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Gene QKITABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
557 supporting clones for gene QKI back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AB067798 brain .a 1 to 4663 1 to 4664 A63S A65R P67S S68L S69L ... tiling clone,   4664/4664
(100 %)
5 diff
(99.9 %id)
NM_006775.2   .a 1 to 9462 1 to 9462 exact RefSeq, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 9462/9462
(100 %)
0 diff
(100 %id)
AF272349   .a 119 to 2586 1 to 2470 A420G D421R R422P A423S A424R ... tiling clone, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 2470/2470
(100 %)
2 diff
(100.0 %id)
BC019917 Skin, melanotic melanoma. .a 524 to 2586 12 to 2074   available from MGC, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 2063/2063
(100 %)
0 diff
(100 %id)
AF142419   .a 533 to 1577 93 to 1137       1045/1137
(91 %)
6 diff
(99.5 %id)
AF142421   .a 546 to 1577 285 to 1316       1032/1316
(78 %)
6 diff
(99.6 %id)
TI_1948122057   .a 552 to 1560 131 to 1134   fully sequenced,   1004/1134
(88 %)
33 diff
(97.1 %id)
TI_1948122226   .a 552 to 1156 141 to 745   fully sequenced,   605/704
(85 %)
6 diff
(99.2 %id)
TI_1948122407   .a 552 to 1128 131 to 707   fully sequenced,   577/707
(81 %)
6 diff
(99.2 %id)
TI_1948122577   .a 552 to 1128 139 to 715   fully sequenced,   577/715
(80 %)
6 diff
(99.2 %id)
AK027309 whole embryo, mainly head .a 594 to 2586 1 to 1993   available from FLJ,   1993/1993
(100 %)
0 diff
(100 %id)
BU507882 leiomyosarcoma, uterus .a 626 to 1552 1 to 933       933/1108
(84 %)
17 diff
(98.5 %id)
BC012222 Placenta, choriocarcinoma .a 694 to 2586 1 to 1894   available from MGC, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 1894/1894
(100 %)
2 diff
(99.9 %id)
BI861078 breast, mammary adenocarcinoma, cell line .a 716 to 1556 1 to 841       841/852
(98 %)
10 diff
(98.9 %id)
TI_57192836   .a 716 to 1556 52 to 892       841/852
(98 %)
10 diff
(98.9 %id)
CD640090 pooled .a 849 to 1538 1 to 688       688/731
(94 %)
5 diff
(99.4 %id)
TI_1948122058   .a 923 to 1560 777 to 140   fully sequenced,   638/777
(82 %)
0 diff
(100 %id)
TI_151809292   .a 952 to 1725 100 to 874       775/1081
(71 %)
15 diff
(98.7 %id)
TI_151729907   .a 954 to 1754 885 to 87       799/1037
(77 %)
4 diff
(99.7 %id)
AW361210 colon .a 1005 to 1547 548 to 3       546/548
(99 %)
5 diff
(99.1 %id)
CR611372 placenta .a 1026 to 2544 1 to 1519       1519/1519
(100 %)
0 diff
(100 %id)
BX404888 placenta .a 1027 to 1785 1 to 759   fully sequenced,   759/759
(100 %)
3 diff
(99.7 %id)
BG325870 Kidney, renal cell adenocarcinoma .a 1041 to 1760 1 to 719       719/990
(72 %)
20 diff
(98.0 %id)
AV696811 hepatocellular carcinoma .a 1042 to 1715 1 to 670       670/671
(99 %)
7 diff
(99.0 %id)
AV684991 hepatocellular carcinoma .a 1042 to 1699 1 to 657       657/677
(97 %)
13 diff
(98.1 %id)
TI_1948122408   .a 1067 to 1560 632 to 139   fully sequenced,   494/632
(78 %)
0 diff
(100 %id)
TI_1948122578   .a 1067 to 1560 633 to 140   fully sequenced,   494/633
(78 %)
0 diff
(100 %id)
CA436344 Bone, Subchondral Bone .a 1101 to 1727 645 to 19   AAA   627/632
(99 %)
1 diff
(99.9 %id)
TI_1948122227   .a 1126 to 1560 594 to 159   fully sequenced, AAA   436/579
(75 %)
2 diff
(99.7 %id)
DA760236   .a 1303 to 1841 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
AL050218 uterus .a 1308 to 2591 1 to 1282   available from DKFZ,   1282/1282
(100 %)
2 diff
(99.9 %id)
BQ778611 Pancreas, Purified pancreatic islet .a 1393 to 1959 1 to 567       567/567
(100 %)
0 diff
(100 %id)
BQ778556 Pancreas, Purified pancreatic islet .a 1393 to 1673 1 to 281       281/281
(100 %)
0 diff
(100 %id)
CN273820 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1421 to 1771 1 to 351       351/351
(100 %)
0 diff
(100 %id)
N39361 melanocyte .a 1448 to 1924 1 to 480       480/480
(100 %)
5 diff
(99.0 %id)
TI_154032806   .a 1454 to 2386 27 to 953     Submitted on the opposite strand 927/1030
(90 %)
24 diff
(97.7 %id)
TI_154037892   .a 1454 to 2384 47 to 959     Submitted on the opposite strand 913/1059
(86 %)
26 diff
(97.6 %id)
N90973 liver and spleen .a 1474 to 1687 1 to 214       214/214
(100 %)
7 diff
(96.8 %id)
AA002101 liver and spleen .a 1479 to 1835 7 to 364       358/364
(98 %)
9 diff
(97.6 %id)
BX404887 placenta .a 1755 to 2544 795 to 1   fully sequenced,   795/795
(100 %)
12 diff
(98.5 %id)
BQ778392 Pancreas, Purified pancreatic islet .a 1987 to 2586 600 to 1       600/600
(100 %)
0 diff
(100 %id)
BQ778335 Pancreas, Purified pancreatic islet .a 2009 to 2585 578 to 1       578/578
(100 %)
1 diff
(99.9 %id)
N69481 liver and spleen .a 2147 to 2587 444 to 1       444/444
(100 %)
4 diff
(99.1 %id)
AA002102 liver and spleen .a 2152 to 2586 437 to 1       437/437
(100 %)
3 diff
(99.4 %id)
N23762 melanocyte .a 2169 to 2586 419 to 1       419/419
(100 %)
2 diff
(99.6 %id)
AB067800 brain .b 1 to 6964 1 to 6965 A63S A65R P67S S68L S69L ... tiling clone,   6965/6965
(100 %)
5 diff
(100.0 %id)
NM_206854.2   .b 1 to 15414 1 to 15414 exact RefSeq, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 15414/15414
(100 %)
0 diff
(100 %id)
CR626096 Placenta Cot 25-normalized .b 137 to 2022 1 to 1886 exact tiling clone,   1886/1886
(100 %)
0 diff
(100 %id)
AF142418   .b 533 to 1529 93 to 1089       997/1089
(91 %)
6 diff
(99.5 %id)
AF142417   .b 546 to 1529 285 to 1268       984/1268
(77 %)
6 diff
(99.6 %id)
AK295235 caudate nucleus .b 990 to 2230 1 to 1241       1241/1241
(100 %)
0 diff
(100 %id)
DC326265 caudate nucleus .b 990 to 1552 1 to 563       563/563
(100 %)
0 diff
(100 %id)
BF343900 brain, glioblastoma with EGFR amplification .b 1025 to 1796 1 to 763       763/910
(83 %)
19 diff
(98.0 %id)
BX351579 Placenta Cot 25-normalized .b 1226 to 2010 812 to 17       796/853
(93 %)
27 diff
(96.9 %id)
DA297653 hippocampus .b 1430 to 2003 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
AB067799 brain .c 1 to 5685 1 to 5686 A63S A65R P67S S68L S69L ... tiling clone,   5686/5686
(100 %)
6 diff
(99.9 %id)
NM_206853.2   .c 1 to 14135 1 to 14135 exact RefSeq, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 14135/14135
(100 %)
0 diff
(100 %id)
AF142422   .c 533 to 1511 93 to 1071   tiling clone,   979/1071
(91 %)
6 diff
(99.5 %id)
AF142420   .c 546 to 1511 285 to 1250       966/1250
(77 %)
6 diff
(99.6 %id)
DA320116 hippocampus .c 993 to 1543 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
AK308784 amygdala .c 1053 to 2103 1 to 1051       1051/1051
(100 %)
1 diff
(100.0 %id)
DA195033 amygdala .c 1053 to 1589 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA245001 brain .c 1163 to 1735 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA222765 brain .c 1269 to 1804 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DQ323998   .d 1 to 1002 1 to 1002 S30G tiling clone,   1002/1002
(100 %)
1 diff
(100.0 %id)
CN350545 embryonic stem cells, cell lines H1, H7, andH9 .d 210 to 790 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DA241947 brain .d 284 to 860 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DB492884 hypothalamus .d 429 to 889 1 to 461       461/461
(100 %)
4 diff
(99.2 %id)
T78719 liver and spleen .d 472 to 806 1 to 339       339/339
(100 %)
8 diff
(97.7 %id)
AB067801 brain .e 1 to 7911 1 to 7912   tiling clone,   7912/7912
(100 %)
5 diff
(100.0 %id)
NM_206855.2   .e 1 to 16361 1 to 16361   RefSeq, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 16361/16361
(100 %)
0 diff
(100 %id)
CB989822 Human Placenta, placenta .e 70 to 693 26 to 649       624/799
(78 %)
1 diff
(99.9 %id)
CR997905 T-Lymphocytes .e 134 to 839 1 to 703       703/723
(97 %)
1 diff
(99.9 %id)
BX357241 Placenta Cot 25-normalized .e 137 to 954 1 to 820       820/956
(85 %)
7 diff
(99.3 %id)
CR980270 T-Lymphocytes .e 137 to 444 1 to 308       308/313
(98 %)
1 diff
(99.7 %id)
DB502858 hypothalamus .e 157 to 643 1 to 487       487/487
(100 %)
3 diff
(99.4 %id)
CD109893 Human Placenta, placenta .e 421 to 1152 28 to 758   tiling clone,   731/758
(96 %)
8 diff
(99.0 %id)
CN350541 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 494 to 1183 1 to 690       690/690
(100 %)
1 diff
(99.9 %id)
CN350536 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 495 to 1074 1 to 580       580/580
(100 %)
5 diff
(99.2 %id)
DA548967   .e 495 to 1056 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
BE893920 melanotic melanoma, skin .e 522 to 1167 1 to 642       642/938
(68 %)
7 diff
(99.3 %id)
BI035547 nervous_normal .e 547 to 1015 469 to 1       469/469
(100 %)
3 diff
(99.4 %id)
CV029398 mixed .e 552 to 1198 1 to 647       647/647
(100 %)
0 diff
(100 %id)
BF963322 nervous_normal .e 558 to 951 478 to 82       395/488
(80 %)
0 diff
(100 %id)
AI174954 Liver .e 571 to 1243 1 to 673       673/677
(99 %)
1 diff
(99.9 %id)
AA489445   .e 579 to 1023 1 to 444       444/445
(99 %)
2 diff
(99.6 %id)
DA569941 whole embryo, mainly head .e 595 to 1339 2 to 749   capped   748/752
(99 %)
5 diff
(99.4 %id)
DA222522 brain .e 604 to 1219 2 to 617   capped   616/616
(100 %)
0 diff
(100 %id)
CN350546 embryonic stem cells, DMSO-treated H9 cellline .e 610 to 1316 18 to 724       707/724
(97 %)
6 diff
(99.2 %id)
BQ339974 nervous_normal .e 621 to 913 358 to 64       295/358
(82 %)
0 diff
(100 %id)
BF960107 nervous_normal .e 655 to 1025 372 to 3       370/372
(99 %)
3 diff
(99.2 %id)
FN170678 breast carcinoma .e 677 to 755 1 to 78       78/78
(100 %)
2 diff
(97.5 %id)
BQ340237 nervous_normal .e 692 to 1015 324 to 1       324/343
(94 %)
4 diff
(98.9 %id)
BE541854 cervix .e 714 to 1426 1 to 709   available from MGC,   709/709
(100 %)
25 diff
(96.5 %id)
DB065815 testis .e 725 to 1300 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
CN350537 embryonic stem cells, DMSO-treated H9 cellline .e 733 to 1229 1 to 497       497/497
(100 %)
0 diff
(100 %id)
BJ993823 hepatoblastoma .e 771 to 1231 1 to 461       461/461
(100 %)
0 diff
(100 %id)
DA101782 cerebellum .e 844 to 1380 2 to 538   tiling clone, capped   537/537
(100 %)
0 diff
(100 %id)
BF960669 nervous_normal .e 875 to 1015 140 to 1       140/140
(100 %)
1 diff
(99.3 %id)
H16837 whole brain .e 927 to 1385 1 to 467       467/467
(100 %)
21 diff
(95.6 %id)
BF849646 lung_normal .e 983 to 1196 343 to 130     Submitted on the opposite strand 214/343
(62 %)
0 diff
(100 %id)
BI018243 marrow .e 986 to 1377 394 to 3       392/394
(99 %)
1 diff
(99.8 %id)
AW902241 nervous_normal .e 993 to 1422 434 to 1       434/434
(100 %)
5 diff
(98.9 %id)
CB121840 Liver .e 1052 to 1323 1 to 272       272/272
(100 %)
0 diff
(100 %id)
CN350538 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 1060 to 1264 1 to 205       205/205
(100 %)
0 diff
(100 %id)
TI_57192763   .e 1098 to 1473 493 to 877       385/821
(46 %)
17 diff
(98.0 %id)
AW896548 nervous_normal .e 1202 to 1520 328 to 8       321/370
(86 %)
0 diff
(100 %id)
AL707101 human skeletal muscle .e 1519 to 2062 1 to 553       553/553
(100 %)
9 diff
(98.4 %id)
DA219435 brain .e 1757 to 2288 2 to 534   capped   533/533
(100 %)
1 diff
(99.9 %id)
AV650869 corresponding non cancerous liver tissue .e 2291 to 2953 1 to 663     Submitted on the opposite strand 663/663
(100 %)
1 diff
(99.9 %id)
AW297133   .e 2550 to 2972 440 to 18   AAA   423/443
(95 %)
0 diff
(100 %id)
AI912802 carcinoid, lung .e 2584 to 2974 391 to 1       391/391
(100 %)
0 diff
(100 %id)
DA015970 adrenal gland .e 2616 to 3188 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA220673 brain .e 2639 to 3176 2 to 539   capped   538/539
(99 %)
2 diff
(99.7 %id)
DA320776 hippocampus .e 2652 to 3211 2 to 565   capped   564/564
(100 %)
4 diff
(99.3 %id)
DA167713 amygdala .e 2653 to 3227 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA233293 brain .e 2739 to 3276 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DA224651 brain .e 2749 to 3312 2 to 566   capped   565/566
(99 %)
3 diff
(99.5 %id)
BF946508 nervous_normal .e 2792 to 3210 1 to 418       418/418
(100 %)
4 diff
(99.1 %id)
DA151996 amygdala .e 2838 to 3416 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
T96437 liver and spleen .e 2857 to 3193 13 to 358       346/366
(94 %)
10 diff
(97.3 %id)
DA272942 caudate nucleus .e 2880 to 3424 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
H16730 whole brain .e 2888 to 3287 420 to 17   AAA   404/411
(98 %)
7 diff
(98.3 %id)
DA414216 thalamus .e 2923 to 3489 2 to 569   capped   568/568
(100 %)
3 diff
(99.5 %id)
TI_154007939   .e 2977 to 3568 79 to 668     Submitted on the opposite strand 590/1029
(57 %)
38 diff
(96.4 %id)
CA435122 lung, Lung Focal Fibrosis .e 2985 to 3409 1 to 425     Submitted on the opposite strand 425/425
(100 %)
14 diff
(96.8 %id)
DA408655 thalamus .e 3006 to 3559 2 to 559   capped   558/558
(100 %)
6 diff
(99.0 %id)
DA245690 brain .e 3033 to 3634 2 to 604   capped   603/603
(100 %)
1 diff
(99.9 %id)
DA318798 hippocampus .e 3077 to 3632 2 to 560   capped   559/559
(100 %)
4 diff
(99.3 %id)
BF960586 nervous_normal .e 3168 to 3411 247 to 4       244/247
(98 %)
0 diff
(100 %id)
DA327891 hippocampus .e 3196 to 3759 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DA216081 brain .e 3271 to 3751 2 to 482   capped   481/481
(100 %)
1 diff
(99.8 %id)
DA222482 brain .e 3335 to 3976 2 to 643   capped   642/642
(100 %)
1 diff
(99.9 %id)
DA536888 heart .e 3336 to 3923 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DA321799 hippocampus .e 3404 to 3966 2 to 568   capped   567/568
(99 %)
7 diff
(98.8 %id)
DA249998 brain .e 3519 to 4106 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DA239678 brain .e 3582 to 4155 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
DA243193 brain .e 3585 to 4106 2 to 523   capped   522/522
(100 %)
3 diff
(99.5 %id)
DA235968 brain .e 3586 to 4152 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
CB992311 placenta, pre-eclamptic placenta .e 3827 to 4605 26 to 809       784/822
(95 %)
6 diff
(99.3 %id)
DB295419 adrenal gland .e 3855 to 4404 550 to 1       550/550
(100 %)
2 diff
(99.7 %id)
DB542550 hippocampus .e 3942 to 4404 1 to 463     Submitted on the opposite strand 463/463
(100 %)
0 diff
(100 %id)
DA287214 corpus callosum .e 3970 to 4523 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
DB469477 hippocampus .e 4080 to 4516 1 to 437       437/437
(100 %)
1 diff
(99.8 %id)
DB470223 hippocampus .e 4080 to 4534 1 to 456       456/456
(100 %)
1 diff
(99.8 %id)
DA124036 cerebellum .e 4118 to 4680 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA227541 brain .e 4125 to 4781 2 to 657   capped   656/656
(100 %)
1 diff
(99.9 %id)
BX499838 Liver .e 4219 to 4795 1 to 577       577/577
(100 %)
0 diff
(100 %id)
AL700371 human skeletal muscle .e 4226 to 4713 1 to 488       488/488
(100 %)
0 diff
(100 %id)
BQ881226 dorsal root ganglia .e 4250 to 5192 7 to 953       947/955
(99 %)
26 diff
(97.3 %id)
DA405269 thalamus .e 4258 to 4821 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA223918 brain .e 4298 to 4794 2 to 498   capped   497/497
(100 %)
0 diff
(100 %id)
DA411895 thalamus .e 4304 to 4866 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA113984 cerebellum .e 4310 to 4871 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA185833 amygdala .e 4316 to 4838 2 to 524   capped   523/523
(100 %)
0 diff
(100 %id)
DA303043 hippocampus .e 4317 to 4892 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA318578 hippocampus .e 4317 to 4890 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA321429 hippocampus .e 4317 to 4837 2 to 522   capped   521/521
(100 %)
0 diff
(100 %id)
DA325911 hippocampus .e 4317 to 4884 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA406697 thalamus .e 4317 to 4875 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA101245 cerebellum .e 4318 to 4891 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA234125 brain .e 4318 to 4897 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA188210 amygdala .e 4319 to 4845 2 to 528   capped   527/527
(100 %)
0 diff
(100 %id)
DA228212 brain .e 4319 to 4877 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA238823 brain .e 4319 to 4910 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DA180908 amygdala .e 4320 to 4896 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DB176919 kidney, tumor tissue .e 4320 to 4864 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA224721 brain .e 4321 to 4979 2 to 661   capped   660/660
(100 %)
2 diff
(99.7 %id)
DA236508 brain .e 4322 to 4913 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DA231251 brain .e 4323 to 4859 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA244392 brain .e 4324 to 4921 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
DA406874 thalamus .e 4324 to 4667 2 to 345   capped   344/344
(100 %)
0 diff
(100 %id)
DA217662 brain .e 4368 to 4906 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DA416646 thalamus .e 4401 to 4959 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
BF342385 brain, glioblastoma with EGFR amplification .e 4418 to 5190 1 to 764       764/798
(95 %)
17 diff
(97.9 %id)
DB464298 hippocampus .e 4423 to 4885 1 to 463       463/463
(100 %)
2 diff
(99.6 %id)
DA415455 thalamus .e 4427 to 4718 2 to 293   capped   292/292
(100 %)
0 diff
(100 %id)
DA219149 brain .e 4482 to 5051 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA806836 brain .e 4496 to 5061 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DB467697 hippocampus .e 4543 to 4959 1 to 420       420/420
(100 %)
5 diff
(98.9 %id)
DB481364 hippocampus .e 4543 to 4972 1 to 430       430/430
(100 %)
1 diff
(99.8 %id)
BX952220   .e 4548 to 5103 1 to 556       556/556
(100 %)
0 diff
(100 %id)
DA387296 thalamus .e 4568 to 5135 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA122116 cerebellum .e 4569 to 5122 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA397479 thalamus .e 4587 to 5160 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA185725 amygdala .e 4603 to 5151 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
BQ437758 melanotic melanoma, skin .e 4647 to 5432 1 to 793       793/859
(92 %)
16 diff
(98.2 %id)
CN350542 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 4730 to 5408 1 to 678       678/678
(100 %)
1 diff
(99.9 %id)
DB159216 thymus .e 4763 to 5334 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA350647 substantia nigra .e 4786 to 5359 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
AJ420502   .e 4813 to 7903 12 to 3103   AAA   3092/3103
(99 %)
6 diff
(99.9 %id)
DA368482 subthalamic nucleus .e 4825 to 5411 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DR761619 embryonic stem .e 4832 to 5696 1 to 865       865/865
(100 %)
2 diff
(99.8 %id)
DA393931 thalamus .e 4843 to 5434 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
BE896202 melanotic melanoma, skin .e 4851 to 5544 1 to 684       684/912
(75 %)
16 diff
(98.3 %id)
EB386908 eye, optic nerve .e 4882 to 5696 1 to 815       815/815
(100 %)
1 diff
(99.9 %id)
DA309202 hippocampus .e 4887 to 5468 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
BI596910 brain, hypothalamus .e 4910 to 5702 1 to 796       796/798
(99 %)
25 diff
(96.9 %id)
TI_45208816   .e 4913 to 5702 88 to 880       793/882
(89 %)
24 diff
(97.3 %id)
BQ882097 dorsal root ganglia .e 4918 to 5850 7 to 943       937/945
(99 %)
19 diff
(98.0 %id)
BI602641 brain, hypothalamus .e 5002 to 5777 1 to 772       772/813
(94 %)
17 diff
(98.0 %id)
TI_45213566   .e 5006 to 5777 89 to 856       768/897
(85 %)
14 diff
(98.5 %id)
DB499600 hypothalamus .e 5007 to 5485 1 to 479       479/479
(100 %)
1 diff
(99.8 %id)
H82350 melanocyte .e 5032 to 5366 1 to 335       335/335
(100 %)
0 diff
(100 %id)
DA179195 amygdala .e 5146 to 5723 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA347204 substantia nigra .e 5181 to 5734 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB170617 kidney, tumor tissue .e 5214 to 5809 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
BG818935 anaplastic oligodendroglioma with 1p/19qloss, brain .e 5220 to 5895 1 to 675       675/675
(100 %)
1 diff
(99.9 %id)
DB180452 kidney, tumor tissue .e 5231 to 5800 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA549613   .e 5300 to 5870 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA350473 substantia nigra .e 5306 to 5880 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA362298 subthalamic nucleus .e 5310 to 5844 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
AL120142 amygdala .e 5331 to 5819 1 to 489       489/489
(100 %)
0 diff
(100 %id)
DA287954 corpus callosum .e 5345 to 5893 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA496763 brain .e 5356 to 5941 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DB166756 kidney, tumor tissue .e 5372 to 5930 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA352794 substantia nigra .e 5391 to 5956 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA136755 alzheimer cortex .e 5399 to 5965 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA131249 alzheimer cortex .e 5400 to 5858 2 to 460   capped   459/459
(100 %)
0 diff
(100 %id)
DA133235 alzheimer cortex .e 5405 to 5942 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DA301012 hippocampus .e 5443 to 6008 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA273851 corpus callosum .e 5458 to 6026 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
TI_45208954   .e 5466 to 6032 84 to 650       567/650
(87 %)
7 diff
(99.0 %id)
DA352658 substantia nigra .e 5502 to 6065 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA531133 brain .e 5549 to 6147 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
DA300254 hippocampus .e 5566 to 6140 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DB167802 kidney, tumor tissue .e 5596 to 6154 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA264415 caudate nucleus .e 5600 to 6140 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA282485 corpus callosum .e 5622 to 6203 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DB472070 hippocampus .e 5646 to 6140 1 to 495       495/495
(100 %)
0 diff
(100 %id)
EB388853 eye, optic nerve .e 5665 to 6478 1 to 816       816/816
(100 %)
4 diff
(99.6 %id)
BG715254 brain, hypothalamus .e 5719 to 6421 1 to 707       707/802
(88 %)
13 diff
(98.4 %id)
DA941263 Spleen .e 5779 to 6370 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DB173590 kidney, tumor tissue .e 5817 to 6398 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
BG715087 brain, hypothalamus .e 5830 to 6570 1 to 743       743/743
(100 %)
7 diff
(99.1 %id)
DB490145 hypothalamus .e 5837 to 6312 1 to 478       478/478
(100 %)
2 diff
(99.6 %id)
DB501975 hypothalamus .e 5837 to 6304 1 to 468       468/468
(100 %)
0 diff
(100 %id)
TI_151794620   .e 5865 to 6528 108 to 779       672/811
(82 %)
53 diff
(93.5 %id)
DB307498 corpus callosum .e 5879 to 6404 528 to 1       528/528
(100 %)
3 diff
(99.5 %id)
TI_45379811   .e 5896 to 6674 95 to 878       784/878
(89 %)
6 diff
(99.4 %id)
BF951389 nervous_normal .e 5897 to 6302 417 to 12       406/417
(97 %)
0 diff
(100 %id)
DA269888 caudate nucleus .e 5903 to 6473 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA287083 corpus callosum .e 5909 to 6488 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
AA398036   .e 5935 to 6340 1 to 411       411/415
(99 %)
9 diff
(97.9 %id)
CB121695 brain .e 5937 to 6505 1 to 569       569/569
(100 %)
0 diff
(100 %id)
AK055085 brain .e 5948 to 7908 1 to 1961   available from FLJ,   1961/1961
(100 %)
0 diff
(100 %id)
DA198065 brain .e 5949 to 6509 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA367696 subthalamic nucleus .e 5979 to 6540 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
F11381 brain, total brain .e 5988 to 6338 1 to 351       351/351
(100 %)
0 diff
(100 %id)
DA346729 substantia nigra .e 6005 to 6562 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA355947 subthalamic nucleus .e 6016 to 6571 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA358100 subthalamic nucleus .e 6016 to 6587 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA353839 substantia nigra .e 6023 to 6581 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA352380 substantia nigra .e 6036 to 6605 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BQ876400 sympathetic trunk .e 6063 to 6931 1 to 878       878/897
(97 %)
17 diff
(98.2 %id)
CX869931 embryonic stem .e 6066 to 6838 1 to 773       773/773
(100 %)
0 diff
(100 %id)
AW953620   .e 6079 to 6739 1 to 665       665/673
(98 %)
9 diff
(98.7 %id)
DA137268 alzheimer cortex .e 6121 to 6679 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA141860 alzheimer cortex .e 6158 to 6692 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
BF665855 brain, primitive neuroectoderm .e 6165 to 6689 1 to 525       525/525
(100 %)
0 diff
(100 %id)
DA366995 subthalamic nucleus .e 6191 to 6744 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
BG611112 adenocarcinoma, Prostate .e 6210 to 6960 1 to 759       759/869
(87 %)
16 diff
(98.2 %id)
BQ722545 sympathetic trunk .e 6228 to 7112 31 to 928       898/941
(95 %)
33 diff
(96.5 %id)
FN102196 breast carcinoma .e 6280 to 6349 1 to 70       70/70
(100 %)
3 diff
(95.8 %id)
BG492541 lung, mucoepidermoid carcinoma .e 6293 to 6956 1 to 671       671/931
(72 %)
17 diff
(98.2 %id)
DA132696 alzheimer cortex .e 6298 to 6847 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB498706 hypothalamus .e 6317 to 6811 1 to 496       496/496
(100 %)
2 diff
(99.6 %id)
Z42896 brain, total brain .e 6331 to 6667 1 to 338       338/338
(100 %)
1 diff
(99.8 %id)
DB492115 hypothalamus .e 6331 to 6766 1 to 434       434/434
(100 %)
4 diff
(99.1 %id)
DT215875 brain .e 6585 to 7234 1 to 650       650/650
(100 %)
0 diff
(100 %id)
BQ420486 embryonal carcinoma, cell line, testis .e 6619 to 7446 1 to 839       839/874
(95 %)
18 diff
(98.0 %id)
W79267 heart .e 6635 to 7074 1 to 440       440/440
(100 %)
2 diff
(99.6 %id)
CF453462 peripheral nervous system .e 6636 to 7336 31 to 730       700/731
(95 %)
2 diff
(99.8 %id)
BQ722765 sympathetic trunk .e 6737 to 7582 12 to 856       845/856
(98 %)
6 diff
(99.3 %id)
EB386311 eye, optic nerve .e 6747 to 7542 1 to 795       795/795
(100 %)
1 diff
(99.9 %id)
BG716724 brain, hypothalamus .e 6766 to 7465 1 to 699       699/700
(99 %)
7 diff
(99.0 %id)
DB485566 hypothalamus .e 6771 to 7182 1 to 412       412/412
(100 %)
2 diff
(99.6 %id)
CB155403 brain .e 6794 to 7392 1 to 599       599/599
(100 %)
0 diff
(100 %id)
DT217444 brain .e 6823 to 7563 1 to 741       741/741
(100 %)
0 diff
(100 %id)
AA099294 uterus .e 6834 to 7165 1 to 333       333/333
(100 %)
5 diff
(98.5 %id)
AV725609 hypothalamus .e 6849 to 7223 1 to 375       375/375
(100 %)
0 diff
(100 %id)
BG570028 lung .e 6867 to 7703 1 to 826       826/845
(97 %)
31 diff
(96.4 %id)
EB386756 eye, optic nerve .e 6871 to 7700 1 to 830       830/830
(100 %)
0 diff
(100 %id)
TI_44343072   .e 6887 to 7659 125 to 893       769/894
(86 %)
21 diff
(97.7 %id)
DT215324 brain .e 6902 to 7450 1 to 549       549/549
(100 %)
0 diff
(100 %id)
BQ434339 melanotic melanoma, skin .e 6944 to 7787 1 to 848       848/853
(99 %)
8 diff
(99.1 %id)
CK003006 brain/CNS, Human Brain - Cerebellar Cortex .e 6971 to 7638 1 to 663       663/666
(99 %)
7 diff
(99.0 %id)
BQ344027 nervous_tumor .e 6982 to 7157 180 to 6       175/180
(97 %)
0 diff
(100 %id)
BC008190 Brain, anaplastic oligodendroglioma with1p/19q loss .e 6994 to 7903 1 to 910   available from MGC, AAA   910/910
(100 %)
0 diff
(100 %id)
BF529277 anaplastic oligodendroglioma with 1p/19qloss, brain .e 6994 to 7686 1 to 717   available from MGC,   717/784
(91 %)
61 diff
(92.3 %id)
BF925576 nervous_tumor .e 7079 to 7479 408 to 10     Submitted on the opposite strand 399/434
(91 %)
0 diff
(100 %id)
BF926022 nervous_tumor .e 7079 to 7485 406 to 1     Submitted on the opposite strand 406/427
(95 %)
22 diff
(94.9 %id)
BF930553 nervous_tumor .e 7079 to 7486 408 to 1     Submitted on the opposite strand 408/436
(93 %)
11 diff
(97.5 %id)
BI549466 brain, hippocampus .e 7106 to 7216 809 to 925       894/952
(93 %)
33 diff
(96.6 %id)
TI_44169288   .e 7106 to 7216 928 to 1044       890/1071
(83 %)
21 diff
(98.1 %id)
TI_149287975   .e 7121 to 7903 861 to 81   AAA   781/1001
(78 %)
16 diff
(98.5 %id)
EB388825 eye, optic nerve .e 7126 to 7866 1 to 741       741/741
(100 %)
0 diff
(100 %id)
BF935694 nervous_tumor .e 7136 to 7485 637 to 287     Submitted on the opposite strand 351/637
(55 %)
0 diff
(100 %id)
AL119689 amygdala .e 7223 to 7719 1 to 497       497/497
(100 %)
0 diff
(100 %id)
TI_149294113   .e 7223 to 7908 773 to 89   AAA   685/694
(98 %)
4 diff
(99.5 %id)
BM985026 lung .e 7235 to 7908 686 to 14   AAA   673/673
(100 %)
1 diff
(99.9 %id)
BF806497 colon_ins .e 7238 to 7612 426 to 52     Submitted on the opposite strand 375/426
(88 %)
7 diff
(98.4 %id)
BQ005442 Chondrosarcoma, Left Pelvis .e 7244 to 7908 678 to 14   AAA   665/665
(100 %)
0 diff
(100 %id)
N76198 multiple sclerosis lesions .e 7256 to 7597 1 to 342   fully sequenced,   342/342
(100 %)
0 diff
(100 %id)
BM970146 lung .e 7264 to 7903 655 to 16   AAA   640/640
(100 %)
2 diff
(99.7 %id)
TI_149273752   .e 7267 to 7903 716 to 81   AAA   636/901
(70 %)
3 diff
(99.7 %id)
BM968192 lung, Primary Lung Epithelial Cells .e 7267 to 7903 651 to 16   AAA   636/636
(100 %)
3 diff
(99.6 %id)
BF925614 nervous_tumor .e 7324 to 7479 166 to 10     Submitted on the opposite strand 157/173
(90 %)
0 diff
(100 %id)
TI_151708508   .e 7337 to 7904 695 to 126       570/774
(73 %)
0 diff
(100 %id)
BE348332 carcinoid, lung .e 7341 to 7902 562 to 1       562/562
(100 %)
0 diff
(100 %id)
BF060766 pooled .e 7341 to 7903 563 to 1       563/563
(100 %)
0 diff
(100 %id)
BE674451 carcinoid, lung .e 7347 to 7908 583 to 22   AAA   562/562
(100 %)
0 diff
(100 %id)
BF439537 pooled .e 7353 to 7904 552 to 1       552/552
(100 %)
0 diff
(100 %id)
DB315667 brain .e 7356 to 7903 549 to 1       549/549
(100 %)
1 diff
(99.9 %id)
BM931336 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .e 7369 to 7903 1 to 534   fully sequenced, AAA   534/534
(100 %)
1 diff
(99.9 %id)
AI421952 brain, glioblastoma (pooled) .e 7385 to 7896 512 to 1       512/512
(100 %)
0 diff
(100 %id)
DB303839 brain .e 7387 to 7908 522 to 1       522/531
(98 %)
0 diff
(100 %id)
DB569784 hypothalamus .e 7402 to 7908 1 to 507     Submitted on the opposite strand 507/507
(100 %)
0 diff
(100 %id)
BM684908 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .e 7405 to 7903 513 to 16   fully sequenced, AAA   498/498
(100 %)
0 diff
(100 %id)
AV723249 hypothalamus .e 7406 to 7911 543 to 41     Submitted on the opposite strand 503/636
(79 %)
0 diff
(100 %id)
AI478293 Kidney .e 7417 to 7908 492 to 1       492/492
(100 %)
0 diff
(100 %id)
DB570728 hypothalamus .e 7418 to 7903 1 to 486     Submitted on the opposite strand 486/486
(100 %)
0 diff
(100 %id)
DB550184 hippocampus .e 7420 to 7903 1 to 484     Submitted on the opposite strand 484/484
(100 %)
0 diff
(100 %id)
AI140409 heart .e 7423 to 7903 481 to 1       481/481
(100 %)
0 diff
(100 %id)
BE673032 pooled germ cell tumors .e 7425 to 7903 489 to 11   AAA   479/479
(100 %)
0 diff
(100 %id)
DB573178 hypothalamus .e 7429 to 7908 1 to 480     Submitted on the opposite strand 480/480
(100 %)
0 diff
(100 %id)
AW571653 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .e 7439 to 7905 467 to 1       467/467
(100 %)
0 diff
(100 %id)
DB540825 hippocampus .e 7441 to 7903 1 to 463     Submitted on the opposite strand 463/463
(100 %)
0 diff
(100 %id)
AW271770 Kidney .e 7443 to 7903 461 to 1       461/461
(100 %)
0 diff
(100 %id)
AI363072 brain, glioblastoma (pooled) .e 7450 to 7911 462 to 1       462/462
(100 %)
0 diff
(100 %id)
AA099295 uterus .e 7452 to 7905 454 to 1       454/454
(100 %)
0 diff
(100 %id)
DB554622 hypothalamus .e 7455 to 7903 1 to 449     Submitted on the opposite strand 449/449
(100 %)
3 diff
(99.4 %id)
DB537049 hippocampus .e 7462 to 7903 1 to 442     Submitted on the opposite strand 442/442
(100 %)
4 diff
(99.1 %id)
DB563068 hypothalamus .e 7466 to 7903 1 to 438     Submitted on the opposite strand 438/438
(100 %)
0 diff
(100 %id)
DB538269 hippocampus .e 7469 to 7903 1 to 435     Submitted on the opposite strand 435/435
(100 %)
6 diff
(98.7 %id)
CB123917 Liver .e 7473 to 7911 467 to 29     Submitted on the opposite strand 439/467
(94 %)
0 diff
(100 %id)
W73963 heart .e 7479 to 7908 430 to 1       430/430
(100 %)
0 diff
(100 %id)
DB534757 hippocampus .e 7488 to 7903 1 to 417     Submitted on the opposite strand 417/417
(100 %)
1 diff
(99.8 %id)
AI373478 Kidney .e 7489 to 7903 415 to 1       415/415
(100 %)
0 diff
(100 %id)
BI915825 brain .e 7492 to 8232 1 to 740   tiling clone,   740/743
(99 %)
22 diff
(97.1 %id)
TI_57243583   .e 7492 to 8232 31 to 770       740/773
(95 %)
22 diff
(97.2 %id)
DB563967 hypothalamus .e 7493 to 7908 1 to 416     Submitted on the opposite strand 416/416
(100 %)
0 diff
(100 %id)
DB559918 hypothalamus .e 7496 to 7908 1 to 413     Submitted on the opposite strand 413/413
(100 %)
0 diff
(100 %id)
AI362240 brain, glioblastoma (pooled) .e 7497 to 7900 404 to 1       404/404
(100 %)
0 diff
(100 %id)
AI243360 pooled .e 7503 to 7906 404 to 1       404/404
(100 %)
0 diff
(100 %id)
BF198125 skin, normal, 4 pooled samples .e 7504 to 7903 400 to 1       400/400
(100 %)
0 diff
(100 %id)
DB530476 hippocampus .e 7515 to 7903 1 to 389     Submitted on the opposite strand 389/389
(100 %)
0 diff
(100 %id)
N41307 placenta .e 7524 to 7900 1 to 377   fully sequenced,   377/377
(100 %)
0 diff
(100 %id)
AA906260 pooled .e 7526 to 7910 385 to 1       385/385
(100 %)
0 diff
(100 %id)
AA478104   .e 7541 to 7907 367 to 1       367/367
(100 %)
0 diff
(100 %id)
AI193150 lung .e 7549 to 7861 1 to 313     Submitted on the opposite strand 313/313
(100 %)
0 diff
(100 %id)
N64786 multiple sclerosis lesions .e 7567 to 7903 337 to 1   fully sequenced,   337/337
(100 %)
0 diff
(100 %id)
AA984612 schizophrenic brain S-11 frontal lobe .e 7583 to 7902 320 to 1       320/320
(100 %)
0 diff
(100 %id)
DB530812 hippocampus .e 7615 to 7903 1 to 287     Submitted on the opposite strand 287/287
(100 %)
18 diff
(93.8 %id)
AI744628 pooled .e 7616 to 7903 314 to 27   AAA   288/288
(100 %)
0 diff
(100 %id)
BF346518 anaplastic oligodendroglioma with 1p/19qloss, brain .e 7627 to 8223 1 to 601       601/909
(66 %)
17 diff
(98.2 %id)
F09047 brain, total brain .e 7630 to 7903 274 to 1       274/274
(100 %)
2 diff
(99.3 %id)
AI563911 anaplastic oligodendroglioma, brain .e 7630 to 7846 1 to 217     Submitted on the opposite strand 217/217
(100 %)
0 diff
(100 %id)
T34363 brain .e 7637 to 7903 267 to 1       267/267
(100 %)
0 diff
(100 %id)
Z39024 brain, total brain .e 7647 to 7903 257 to 1       257/257
(100 %)
0 diff
(100 %id)
BF592851 pooled germ cell tumors .e 7648 to 7903 256 to 1       256/256
(100 %)
0 diff
(100 %id)
N30694 placenta .e 7747 to 7903 175 to 19   fully sequenced, AAA   157/157
(100 %)
0 diff
(100 %id)
FN049258 breast carcinoma .e 7780 to 7880 1 to 97       97/98
(98 %)
6 diff
(93.9 %id)
BX495258 Liver .e 7929 to 8321 1 to 394   tiling clone,   394/394
(100 %)
13 diff
(96.8 %id)
H05190 whole brain .e 8137 to 8548 10 to 422   tiling clone,   413/422
(97 %)
6 diff
(98.6 %id)
R51134 whole brain .e 8184 to 8565 1 to 384       384/384
(100 %)
7 diff
(98.2 %id)
AI366375 brain, hippocampus (see description) .e 8395 to 8741 24 to 366   tiling clone,   343/366
(93 %)
11 diff
(97.0 %id)
AI745186 pooled .e 8426 to 8857 1 to 432   AAA Submitted on the opposite strand 432/432
(100 %)
6 diff
(98.7 %id)
BG206448   .e 8457 to 9269 1 to 811       811/812
(99 %)
11 diff
(98.7 %id)
BG221007   .e 8457 to 9262 1 to 804       804/804
(100 %)
32 diff
(96.1 %id)
FN075021 breast carcinoma .e 8480 to 8541 1 to 62       62/67
(92 %)
1 diff
(98.6 %id)
FN172495 breast carcinoma .e 8535 to 8626 1 to 94       94/94
(100 %)
7 diff
(92.6 %id)
BM804234 eye, retinoblastoma .e 8597 to 9475 1 to 886   AAA   886/1067
(83 %)
18 diff
(98.4 %id)
BU581116 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .e 8643 to 9263 1 to 621       621/621
(100 %)
4 diff
(99.4 %id)
TI_154122732   .e 8651 to 9485 916 to 88   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 829/1003
(82 %)
17 diff
(98.4 %id)
TI_154110540   .e 8656 to 9485 893 to 68   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 826/967
(85 %)
12 diff
(98.8 %id)
AV645609 corresponding non cancerous liver tissue .e 8663 to 8996 338 to 5       334/338
(98 %)
0 diff
(100 %id)
CA310708 Human Lung Epithelial cells, lung .e 8663 to 9380 1 to 718   tiling clone, Submitted on the opposite strand 718/718
(100 %)
3 diff
(99.6 %id)
TI_149271876   .e 8664 to 9485 905 to 90   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 816/1005
(81 %)
9 diff
(99.2 %id)
TI_149281485   .e 8664 to 9485 892 to 78   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 815/817
(99 %)
18 diff
(97.8 %id)
AI080322 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 8677 to 9021 1 to 345     Submitted on the opposite strand 345/345
(100 %)
0 diff
(100 %id)
AI360317 anaplastic oligodendroglioma, brain .e 8678 to 9131 1 to 454     Submitted on the opposite strand 454/454
(100 %)
0 diff
(100 %id)
AA612816 colon, colon tumor RER+ .e 8679 to 9107 1 to 429     Submitted on the opposite strand 429/429
(100 %)
0 diff
(100 %id)
BF855970 prostate_normal .e 8683 to 9145 474 to 13     Submitted on the opposite strand 462/474
(97 %)
0 diff
(100 %id)
BY796384 eye .e 8693 to 9232 1 to 540       540/540
(100 %)
0 diff
(100 %id)
BU674703 lung, Primary Lung Epithelial Cells .e 8703 to 9485 793 to 17   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 777/777
(100 %)
6 diff
(99.3 %id)
BQ019176 lung, Metastatic Chondrosarcoma .e 8713 to 9485 787 to 17   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 771/771
(100 %)
6 diff
(99.3 %id)
TI_149284379   .e 8736 to 9508 826 to 67       760/881
(86 %)
0 diff
(100 %id)
BI049652 placenta_normal .e 8737 to 8955 218 to 1       218/218
(100 %)
4 diff
(98.2 %id)
BM995417 Chondrosarcoma, Left Pubic Bone .e 8772 to 9485 729 to 17   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 713/716
(99 %)
5 diff
(99.4 %id)
FN046897 breast carcinoma .e 8782 to 8889 1 to 105       105/106
(99 %)
6 diff
(94.4 %id)
CA311162 Human Lung Epithelial cells, lung .e 8782 to 9485 720 to 17   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 704/704
(100 %)
1 diff
(99.9 %id)
CN479977 Chondrosarcoma, Left Pubic Bone .e 8834 to 9485 668 to 17   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 652/652
(100 %)
3 diff
(99.6 %id)
BF348123 anaplastic oligodendroglioma with 1p/19qloss, brain .e 8835 to 9483 42 to 688       647/877
(73 %)
6 diff
(99.4 %id)
AI114716 Liver .e 8836 to 9485 667 to 19   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 649/650
(99 %)
1 diff
(99.9 %id)
AA279636 germinal center B cell .e 8840 to 9130 1 to 291       291/291
(100 %)
4 diff
(98.7 %id)
CN295279 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 8876 to 9485 1 to 610   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 610/610
(100 %)
0 diff
(100 %id)
AI885205 anaplastic oligodendroglioma, brain .e 8883 to 9485 611 to 9       603/611
(98 %)
0 diff
(100 %id)
BM992833 lung, Metastatic Chondrosarcoma .e 8884 to 9485 617 to 17   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 601/601
(100 %)
2 diff
(99.7 %id)
BU680540 lung .e 8886 to 9485 616 to 17   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 600/600
(100 %)
1 diff
(99.9 %id)
BM983438 lung, Primary Lung Epithelial Cells .e 8894 to 9485 608 to 17   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 592/592
(100 %)
0 diff
(100 %id)
BQ011067 placenta .e 8895 to 9501 620 to 13   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 608/608
(100 %)
1 diff
(99.9 %id)
DB356657 whole embryo, mainly head .e 8922 to 9485 562 to 1       562/565
(99 %)
12 diff
(97.9 %id)
DB304898 brain .e 8944 to 9485 543 to 1       543/543
(100 %)
1 diff
(99.9 %id)
BE644914 pooled .e 8947 to 9484 538 to 1       538/538
(100 %)
0 diff
(100 %id)
AI091624 parathyroid gland, parathyroid tumor .e 8948 to 9491 544 to 1       544/544
(100 %)
0 diff
(100 %id)
AW068390 Bone, Hip .e 8990 to 9479 501 to 12       490/501
(97 %)
0 diff
(100 %id)
BE466275 malignant melanoma, metastatic to lymphnode, skin .e 8998 to 9486 489 to 1       489/489
(100 %)
0 diff
(100 %id)
AV720839 corresponding non cancerous liver tissue .e 9005 to 9467 469 to 8     Submitted on the opposite strand 462/469
(98 %)
0 diff
(100 %id)
AV719540 corresponding non cancerous liver tissue .e 9007 to 9370 423 to 60     Submitted on the opposite strand 364/423
(86 %)
0 diff
(100 %id)
BJ993824 hepatoblastoma .e 9023 to 9449 427 to 1       427/427
(100 %)
0 diff
(100 %id)
AW236382 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .e 9024 to 9486 463 to 1       463/463
(100 %)
0 diff
(100 %id)
AW512022 lymph node, lymphoma, follicular mixed small and largecell .e 9025 to 9485 461 to 1       461/461
(100 %)
0 diff
(100 %id)
FN047663 breast carcinoma .e 9038 to 9153 1 to 116       116/116
(100 %)
0 diff
(100 %id)
FN153202 breast carcinoma .e 9043 to 9110 1 to 69       69/70
(98 %)
2 diff
(97.2 %id)
AI384072 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 9045 to 9492 448 to 1       448/448
(100 %)
0 diff
(100 %id)
AI754977 bone marrow stroma .e 9046 to 9485 459 to 20   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 440/440
(100 %)
0 diff
(100 %id)
AI745294 pooled .e 9049 to 9485 448 to 12   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 437/437
(100 %)
0 diff
(100 %id)
AI383757   .e 9069 to 9488 420 to 1       420/420
(100 %)
0 diff
(100 %id)
AW028301 thymus, pooled .e 9081 to 9489 409 to 1       409/409
(100 %)
0 diff
(100 %id)
DB552102 hippocampus .e 9090 to 9552 1 to 463   tiling clone, Submitted on the opposite strand 463/463
(100 %)
0 diff
(100 %id)
AA742313 germinal center B cell .e 9113 to 9494 382 to 1       382/382
(100 %)
0 diff
(100 %id)
H05147 whole brain .e 9125 to 9494 372 to 1       372/372
(100 %)
4 diff
(99.0 %id)
R51027 whole brain .e 9131 to 9494 368 to 1       368/371
(99 %)
17 diff
(95.5 %id)
AA280004 germinal center B cell .e 9145 to 9485 341 to 1       341/341
(100 %)
0 diff
(100 %id)
AA489386   .e 9168 to 9486 320 to 1       320/320
(100 %)
2 diff
(99.4 %id)
CN370908 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 9204 to 9865 1 to 664       664/664
(100 %)
2 diff
(99.7 %id)
AW050497 serous papillary carcinoma, high grade, 2pooled tumors, uterus .e 9210 to 9485 276 to 1       276/276
(100 %)
0 diff
(100 %id)
AI565215 pooled .e 9231 to 9485 255 to 1       255/255
(100 %)
0 diff
(100 %id)
CX783612 human embryonic stem cells .e 9260 to 10000 1 to 740       740/740
(100 %)
3 diff
(99.6 %id)
BU178149 melanotic melanoma, skin .e 9308 to 10141 1 to 841       841/854
(98 %)
11 diff
(98.8 %id)
CX870693 embryonic stem .e 9335 to 10189 1 to 856   tiling clone,   856/856
(100 %)
1 diff
(99.9 %id)
AW513028 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .e 9345 to 9485 141 to 1       141/141
(100 %)
0 diff
(100 %id)
EC555896 Prostate .e 9373 to 9489 115 to 1       115/115
(100 %)
5 diff
(95.7 %id)
FN151548 breast carcinoma .e 9378 to 9484 1 to 107       107/109
(98 %)
1 diff
(99.1 %id)
DA271251 caudate nucleus .e 9413 to 9997 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
AA290788 ovarian tumor, ovary .e 9488 to 9964 1 to 477       477/478
(99 %)
1 diff
(99.8 %id)
AL118610 amygdala .e 9514 to 10090 1 to 577       577/577
(100 %)
0 diff
(100 %id)
AW902089 nervous_normal .e 9523 to 9941 438 to 23       416/438
(94 %)
0 diff
(100 %id)
DB290303 uterus .e 9536 to 10104 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
AA412385   .e 9538 to 9927 1 to 390       390/390
(100 %)
0 diff
(100 %id)
CB215721 normal endometrium, late proliferativephase, cycle day 13, uterus .e 9561 to 10166 1 to 606       606/606
(100 %)
0 diff
(100 %id)
BM720133 eye, fetal eye .e 9570 to 10106 1 to 537     Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 537/537
(100 %)
1 diff
(99.9 %id)
Z28670 leg muscle, skeletal muscle .e 9578 to 9795 1 to 218       218/220
(99 %)
1 diff
(99.6 %id)
AW351759 colon .e 9579 to 10120 1 to 545       545/545
(100 %)
5 diff
(99.1 %id)
BM991260 lung, Lung Focal Fibrosis .e 9582 to 10104 2 to 524   AAA Submitted on the opposite strand 523/533
(98 %)
27 diff
(95.0 %id)
BU520814 leiomyosarcoma, uterus .e 9617 to 10259 1 to 645       645/862
(74 %)
7 diff
(99.2 %id)
AA777235 liver and spleen .e 9622 to 9980 359 to 1       359/359
(100 %)
0 diff
(100 %id)
BG574250 breast, mammary adenocarcinoma, cell line .e 9655 to 10388 1 to 735       735/735
(100 %)
9 diff
(98.8 %id)
CN370907 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 9669 to 10416 1 to 748       748/748
(100 %)
3 diff
(99.6 %id)
BG178920 adenocarcinoma, cell line, Prostate .e 9698 to 10363 1 to 664       664/664
(100 %)
2 diff
(99.7 %id)
BM470723 leiomyosarcoma, uterus .e 9729 to 10751 31 to 1061       1031/1066
(96 %)
25 diff
(97.7 %id)
BE005618 breast_normal .e 9735 to 10163 429 to 1     Submitted on the opposite strand 429/429
(100 %)
6 diff
(98.7 %id)
BE005687 breast_normal .e 9735 to 10199 466 to 5     Submitted on the opposite strand 462/466
(99 %)
0 diff
(100 %id)
AA317356 retina .e 9745 to 10068 1 to 324       324/324
(100 %)
0 diff
(100 %id)
AW960680   .e 9746 to 10368 1 to 623       623/626
(99 %)
2 diff
(99.7 %id)
ES312663 beard hair, skin .e 9759 to 9886 1 to 128       128/128
(100 %)
0 diff
(100 %id)
BX431377 placenta .e 9765 to 10613 1 to 854       854/982
(86 %)
38 diff
(96.2 %id)
AL596541 human spinal cord .e 9765 to 10318 1 to 554       554/554
(100 %)
0 diff
(100 %id)
CB145848 Liver .e 9973 to 10377 1 to 405       405/405
(100 %)
0 diff
(100 %id)
BQ337235 marrow .e 10029 to 10299 286 to 15       272/286
(95 %)
9 diff
(96.9 %id)
AW297458   .e 10032 to 10269 2 to 238   AAA Submitted on the opposite strand 237/248
(95 %)
2 diff
(99.2 %id)
TI_154034484   .e 10039 to 10746 781 to 79   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 703/797
(88 %)
5 diff
(99.4 %id)
AA453826 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 10046 to 10435 1 to 391       391/391
(100 %)
2 diff
(99.5 %id)
AA081946   .e 10048 to 10250 1 to 203       203/203
(100 %)
0 diff
(100 %id)
W31884.
matches multiple genes
parathyroid gland, parathyroid tumor .e 10054 to 10147 95 to 2     Submitted on the opposite strand, also hits gene RAPGEF5 94/104
(90 %)
0 diff
(100 %id)
TI_149277444   .e 10066 to 10746 769 to 89   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 681/712
(95 %)
1 diff
(99.9 %id)
BU677676 lung .e 10066 to 10746 699 to 19   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 681/688
(98 %)
1 diff
(99.9 %id)
W93313 liver and spleen .e 10117 to 10403 1 to 290   fully sequenced,   290/290
(100 %)
2 diff
(99.4 %id)
EB385839 eye, optic nerve .e 10126 to 10949 1 to 824   tiling clone,   824/824
(100 %)
0 diff
(100 %id)
CB216386 normal endometrium, mid-secretory phase,cycle day 23, uterus .e 10192 to 10791 1 to 606       606/606
(100 %)
2 diff
(99.7 %id)
N88350   .e 10248 to 10435 1 to 188       188/188
(100 %)
0 diff
(100 %id)
CN370906 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 10295 to 10927 1 to 638       638/638
(100 %)
2 diff
(99.7 %id)
CN370905 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 10331 to 10736 1 to 406       406/406
(100 %)
0 diff
(100 %id)
W92817 liver and spleen .e 10373 to 10748 381 to 1   fully sequenced,   381/381
(100 %)
3 diff
(99.3 %id)
BQ223584 embryonal carcinoma, cell line, testis .e 10386 to 11108 1 to 731       731/946
(77 %)
26 diff
(97.3 %id)
CA443572 lung, Metastatic Chondrosarcoma .e 10438 to 10746 327 to 19   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 309/309
(100 %)
0 diff
(100 %id)
Z24967 leg muscle, skeletal muscle .e 10440 to 10710 271 to 1       271/271
(100 %)
5 diff
(98.2 %id)
AA284979 ovarian tumor, ovary .e 10450 to 10746 297 to 1       297/297
(100 %)
0 diff
(100 %id)
CK002286 brain/CNS, Bulk tissue from Human Spinal cord .e 10469 to 11111 1 to 643       643/643
(100 %)
2 diff
(99.7 %id)
BU567585 testis .e 10498 to 11229 1 to 734       734/833
(88 %)
15 diff
(98.2 %id)
T34625 blood, white blood cells .e 10502 to 10811 1 to 310       310/310
(100 %)
0 diff
(100 %id)
BU568796 testis .e 10503 to 11279 1 to 781       781/789
(98 %)
19 diff
(97.6 %id)
CN370904 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 10517 to 11121 1 to 605       605/605
(100 %)
0 diff
(100 %id)
BG252969 adenocarcinoma, cell line, Liver .e 10527 to 11235 1 to 709       709/859
(82 %)
11 diff
(98.8 %id)
AW006480 colon .e 10539 to 11055 517 to 1       517/517
(100 %)
0 diff
(100 %id)
BU928807 brain, glioblastoma .e 10562 to 11311 1 to 753       753/772
(97 %)
10 diff
(98.8 %id)
BM992238 Bone, Subchondral Bone .e 10612 to 11274 681 to 19   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 663/663
(100 %)
1 diff
(99.9 %id)
BG403678 bladder, transitional cell papilloma, cell line .e 10675 to 11475 1 to 803       803/828
(96 %)
29 diff
(96.5 %id)
TI_154125145   .e 10708 to 11564 927 to 79   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 849/988
(85 %)
22 diff
(97.8 %id)
DA224442 brain .e 10712 to 11252 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
TI_154131791   .e 10714 to 11561 968 to 122   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 847/943
(89 %)
13 diff
(98.7 %id)
BU941500 mixed (pool of 40 RNAs) .e 10722 to 11510 1 to 798       798/799
(99 %)
28 diff
(96.5 %id)
TI_149312004   .e 10723 to 11564 921 to 84   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 838/996
(84 %)
10 diff
(99.0 %id)
DA212400 brain .e 10730 to 11270 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
R63053 placenta .e 10734 to 11094 1 to 362       362/384
(94 %)
6 diff
(98.5 %id)
DB264814 uterus .e 10776 to 11367 2 to 594   capped   593/593
(100 %)
1 diff
(99.9 %id)
AL043504 testis .e 10811 to 11147 1 to 337   fully sequenced,   337/337
(100 %)
0 diff
(100 %id)
BM977732 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 10822 to 11564 760 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 742/742
(100 %)
3 diff
(99.6 %id)
BG493818 lung, mucoepidermoid carcinoma .e 10837 to 11559 1 to 728   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 728/728
(100 %)
9 diff
(98.8 %id)
BM713970 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .e 10844 to 11454 1 to 611       611/611
(100 %)
0 diff
(100 %id)
CA311358 Human Lung Epithelial cells, lung .e 10858 to 11561 722 to 19   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 704/704
(100 %)
2 diff
(99.8 %id)
CA418244 Bone, Human Chondrosarcoma Cell Line .e 10859 to 11561 721 to 19   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 703/703
(100 %)
0 diff
(100 %id)
BU072055 Pancreas, Purified pancreatic islet .e 10889 to 11367 1 to 479       479/479
(100 %)
7 diff
(98.6 %id)
CK902471 Pancreas, Purified pancreatic islet .e 10896 to 11467 1 to 572     Submitted on the opposite strand 572/572
(100 %)
3 diff
(99.5 %id)
BM672054 eye, fetal eye .e 10897 to 11561 683 to 19   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 665/668
(99 %)
0 diff
(100 %id)
CA429064 Cell Line, Chondrosarcoma .e 10915 to 11561 665 to 19   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 647/647
(100 %)
0 diff
(100 %id)
DN918157   .e 10923 to 11561 631 to 1       631/637
(99 %)
11 diff
(98.3 %id)
CA423909 cell lines, Chondrosarcoma .e 10927 to 11561 653 to 19   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 635/635
(100 %)
2 diff
(99.7 %id)
CA426750 cell lines, Chondrosarcoma .e 10950 to 11561 630 to 19   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 612/612
(100 %)
1 diff
(99.9 %id)
CA416068 Chondrosarcoma Cell line .e 10960 to 11564 623 to 19   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 605/605
(100 %)
0 diff
(100 %id)
BU076048 Pancreas, Purified pancreatic islet .e 10972 to 11563 592 to 1       592/592
(100 %)
4 diff
(99.4 %id)
CK902472 Pancreas, Purified pancreatic islet .e 10974 to 11563 601 to 12   AAA Submitted on the opposite strand 590/590
(100 %)
0 diff
(100 %id)
BE002177 breast_normal .e 11004 to 11188 213 to 29     Submitted on the opposite strand 185/220
(84 %)
0 diff
(100 %id)
AA382813 testis .e 11008 to 11252 1 to 245       245/245
(100 %)
0 diff
(100 %id)
AA677775 liver and spleen .e 11012 to 11365 354 to 1       354/354
(100 %)
0 diff
(100 %id)
H41197 brain .e 11035 to 11256 1 to 222       222/222
(100 %)
0 diff
(100 %id)
AW467210 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .e 11063 to 11564 502 to 1       502/502
(100 %)
0 diff
(100 %id)
AA102572   .e 11087 to 11562 480 to 4       477/480
(99 %)
0 diff
(100 %id)
AJ243249 stomach, thyroid .e 11089 to 11559 470 to 1       470/470
(100 %)
1 diff
(99.8 %id)
AW864108 stomach_normal .e 11090 to 11557 485 to 19       467/492
(94 %)
0 diff
(100 %id)
AW864105 stomach_normal .e 11097 to 11557 464 to 4       461/464
(99 %)
0 diff
(100 %id)
DB574053 hypothalamus .e 11099 to 11563 1 to 465     Submitted on the opposite strand 465/465
(100 %)
3 diff
(99.4 %id)
AL043505 testis .e 11117 to 11556 440 to 1   fully sequenced,   440/440
(100 %)
1 diff
(99.8 %id)
AI598029 adenocarcinoma, Pancreas .e 11139 to 11426 12 to 297     Submitted on the opposite strand 286/297
(96 %)
6 diff
(98.0 %id)
AA768310 germinal center B cell .e 11145 to 11561 428 to 12   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 417/417
(100 %)
0 diff
(100 %id)
AA453745 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 11147 to 11564 418 to 1       418/418
(100 %)
0 diff
(100 %id)
CA308212 Alveolar Macrophage, lung .e 11211 to 11960 767 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 749/749
(100 %)
5 diff
(99.4 %id)
AI459820 colon .e 11218 to 11561 344 to 1       344/344
(100 %)
0 diff
(100 %id)
BX501401 Liver .e 11246 to 12016 1 to 772       772/772
(100 %)
4 diff
(99.5 %id)
D62390   .e 11270 to 11542 1 to 273       273/273
(100 %)
0 diff
(100 %id)
H41198 brain .e 11273 to 11545 273 to 1       273/273
(100 %)
0 diff
(100 %id)
CB145623 Liver .e 11281 to 11561 1 to 281   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 281/281
(100 %)
0 diff
(100 %id)
CA312377 Human Lung Epithelial cells, lung .e 11302 to 11561 1 to 258   AAA Submitted on the opposite strand 258/258
(100 %)
5 diff
(98.1 %id)
CN278336 embryonic stem cells, DMSO-treated H9 cellline .e 11320 to 11553 252 to 19   AAA Submitted on the opposite strand 234/242
(96 %)
0 diff
(100 %id)
AA382812 testis .e 11404 to 11561 158 to 1       158/158
(100 %)
0 diff
(100 %id)
R62996 placenta .e 11409 to 11636 229 to 1       229/237
(96 %)
1 diff
(99.6 %id)
BU561485 testis .e 11780 to 12451 1 to 678   tiling clone,   678/769
(88 %)
11 diff
(98.6 %id)
BF574355 muscle (skeletal) .e 11785 to 12478 1 to 694       694/695
(99 %)
10 diff
(98.6 %id)
AK096701 pericardium .e 12010 to 14434 1 to 2425   tiling clone, available from FLJ,   2425/2425
(100 %)
7 diff
(99.8 %id)
DA820694 pericardium .e 12011 to 12552 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
CB409425 maxilla, pooled .e 12152 to 12728 1 to 577   tiling clone,   577/577
(100 %)
0 diff
(100 %id)
DB351782 uterus .e 12500 to 13035 536 to 1       536/536
(100 %)
0 diff
(100 %id)
AW009668 colon .e 12673 to 13210 538 to 1       538/538
(100 %)
0 diff
(100 %id)
BQ879486 dorsal root ganglia .e 12676 to 13602 1 to 932   tiling clone,   932/933
(99 %)
9 diff
(99.1 %id)
DA214028 brain .e 12694 to 13242 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA411187 thalamus .e 13301 to 13955 2 to 656   capped   655/655
(100 %)
2 diff
(99.7 %id)
CF454669 peripheral nervous system .e 13393 to 14151 23 to 779       757/782
(96 %)
14 diff
(98.3 %id)
AL697632 human skeletal muscle .e 13460 to 14066 1 to 608       608/608
(100 %)
2 diff
(99.7 %id)
BX105184 lung .e 13699 to 14430 1 to 733       733/733
(100 %)
6 diff
(99.2 %id)
DA525534 brain .e 13734 to 14304 2 to 572   capped   571/571
(100 %)
5 diff
(99.2 %id)
DA391639 thalamus .e 13787 to 14371 2 to 586   capped   585/585
(100 %)
4 diff
(99.4 %id)
BQ720286 sympathetic trunk .e 13796 to 14672 1 to 888   tiling clone,   888/958
(92 %)
23 diff
(97.6 %id)
DA390185 thalamus .e 13838 to 14440 2 to 603   capped   602/602
(100 %)
6 diff
(99.1 %id)
DB327814 pericardium .e 13924 to 14428 511 to 7       505/511
(98 %)
0 diff
(100 %id)
CR739443   .e 14243 to 15026 1 to 786   tiling clone,   786/786
(100 %)
2 diff
(99.8 %id)
F12845 brain, total brain .e 14530 to 14830 1 to 301       301/301
(100 %)
1 diff
(99.7 %id)
F12090 brain, total brain .e 14530 to 14805 1 to 276       276/276
(100 %)
1 diff
(99.7 %id)
BM720309 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .e 15062 to 15598 1 to 538   tiling clone,   538/538
(100 %)
1 diff
(99.9 %id)
TI_151721074   .e 15606 to 16355 881 to 127   tiling clone, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 755/1049
(71 %)
20 diff
(98.1 %id)
DB304602 brain .e 15792 to 16350 559 to 1       559/559
(100 %)
0 diff
(100 %id)
DB317434 brain .e 15818 to 16350 533 to 1       533/533
(100 %)
0 diff
(100 %id)
F10448 brain, total brain .e 16118 to 16355 238 to 1   tiling clone,   238/238
(100 %)
0 diff
(100 %id)
F09727 brain, total brain .e 16187 to 16355 169 to 1       169/169
(100 %)
0 diff
(100 %id)
AY780788   .f 1 to 942 1 to 942 exact tiling clone,   942/942
(100 %)
1 diff
(99.9 %id)
BF445783 sympathetic trunk .g 1 to 374 374 to 1   tiling clone,   374/374
(100 %)
0 diff
(100 %id)
CB178554 Pancreas, Purified pancreatic islet .g 259 to 855 1 to 598   tiling clone,   596/598
(99 %)
0 diff
(100 %id)
CB178805 Pancreas, Purified pancreatic islet .g 8601 to 9112 512 to 1   tiling clone,   512/512
(100 %)
0 diff
(100 %id)
BE888446 leiomyosarcoma, uterus .h 1 to 725 1 to 724   tiling clone,   724/874
(82 %)
13 diff
(98.6 %id)
R12087 whole brain .h 428 to 799 1 to 381   tiling clone,   381/414
(92 %)
13 diff
(96.9 %id)
R12116 whole brain .h 428 to 721 1 to 297   tiling clone,   297/428
(69 %)
3 diff
(99.3 %id)
R25054 whole brain .h 429 to 799 1 to 380   tiling clone,   380/471
(80 %)
14 diff
(97.1 %id)
R45393 whole brain .h 5330 to 5730 414 to 1   tiling clone,   414/427
(96 %)
27 diff
(93.7 %id)
R36880 whole brain .h 5362 to 5731 378 to 1   tiling clone,   378/378
(100 %)
14 diff
(96.3 %id)
R36870 whole brain .h 5430 to 5730 302 to 1   tiling clone,   302/303
(99 %)
1 diff
(99.7 %id)
BQ883103 dorsal root ganglia .i-u 1 to 616 626 to 1   tiling clone, Submitted on the opposite strand 626/964
(64 %)
15 diff
(98.5 %id)
AK074562 whole embryo, mainly head .i-u 376 to 1803 1 to 1423   tiling clone, available from FLJ,   1423/1423
(100 %)
7 diff
(99.6 %id)
DA570537 whole embryo, mainly head .i-u 377 to 802 2 to 427   tiling clone, capped   426/431
(98 %)
3 diff
(99.4 %id)
CN310750 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .i-u 884 to 1575 1 to 692   tiling clone,   692/692
(100 %)
0 diff
(100 %id)
AI133483 Liver .i-u 1020 to 1665 650 to 5   tiling clone,   646/650
(99 %)
0 diff
(100 %id)
DB357314 whole embryo, mainly head .i-u 1236 to 1803 560 to 1       560/590
(94 %)
12 diff
(98.0 %id)
AA677987 liver and spleen .i-u 1236 to 1650 414 to 1       414/414
(100 %)
2 diff
(99.6 %id)
BX118621   .i-u 1238 to 1664 446 to 20     Submitted on the opposite strand 427/460
(92 %)
0 diff
(100 %id)
AA230150   .i-u 1238 to 1582 7 to 351       345/351
(98 %)
6 diff
(98.3 %id)
F21002 pectoral muscle (after mastectomy) .i-u 1308 to 1651 1 to 346       346/346
(100 %)
5 diff
(98.6 %id)
AA935633 pooled .i-u 1368 to 1805 443 to 7   tiling clone,   437/443
(98 %)
0 diff
(100 %id)
AA228278   .i-u 1422 to 1646 225 to 1       225/225
(100 %)
0 diff
(100 %id)
CB960468 Human Placenta, placenta .j 1 to 700 28 to 726 D181R V182F S183L I184F C186V tiling clone,   699/807
(86 %)
12 diff
(98.6 %id)
CB118463 Liver .k 1 to 613 1 to 613 G145S tiling clone,   613/613
(100 %)
1 diff
(99.9 %id)
DA249790 brain .l 1 to 578 8 to 586 L142P A143C I144D L145S N146E ... tiling clone, capped   579/579
(100 %)
1 diff
(99.9 %id)
DC325073 brain .m 1 to 588 1 to 588 exact tiling clone,   588/588
(100 %)
0 diff
(100 %id)
BX503274 Liver .n 1 to 496 1 to 496 D19G tiling clone,   496/496
(100 %)
3 diff
(99.4 %id)
DB290777 uterus .o 1 to 582 2 to 582   tiling clone, capped   581/581
(100 %)
1 diff
(99.9 %id)
DB238743 trachea .o 99 to 677 2 to 578   capped   577/580
(99 %)
2 diff
(99.7 %id)
BG392017 embryonal carcinoma, cell line, testis .o 182 to 881 1 to 694       694/968
(71 %)
40 diff
(95.9 %id)
BU161411 melanotic melanoma, skin .o 260 to 932 38 to 717       680/902
(75 %)
20 diff
(97.8 %id)
TI_149277395   .o 278 to 1006 794 to 64 exact tiling clone,   731/796
(91 %)
5 diff
(99.4 %id)
DA194762 amygdala .p 1 to 550 2 to 551 exact tiling clone, capped   550/550
(100 %)
2 diff
(99.7 %id)
DA412029 thalamus .q 1 to 453 2 to 454 exact tiling clone, capped   456/456
(100 %)
0 diff
(100 %id)
AV657509 corresponding non cancerous liver tissue Gene QKI, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AV707324 adrenal gland Gene QKI, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AV703583 adrenal gland Gene QKI, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AV705255 adrenal gland Gene QKI, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AV656340 corresponding non cancerous liver tissue Gene QKI, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
BU508110 leiomyosarcoma, uterus Gene QKI, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i-u, .j, .k, .l, .m, .n, .o, .p, .q Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI