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Gene R3HDM1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
356 supporting clones for gene R3HDM1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA233962 brain R3HDM1.a 1 to 585 2 to 586   tiling clone, capped   585/585
(100 %)
0 diff
(100 %id)
DA324823 hippocampus R3HDM1.a 72 to 378 2 to 308   capped   307/307
(100 %)
1 diff
(99.7 %id)
DA240307 brain R3HDM1.a 88 to 682 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
DA187863 amygdala R3HDM1.a 92 to 637 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
BP194300 brain R3HDM1.a 93 to 674 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA414052 thalamus R3HDM1.a 94 to 664 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DN989857 brain, whole brain R3HDM1.a 98 to 710 1 to 613       613/613
(100 %)
4 diff
(99.4 %id)
DB498805 hypothalamus R3HDM1.a 102 to 612 1 to 511       511/511
(100 %)
10 diff
(98.1 %id)
DB505441 hypothalamus R3HDM1.a 102 to 564 1 to 463       463/463
(100 %)
2 diff
(99.6 %id)
DA249721 brain R3HDM1.a 103 to 684 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
DA338441 hippocampus R3HDM1.a 103 to 671 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA515797 brain R3HDM1.a 103 to 652 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA526973 brain R3HDM1.a 103 to 666 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA811304 brain R3HDM1.a 103 to 670 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
DA518631 brain R3HDM1.a 104 to 674 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA416439 thalamus R3HDM1.a 126 to 685 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
BP231084 brain R3HDM1.a 126 to 706 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
AK290015 hippocampus R3HDM1.a 187 to 3859 1 to 3673 K125E K903R S1076L tiling clone,   3673/3673
(100 %)
4 diff
(99.9 %id)
DA195513 amygdala R3HDM1.a 188 to 748 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA330411 hippocampus R3HDM1.a 188 to 750 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB232545 trachea R3HDM1.b 1 to 598 2 to 600   tiling clone, capped   599/599
(100 %)
1 diff
(99.9 %id)
AL701741 human skeletal muscle R3HDM1.b 4 to 592 1 to 588       588/588
(100 %)
2 diff
(99.7 %id)
BC041093 Uterus, leiomyosarcoma R3HDM1.b 29 to 4674 1 to 4646 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 4646/4646
(100 %)
1 diff
(100.0 %id)
BM905885 leiomyosarcoma, uterus R3HDM1.b 29 to 825 12 to 812       801/1060
(75 %)
19 diff
(98.3 %id)
NM_015361.2   R3HDM1.b 29 to 4674 1 to 4646 exact RefSeq, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 4646/4646
(100 %)
1 diff
(100.0 %id)
DA806574 brain R3HDM1.b 184 to 760 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
BP277788   R3HDM1.b 317 to 904 1 to 587       587/588
(99 %)
10 diff
(98.3 %id)
DA415549 thalamus R3HDM1.b 427 to 1074 2 to 649   capped   648/648
(100 %)
0 diff
(100 %id)
BP337565 coronary artery R3HDM1.b 435 to 1018 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
CN307031 embryonic stem cells, cell lines H1, H7, andH9 R3HDM1.b 692 to 1386 1 to 695       695/695
(100 %)
0 diff
(100 %id)
BP251421 hippocampus R3HDM1.b 1090 to 1671 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA242216 brain R3HDM1.b 1121 to 1714 2 to 595   capped   594/595
(99 %)
1 diff
(99.9 %id)
DA804534 brain R3HDM1.b 1169 to 1640 2 to 473   capped   472/472
(100 %)
0 diff
(100 %id)
DB087332 testis R3HDM1.b 1290 to 1850 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB072503 testis R3HDM1.b 1292 to 1827 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DA240631 brain R3HDM1.b 1326 to 1913 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
DA790086 brain R3HDM1.b 1330 to 1898 2 to 570   capped   569/569
(100 %)
5 diff
(99.2 %id)
DA799728 brain R3HDM1.b 1332 to 1874 2 to 546   capped   545/545
(100 %)
4 diff
(99.3 %id)
AL705457 human skeletal muscle R3HDM1.b 1726 to 2165 1 to 440       440/440
(100 %)
1 diff
(99.8 %id)
AW897031 nervous_normal R3HDM1.b 1793 to 1946 157 to 4       154/157
(98 %)
1 diff
(99.4 %id)
BQ219803 large cell carcinoma, lung R3HDM1.b 1827 to 2749 1 to 928       928/1004
(92 %)
14 diff
(98.7 %id)
F11920 brain, total brain R3HDM1.b 2596 to 2906 1 to 310       310/310
(100 %)
6 diff
(98.1 %id)
F09566 brain, total brain R3HDM1.b 4418 to 4674 257 to 1       257/257
(100 %)
0 diff
(100 %id)
AK127793 brain R3HDM1.c 1 to 4339 2 to 4340 Q577P tiling clone, available from FLJ,   4340/4340
(100 %)
1 diff
(100.0 %id)
DA808096 brain R3HDM1.c 1 to 576 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
AU128480   R3HDM1.c 1051 to 1729 2 to 685   capped   684/684
(100 %)
9 diff
(98.7 %id)
AA682254 schizophrenic brain S-11 frontal lobe R3HDM1.c 1428 to 1831 406 to 1       406/406
(100 %)
5 diff
(98.8 %id)
AU128491   R3HDM1.c 1677 to 2315 2 to 642   tiling clone, capped   641/641
(100 %)
2 diff
(99.7 %id)
AA100742 colon, tumor R3HDM1.c 3001 to 3492 1 to 498       498/498
(100 %)
11 diff
(97.8 %id)
BF030214 hypernephroma, Kidney R3HDM1.c 3033 to 3637 1 to 597       597/844
(70 %)
17 diff
(98.0 %id)
BG611085 adenocarcinoma, Prostate R3HDM1.c 3079 to 3779 1 to 702       702/707
(99 %)
8 diff
(98.9 %id)
BG259094 embryonal carcinoma, cell line, testis R3HDM1.c 3177 to 3916 1 to 735       735/976
(75 %)
24 diff
(97.6 %id)
BI759063 pooled colon, kidney, stomach R3HDM1.c 3180 to 4007 1 to 828       828/828
(100 %)
2 diff
(99.8 %id)
TI_57146206   R3HDM1.c 3180 to 4007 70 to 897       828/897
(92 %)
6 diff
(99.4 %id)
BF748254 breast_normal R3HDM1.c 3181 to 3653 1 to 475       475/475
(100 %)
17 diff
(96.5 %id)
BF811499 colon_ins R3HDM1.c 3187 to 3352 1 to 166       166/166
(100 %)
6 diff
(96.4 %id)
BQ324939 colon_ins R3HDM1.c 3192 to 3553 1 to 364       364/367
(99 %)
6 diff
(98.4 %id)
BF811498 colon_ins R3HDM1.c 3197 to 3371 6 to 173       168/173
(97 %)
6 diff
(96.6 %id)
BE676654 B-cell, chronic lymphotic leukemia R3HDM1.c 3214 to 3906 693 to 1       693/693
(100 %)
6 diff
(99.2 %id)
BE092885 breast R3HDM1.c 3246 to 3676 1 to 435       435/439
(99 %)
7 diff
(98.5 %id)
BM762201 myeloma R3HDM1.c 3246 to 3841 1 to 596       596/596
(100 %)
0 diff
(100 %id)
EC442832 Prostate R3HDM1.c 3265 to 3368 108 to 6       103/108
(95 %)
0 diff
(100 %id)
W05758 lung R3HDM1.c 3270 to 3655 1 to 386       386/386
(100 %)
2 diff
(99.5 %id)
CB161213 Liver R3HDM1.c 3273 to 3765 1 to 493       493/493
(100 %)
1 diff
(99.8 %id)
BG166726 hypernephroma, cell line, Kidney R3HDM1.c 3274 to 3948 15 to 688       674/688
(97 %)
6 diff
(99.2 %id)
BI439135 Pancreas, Purified pancreatic islet R3HDM1.c 3279 to 3779 11 to 511       501/511
(98 %)
6 diff
(98.9 %id)
F11892 brain, total brain R3HDM1.c 3308 to 3683 1 to 376       376/376
(100 %)
0 diff
(100 %id)
F11908 brain, total brain R3HDM1.c 3308 to 3637 1 to 330       330/330
(100 %)
0 diff
(100 %id)
T65519 whole brain R3HDM1.c 3308 to 3884 1 to 582       582/583
(99 %)
29 diff
(95.1 %id)
T65469 whole brain R3HDM1.c 3309 to 3736 1 to 441     Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 441/533
(82 %)
15 diff
(97.2 %id)
CN485315 eye R3HDM1.c 3312 to 3949 1 to 638       638/638
(100 %)
3 diff
(99.6 %id)
AW949493   R3HDM1.c 3393 to 4053 1 to 661       661/661
(100 %)
0 diff
(100 %id)
AW949495   R3HDM1.c 3393 to 3814 1 to 425       425/425
(100 %)
26 diff
(93.9 %id)
T28460 Kidney R3HDM1.c 3394 to 3757 1 to 364       364/364
(100 %)
1 diff
(99.8 %id)
D52664   R3HDM1.c 3413 to 3848 1 to 434       434/434
(100 %)
3 diff
(99.4 %id)
BG502255 embryonal carcinoma, testis R3HDM1.c 3416 to 4057 1 to 642       642/642
(100 %)
0 diff
(100 %id)
BF667173 brain, primitive neuroectoderm R3HDM1.c 3428 to 4110 1 to 668       668/773
(86 %)
25 diff
(96.8 %id)
BF696889 brain, primitive neuroectoderm R3HDM1.c 3428 to 4110 1 to 672       672/708
(94 %)
30 diff
(95.8 %id)
AW580753 leiomios R3HDM1.c 3435 to 4024 603 to 13       591/603
(98 %)
0 diff
(100 %id)
BF811466 colon_ins R3HDM1.c 3435 to 3547 1 to 114       114/114
(100 %)
5 diff
(95.7 %id)
BG256469 embryonal carcinoma, cell line, testis R3HDM1.c 3442 to 4228 1 to 772       772/955
(80 %)
22 diff
(97.7 %id)
CN307027 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells R3HDM1.c 3454 to 4177 1 to 724       724/724
(100 %)
0 diff
(100 %id)
D52271   R3HDM1.c 3493 to 3970 1 to 475       475/479
(99 %)
4 diff
(99.2 %id)
CA775123 Pancreas, Purified pancreatic islet R3HDM1.c 3555 to 4340 13 to 798   fully sequenced,   786/798
(98 %)
1 diff
(99.9 %id)
AW748688 breast R3HDM1.c 3557 to 3747 191 to 1       191/191
(100 %)
2 diff
(99.0 %id)
AW381503 head_neck R3HDM1.c 3561 to 3694 1 to 135       135/135
(100 %)
5 diff
(96.3 %id)
AW022115 cochlea, ear R3HDM1.c 3573 to 4065 10 to 503       494/503
(98 %)
6 diff
(98.9 %id)
TI_149289036   R3HDM1.c 3576 to 4337 835 to 87   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 749/793
(94 %)
19 diff
(97.7 %id)
AW381483 head_neck R3HDM1.c 3584 to 3747 1 to 163       163/163
(100 %)
2 diff
(98.8 %id)
TI_149272578   R3HDM1.c 3625 to 4316 65 to 756     Submitted on the opposite strand 692/1103
(62 %)
6 diff
(99.5 %id)
TI_149277194   R3HDM1.c 3625 to 4316 66 to 756     Submitted on the opposite strand 691/812
(85 %)
8 diff
(99.1 %id)
BU675100 lung, Primary Lung Epithelial Cells R3HDM1.c 3630 to 4316 1 to 687     Submitted on the opposite strand 687/702
(97 %)
3 diff
(99.6 %id)
BM968051 lung, Primary Lung Epithelial Cells R3HDM1.c 3630 to 4316 1 to 686     Submitted on the opposite strand 686/706
(97 %)
5 diff
(99.3 %id)
TI_154124952   R3HDM1.c 3639 to 4339 770 to 79   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 692/948
(72 %)
18 diff
(98.2 %id)
AW590247 pooled germ cell tumors R3HDM1.c 3640 to 4052 1 to 413     Submitted on the opposite strand 413/413
(100 %)
0 diff
(100 %id)
CA311029 Human Lung Epithelial cells, lung R3HDM1.c 3643 to 4339 712 to 17   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 696/696
(100 %)
2 diff
(99.8 %id)
BF110733 carcinoid, lung R3HDM1.c 3648 to 4181 1 to 535     Submitted on the opposite strand 535/535
(100 %)
4 diff
(99.3 %id)
AA996382 carcinoid, lung R3HDM1.c 3649 to 3951 1 to 303     Submitted on the opposite strand 303/303
(100 %)
0 diff
(100 %id)
AL134246 brain R3HDM1.c 3695 to 4038 1 to 344       344/344
(100 %)
2 diff
(99.5 %id)
BU521244 leiomyosarcoma, uterus R3HDM1.c 3707 to 4347 1 to 644   AAA   644/659
(97 %)
7 diff
(99.0 %id)
CN478956 Human Lung Epithelial cells, lung R3HDM1.c 3710 to 4340 650 to 18       633/650
(97 %)
0 diff
(100 %id)
AW973355   R3HDM1.c 3716 to 4338 625 to 1     Submitted on the opposite strand 625/625
(100 %)
5 diff
(99.2 %id)
BG528639 adenocarcinoma, Prostate R3HDM1.c 3718 to 4333 1 to 624   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 624/624
(100 %)
16 diff
(97.5 %id)
BF357576 head_neck R3HDM1.c 3726 to 4140 20 to 431       412/431
(95 %)
6 diff
(98.7 %id)
BM970644 lung R3HDM1.c 3738 to 4337 613 to 15   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 599/599
(100 %)
1 diff
(99.9 %id)
AW902897 nervous_normal R3HDM1.c 3759 to 4045 1 to 288       288/288
(100 %)
1 diff
(99.7 %id)
C15656   R3HDM1.c 3763 to 3983 1 to 222       222/222
(100 %)
5 diff
(97.8 %id)
D52230   R3HDM1.c 3763 to 4119 1 to 357       357/357
(100 %)
1 diff
(99.8 %id)
AU150764   R3HDM1.c 3766 to 4341 571 to 1       571/571
(100 %)
11 diff
(98.1 %id)
AU150774   R3HDM1.c 3793 to 4339 548 to 1       548/548
(100 %)
13 diff
(97.7 %id)
AA824294   R3HDM1.c 3794 to 4338 547 to 3       545/547
(99 %)
0 diff
(100 %id)
BE856664 pooled R3HDM1.c 3810 to 4340 538 to 8       531/538
(98 %)
0 diff
(100 %id)
CA415958 Chondrosarcoma Cell line R3HDM1.c 3817 to 4339 536 to 17   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 520/520
(100 %)
5 diff
(99.1 %id)
AI983468 adenocarcinoma, Pancreas R3HDM1.c 3826 to 4340 515 to 1       515/515
(100 %)
0 diff
(100 %id)
AI554735 anaplastic oligodendroglioma, brain R3HDM1.c 3830 to 4338 515 to 7       509/515
(98 %)
0 diff
(100 %id)
AI640314 Kidney R3HDM1.c 3830 to 4339 524 to 16   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 509/509
(100 %)
1 diff
(99.9 %id)
BG149999 carcinoid, lung R3HDM1.c 3849 to 4340 495 to 4       492/495
(99 %)
0 diff
(100 %id)
AI952088 lung, two pooled squamous cell carcinomas R3HDM1.c 3855 to 4339 502 to 17   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 486/486
(100 %)
1 diff
(99.8 %id)
CB962486 Blood vessels - aorta, basilar and artery R3HDM1.c 3858 to 4341 1 to 484   tiling clone,   484/489
(98 %)
2 diff
(99.6 %id)
BF194945 Kidney R3HDM1.c 3862 to 4341 485 to 7       479/485
(98 %)
0 diff
(100 %id)
DB552896 hippocampus R3HDM1.c 3884 to 4333 1 to 452     Submitted on the opposite strand 452/452
(100 %)
4 diff
(99.2 %id)
AI814090 adenocarcinoma, Pancreas R3HDM1.c 3886 to 4340 457 to 3       455/457
(99 %)
0 diff
(100 %id)
AI138870   R3HDM1.c 3887 to 4333 462 to 16   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 447/456
(98 %)
0 diff
(100 %id)
AA609327   R3HDM1.c 3894 to 4338 453 to 9       445/453
(98 %)
0 diff
(100 %id)
AI150121   R3HDM1.c 3897 to 4340 448 to 5       444/448
(99 %)
0 diff
(100 %id)
AI272179 brain, oligodendroglioma R3HDM1.c 3898 to 4338 447 to 8       440/447
(98 %)
0 diff
(100 %id)
AI419397 brain, glioblastoma (pooled) R3HDM1.c 3909 to 4333 425 to 1       425/425
(100 %)
0 diff
(100 %id)
AI802737 colon, colonic mucosa from 5 ulcerative colitispatients R3HDM1.c 3921 to 4340 426 to 7       420/426
(98 %)
0 diff
(100 %id)
AI004010   R3HDM1.c 3922 to 4337 431 to 16   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 416/416
(100 %)
1 diff
(99.8 %id)
AI276531 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus R3HDM1.c 3925 to 4339 415 to 1       415/415
(100 %)
0 diff
(100 %id)
AI802718 colon, colonic mucosa from 5 ulcerative colitispatients R3HDM1.c 3930 to 4340 418 to 8       411/418
(98 %)
0 diff
(100 %id)
AA558577 germ cell tumor R3HDM1.c 3931 to 4308 378 to 1       378/378
(100 %)
0 diff
(100 %id)
T65437 whole brain R3HDM1.c 3934 to 4340 439 to 20       420/459
(91 %)
0 diff
(100 %id)
BF056322 pooled R3HDM1.c 3934 to 4339 420 to 14   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 407/407
(100 %)
1 diff
(99.8 %id)
AI424477 Prostate R3HDM1.c 3941 to 4340 400 to 1       400/400
(100 %)
0 diff
(100 %id)
BQ011745 placenta R3HDM1.c 3941 to 4341 417 to 17   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 401/401
(100 %)
0 diff
(100 %id)
AA948164 pooled germ cell tumors R3HDM1.c 3955 to 4341 387 to 1       387/387
(100 %)
0 diff
(100 %id)
DB513797 testis R3HDM1.c 3956 to 4339 1 to 386     Submitted on the opposite strand 386/386
(100 %)
4 diff
(99.0 %id)
AI796020 Kidney R3HDM1.c 3957 to 4341 386 to 1       386/386
(100 %)
5 diff
(98.8 %id)
AA471019 colon R3HDM1.c 3963 to 4340 378 to 1       378/378
(100 %)
0 diff
(100 %id)
AA832377 germinal center B cell R3HDM1.c 3963 to 4340 386 to 9       378/386
(97 %)
0 diff
(100 %id)
C14573   R3HDM1.c 3979 to 4337 360 to 1       360/364
(98 %)
2 diff
(99.5 %id)
C14560   R3HDM1.c 3980 to 4341 359 to 1       359/359
(100 %)
11 diff
(97.0 %id)
T65393 whole brain R3HDM1.c 3995 to 4339 373 to 22   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 352/356
(98 %)
8 diff
(97.8 %id)
AA962691 colon, colon tumor R3HDM1.c 3997 to 4308 311 to 1       311/311
(100 %)
1 diff
(99.7 %id)
BX114773 whole brain R3HDM1.c 4008 to 4340 346 to 14       333/351
(94 %)
0 diff
(100 %id)
AI952674 normal epithelium, ovary R3HDM1.c 4032 to 4337 306 to 1       306/307
(99 %)
2 diff
(99.4 %id)
AW902839 nervous_normal R3HDM1.c 4037 to 4200 165 to 1       165/165
(100 %)
3 diff
(98.2 %id)
AA514884 colon R3HDM1.c 4039 to 4341 312 to 10       303/312
(97 %)
0 diff
(100 %id)
AI420196 Prostate R3HDM1.c 4041 to 4280 306 to 67       240/306
(78 %)
0 diff
(100 %id)
T23632   R3HDM1.c 4045 to 4340 299 to 3       297/299
(99 %)
0 diff
(100 %id)
F09539 brain, total brain R3HDM1.c 4046 to 4339 294 to 1       294/294
(100 %)
0 diff
(100 %id)
AI267248 brain, frontal lobe (see description) R3HDM1.c 4050 to 4230 19 to 199       181/199
(90 %)
6 diff
(97.0 %id)
AI420384 Prostate R3HDM1.c 4054 to 4339 286 to 1       286/286
(100 %)
0 diff
(100 %id)
AI973008 Prostate R3HDM1.c 4054 to 4339 286 to 1       286/286
(100 %)
3 diff
(99.0 %id)
BF437676 Prostate R3HDM1.c 4054 to 4339 286 to 1       286/286
(100 %)
0 diff
(100 %id)
AI867254 colon, colon tumor, RER+ R3HDM1.c 4060 to 4340 283 to 3       281/286
(98 %)
0 diff
(100 %id)
H40367 brain R3HDM1.c 4069 to 4338 1 to 270       270/271
(99 %)
1 diff
(99.7 %id)
C14729   R3HDM1.c 4081 to 4337 257 to 1       257/257
(100 %)
3 diff
(98.9 %id)
F09555 brain, total brain R3HDM1.c 4088 to 4339 252 to 1       252/252
(100 %)
2 diff
(99.3 %id)
AW768790 colon, moderately-differentiated adenocarcinoma R3HDM1.c 4090 to 4340 252 to 2       251/253
(99 %)
0 diff
(100 %id)
AI872720 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus R3HDM1.c 4137 to 4340 209 to 5       205/210
(97 %)
0 diff
(100 %id)
AW188798 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus R3HDM1.c 4248 to 4339 103 to 12   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 92/92
(100 %)
0 diff
(100 %id)
CA774854 Pancreas, Purified pancreatic islet R3HDM1.c 4271 to 4337 73 to 7   fully sequenced,   67/73
(91 %)
7 diff
(90.5 %id)
CN307021 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells R3HDM1.d 1 to 727 3 to 729   tiling clone,   729/729
(100 %)
0 diff
(100 %id)
BP315231 mammary gland R3HDM1.d 1 to 575 3 to 577       577/581
(99 %)
9 diff
(98.5 %id)
BP315285 mammary gland R3HDM1.d 1 to 571 3 to 573       573/582
(98 %)
2 diff
(99.7 %id)
DA110566 cerebellum R3HDM1.d 1 to 570 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BP359428 mammary gland R3HDM1.d 1 to 582 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP363923 lung R3HDM1.d 1 to 570 1 to 570       570/583
(97 %)
1 diff
(99.9 %id)
DA213486 brain R3HDM1.d 2 to 552 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA720531   R3HDM1.d 2 to 556 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA721513   R3HDM1.d 2 to 570 2 to 572   capped   571/572
(99 %)
3 diff
(99.5 %id)
DA852896 placenta R3HDM1.d 2 to 556 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DB065914 testis R3HDM1.d 2 to 558 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DB160466 thymus R3HDM1.d 2 to 583 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DB081441 testis R3HDM1.d 17 to 561 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
D21852   R3HDM1.d 18 to 4289 1 to 4272 M226V tiling clone, available from KIAA,   4272/4272
(100 %)
1 diff
(100.0 %id)
DB448657 testis R3HDM1.d 18 to 432 1 to 417       417/417
(100 %)
7 diff
(98.4 %id)
CN307025 embryonic stem cells, cell lines H1, H7, andH9 R3HDM1.d 21 to 321 1 to 301       301/301
(100 %)
1 diff
(99.7 %id)
DB065819 testis R3HDM1.d 27 to 606 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
BQ227410 embryonal carcinoma, cell line, testis R3HDM1.d 36 to 913 1 to 890       890/910
(97 %)
15 diff
(98.4 %id)
BP247044 Kidney R3HDM1.d 61 to 642 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA448177 tongue, tumor tissue R3HDM1.d 92 to 661 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
AW162924 brain, frontal lobe R3HDM1.d 143 to 477 33 to 368       336/368
(91 %)
10 diff
(97.3 %id)
BG207515   R3HDM1.d 149 to 428 281 to 3     Submitted on the opposite strand 279/283
(98 %)
0 diff
(100 %id)
BU930784 Prostate R3HDM1.d 201 to 638 1 to 438       438/438
(100 %)
3 diff
(99.4 %id)
FN046809 breast carcinoma R3HDM1.d 213 to 318 106 to 1     Submitted on the opposite strand 106/106
(100 %)
0 diff
(100 %id)
FN075471 breast carcinoma R3HDM1.d 213 to 318 103 to 1     Submitted on the opposite strand 103/103
(100 %)
3 diff
(97.1 %id)
TI_149285342   R3HDM1.d 307 to 1131 899 to 79   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 821/900
(91 %)
11 diff
(98.8 %id)
FN128427 breast carcinoma R3HDM1.d 326 to 433 1 to 108       108/108
(100 %)
0 diff
(100 %id)
FN102159 breast carcinoma R3HDM1.d 350 to 430 1 to 80       80/81
(98 %)
2 diff
(97.6 %id)
BM984783 lung R3HDM1.d 527 to 1131 607 to 4   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 604/607
(99 %)
0 diff
(100 %id)
BP233907 coronary artery R3HDM1.d 596 to 1183 1 to 589       589/589
(100 %)
1 diff
(99.9 %id)
AW814877 stomach R3HDM1.d 622 to 990 232 to 600       369/600
(61 %)
12 diff
(98.0 %id)
BQ339982 nervous_normal R3HDM1.d 656 to 1054 430 to 31       400/431
(92 %)
18 diff
(95.9 %id)
DB068103 testis R3HDM1.d 679 to 1225 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
BP238348 Liver R3HDM1.d 681 to 1264 1 to 584       584/610
(95 %)
23 diff
(96.3 %id)
TI_154150870   R3HDM1.d 683 to 1445 80 to 842       763/764
(99 %)
2 diff
(99.8 %id)
BU429715 lymph R3HDM1.d 684 to 1316 9 to 641       633/641
(98 %)
7 diff
(99.0 %id)
BP283549 bone marrow R3HDM1.d 686 to 1269 1 to 583   tiling clone,   583/583
(100 %)
1 diff
(99.9 %id)
DA106314 cerebellum R3HDM1.d 738 to 1299 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
BG169141 hypernephroma, cell line, Kidney R3HDM1.d 753 to 1489 1 to 737       737/923
(79 %)
33 diff
(96.5 %id)
AK297000 tongue, tumor tissue R3HDM1.d 802 to 3845 1 to 3044       3044/3044
(100 %)
0 diff
(100 %id)
DC348405 tongue, tumor tissue R3HDM1.d 802 to 1382 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DA810055 brain R3HDM1.d 803 to 1343 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA801675 brain R3HDM1.d 849 to 1336 2 to 489   capped   488/488
(100 %)
0 diff
(100 %id)
DB165436 thymus R3HDM1.d 856 to 1427 2 to 573   capped   572/572
(100 %)
3 diff
(99.5 %id)
CN307022 embryonic stem cells, cell lines H1, H7, andH9 R3HDM1.d 861 to 1639 1 to 779       779/779
(100 %)
3 diff
(99.7 %id)
BP336142 coronary artery R3HDM1.d 870 to 1450 1 to 582       582/582
(100 %)
7 diff
(98.8 %id)
BF772838 epid_tumor R3HDM1.d 924 to 1286 1 to 363       363/363
(100 %)
2 diff
(99.5 %id)
AW993017 breast_normal R3HDM1.d 930 to 1142 218 to 5     Submitted on the opposite strand 214/218
(98 %)
1 diff
(99.6 %id)
DA725374   R3HDM1.d 945 to 1502 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
AA334056   R3HDM1.d 975 to 1170 1 to 196       196/198
(98 %)
2 diff
(99.0 %id)
DB233996 trachea R3HDM1.d 979 to 1575 2 to 599   capped   598/598
(100 %)
2 diff
(99.7 %id)
DB121952 thymus R3HDM1.d 1054 to 1575 2 to 523   capped   522/522
(100 %)
1 diff
(99.9 %id)
DA725362   R3HDM1.d 1062 to 1604 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA962095 Spleen R3HDM1.d 1092 to 1587 2 to 498   capped   497/497
(100 %)
1 diff
(99.8 %id)
CN307028 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells R3HDM1.d 1122 to 1855 1 to 737       737/737
(100 %)
8 diff
(99.0 %id)
BF844102 head_neck R3HDM1.d 1234 to 1571 335 to 3     Submitted on the opposite strand 333/338
(98 %)
5 diff
(98.6 %id)
CN307023 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells R3HDM1.d 1245 to 1748 1 to 504       504/504
(100 %)
1 diff
(99.9 %id)
H95581 liver and spleen R3HDM1.d 1320 to 1607 345 to 57   AAA   289/326
(88 %)
1 diff
(99.7 %id)
CN307033 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells R3HDM1.d 1508 to 2109 1 to 602       602/602
(100 %)
4 diff
(99.4 %id)
DA525608 brain R3HDM1.d 1516 to 2074 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
AU124193   R3HDM1.d 1593 to 2369 2 to 779   capped   778/857
(90 %)
5 diff
(99.5 %id)
DA499695 brain R3HDM1.d 1707 to 2274 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
BE889223 leiomyosarcoma, uterus R3HDM1.d 1770 to 2326 1 to 555       555/555
(100 %)
4 diff
(99.3 %id)
BP350807   R3HDM1.d 1817 to 2398 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
CN307032 embryonic stem cells, DMSO-treated H9 cellline R3HDM1.d 1825 to 2506 1 to 682       682/682
(100 %)
6 diff
(99.2 %id)
AL119594 amygdala R3HDM1.d 1837 to 2088 1 to 252       252/252
(100 %)
1 diff
(99.7 %id)
BI000546 head_normal R3HDM1.d 1845 to 2064 269 to 51       219/269
(81 %)
1 diff
(99.7 %id)
DA068452 cerebellum R3HDM1.d 1866 to 2438 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DA523896 brain R3HDM1.d 1873 to 2443 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
BP217797 caudate nucleus R3HDM1.d 1898 to 2473 1 to 577       577/583
(98 %)
8 diff
(98.7 %id)
DA393135 thalamus R3HDM1.d 1918 to 2511 2 to 596   capped   595/595
(100 %)
1 diff
(99.9 %id)
DA769712 brain R3HDM1.d 1930 to 2503 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BI000545 head_normal R3HDM1.d 1937 to 2064 157 to 30       128/202
(63 %)
0 diff
(100 %id)
BU170798 eye, retinoblastoma R3HDM1.d 1947 to 2815 1 to 872       872/925
(94 %)
25 diff
(97.3 %id)
DA574667   R3HDM1.d 2011 to 2568 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
BP235027 coronary artery R3HDM1.d 2012 to 2591 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DA365430 subthalamic nucleus R3HDM1.d 2014 to 2581 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DB109291 thymus R3HDM1.d 2016 to 2593 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA166043 amygdala R3HDM1.d 2023 to 2588 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
CB148708 Liver R3HDM1.d 2023 to 2528 1 to 506       506/506
(100 %)
3 diff
(99.5 %id)
EC550987 Prostate R3HDM1.d 2054 to 2124 34 to 104       71/104
(68 %)
0 diff
(100 %id)
BF352956 head_neck R3HDM1.d 2059 to 2514 11 to 465       455/465
(97 %)
6 diff
(98.8 %id)
AA633606 schizophrenic brain S-11 frontal lobe R3HDM1.d 2070 to 2631 1 to 562     Submitted on the opposite strand 562/562
(100 %)
3 diff
(99.5 %id)
BP240720 Liver R3HDM1.d 2087 to 2622 1 to 536       536/572
(93 %)
25 diff
(95.7 %id)
AK026987   R3HDM1.d 2097 to 4285 1 to 2189   available from FLJ, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 2189/2189
(100 %)
3 diff
(99.9 %id)
AW862540 colon R3HDM1.d 2099 to 2449 362 to 12       351/362
(96 %)
2 diff
(99.5 %id)
EC522458 Prostate R3HDM1.d 2113 to 2211 98 to 2       97/98
(98 %)
0 diff
(100 %id)
BF903352 marrow R3HDM1.d 2165 to 2446 288 to 7     Submitted on the opposite strand 282/288
(97 %)
0 diff
(100 %id)
BQ300781 bladder_tumor R3HDM1.d 2165 to 2448 298 to 6       293/298
(98 %)
9 diff
(97.0 %id)
CN307030 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 R3HDM1.d 2178 to 2841 1 to 666       666/666
(100 %)
2 diff
(99.7 %id)
CN307024 embryonic stem cells, DMSO-treated H9 cellline R3HDM1.d 2187 to 2835 1 to 649       649/649
(100 %)
2 diff
(99.7 %id)
DA533989 brain R3HDM1.d 2209 to 2765 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
T65195 whole brain R3HDM1.d 2214 to 2603 1 to 392       392/457
(85 %)
16 diff
(96.5 %id)
BP250633 hippocampus R3HDM1.d 2219 to 2792 1 to 577       577/581
(99 %)
8 diff
(98.7 %id)
AA504442 germinal center B cell R3HDM1.d 2257 to 2760 1 to 501     Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 501/504
(99 %)
4 diff
(99.3 %id)
DN917364   R3HDM1.d 2279 to 2549 1 to 270       270/270
(100 %)
3 diff
(98.9 %id)
DA143115 alzheimer cortex R3HDM1.d 2293 to 2870 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA683470   R3HDM1.d 2331 to 2826 2 to 497   capped   496/496
(100 %)
0 diff
(100 %id)
CD557193 testis R3HDM1.d 2345 to 3147 6 to 819       810/970
(83 %)
5 diff
(99.5 %id)
DA598090   R3HDM1.d 2363 to 2909 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
BP201301 amygdala R3HDM1.d 2368 to 2943 7 to 582       576/582
(98 %)
6 diff
(99.0 %id)
TI_44185648   R3HDM1.d 2374 to 3126 32 to 804       773/1115
(69 %)
45 diff
(96.0 %id)
BI522745 brain R3HDM1.d 2375 to 3126 1 to 772       772/1083
(71 %)
39 diff
(96.4 %id)
DA844597 placenta R3HDM1.d 2380 to 2933 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA536009 heart R3HDM1.d 2384 to 2976 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
BG254076 adenocarcinoma, cell line, Prostate R3HDM1.d 2389 to 3141 1 to 767       767/965
(79 %)
42 diff
(95.7 %id)
AA356617   R3HDM1.d 2410 to 2661 1 to 252       252/252
(100 %)
1 diff
(99.7 %id)
AW403204 lymph R3HDM1.d 2422 to 2864 8 to 450       443/450
(98 %)
6 diff
(98.7 %id)
TI_154139797   R3HDM1.d 2422 to 3041 82 to 701       620/620
(100 %)
8 diff
(98.8 %id)
BM759803 stomach R3HDM1.d 2432 to 3028 1 to 597       597/597
(100 %)
2 diff
(99.7 %id)
BM757768 stomach R3HDM1.d 2432 to 3103 1 to 672       672/672
(100 %)
2 diff
(99.8 %id)
DA060070 cerebellum R3HDM1.d 2434 to 3008 2 to 576   capped   575/575
(100 %)
3 diff
(99.5 %id)
DB049204 testis R3HDM1.d 2530 to 3090 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA134864 alzheimer cortex R3HDM1.d 2583 to 3145 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
BE544408 cervical carcinoma cell line, cervix R3HDM1.d 2598 to 3084 1 to 492       492/617
(79 %)
13 diff
(97.9 %id)
BE548952 cervical carcinoma cell line, cervix R3HDM1.d 2599 to 3302 1 to 706       706/706
(100 %)
16 diff
(97.8 %id)
CR746394 duodenal adenocarcinoma, cell line, small intestine R3HDM1.d 2624 to 3116 5 to 497       493/497
(99 %)
6 diff
(98.8 %id)
BX477821   R3HDM1.d 2629 to 3174 1 to 546       546/546
(100 %)
0 diff
(100 %id)
BM550883 duodenal adenocarcinoma, cell line, small intestine R3HDM1.d 2636 to 3413 5 to 789       785/1159
(67 %)
9 diff
(99.3 %id)
AA214740   R3HDM1.d 2654 to 3006 1 to 351       351/351
(100 %)
2 diff
(99.5 %id)
DA363795 subthalamic nucleus R3HDM1.d 2659 to 3224 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
CF243122 Brain glioblastoma R3HDM1.d 2659 to 3503 1 to 846       846/846
(100 %)
2 diff
(99.8 %id)
BY994850   R3HDM1.d 2758 to 2915 1 to 158       158/158
(100 %)
7 diff
(95.6 %id)
CF146910 CNCAP(3)T-225 cell line, Prostate R3HDM1.d 2902 to 3594 8 to 701       690/701
(98 %)
6 diff
(99.2 %id)
CF146937 CNCAP(3)T-225 cell line, Prostate R3HDM1.d 2902 to 3535 8 to 642       631/642
(98 %)
8 diff
(98.8 %id)
CF147142 CNCAP(3)T-225 cell line, Prostate R3HDM1.d 2902 to 3593 8 to 698       687/698
(98 %)
6 diff
(99.2 %id)
TI_154179450   R3HDM1.d 2902 to 3720 74 to 885       812/814
(99 %)
14 diff
(98.3 %id)
TI_154179478   R3HDM1.d 2902 to 3738 75 to 908       834/836
(99 %)
8 diff
(99.1 %id)
TI_154179719   R3HDM1.d 2902 to 3744 68 to 909       842/842
(100 %)
19 diff
(97.8 %id)
AA504206 germinal center B cell R3HDM1.d 3916 to 4289 386 to 13   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 374/374
(100 %)
0 diff
(100 %id)
CN307026 embryonic stem cells, cell lines H1, H7, andH9 R3HDM1.e 1 to 582 1 to 582   tiling clone,   582/582
(100 %)
0 diff
(100 %id)
BX472160   R3HDM1.e 477 to 940 1 to 464   tiling clone,   464/464
(100 %)
0 diff
(100 %id)
BU165311 eye, retinoblastoma R3HDM1.e 618 to 1525 1 to 910   tiling clone,   910/910
(100 %)
14 diff
(98.5 %id)
DC315315 amygdala R3HDM1.e 1492 to 2047 1 to 557   tiling clone,   557/557
(100 %)
2 diff
(99.7 %id)
BP349559 brain R3HDM1.f 1 to 582 1 to 582   tiling clone,   582/582
(100 %)
3 diff
(99.5 %id)
BP349568 brain R3HDM1.f 1 to 581 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
BP228760 brain R3HDM1.f 578 to 1162 1 to 585   tiling clone,   585/585
(100 %)
2 diff
(99.7 %id)
DC324721 brain R3HDM1.g 1 to 598 1 to 599   tiling clone,   599/599
(100 %)
1 diff
(99.9 %id)
BF981456 duodenal adenocarcinoma, cell line, small intestine R3HDM1.g 561 to 1360 1 to 802   tiling clone,   802/966
(83 %)
32 diff
(96.7 %id)
BG249826 hypernephroma, cell line, Kidney R3HDM1.h 1 to 772 1 to 764 H173P G174R H175T I176H P177S ... tiling clone,   764/900
(84 %)
25 diff
(97.3 %id)
CN307029 embryonic stem cells, cell lines H1, H7, andH9 R3HDM1.i 1 to 587 3 to 589   tiling clone,   587/589
(99 %)
0 diff
(100 %id)
BG955615 colon R3HDM1.i 40 to 486 463 to 17       447/463
(96 %)
3 diff
(99.4 %id)
BP335466 coronary artery R3HDM1.i 63 to 644 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
BP336184 coronary artery R3HDM1.i 63 to 663 1 to 603   tiling clone,   603/603
(100 %)
5 diff
(99.2 %id)
AU123526   R3HDM1.j 1 to 737 2 to 739 Q166R P167H L168C Q169S Y170T ... tiling clone, capped   738/742
(99 %)
6 diff
(99.2 %id)
DC393013 breast, tumor tissue R3HDM1.k 1 to 543 1 to 543 exact tiling clone,   543/543
(100 %)
0 diff
(100 %id)
BP250021 hippocampus R3HDM1.l 1 to 587 1 to 587 Q169P tiling clone,   587/587
(100 %)
2 diff
(99.7 %id)
AU100558   R3HDM1.m 1 to 297 3 to 300   tiling clone,   300/300
(100 %)
3 diff
(99.0 %id)
AU107542   R3HDM1.m 1 to 47 3 to 50       50/50
(100 %)
2 diff
(96.0 %id)
BX646665   R3HDM1.m 4 to 175 1 to 172   tiling clone,   172/208
(82 %)
6 diff
(97.2 %id)
BE883367 leiomyosarcoma, uterus R3HDM1.m 61 to 672 1 to 638 L22S V23S N24K T25Y L26I ... tiling clone,   583/792
(73 %)
26 diff
(96.8 %id)
DB511782 testis R3HDM1.n-u 1 to 244 248 to 1   tiling clone,   248/248
(100 %)
4 diff
(98.4 %id)
BF357069 head_neck R3HDM1.n-u 143 to 440 19 to 316   tiling clone,   298/316
(94 %)
6 diff
(98.2 %id)
BF357049 head_neck R3HDM1.n-u 163 to 446 1 to 284   tiling clone,   284/284
(100 %)
9 diff
(96.9 %id)
BI458449 brain, hypothalamus R3HDM1.o 1 to 842 6 to 843 P66Q tiling clone,   838/843
(99 %)
23 diff
(97.3 %id)
BI458236 brain, hypothalamus R3HDM1.o 1 to 713 6 to 721 P66Q tiling clone,   716/721
(99 %)
18 diff
(97.6 %id)
BI667592 brain, hypothalamus R3HDM1.o 1 to 616 6 to 625 P66Q V109C H111T H112P N113Q ... tiling clone,   620/625
(99 %)
11 diff
(98.3 %id)
BI668477 brain, hypothalamus R3HDM1.o 1 to 695 6 to 697 P66Q tiling clone,   692/697
(99 %)
16 diff
(97.8 %id)
BI670316 brain, hypothalamus R3HDM1.o 1 to 716 6 to 720 P66Q     715/720
(99 %)
9 diff
(98.8 %id)
BI668237 brain, hypothalamus R3HDM1.o 1 to 624 6 to 629 P66Q     624/630
(99 %)
9 diff
(98.6 %id)
TI_44343551   R3HDM1.o 1 to 616 97 to 716 P66Q V109C H111T H112P N113Q ...     620/716
(86 %)
11 diff
(98.5 %id)
TI_44344648   R3HDM1.o 1 to 695 83 to 774 P66Q     692/774
(89 %)
16 diff
(98.0 %id)
TI_44345792   R3HDM1.o 1 to 716 93 to 807 P66Q     715/807
(88 %)
9 diff
(98.9 %id)
TI_44346379   R3HDM1.o 1 to 624 88 to 711 P66Q     624/712
(87 %)
9 diff
(98.8 %id)
DA300185 hippocampus R3HDM1.p 1 to 580 2 to 581   tiling clone, capped   580/580
(100 %)
0 diff
(100 %id)
AA301234 testis R3HDM1.p 410 to 639 1 to 230   tiling clone,   230/230
(100 %)
1 diff
(99.6 %id)
BP230885 brain R3HDM1.q 1 to 581 1 to 582 G30X N32E I33H S34L T36N ... tiling clone,   582/582
(100 %)
1 diff
(99.9 %id)
DA337187 hippocampus R3HDM1.r 1 to 600 2 to 601 exact tiling clone, capped   600/600
(100 %)
0 diff
(100 %id)
BC001217 Eye, retinoblastoma R3HDM1.s 1 to 2319 1 to 2319 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 2319/2319
(100 %)
8 diff
(99.7 %id)
BE251215 eye, retinoblastoma R3HDM1.s 20 to 637 1 to 616 exact available from MGC,   616/618
(99 %)
7 diff
(98.9 %id)
BI828466 brain, medulla R3HDM1.s 23 to 774 1 to 753 exact     753/753
(100 %)
2 diff
(99.8 %id)
TI_57175071   R3HDM1.s 23 to 774 33 to 785 exact     753/785
(95 %)
8 diff
(99.0 %id)
CK820227 Islets of Langerhans, Pancreas R3HDM1.s 40 to 644 1 to 605 exact     605/605
(100 %)
0 diff
(100 %id)
BM263173 Islets of Langerhans, Pancreas R3HDM1.s 56 to 633 1 to 578 exact     578/578
(100 %)
0 diff
(100 %id)
CK820226 Islets of Langerhans, Pancreas R3HDM1.s 202 to 788 597 to 11 exact AAA   587/587
(100 %)
0 diff
(100 %id)
BM142469 Islets of Langerhans, Pancreas R3HDM1.s 344 to 788 455 to 11   AAA   445/445
(100 %)
0 diff
(100 %id)
DB569906 hypothalamus R3HDM1.s 1794 to 2319 1 to 526   tiling clone, Submitted on the opposite strand 526/526
(100 %)
7 diff
(98.7 %id)
DB576715 hypothalamus R3HDM1.s 1834 to 2319 1 to 486     Submitted on the opposite strand 486/486
(100 %)
6 diff
(98.8 %id)
DB562506 hypothalamus R3HDM1.s 1904 to 2319 1 to 416     Submitted on the opposite strand 416/416
(100 %)
8 diff
(98.1 %id)
AL704414 human skeletal muscle R3HDM1.t 168 to 527 181 to 540   tiling clone,   540/540
(100 %)
1 diff
(99.9 %id)
ES308968 occipital hair of pubic hypotrichosispatient, skin R3HDM1.t 392 to 953 1 to 563       563/563
(100 %)
1 diff
(99.9 %id)
AI074503 brain, glioblastoma (pooled) R3HDM1.t 516 to 982 472 to 6 exact tiling clone,   467/472
(98 %)
0 diff
(100 %id)
CR983195 T-Lymphocytes R3HDM1.u-u 1 to 907 1 to 906 exact tiling clone,   906/906
(100 %)
1 diff
(99.9 %id)
DB129953 thymus R3HDM1.va-u 1 to 564 2 to 566   tiling clone, capped   565/565
(100 %)
1 diff
(99.9 %id)
DA519062 brain R3HDM1.va-u 244 to 802 2 to 560 exact tiling clone, capped   559/559
(100 %)
0 diff
(100 %id)
DB051016 testis R3HDM1.vb 1 to 581 2 to 582 exact tiling clone, capped   581/581
(100 %)
0 diff
(100 %id)
DA528878 brain R3HDM1.vc-u 1 to 559 2 to 561 exact tiling clone, capped   560/560
(100 %)
1 diff
(99.9 %id)
DA327186 hippocampus R3HDM1.vc-u 17 to 579 2 to 564 exact tiling clone, capped   563/563
(100 %)
0 diff
(100 %id)
DB173829 kidney, tumor tissue R3HDM1.vd 1 to 576 2 to 579 H5R S17G N18D I26V R28G tiling clone, capped   578/578
(100 %)
18 diff
(96.9 %id)
DB317592 brain R3HDM1.ve-u 1 to 545 543 to 1 Q10X tiling clone,   543/543
(100 %)
5 diff
(99.1 %id)
CV569147 cornea, eye R3HDM1.vf-u 1 to 530 1 to 530 exact tiling clone,   530/530
(100 %)
0 diff
(100 %id)
BF367134 placenta_normal R3HDM1.vf-u 231 to 528 1 to 298       298/298
(100 %)
7 diff
(97.7 %id)
AW086199 ovary, papillary serous carcinoma R3HDM1.vg 1 to 466 479 to 14 exact tiling clone, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 466/466
(100 %)
0 diff
(100 %id)
T10456   Gene R3HDM1, variant not shown         Submitted on the opposite strand    
H64110 liver and spleen Gene R3HDM1, variant not shown              
H64158 liver and spleen Gene R3HDM1, variant not shown              
CA773854 Pancreas, Purified pancreatic islet Gene R3HDM1, variant not shown              
BU069132 Pancreas, Purified pancreatic islet Gene R3HDM1, variant not shown              
BQ226232 embryonal carcinoma, cell line, testis Gene R3HDM1, variant not shown              
BU567586 testis Gene R3HDM1, variant not shown              
BU853068 testis Gene R3HDM1, variant not shown              
DA806596 brain Gene R3HDM1, variant not shown       capped      
DB238399 trachea Gene R3HDM1, variant not shown       capped      
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n-u, .o, .p, .q, .r, .s, .t, .u-u, .va-u, .vb, .vc-u, .vd, .ve-u, .vf-u, .vg Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI