368 1 to 306       306/311
(98 %)
9 diff
(97.2 %id)
W76510 heart .a 63 to 500 1 to 440   fully sequenced,   440/440
(100 %)
6 diff
(98.7 %id)
BE182291 head_neck .a 75 to 368 1 to 292       292/297
(98 %)
14 diff
(95.3 %id)
BE182304 head_neck .a 81 to 392 1 to 311       311/311
(100 %)
24 diff
(92.3 %id)
BE182309 head_neck .a 83 to 363 1 to 278       278/306
(90 %)
11 diff
(96.5 %id)
BE182295 head_neck .a 84 to 368 1 to 284       284/289
(98 %)
12 diff
(95.9 %id)
BF910100 uterus_tumor .a 88 to 505 1 to 420       420/420
(100 %)
11 diff
(97.4 %id)
CA777834 Pancreas, Purified pancreatic islet .a 89 to 522 1 to 434   fully sequenced,   434/434
(100 %)
0 diff
(100 %id)
CA453957   .a 103 to 976 31 to 914 G204W E205G K206R R207K A208R ...     884/915
(96 %)
21 diff
(97.8 %id)
DN995534 breast cancer, Mammary gland (cancer tissue) .a 108 to 516 1 to 409       409/409
(100 %)
5 diff
(98.8 %id)
CA489548   .a 110 to 967 1 to 873 I173S T187N T191H L192S S194Q ...     873/918
(95 %)
20 diff
(97.9 %id)
AW375797 colon .a 150 to 422 11 to 285       275/290
(94 %)
13 diff
(95.6 %id)
BE612887 adenocarcinoma, ovary .a 193 to 1057 886 to 2 N3M G4P T5L E6S D8E ...     885/1244
(71 %)
32 diff
(97.5 %id)
BM700633 eye, eye anterior segment .a 194 to 336 3 to 145       143/145
(98 %)
10 diff
(93.2 %id)
BG990982 head_neck .a 213 to 685 6 to 479       474/491
(96 %)
13 diff
(97.4 %id)
TI_1948084570   .a 252 to 766 135 to 650       516/1376
(37 %)
26 diff
(98.2 %id)
CV028164 mixed .a 253 to 881 1 to 628       628/628
(100 %)
1 diff
(99.9 %id)
BF883861 lung_tumor .a 255 to 657 1 to 400       400/400
(100 %)
3 diff
(99.3 %id)
CB123876 Liver .a 255 to 759 1 to 504       504/504
(100 %)
1 diff
(99.9 %id)
BF361088 ovary .a 288 to 698 35 to 449       415/449
(92 %)
13 diff
(97.2 %id)
TI_149303169   .a 294 to 1120 896 to 76   AAA   821/964
(85 %)
9 diff
(99.1 %id)
AW796993 uterus .a 295 to 418 137 to 13       125/155
(80 %)
0 diff
(100 %id)
TI_1948084024   .a 295 to 896 729 to 127       603/1098
(54 %)
7 diff
(99.4 %id)
BQ302607 breast .a 318 to 570 43 to 295       253/295
(85 %)
6 diff
(98.0 %id)
TI_149300406   .a 319 to 1109 851 to 62   AAA   790/963
(82 %)
11 diff
(98.9 %id)
AI246699 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 322 to 1111 789 to 1       789/789
(100 %)
13 diff
(98.4 %id)
BQ379465 uterus_tumor .a 329 to 564 240 to 5       236/240
(98 %)
0 diff
(100 %id)
TI_149285199   .a 340 to 1109 857 to 90   AAA   768/1065
(72 %)
4 diff
(99.7 %id)
TI_1948084572   .a 345 to 896 677 to 125       553/1110
(49 %)
17 diff
(98.5 %id)
BM981225 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 347 to 1120 790 to 19   AAA   772/775
(99 %)
3 diff
(99.7 %id)
EC538765 Prostate .a 350 to 440 1 to 91       91/93
(97 %)
1 diff
(99.0 %id)
CV572571 cornea, eye .a 350 to 979 1 to 630       630/630
(100 %)
0 diff
(100 %id)
AW369960 breast .a 353 to 493 1 to 140       140/145
(96 %)
4 diff
(97.3 %id)
BM976479 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 357 to 1109 773 to 19   AAA   755/755
(100 %)
5 diff
(99.4 %id)
TI_1948084296   .a 370 to 896 655 to 126       530/1086
(48 %)
20 diff
(98.2 %id)
BU557744 adenocarcinoma, cell line, breast .a 375 to 1077 1 to 703       703/928
(75 %)
12 diff
(98.8 %id)
BQ316407 colon .a 385 to 674 305 to 16       290/305
(95 %)
2 diff
(99.4 %id)
AW082842 colon, moderately differentiated adenocarcinoma .a 388 to 1109 722 to 1       722/722
(100 %)
22 diff
(97.0 %id)
BQ632861 Pancreas, Purified pancreatic islet .a 398 to 891 1 to 494       494/494
(100 %)
5 diff
(99.0 %id)
AW193967 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 412 to 1109 699 to 1       699/699
(100 %)
14 diff
(98.0 %id)
AI675374 Prostate .a 415 to 1109 698 to 5       694/698
(99 %)
4 diff
(99.5 %id)
CB121566 Liver .a 417 to 938 1 to 522       522/522
(100 %)
1 diff
(99.9 %id)
BQ325167 colon_ins .a 423 to 781 1 to 359       359/362
(99 %)
3 diff
(99.2 %id)
BU789359 insulinoma, Pancreas .a 426 to 716 8 to 298   fully sequenced,   291/298
(97 %)
6 diff
(98.0 %id)
TI_149306674   .a 437 to 1109 760 to 89   AAA   672/928
(72 %)
7 diff
(99.3 %id)
CA440159 lung, Metastatic Chondrosarcoma .a 453 to 1109 674 to 19   AAA   656/656
(100 %)
1 diff
(99.9 %id)
BE962502 adenocarcinoma, ovary .a 456 to 1109 690 to 17   AAA   626/677
(92 %)
43 diff
(93.7 %id)
W71996 heart .a 461 to 1113 655 to 2   fully sequenced,   654/655
(99 %)
6 diff
(99.1 %id)
CA777561 Pancreas, Purified pancreatic islet .a 461 to 1111 652 to 2   fully sequenced,   651/652
(99 %)
0 diff
(100 %id)
BM984733 lung .a 464 to 1109 664 to 19   AAA   646/646
(100 %)
0 diff
(100 %id)
BE937042 stomach_normal .a 466 to 637 184 to 11       174/185
(94 %)
0 diff
(100 %id)
R28405 placenta .a 468 to 685 1 to 220       220/230
(95 %)
4 diff
(98.3 %id)
FN105511 breast carcinoma .a 513 to 577 66 to 1     Submitted on the opposite strand 66/66
(100 %)
2 diff
(97.0 %id)
BF910097 uterus_tumor .a 593 to 756 163 to 1     Submitted on the opposite strand 163/163
(100 %)
5 diff
(97.0 %id)
AA130429 colon, tumor .a 640 to 1079 447 to 1       447/460
(97 %)
12 diff
(97.4 %id)
BU789098 insulinoma, Pancreas .a 655 to 1109 470 to 16   fully sequenced, AAA   455/455
(100 %)
0 diff
(100 %id)
BM672100 eye, eye anterior segment .a 664 to 1109 464 to 19   AAA   446/446
(100 %)
0 diff
(100 %id)
AW974330   .a 682 to 1083 403 to 1     Submitted on the opposite strand 403/404
(99 %)
14 diff
(96.6 %id)
AA837856 colon, colon tumor .a 682 to 1079 399 to 1       399/453
(88 %)
7 diff
(98.5 %id)
BG210911   .a 683 to 923 1 to 241       241/241
(100 %)
12 diff
(95.1 %id)
R80763 placenta .a 686 to 1109 430 to 1       430/457
(94 %)
16 diff
(96.5 %id)
R74048 breast .a 686 to 1109 439 to 1       436/481
(90 %)
28 diff
(94.2 %id)
H42200 breast .a 686 to 1078 405 to 1       403/459
(87 %)
17 diff
(96.3 %id)
AA705978 parathyroid gland, parathyroid tumor .a 687 to 1111 431 to 5       427/444
(96 %)
7 diff
(98.5 %id)
AI075002 colon, colon tumor .a 688 to 1109 423 to 1       423/461
(91 %)
10 diff
(97.9 %id)
BM855310 stomach .a 690 to 967 1 to 278       278/278
(100 %)
1 diff
(99.7 %id)
AW613290 2 pooled high-grade transitional celltumors, genitourinary tract .a 692 to 1111 424 to 5       420/424
(99 %)
0 diff
(100 %id)
H00273 placenta .a 694 to 1109 424 to 1       422/426
(99 %)
14 diff
(96.8 %id)
AA218694 brain, neuroepithelial cells .a 700 to 1110 414 to 1       414/414
(100 %)
6 diff
(98.6 %id)
AA724910 parathyroid gland, parathyroid tumor .a 703 to 1111 413 to 5       409/413
(99 %)
5 diff
(98.8 %id)
H24590 breast .a 710 to 1089 382 to 1       382/385
(99 %)
8 diff
(98.0 %id)
AI141292 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 713 to 1112 401 to 4       398/401
(99 %)
1 diff
(99.8 %id)
FN140308 breast carcinoma .a 717 to 789 8 to 80       73/80
(91 %)
6 diff
(92.5 %id)
H27776 breast .a 718 to 889 172 to 1       172/172
(100 %)
2 diff
(98.9 %id)
H39888 breast .a 719 to 1088 383 to 1       381/400
(95 %)
12 diff
(97.0 %id)
FN064337 breast carcinoma .a 720 to 790 1 to 71       71/71
(100 %)
3 diff
(95.8 %id)
AA812319 epithelium (cell line), Prostate .a 724 to 1109 424 to 39   AAA   386/386
(100 %)
3 diff
(99.3 %id)
CB306287 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 730 to 1109 398 to 19   AAA   380/380
(100 %)
0 diff
(100 %id)
BQ023524 placenta .a 731 to 1109 396 to 18   AAA   379/379
(100 %)
1 diff
(99.8 %id)
AI370123 lung .a 738 to 1111 375 to 2       374/378
(98 %)
4 diff
(99.0 %id)
AI969398 adenocarcinoma, Pancreas .a 750 to 1109 360 to 1       360/360
(100 %)
1 diff
(99.8 %id)
BE718361 head_neck .a 759 to 1074 333 to 18       316/333
(94 %)
0 diff
(100 %id)
BE718360 head_neck .a 771 to 1069 299 to 1       299/299
(100 %)
0 diff
(100 %id)
BF000439 colon, colon tumor, RER+ .a 776 to 1108 333 to 1       333/333
(100 %)
0 diff
(100 %id)
AW974323   .a 812 to 1108 297 to 1     Submitted on the opposite strand 297/297
(100 %)
7 diff
(97.7 %id)
EC471893 Prostate .a 824 to 916 1 to 93       93/93
(100 %)
0 diff
(100 %id)
AI745146 ovary, tumor, 5 pooled (see description) .a 827 to 1120 312 to 19   AAA   294/300
(98 %)
0 diff
(100 %id)
AI745152 ovary, tumor, 5 pooled (see description) .a 827 to 1120 312 to 19   AAA   294/301
(97 %)
3 diff
(99.1 %id)
BF437335 Prostate .a 835 to 1109 275 to 1       275/275
(100 %)
0 diff
(100 %id)
R46544 breast .a 836 to 1111 280 to 5       276/281
(98 %)
0 diff
(100 %id)
AI611303 Prostate .a 841 to 1111 271 to 1       271/271
(100 %)
3 diff
(98.9 %id)
BE718399 head_neck .a 846 to 967 121 to 1       121/121
(100 %)
1 diff
(99.2 %id)
R25382 placenta .a 857 to 1109 257 to 1       257/257
(100 %)
6 diff
(97.7 %id)
AA552205 normal prostatic epithelial cells, Prostate .a 901 to 1111 10 to 220       211/239
(88 %)
1 diff
(99.6 %id)
AI673120 colon, colonic mucosa from 3 patients with Crohn'sdisease .a 927 to 1111 189 to 6       184/189
(97 %)
0 diff
(100 %id)
FN163379 breast carcinoma .a 931 to 1043 1 to 108       108/108
(100 %)
6 diff
(94.5 %id)
AA403293 ovarian tumor, ovary .a 940 to 1112 173 to 1       173/173
(100 %)
0 diff
(100 %id)
AW170372 cervix, tumor .a 957 to 1111 158 to 4       155/158
(98 %)
0 diff
(100 %id)
EC441611 Prostate .a 969 to 1069 1 to 98       98/98
(100 %)
5 diff
(94.9 %id)
AW979325   .a 971 to 1108 139 to 1     Submitted on the opposite strand 139/191
(72 %)
1 diff
(99.5 %id)
EC446438 Prostate .a 1009 to 1111 108 to 7       102/108
(94 %)
0 diff
(100 %id)
EC460666 Prostate .a 1009 to 1111 107 to 7       101/107
(94 %)
0 diff
(100 %id)
EC567428 Prostate .a 1009 to 1108 111 to 14       98/111
(88 %)
0 diff
(100 %id)
CN429077 embryonic stem cells, DMSO-treated H9 cellline .b 1 to 661 1 to 661 Q91L tiling clone,   661/661
(100 %)
2 diff
(99.7 %id)
BQ315940 colon .b 17 to 522 5 to 508   tiling clone,   504/512
(98 %)
19 diff
(96.3 %id)
CK128741 embryonic stem cell, Embryonic stem cells pooled from H7 ES cellline, passage 22 .c 1 to 747 37 to 773 L30F     745/864
(86 %)
19 diff
(97.9 %id)
BM824143 Ascites, stomach .c 1 to 536 4 to 539   tiling clone,   539/539
(100 %)
0 diff
(100 %id)
AA195178 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1 to 294 3 to 294   fully sequenced,   294/294
(100 %)
5 diff
(98.3 %id)
BP358957 mammary gland .c 4 to 586 1 to 583       583/584
(99 %)
5 diff
(99.2 %id)
BI092872 cervix .c 11 to 772 1 to 753 exact     753/754
(99 %)
11 diff
(98.6 %id)
AA533920 invasive prostate tumor, Prostate .c 12 to 503 7 to 495       489/495
(98 %)
15 diff
(97.0 %id)
BE272246 adenocarcinoma cell line, ovary .c 16 to 666 1 to 650       650/650
(100 %)
5 diff
(99.3 %id)
BE742686 adenocarcinoma cell line, ovary .c 16 to 674 1 to 659 exact     659/659
(100 %)
0 diff
(100 %id)
BF035006 adenocarcinoma, ovary .c 16 to 688 1 to 669 F54L A55C K56E V57G S58V ...     669/703
(95 %)
10 diff
(98.6 %id)
BP273680   .c 22 to 571 1 to 550       550/550
(100 %)
7 diff
(98.8 %id)
BM840224 lymph node, stomach .c 29 to 534 1 to 506       506/506
(100 %)
2 diff
(99.7 %id)
BM843169 lymph node, stomach .c 29 to 536 1 to 508       508/508
(100 %)
2 diff
(99.7 %id)
BM843510 lymph node, stomach .c 29 to 610 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BU607656 Human Lung Epithelial cells, lung .c 203 to 881 698 to 19 exact tiling clone, AAA   680/680
(100 %)
2 diff
(99.8 %id)
BQ303054 breast .c 218 to 596 27 to 406       380/406
(93 %)
12 diff
(97.1 %id)
AA195079 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 263 to 884 623 to 1 N27K T71X L72X G73A S74V ... tiling clone, fully sequenced,   623/623
(100 %)
5 diff
(99.2 %id)
FN140776 breast carcinoma .d 1 to 91 1 to 91   tiling clone,   91/91
(100 %)
0 diff
(100 %id)
BE718458 head_neck .d 48 to 454 8 to 411       404/411
(98 %)
6 diff
(98.6 %id)
BE718380 head_neck .d 52 to 586 9 to 542 exact tiling clone,   534/542
(98 %)
6 diff
(98.9 %id)
BE718397 head_neck .d 52 to 586 536 to 1 G84W E85G K86E R87E A88G ...     536/536
(100 %)
4 diff
(99.3 %id)
BE718389 head_neck .d 64 to 297 327 to 91       237/327
(72 %)
0 diff
(100 %id)
BF354952 head_neck .d 64 to 500 492 to 56       437/492
(88 %)
1 diff
(99.8 %id)
BE718455 head_neck .d 81 to 455 10 to 384       375/384
(97 %)
3 diff
(99.3 %id)
BE718465 head_neck .d 81 to 476 35 to 431       397/431
(92 %)
4 diff
(99.1 %id)
AA716086 heart .d 105 to 724 621 to 1 T71X G73W S74Q A75C Q76P ...     621/622
(99 %)
5 diff
(99.2 %id)
AI814617 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .d 105 to 725 625 to 6 E85K     620/626
(99 %)
1 diff
(99.9 %id)
AW025589 Kidney .d 106 to 723 628 to 12 exact AAA   617/631
(97 %)
10 diff
(98.5 %id)
CA778325 Pancreas, Purified pancreatic islet .d 106 to 505 1 to 400       400/400
(100 %)
11 diff
(97.3 %id)
BM978747 lung, Primary Lung Epithelial Cells .d 106 to 723 635 to 19 F46L C89S AAA   617/617
(100 %)
6 diff
(99.1 %id)
AI184954 lung .d 107 to 722 616 to 1 P16A T17N A20G M22N F23V ...     616/616
(100 %)
9 diff
(98.6 %id)
AI669040 colon, colonic mucosa from 3 patients with Crohn'sdisease .d 107 to 725 619 to 2 exact     618/646
(95 %)
4 diff
(99.4 %id)
TI_149314785   .d 107 to 723 690 to 76 G4V A12P T17H E18* AAA   615/930
(66 %)
16 diff
(98.3 %id)
AA579639 colon, colon tumor RER+ .d 110 to 722 612 to 1 T71S L72S     612/612
(100 %)
3 diff
(99.6 %id)
AA808628 carcinoid, lung .d 110 to 725 617 to 2 L72X     616/668
(92 %)
4 diff
(99.5 %id)
BU579813 insulinoma, Pancreas .d 116 to 723 622 to 15 exact AAA   608/608
(100 %)
0 diff
(100 %id)
BE706239 head_neck .d 123 to 665 548 to 4 exact     545/550
(99 %)
1 diff
(99.9 %id)
BC004416 Pancreas, adenocarcinoma .d 125 to 723 1 to 599 exact available from MGC, AAA   599/599
(100 %)
0 diff
(100 %id)
BF354970 head_neck .d 129 to 548 456 to 20 R13Q E14G V15S P16A T17H ...     436/456
(95 %)
7 diff
(98.5 %id)
AA627351 breast .d 137 to 734 608 to 11 exact tiling clone, AAA   598/598
(100 %)
11 diff
(98.2 %id)
AW873020 adrenal gland, neuroblastoma .d 137 to 725 592 to 4 exact     589/592
(99 %)
0 diff
(100 %id)
AI802393   .d 145 to 725 585 to 6 exact     580/588
(98 %)
1 diff
(99.9 %id)
BE736194 adenocarcinoma, Pancreas .d 147 to 720 1 to 561 L2R V3G G4Y N5K K6S ... available from MGC,   561/787
(71 %)
11 diff
(98.7 %id)
AW083504 colon, moderately differentiated adenocarcinoma .d 149 to 723 574 to 1 P83L E85R K86R R87G A88P ...     574/574
(100 %)
1 diff
(99.9 %id)
BQ307620 breast .d 157 to 690 536 to 4 S10I E25V     533/536
(99 %)
4 diff
(99.3 %id)
BQ376754 uterus .d 170 to 422 263 to 11       253/266
(95 %)
1 diff
(99.7 %id)
BE718454 head_neck .d 180 to 570 398 to 12 exact     387/398
(97 %)
0 diff
(100 %id)
AA463354.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 184 to 616 1 to 432 Q76R A77L G78D Q79R E80S ...   also hits gene TRIM38 432/432
(100 %)
1 diff
(99.8 %id)
AA463366.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 184 to 631 1 to 446 T17L E18R E19R A20P R21E ...   also hits gene TOR1A 446/446
(100 %)
3 diff
(99.4 %id)
BE718382 head_neck .d 185 to 587 426 to 30 N5T E33G T34P S35Q A36P ...     397/426
(93 %)
6 diff
(98.6 %id)
AA463870.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 185 to 726 544 to 1 E14K V15C T17L E18R E19G ...   also hits gene ERP44 544/544
(100 %)
13 diff
(97.7 %id)
BE834086 ovary .d 192 to 441 261 to 11       251/261
(96 %)
2 diff
(99.3 %id)
BE834165 ovary .d 192 to 512 1 to 321 N5D C90S     321/340
(94 %)
6 diff
(98.3 %id)
BE834379 ovary .d 192 to 515 320 to 3 A36V K59Q N68M A69P I70S ...     318/320
(99 %)
2 diff
(99.4 %id)
AA463861 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 194 to 726 534 to 1 V3G G4V N5T S7V D8T ...     534/534
(100 %)
5 diff
(99.1 %id)
AI333420 lung .d 194 to 723 530 to 1 R13G E19K G28E E33K     530/530
(100 %)
4 diff
(99.3 %id)
AA858248 epithelium (cell line), Prostate .d 200 to 693 495 to 1 S7G E14K M22N F23V A24R ...     495/495
(100 %)
8 diff
(98.4 %id)
BE718449 head_neck .d 206 to 580 400 to 27 exact     374/400
(93 %)
0 diff
(100 %id)
AW578508 colon .d 214 to 494 1 to 282       282/282
(100 %)
1 diff
(99.7 %id)
AW854205 colon .d 214 to 493 277 to 1       277/277
(100 %)
4 diff
(98.6 %id)
BE927213 colon .d 214 to 597 383 to 1 P16F G28R F46L S92G     383/383
(100 %)
8 diff
(98.0 %id)
BE927262 colon .d 214 to 504 319 to 24       296/319
(92 %)
7 diff
(97.9 %id)
BQ316918 colon .d 214 to 610 402 to 9 S92G     394/402
(98 %)
0 diff
(100 %id)
BY999528   .d 217 to 723 1 to 507 exact   Submitted on the opposite strand 507/511
(99 %)
1 diff
(99.9 %id)
BF884519 lung_tumor .d 219 to 637 439 to 23 L93I   Submitted on the opposite strand 417/439
(94 %)
0 diff
(100 %id)
TI_154001096   .d 240 to 727 569 to 82   AAA   488/838
(58 %)
0 diff
(100 %id)
CA433001 mixed .d 240 to 727 506 to 19   AAA   488/496
(98 %)
0 diff
(100 %id)
AA838506 colon, colon tumor .d 242 to 693 452 to 1       452/452
(100 %)
2 diff
(99.6 %id)
AI284014 esophagus, squamous cell carcinoma .d 242 to 723 481 to 1       481/481
(100 %)
3 diff
(99.4 %id)
AA480665 colon .d 243 to 724 483 to 1       483/489
(98 %)
5 diff
(99.0 %id)
AI269169 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 243 to 725 486 to 3       484/492
(98 %)
8 diff
(98.4 %id)
AA826714 invasive tumor (cell line), Prostate .d 251 to 693 443 to 1       443/443
(100 %)
11 diff
(97.6 %id)
AI538360 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .d 251 to 723 503 to 31   AAA   473/473
(100 %)
21 diff
(95.6 %id)
AA583338 germ cell tumor .d 254 to 694 441 to 1       441/441
(100 %)
3 diff
(99.4 %id)
AA568654 colon, colon tumor RER+ .d 256 to 723 469 to 1       469/471
(99 %)
5 diff
(99.0 %id)
AI445111 colon, moderately-differentiated adenocarcinoma .d 262 to 720 456 to 1       456/458
(99 %)
12 diff
(97.4 %id)
BE076030 breast .d 268 to 488 23 to 244       222/244
(90 %)
9 diff
(96.4 %id)
AA507859 Prostate .d 271 to 723 8 to 459       452/459
(98 %)
16 diff
(96.6 %id)
AA532812 colon .d 272 to 723 453 to 1       453/453
(100 %)
8 diff
(98.3 %id)
BE772247 prostate_tumor .d 275 to 562 19 to 310       292/310
(94 %)
15 diff
(95.2 %id)
BM987996 mixed .d 278 to 723 464 to 19   AAA   446/446
(100 %)
0 diff
(100 %id)
BE718362 head_neck .d 285 to 607 1 to 323       323/323
(100 %)
0 diff
(100 %id)
DB214144 trachea .e 1 to 528 2 to 529 exact tiling clone, capped   528/528
(100 %)
0 diff
(100 %id)
CK429403 eye, lacrimal gland .e 9 to 635 1 to 628 exact tiling clone,   628/628
(100 %)
1 diff
(99.9 %id)
AW751490 colon .e 358 to 554 31 to 223       193/223
(86 %)
6 diff
(97.4 %id)
BU954821 mixed (pool of 40 RNAs) .f 1 to 442 1 to 443   tiling clone,   443/727
(60 %)
6 diff
(99.2 %id)
BP330162 rectum .f 4 to 590 1 to 587 exact     587/587
(100 %)
1 diff
(99.9 %id)
BP273992   .f 5 to 557 1 to 553 exact     553/553
(100 %)
2 diff
(99.7 %id)
BM811535 astrocytoma grade IV, cell line, brain .f 47 to 908 1 to 864 exact tiling clone,   864/874
(98 %)
7 diff
(99.2 %id)
CU445596 epidermis .f 460 to 637 28 to 205       178/207
(85 %)
10 diff
(95.2 %id)
BE182273 head_neck Gene RAB25, variant not shown         Suspected internal deletion, this clone was ignored    
BG977793 colon_ins Gene RAB25, variant not shown         This clone was ignored    
CN429078 embryonic stem cells, cell lines H1, H7, andH9 Gene RAB25, variant not shown         Suspected internal deletion, this clone was ignored    
N93392 lung Gene RAB25, variant not shown         Suspected internal deletion, this clone was ignored    
W25368 lung Gene RAB25, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI