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Gene QDPRTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
343 representative clones for gene QDPR back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BI599707 brain, hypothalamus .a 1 to 756 1 to 764   tiling clone,   762/767
(99 %)
22 diff
(97.2 %id)
TI_45213056   .a 2 to 756 124 to 886       761/889
(85 %)
16 diff
(98.3 %id)
DB497527 hypothalamus .a 9 to 514 1 to 506   tiling clone,   506/506
(100 %)
1 diff
(99.9 %id)
DB477070 hippocampus .a 101 to 600 1 to 499       499/499
(100 %)
4 diff
(99.2 %id)
DT216474 brain .a 125 to 738 1 to 614       614/614
(100 %)
1 diff
(99.9 %id)
DB480390 hippocampus .a 125 to 613 1 to 489       489/505
(96 %)
3 diff
(99.5 %id)
DB506637 hypothalamus .a 125 to 599 1 to 475       475/475
(100 %)
0 diff
(100 %id)
AK124382   .a 129 to 1406 1 to 1278   tiling clone, available from FLJ,   1278/1278
(100 %)
0 diff
(100 %id)
DA002432   .a 130 to 691 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
BU839497 hepatocellular carcinoma, cell line, Liver .a 134 to 1073 1 to 946       946/948
(99 %)
28 diff
(97.1 %id)
BF205049 muscle, rhabdomyosarcoma .a 135 to 897 1 to 754       754/1082
(69 %)
15 diff
(98.7 %id)
BG825000 muscle, rhabdomyosarcoma .a 135 to 968 1 to 844       844/844
(100 %)
48 diff
(94.4 %id)
BQ646723 hepatocellular carcinoma, cell line, Liver .a 138 to 991 1 to 862       862/1002
(86 %)
25 diff
(97.6 %id)
BQ643748 hepatocellular carcinoma, cell line, Liver .a 138 to 866 1 to 744       702/1005
(69 %)
23 diff
(97.8 %id)
BG281524 melanotic melanoma, skin .a 142 to 861 1 to 720       720/720
(100 %)
1 diff
(99.9 %id)
BG476260 melanotic melanoma, skin .a 142 to 1048 1 to 898       898/936
(95 %)
34 diff
(96.4 %id)
BF313632 brain, neuroblastoma .a 143 to 976 1 to 834       834/891
(93 %)
20 diff
(97.8 %id)
DB476689 hippocampus .a 152 to 649 1 to 498       498/498
(100 %)
1 diff
(99.8 %id)
DB490334 hypothalamus .a 152 to 326 1 to 175       175/175
(100 %)
1 diff
(99.5 %id)
DB492391 hypothalamus .a 152 to 605 1 to 449       449/449
(100 %)
10 diff
(97.8 %id)
DB501249 hypothalamus .a 152 to 644 1 to 493       493/493
(100 %)
0 diff
(100 %id)
DB504494 hypothalamus .a 152 to 624 1 to 473       473/473
(100 %)
0 diff
(100 %id)
CB961461 placenta, pre-eclamptic placenta .a 152 to 851 28 to 730       703/772
(91 %)
9 diff
(98.9 %id)
BG027229 Bone, osteosarcoma, cell line .a 158 to 900 1 to 743       743/759
(97 %)
9 diff
(98.9 %id)
BF967427 brain, hypothalamus .a 160 to 696 1 to 537   fully sequenced,   537/537
(100 %)
3 diff
(99.5 %id)
BE385524 melanotic melanoma, skin .a 161 to 852 1 to 689       689/695
(99 %)
8 diff
(98.9 %id)
BE389711 endometrium, adenocarcinoma cell line, uterus .a 162 to 817 1 to 658       658/658
(100 %)
6 diff
(99.1 %id)
BE729668 melanotic melanoma, skin .a 162 to 965 1 to 798       798/1019
(78 %)
21 diff
(98.0 %id)
DB495690 hypothalamus .a 169 to 665 1 to 497       497/498
(99 %)
1 diff
(99.8 %id)
BM710428 eye, RPE and Choroid .a 170 to 653 1 to 484       484/484
(100 %)
0 diff
(100 %id)
CF140259 CNCAP(3)T-225 cell line, Prostate .a 212 to 654 8 to 450       443/450
(98 %)
0 diff
(100 %id)
TI_154170710   .a 212 to 800 80 to 671       592/944
(62 %)
12 diff
(98.8 %id)
BF967647 brain, hypothalamus .a 666 to 1330 667 to 1   fully sequenced,   667/667
(100 %)
3 diff
(99.6 %id)
BM671873 eye, RPE and Choroid .a 822 to 1406 603 to 19   AAA   585/585
(100 %)
5 diff
(99.2 %id)
DB294985   .a 842 to 1406 565 to 1       565/565
(100 %)
0 diff
(100 %id)
TI_44000559   .b 1 to 789 123 to 914       792/914
(86 %)
6 diff
(99.4 %id)
BI544438 brain, hippocampus .b 2 to 789 1 to 791   tiling clone,   791/791
(100 %)
10 diff
(98.8 %id)
NM_000320.2   .b 7 to 1665 1 to 1659 exact RefSeq,   1659/1660
(99 %)
5 diff
(99.7 %id)
BI552951 brain, hippocampus .b 17 to 872 1 to 861       861/863
(99 %)
16 diff
(98.2 %id)
DB502304 hypothalamus .b 18 to 476 1 to 459       459/459
(100 %)
0 diff
(100 %id)
DB502137 hypothalamus .b 35 to 510 1 to 476       476/476
(100 %)
0 diff
(100 %id)
TI_44001106   .b 35 to 907 87 to 967       881/970
(90 %)
19 diff
(98.1 %id)
TI_45211992   .b 39 to 797 94 to 854       761/856
(88 %)
6 diff
(99.3 %id)
BG709599 brain, hypothalamus .b 64 to 946 1 to 884 A176S I178S A179L V180C L181S ...     884/884
(100 %)
19 diff
(97.9 %id)
TI_44166627   .b 72 to 831 82 to 839       758/839
(90 %)
4 diff
(99.6 %id)
BQ070404 brain, neuroblastoma, cell line .b 82 to 970 1 to 898 E196*     898/1017
(88 %)
26 diff
(97.5 %id)
BM565028 insulinoma, Pancreas .b 105 to 586 7 to 488   fully sequenced, Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 482/488
(98 %)
1 diff
(99.8 %id)
CR614918 Neuroblastoma Cot 10-normalized .b 110 to 1374 1 to 1265 exact     1265/1265
(100 %)
0 diff
(100 %id)
BX403099 Neuroblastoma Cot 10-normalized .b 110 to 873 1 to 763       763/763
(100 %)
3 diff
(99.7 %id)
BG706213 brain, hypothalamus .b 118 to 983 1 to 867 S51N P188T N190T Q229R     867/867
(100 %)
9 diff
(99.0 %id)
TI_44342641   .b 120 to 907 116 to 904       789/905
(87 %)
7 diff
(99.3 %id)
BG037025 brain, hypothalamus .b 124 to 846 1 to 717   fully sequenced,   717/717
(100 %)
14 diff
(98.1 %id)
CR596771 adult brain .b 127 to 1626 1 to 1500 exact tiling clone,   1500/1500
(100 %)
0 diff
(100 %id)
DB482800 hippocampus .b 133 to 628 1 to 496       496/496
(100 %)
0 diff
(100 %id)
BI757374 brain .b 135 to 945 1 to 812 T203D P204T E206R F207I L208P ...     812/812
(100 %)
5 diff
(99.4 %id)
TI_57220328   .b 135 to 945 70 to 881 T203D P204T E206R F207I L208P ...     812/881
(92 %)
5 diff
(99.5 %id)
CR608945 neuroblastoma .b 139 to 1377 1 to 1239 exact     1239/1239
(100 %)
0 diff
(100 %id)
TI_45213655   .b 144 to 950 81 to 891 R25G G218R K219E N220K R221P ...     811/891
(91 %)
4 diff
(99.6 %id)
BI546330 brain, hippocampus .b 146 to 1010 1 to 872 T211N H213P D214*     872/872
(100 %)
26 diff
(97.1 %id)
BI597886 brain, hypothalamus .b 146 to 1011 1 to 867 K154N P222R G235R R236T E238R ...     867/867
(100 %)
20 diff
(97.7 %id)
BI598887 brain, hypothalamus .b 146 to 1061 1 to 916 Q159K N220K R221P P222T S223E ...     916/923
(99 %)
24 diff
(97.4 %id)
BI602370 brain, hypothalamus .b 146 to 1038 1 to 904 P222R S223K S224L G225R S226K ...     904/904
(100 %)
22 diff
(97.6 %id)
CD051115 embryonic trophoblasts, made from WA01 stemcells .b 147 to 1012 21 to 895 A176G K219X N220K R221P P222T ...     875/946
(92 %)
13 diff
(98.7 %id)
BG705333 brain, hippocampus .b 147 to 957 1 to 807 P145A P222R S223A S224Q G225E ...     807/808
(99 %)
13 diff
(98.4 %id)
BI604218 brain, hypothalamus .b 149 to 950 1 to 806 R25G G218R K219E N220K R221P ...     806/806
(100 %)
6 diff
(99.3 %id)
BP308321 brain .b 149 to 731 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BI549780 brain, hippocampus .b 150 to 1011 1 to 864 Q159K F207X H213P D214*     864/864
(100 %)
19 diff
(97.9 %id)
BP194892 brain .b 151 to 731 1 to 582       582/582
(100 %)
0 diff
(100 %id)
AK223437 cerebellum .b 151 to 1434 1 to 1284 exact     1284/1284
(100 %)
7 diff
(99.5 %id)
AK289773 brain .b 151 to 1546 1 to 1396 exact     1396/1396
(100 %)
1 diff
(100.0 %id)
DT216388 brain .b 151 to 830 1 to 680       680/680
(100 %)
0 diff
(100 %id)
DT216395 brain .b 151 to 754 1 to 604       604/604
(100 %)
0 diff
(100 %id)
DT216823 brain .b 151 to 835 1 to 685       685/685
(100 %)
1 diff
(99.9 %id)
DT216895 brain .b 151 to 834 1 to 684       684/684
(100 %)
0 diff
(100 %id)
DT218631 brain .b 151 to 798 1 to 648       648/648
(100 %)
0 diff
(100 %id)
DT219376 brain .b 151 to 788 1 to 638       638/638
(100 %)
1 diff
(99.9 %id)
DT219615 brain .b 151 to 756 1 to 606       606/606
(100 %)
0 diff
(100 %id)
BP252166 Kidney .b 151 to 731 1 to 582       582/582
(100 %)
0 diff
(100 %id)
TI_44166515   .b 151 to 1010 91 to 957 T211N H213P D214*     867/957
(90 %)
21 diff
(97.9 %id)
TI_45210926   .b 151 to 1011 92 to 953 K154N P222R G235R R236T E238R ...     862/953
(90 %)
16 diff
(98.4 %id)
TI_45213190   .b 151 to 1061 126 to 1036 Q159K N220K R221P P222T S223E ...     911/1043
(87 %)
20 diff
(98.1 %id)
TI_45215687   .b 151 to 1038 96 to 994 P222R S223K S224L G225R S226K ...     899/994
(90 %)
18 diff
(98.2 %id)
AU310814 neuroblastoma .b 151 to 731 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
BM785791 Ascites, stomach .b 151 to 752 1 to 602       602/602
(100 %)
0 diff
(100 %id)
BP362055 thalamus .b 151 to 733 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DA131873 alzheimer cortex .b 152 to 687 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DA360269 subthalamic nucleus .b 152 to 706 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
TI_44171249   .b 154 to 1011 94 to 952 Q159K F207X H213P D214*     859/952
(90 %)
14 diff
(98.6 %id)
DA900620 skeletal muscle .b 154 to 721 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BG706000 brain, hypothalamus .b 155 to 1089 6 to 950 W215L I216D T217H G218R K219E ...     945/972
(97 %)
37 diff
(96.2 %id)
BI551267 brain, hippocampus .b 155 to 1054 7 to 920 I178S A179L V180C L181S P182R ...     914/940
(97 %)
32 diff
(96.6 %id)
TI_44171390   .b 155 to 1054 94 to 1007 I178S A179L V180C L181S P182R ...     914/1027
(88 %)
32 diff
(96.9 %id)
TI_45213897   .b 155 to 941 131 to 917 H213P D214*     787/917
(85 %)
5 diff
(99.5 %id)
DA563162 heart .b 158 to 723 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
CN482071 eye .b 161 to 706 1 to 546       546/546
(100 %)
0 diff
(100 %id)
BU856078 ovary, teratocarcinoma, cell line .b 161 to 1021 11 to 882 K219E N220K R221P P222N S223R ...     872/893
(97 %)
20 diff
(97.8 %id)
CN413939 embryonic stem cells, DMSO-treated H9 cellline .b 162 to 888 1 to 727       727/727
(100 %)
0 diff
(100 %id)
CR622555 Neuroblastoma Cot 25-normalized .b 162 to 1328 1 to 1167 exact     1167/1167
(100 %)
0 diff
(100 %id)
CR624599 Neuroblastoma Cot 25-normalized .b 162 to 1623 1 to 1462 exact     1462/1462
(100 %)
0 diff
(100 %id)
AL526559 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .b 162 to 653 1 to 492   fully sequenced,   492/492
(100 %)
2 diff
(99.6 %id)
BF206226 brain, neuroblastoma .b 162 to 1012 1 to 855 I216D T217H G218R K219E N220K ...     855/1078
(79 %)
31 diff
(97.2 %id)
BM906751 ovary (pool of 3) .b 162 to 1001 8 to 850 exact     843/1164
(72 %)
12 diff
(99.0 %id)
BQ222920 melanotic melanoma, skin .b 162 to 993 34 to 867 T211N H213P D214*     834/869
(95 %)
8 diff
(99.1 %id)
TI_45210719   .b 162 to 1048 82 to 959 I228N Q229P R236K T237D E238G ...     878/977
(89 %)
18 diff
(98.2 %id)
BC000576 Brain, neuroblastoma .b 163 to 1525 1 to 1363 exact available from MGC, AAA   1363/1363
(100 %)
4 diff
(99.8 %id)
DB498427 hypothalamus .b 163 to 681 1 to 519       519/519
(100 %)
0 diff
(100 %id)
DB506167 hypothalamus .b 163 to 633 1 to 471       471/471
(100 %)
0 diff
(100 %id)
BM803692 leiomyosarcoma, uterus .b 163 to 1085 1 to 928 K192X G235R R236K T237D E238G ...     928/1046
(88 %)
14 diff
(98.7 %id)
X04882   .b 163 to 1378 1 to 1216 S51T     1216/1216
(100 %)
5 diff
(99.6 %id)
BG752102 eye, normal pigmented retinal epithelium .b 164 to 985 1 to 824 S226K L227P I228N Q229P V230G ...     824/824
(100 %)
2 diff
(99.8 %id)
BM876558 insulinoma, Pancreas .b 164 to 711 1 to 548       548/548
(100 %)
4 diff
(99.3 %id)
BM806462 melanotic melanoma, skin .b 165 to 1132 1 to 976 exact     976/1004
(97 %)
32 diff
(96.9 %id)
CR983965 T-Lymphocytes .b 165 to 932 1 to 769 S223E S224L G225T S226K L227P ...     769/771
(99 %)
3 diff
(99.7 %id)
CN413947 embryonic stem cells, DMSO-treated H9 cellline .b 167 to 655 1 to 489       489/489
(100 %)
0 diff
(100 %id)
BU183925 melanotic melanoma, skin .b 167 to 998 12 to 854 G225X V231G G235R R236K T237D ...     843/880
(95 %)
23 diff
(97.4 %id)
BQ649028 hepatocellular carcinoma, cell line, Liver .b 167 to 1083 10 to 930 L208P V209S E210*     921/933
(98 %)
17 diff
(98.2 %id)
CA951079 Pancreas, Purified pancreatic islet .b 167 to 801 10 to 644       635/650
(97 %)
2 diff
(99.7 %id)
BI711698 insulinoma, Pancreas .b 168 to 729 1 to 562       562/562
(100 %)
5 diff
(99.2 %id)
BM545095 ovary (pool of 3) .b 169 to 1256 1 to 1100 N220K     1100/1100
(100 %)
30 diff
(97.3 %id)
TI_45214689   .b 169 to 1032 78 to 954 G88V P222R S223A S224Q G225E ...     877/954
(91 %)
28 diff
(97.1 %id)
TI_45215433   .b 169 to 1028 140 to 1006 M189D N190E R191P K192G S193N ...     867/1008
(86 %)
24 diff
(97.7 %id)
BI603285 brain, hypothalamus .b 170 to 1048 6 to 874 I228N Q229P R236K T237D E238G ...     869/892
(97 %)
18 diff
(98.0 %id)
BU190996 ductal carcinoma, cell line, Pancreas .b 170 to 1046 31 to 920 N220K R221P P222T S223E S224L ...     890/923
(96 %)
24 diff
(97.4 %id)
BU150084 dorsal root ganglia .b 170 to 981 1 to 827 W202L T203D P204T E206K F207I ...     827/930
(88 %)
29 diff
(96.9 %id)
BU196713 ductal carcinoma, cell line, Pancreas .b 172 to 1021 1 to 857 G218R V231G T232N T233H E234Q ...     857/892
(96 %)
18 diff
(98.0 %id)
BQ879051 ductal carcinoma, cell line, Pancreas .b 172 to 989 1 to 823 E234V     823/856
(96 %)
7 diff
(99.2 %id)
BG709432 brain, hypothalamus .b 173 to 1016 1 to 847 V183G T184Y L185P D186G T187Y ...     847/850
(99 %)
31 diff
(96.4 %id)
BI603216 brain, hypothalamus .b 173 to 1032 1 to 873 G88V P222R S223A S224Q G225E ...     873/873
(100 %)
27 diff
(97.0 %id)
BI603674 brain, hypothalamus .b 173 to 1028 1 to 863 M189D N190E R191P K192G S193N ...     863/865
(99 %)
23 diff
(97.4 %id)
BI670356 brain, hypothalamus .b 173 to 1030 1 to 860 D41A C104G H120R V230G V231G ...     860/861
(99 %)
19 diff
(97.8 %id)
BP195068 brain .b 174 to 755 1 to 582       582/582
(100 %)
0 diff
(100 %id)
TI_44345928   .b 175 to 946 89 to 860 K192N S193I R236K T237D E238G ...     772/860
(89 %)
6 diff
(99.4 %id)
DA366907 subthalamic nucleus .b 176 to 716 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
BE735964 adenocarcinoma, Pancreas .b 176 to 1059 1 to 891 A4V A5G A6G A7C G8R ...     891/1081
(82 %)
37 diff
(96.6 %id)
BQ644927 hepatocellular carcinoma, cell line, Liver .b 176 to 1086 1 to 911 V231G     911/912
(99 %)
17 diff
(98.2 %id)
BX394070.
matches multiple genes
Neuroblastoma Cot 25-normalized .b 178 to 1303 1 to 1117 S51X I52S I53L V54L M56*   also hits gene SNRNP48 1117/1117
(100 %)
17 diff
(98.5 %id)
AL561241 B cells from Burkitt lymphoma .b 178 to 762 1 to 584   fully sequenced,   584/584
(100 %)
5 diff
(99.2 %id)
DB496522 hypothalamus .b 178 to 651 1 to 474       474/474
(100 %)
0 diff
(100 %id)
CR617908 B cells (Ramos cell line) Cot 25-normalized .b 179 to 1472 1 to 1294 exact     1294/1294
(100 %)
0 diff
(100 %id)
DA898405 skeletal muscle .b 179 to 728 16 to 565   capped   550/550
(100 %)
0 diff
(100 %id)
BE312903 brain, neuroblastoma .b 181 to 1002 1 to 830 exact     830/1008
(82 %)
13 diff
(98.8 %id)
BE261182 brain, neuroblastoma .b 182 to 1026 1 to 845 E238G L239S P241Q A242H Y243I ...     845/893
(94 %)
31 diff
(96.6 %id)
BF568386 epithelioid carcinoma cell line, Pancreas .b 182 to 789 1 to 606   fully sequenced,   606/606
(100 %)
2 diff
(99.7 %id)
BI860295 breast, mammary adenocarcinoma, cell line .b 182 to 1011 1 to 833 exact     833/835
(99 %)
6 diff
(99.3 %id)
CA867836 Pancreas, Purified pancreatic islet .b 182 to 808 1 to 627       627/627
(100 %)
2 diff
(99.7 %id)
TI_57190045   .b 182 to 1011 55 to 887 exact     833/835
(99 %)
6 diff
(99.3 %id)
CV029250 mixed .b 187 to 812 1 to 625       625/633
(98 %)
3 diff
(99.6 %id)
BF971542 leiomyosarcoma cell line, uterus .b 190 to 987 1 to 810       810/997
(81 %)
21 diff
(97.9 %id)
BF971916 leiomyosarcoma cell line, uterus .b 190 to 1000 1 to 815       815/1101
(74 %)
28 diff
(97.5 %id)
BU194548 melanotic melanoma, skin .b 192 to 1021 10 to 843       834/880
(94 %)
12 diff
(98.7 %id)
TI_154192832   .b 195 to 1108 50 to 951       902/1030
(87 %)
18 diff
(98.3 %id)
CF127426 Chondrosarcoma Lung Metastasis cell lines, lung .b 196 to 973 1 to 778       778/778
(100 %)
3 diff
(99.7 %id)
BQ070746 brain, neuroblastoma, cell line .b 197 to 1110 1 to 924       924/1004
(92 %)
18 diff
(98.3 %id)
BQ072099 brain, neuroblastoma, cell line .b 197 to 1138 1 to 956       956/1041
(91 %)
21 diff
(98.0 %id)
DA301651 hippocampus .b 208 to 753 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
BE729381 melanotic melanoma, skin .b 213 to 892 1 to 683       683/916
(74 %)
12 diff
(98.7 %id)
CA942431 Pancreas, Purified pancreatic islet .b 230 to 675 1 to 446       446/446
(100 %)
0 diff
(100 %id)
CR591242 HeLa cells Cot 25-normalized .b 234 to 1496 1 to 1263       1263/1263
(100 %)
0 diff
(100 %id)
AL556877 placenta .b 234 to 762 1 to 528   fully sequenced,   528/528
(100 %)
1 diff
(99.9 %id)
BI027997 marrow .b 283 to 641 1 to 359       359/359
(100 %)
0 diff
(100 %id)
TI_154034127   .b 291 to 1127 926 to 90   AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 837/948
(88 %)
7 diff
(99.3 %id)
CA443385 Fibrosarcoma .b 331 to 1127 815 to 19   AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 797/797
(100 %)
3 diff
(99.7 %id)
DT215600 brain .b 340 to 1024 1 to 685       685/685
(100 %)
0 diff
(100 %id)
AI144281 brain, glioblastoma (pooled) .b 389 to 1131 763 to 21   AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 743/743
(100 %)
6 diff
(99.2 %id)
BM710175 eye, optic nerve .b 448 to 653 1 to 206   fully sequenced, Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 206/206
(100 %)
0 diff
(100 %id)
DT220870 brain .b 467 to 1256 1 to 790       790/790
(100 %)
2 diff
(99.8 %id)
BM687554 eye, eye anterior segment .b 491 to 974 10 to 492   fully sequenced,   483/492
(98 %)
7 diff
(98.6 %id)
BU196156 hepatocellular carcinoma, cell line, Liver .b 512 to 1382 1 to 871   AAA   871/871
(100 %)
0 diff
(100 %id)
BQ643721 hepatocellular carcinoma, cell line, Liver .b 512 to 1321 1 to 829       829/894
(92 %)
27 diff
(97.0 %id)
BQ654156 hepatocellular carcinoma, cell line, Liver .b 512 to 1383 1 to 872   AAA   872/872
(100 %)
14 diff
(98.4 %id)
BM696450 eye, lens .b 524 to 1142 1 to 619   fully sequenced,   619/619
(100 %)
1 diff
(99.9 %id)
BM010961 brain, neuroblastoma, cell line .b 538 to 1386 1 to 851       851/926
(91 %)
28 diff
(97.0 %id)
TI_59379850   .b 539 to 1386 96 to 945       850/925
(91 %)
27 diff
(97.1 %id)
TI_158436173   .b 539 to 1382 944 to 114   AAA   833/1082
(76 %)
25 diff
(97.7 %id)
BM512426 insulinoma, Pancreas .b 556 to 1127 585 to 14   fully sequenced, AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 572/572
(100 %)
0 diff
(100 %id)
BE744629 adenocarcinoma cell line, ovary .b 570 to 1354 1 to 776       776/953
(81 %)
18 diff
(98.2 %id)
BX403098 Neuroblastoma Cot 10-normalized .b 574 to 1374 804 to 1       804/804
(100 %)
6 diff
(99.3 %id)
DT219216 brain .b 591 to 1049 12 to 470       459/459
(100 %)
0 diff
(100 %id)
AL562705 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .b 592 to 1328 739 to 1   fully sequenced,   739/739
(100 %)
3 diff
(99.6 %id)
BM671599 eye, optic nerve .b 592 to 1107 530 to 15   fully sequenced, AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 516/516
(100 %)
0 diff
(100 %id)
BU931417 ovary, teratocarcinoma, cell line .b 609 to 1382 1 to 777   AAA   777/777
(100 %)
7 diff
(99.1 %id)
BE898155 melanotic melanoma, skin .b 615 to 1391 1 to 772       772/829
(93 %)
26 diff
(96.9 %id)
BU553814 ovary, teratocarcinoma, cell line .b 619 to 1383 43 to 806   AAA   764/806
(94 %)
25 diff
(96.9 %id)
TI_149313553   .b 623 to 1525 982 to 88   AAA   895/985
(90 %)
20 diff
(98.0 %id)
BM797202 Ascites, stomach .b 687 to 1110 1 to 424       424/424
(100 %)
0 diff
(100 %id)
AL582524 B cells from Burkitt lymphoma .b 701 to 1472 770 to 1   fully sequenced,   770/770
(100 %)
5 diff
(99.4 %id)
AL556843 placenta .b 703 to 1491 797 to 6   fully sequenced,   790/795
(99 %)
2 diff
(99.8 %id)
CA307708 Alveolar Macrophage, lung .b 749 to 1525 794 to 19   AAA   776/776
(100 %)
5 diff
(99.4 %id)
AI142541 brain, glioblastoma (pooled) .b 751 to 1526 770 to 1       770/779
(98 %)
27 diff
(96.6 %id)
CB305443 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 751 to 1525 792 to 19   AAA   774/774
(100 %)
8 diff
(99.0 %id)
BF569161 epithelioid carcinoma cell line, Pancreas .b 759 to 1342 590 to 7   fully sequenced,   584/590
(98 %)
0 diff
(100 %id)
BI711287 insulinoma, Pancreas .b 779 to 1382 633 to 30   AAA   604/605
(99 %)
4 diff
(99.4 %id)
BM876297 insulinoma, Pancreas .b 787 to 1368 602 to 21   AAA   582/582
(100 %)
4 diff
(99.4 %id)
TI_154057189   .b 815 to 1652 922 to 93   AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 830/984
(84 %)
13 diff
(98.7 %id)
TI_159723752   .b 815 to 1652 908 to 79   AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 830/975
(85 %)
15 diff
(98.5 %id)
BF967672 brain, hypothalamus .b 817 to 1592 787 to 13   fully sequenced,   775/787
(98 %)
6 diff
(99.3 %id)
BQ278652 adenocarcinoma, cell line, breast .b 820 to 1657 1 to 838       838/840
(99 %)
14 diff
(98.4 %id)
BU857792 adenocarcinoma, cell line, breast .b 820 to 1663 1 to 850       850/922
(92 %)
23 diff
(97.6 %id)
BU857949 adenocarcinoma, cell line, breast .b 820 to 1663 1 to 852       852/908
(93 %)
19 diff
(98.0 %id)
BU859905 adenocarcinoma, cell line, breast .b 820 to 1663 1 to 849       849/908
(93 %)
19 diff
(98.0 %id)
AU310815 neuroblastoma .b 845 to 1382 538 to 1       538/538
(100 %)
2 diff
(99.7 %id)
BE622858 melanotic melanoma, skin .b 860 to 1602 748 to 1       748/752
(99 %)
14 diff
(98.2 %id)
DB570277 hypothalamus .b 863 to 1382 1 to 520     Submitted on the opposite strand 520/520
(100 %)
0 diff
(100 %id)
BU626857 Alveolar Macrophage, lung .b 902 to 1652 766 to 17   AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 750/750
(100 %)
7 diff
(99.1 %id)
CR595211 Neuroblastoma Cot 25-normalized .b 934 to 1386 1 to 453       453/453
(100 %)
0 diff
(100 %id)
BU727827 eye, eye anterior segment .b 953 to 1378 442 to 17   fully sequenced, AAA   426/426
(100 %)
0 diff
(100 %id)
AI312600 lung .b 1038 to 1527 490 to 1       490/490
(100 %)
0 diff
(100 %id)
CA868592 Pancreas, Purified pancreatic islet .b 1072 to 1655 584 to 1       584/584
(100 %)
0 diff
(100 %id)
DB566284 hypothalamus .b 1075 to 1525 1 to 451   AAA Submitted on the opposite strand 451/451
(100 %)
0 diff
(100 %id)
CA950829 Pancreas, Purified pancreatic islet .b 1088 to 1654 566 to 1       566/566
(100 %)
9 diff
(98.5 %id)
BU735075 eye, lens .b 1112 to 1525 432 to 19   fully sequenced, AAA   414/414
(100 %)
1 diff
(99.8 %id)
DB544963 hippocampus .b 1158 to 1655 1 to 498     Submitted on the opposite strand 498/498
(100 %)
0 diff
(100 %id)
AI914529 pooled .b 1162 to 1376 237 to 23   AAA   215/215
(100 %)
0 diff
(100 %id)
DB540675 hippocampus .b 1165 to 1655 1 to 491     Submitted on the opposite strand 491/491
(100 %)
0 diff
(100 %id)
AA488323   .b 1166 to 1652 505 to 19   AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 487/487
(100 %)
0 diff
(100 %id)
DB575632 hypothalamus .b 1167 to 1655 1 to 489     Submitted on the opposite strand 489/489
(100 %)
0 diff
(100 %id)
DB574119 hypothalamus .b 1168 to 1652 1 to 485     Submitted on the opposite strand 485/485
(100 %)
0 diff
(100 %id)
DB572441 hypothalamus .b 1169 to 1655 1 to 487     Submitted on the opposite strand 487/487
(100 %)
0 diff
(100 %id)
DB566117 hypothalamus .b 1184 to 1652 1 to 469     Submitted on the opposite strand 469/469
(100 %)
0 diff
(100 %id)
DB567544 hypothalamus .b 1184 to 1655 1 to 472     Submitted on the opposite strand 472/472
(100 %)
0 diff
(100 %id)
DB575388 hypothalamus .b 1184 to 1652 1 to 469     Submitted on the opposite strand 469/469
(100 %)
0 diff
(100 %id)
DB543578 hippocampus .b 1185 to 1655 1 to 471     Submitted on the opposite strand 471/471
(100 %)
0 diff
(100 %id)
EB387060 eye, optic nerve .b 1189 to 1525 1 to 337   AAA   337/337
(100 %)
0 diff
(100 %id)
DB567380 hypothalamus .b 1196 to 1652 1 to 457     Submitted on the opposite strand 457/457
(100 %)
0 diff
(100 %id)
DB566605 hypothalamus .b 1198 to 1652 1 to 455     Submitted on the opposite strand 455/455
(100 %)
0 diff
(100 %id)
DB545127 hippocampus .b 1206 to 1655 1 to 450     Submitted on the opposite strand 450/450
(100 %)
0 diff
(100 %id)
DB547429 hippocampus .b 1208 to 1652 1 to 445     Submitted on the opposite strand 445/445
(100 %)
0 diff
(100 %id)
DB546209 hippocampus .b 1212 to 1658 1 to 447     Submitted on the opposite strand 447/447
(100 %)
0 diff
(100 %id)
DB547667 hippocampus .b 1215 to 1655 1 to 441     Submitted on the opposite strand 441/441
(100 %)
0 diff
(100 %id)
DB544689 hippocampus .b 1221 to 1652 1 to 432     Submitted on the opposite strand 432/432
(100 %)
0 diff
(100 %id)
DB530518 hippocampus .b 1225 to 1652 1 to 428     Submitted on the opposite strand 428/428
(100 %)
0 diff
(100 %id)
BM806305 melanotic melanoma, skin .b 1286 to 2192 1 to 913   tiling clone,   913/1062
(85 %)
56 diff
(94.8 %id)
DB551649 hippocampus .b 1431 to 1655 1 to 225     Submitted on the opposite strand 225/225
(100 %)
0 diff
(100 %id)
FN077295 breast carcinoma .b 1433 to 1495 1 to 63       63/63
(100 %)
0 diff
(100 %id)
CV809119 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 1705 to 2550 1 to 856   tiling clone,   856/897
(95 %)
29 diff
(96.8 %id)
DA144146 amygdala .b 2467 to 3030 2 to 565   tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
DN993997 brain, whole brain .b 2489 to 3196 1 to 708       708/708
(100 %)
9 diff
(98.8 %id)
DA351799 substantia nigra .b 2698 to 3242 2 to 547   tiling clone, capped   546/546
(100 %)
1 diff
(99.9 %id)
BX508281   .b 2962 to 3535 1 to 573   tiling clone,   573/573
(100 %)
6 diff
(99.0 %id)
AK095167 substantia nigra .b 3090 to 5017 1 to 1926   tiling clone, available from FLJ,   1926/1926
(100 %)
6 diff
(99.7 %id)
DA350777 substantia nigra .b 3091 to 3516 2 to 426   capped   425/425
(100 %)
3 diff
(99.3 %id)
BM700777 eye, human retina .b 3262 to 3490 8 to 236   fully sequenced, Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 229/236
(97 %)
6 diff
(97.5 %id)
CA311937 Human Lung Epithelial cells, lung .b 3268 to 3788 536 to 17   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 520/571
(91 %)
0 diff
(100 %id)
TI_149304317   .b 3271 to 3786 637 to 119       519/1026
(50 %)
0 diff
(100 %id)
BU685264 lung, Primary Lung Epithelial Cells .b 3271 to 3786 539 to 21       519/569
(91 %)
0 diff
(100 %id)
TI_149275164   .b 3274 to 3788 628 to 111   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 518/828
(62 %)
0 diff
(100 %id)
TI_149280947   .b 3275 to 3785 541 to 30     Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 512/709
(72 %)
0 diff
(100 %id)
BU676589 lung, Primary Lung Epithelial Cells .b 3377 to 3788 428 to 17   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 412/428
(96 %)
0 diff
(100 %id)
BM672155 eye, human retina .b 3460 to 3792 345 to 13   fully sequenced, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 333/345
(96 %)
8 diff
(97.7 %id)
CA950069 Pancreas, Purified pancreatic islet .b 3504 to 4014 1 to 511   tiling clone, fully sequenced,   511/511
(100 %)
0 diff
(100 %id)
AI640297 Kidney .b 3542 to 3787 262 to 17   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 246/262
(93 %)
0 diff
(100 %id)
DA260865 caudate nucleus .b 3971 to 4536 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
BG034901 adenocarcinoma, cell line, Liver .b 3978 to 4781 1 to 815   tiling clone,   815/958
(85 %)
43 diff
(95.6 %id)
CA943866 Pancreas, Purified pancreatic islet .b 3984 to 4347 364 to 1   fully sequenced,   364/364
(100 %)
0 diff
(100 %id)
AW948558 prostate_normal .b 3998 to 4199 207 to 5     Submitted on the opposite strand 203/220
(92 %)
0 diff
(100 %id)
BP389542 pancreatic islet .b 4153 to 4652 500 to 1       500/500
(100 %)
3 diff
(99.4 %id)
BE896473 melanotic melanoma, skin .b 4284 to 5013 1 to 721       721/724
(99 %)
18 diff
(97.6 %id)
CR737106 Prostate .b 4301 to 4688 1 to 389       389/389
(100 %)
6 diff
(98.5 %id)
AL119447 amygdala .b 4320 to 4646 1 to 327       327/334
(97 %)
3 diff
(99.2 %id)
DB310354 substantia nigra .b 4485 to 5017 533 to 1       533/533
(100 %)
1 diff
(99.9 %id)
BF447859 carcinoid, lung .b 4492 to 5020 534 to 6       529/534
(99 %)
0 diff
(100 %id)
BU740661 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 4495 to 5017 540 to 19   AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 522/531
(98 %)
1 diff
(99.9 %id)
DB539861 hippocampus .b 4540 to 5017 1 to 479     Submitted on the opposite strand 479/479
(100 %)
26 diff
(94.6 %id)
AI685752 Prostate .b 4544 to 5018 484 to 9       476/484
(98 %)
0 diff
(100 %id)
DB564713 hypothalamus .b 4560 to 5017 1 to 458     Submitted on the opposite strand 458/458
(100 %)
1 diff
(99.8 %id)
DB549142 hippocampus .b 4563 to 5017 1 to 455     Submitted on the opposite strand 455/455
(100 %)
1 diff
(99.8 %id)
DB570106 hypothalamus .b 4636 to 5017 1 to 383     Submitted on the opposite strand 383/383
(100 %)
9 diff
(97.7 %id)
AI762404 Kidney .b 4857 to 5018 169 to 8       162/169
(95 %)
0 diff
(100 %id)
BI821323 pooled brain, lung, testis .c 1 to 836 1 to 841 G16A A17L L18W G19V S20L ... tiling clone,   841/891
(94 %)
18 diff
(98.0 %id)
TI_57200472   .c 1 to 836 37 to 877 G16A A17L L18W G19V S20L ...     841/927
(90 %)
17 diff
(98.2 %id)
W88980 liver and spleen .c 609 to 1010 403 to 1   tiling clone,   403/403
(100 %)
5 diff
(98.8 %id)
AW450634   .c 669 to 1025 359 to 3   tiling clone,   357/360
(99 %)
0 diff
(100 %id)
CR743021 Kidney .c 679 to 1010 1 to 332   AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 332/332
(100 %)
0 diff
(100 %id)
AI081537 Kidney .c 711 to 1016 306 to 1       306/306
(100 %)
0 diff
(100 %id)
BE465200 Kidney .c 711 to 1007 300 to 4       297/300
(99 %)
0 diff
(100 %id)
AA348581 brain, hippocampus .c 783 to 1057 1 to 274       274/274
(100 %)
4 diff
(98.6 %id)
AA304741 Bone .c 792 to 1012 1 to 221       221/221
(100 %)
1 diff
(99.6 %id)
AW963312   .c 797 to 1438 1 to 641       641/641
(100 %)
31 diff
(95.2 %id)
CK004585 brain/CNS, Human Brain - Frontal Cortex .c 879 to 1512 1 to 634   tiling clone,   634/635
(99 %)
2 diff
(99.7 %id)
AA844132 parathyroid gland, parathyroid tumor .c 1010 to 1411 414 to 13   AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 402/403
(99 %)
2 diff
(99.6 %id)
DB571296 hypothalamus .c 1178 to 1642 1 to 465   tiling clone, AAA Submitted on the opposite strand 465/465
(100 %)
0 diff
(100 %id)
DB495074 hypothalamus .d 1 to 492 1 to 492   tiling clone,   492/492
(100 %)
4 diff
(99.2 %id)
CB119766 Liver .d 248 to 766 1 to 519   tiling clone,   519/519
(100 %)
3 diff
(99.5 %id)
BF689810 melanotic melanoma, high MDR (cell line), skin .d 315 to 746 34 to 465   tiling clone, fully sequenced,   432/465
(92 %)
7 diff
(98.5 %id)
BG767393 melanotic melanoma, high MDR (cell line), skin .d 315 to 1144 34 to 872   tiling clone,   839/878
(95 %)
34 diff
(96.2 %id)
BF690198 melanotic melanoma, high MDR (cell line), skin .d 685 to 1188 505 to 3   tiling clone, fully sequenced,   503/505
(99 %)
0 diff
(100 %id)
BM760507 lymph node, stomach .e 1 to 315 1 to 315       315/315
(100 %)
0 diff
(100 %id)
BM762805 lymph node, stomach .e 1 to 648 1 to 648 exact tiling clone,   648/648
(100 %)
0 diff
(100 %id)
BM838736 lymph node, stomach .e 1 to 509 1 to 509       509/509
(100 %)
5 diff
(99.1 %id)
BM844165 lymph node, stomach .e 19 to 341 1 to 322       322/322
(100 %)
1 diff
(99.7 %id)
DB498221 hypothalamus .e 29 to 520 1 to 492       492/492
(100 %)
1 diff
(99.8 %id)
DB506647 hypothalamus .e 29 to 510 1 to 482       482/484
(99 %)
2 diff
(99.6 %id)
BG715928 brain, hypothalamus .e 140 to 908 1 to 769   tiling clone,   769/769
(100 %)
9 diff
(98.9 %id)
BM172310 brain, hypothalamus .e 140 to 852 1 to 714       714/714
(100 %)
13 diff
(98.2 %id)
DB471138 hippocampus .e 145 to 526 1 to 381       381/412
(92 %)
29 diff
(93.0 %id)
BM449963 melanotic melanoma, skin .e 155 to 930 1 to 784   tiling clone,   784/826
(94 %)
15 diff
(98.2 %id)
BI545371 brain, hippocampus .f 1 to 573 6 to 585 K79E tiling clone,   580/619
(93 %)
9 diff
(98.6 %id)
TI_44165448   .f 1 to 573 136 to 715 K79E     580/749
(77 %)
9 diff
(98.8 %id)
CN413943 embryonic stem cells, DMSO-treated H9 cellline .g 1 to 486 1 to 486 exact tiling clone,   486/486
(100 %)
3 diff
(99.4 %id)
CD514662 White Matter .h 1 to 857 1 to 860 exact tiling clone,   860/977
(88 %)
12 diff
(98.8 %id)
BQ671315 epidermoid carcinoma, cell line, salivary gland .h 13 to 934 12 to 941 exact     930/1009
(92 %)
34 diff
(96.7 %id)
BQ877852 epidermoid carcinoma, cell line, salivary gland .h 15 to 968 26 to 984 exact     959/1005
(95 %)
31 diff
(97.0 %id)
BU162546 melanotic melanoma, cell line, skin .h 26 to 885 1 to 868 exact     868/868
(100 %)
12 diff
(98.7 %id)
BU158225 epidermoid carcinoma, cell line, salivary gland .h 26 to 923 1 to 898 exact     898/898
(100 %)
6 diff
(99.4 %id)
CB216103 normal endometrium, mid-secretory phase,cycle day 23, uterus .h 31 to 632 1 to 602 exact     602/602
(100 %)
1 diff
(99.9 %id)
CR602964 HeLa cells Cot 25-normalized .h 34 to 1407 1 to 1374 exact tiling clone,   1374/1374
(100 %)
0 diff
(100 %id)
CN484303 eye .h 55 to 651 1 to 597       597/597
(100 %)
1 diff
(99.9 %id)
BE622250 melanotic melanoma, skin .h 55 to 793 1 to 746       746/969
(76 %)
23 diff
(97.7 %id)
AW370786 breast .h 188 to 805 11 to 628       618/628
(98 %)
4 diff
(99.4 %id)
BE062800 breast .h 247 to 783 29 to 565       537/565
(95 %)
10 diff
(98.3 %id)
TI_154038667   .h 366 to 1131 850 to 85   AAA   766/973
(78 %)
8 diff
(99.2 %id)
CA444791 lung, Metastatic Chondrosarcoma .h 414 to 1131 734 to 17   AAA   718/718
(100 %)
3 diff
(99.6 %id)
AK296622 colon .i 1 to 1188 2 to 1189 exact tiling clone,   1189/1189
(100 %)
3 diff
(99.8 %id)
DC344969 colon .i 1 to 513 2 to 514 exact     514/514
(100 %)
2 diff
(99.7 %id)
DB464325 hippocampus .i 1 to 453 2 to 455       455/457
(99 %)
10 diff
(97.9 %id)
DB502212 hypothalamus .i 1 to 474 2 to 475       475/475
(100 %)
2 diff
(99.6 %id)
AU099185   .i 1 to 299 2 to 300   tiling clone,   300/300
(100 %)
0 diff
(100 %id)
DB502630 hypothalamus .i 4 to 471 1 to 469       469/469
(100 %)
0 diff
(100 %id)
DB504700 hypothalamus .i 4 to 472 1 to 469       469/473
(99 %)
3 diff
(99.4 %id)
DB456247 testis .i 9 to 471 1 to 463       463/463
(100 %)
0 diff
(100 %id)
DB491251 hypothalamus .i 9 to 425 1 to 417       417/417
(100 %)
0 diff
(100 %id)
CN413945 embryonic stem cells, DMSO-treated H9 cellline .i 16 to 531 1 to 516 exact     516/516
(100 %)
1 diff
(99.9 %id)
TI_45210447   .i 24 to 410 128 to 517       390/1086
(35 %)
10 diff
(99.1 %id)
DC303016 cerebellum .i 27 to 598 1 to 573 exact     573/573
(100 %)
2 diff
(99.7 %id)
DB502940 hypothalamus .i 27 to 431 1 to 406       406/406
(100 %)
2 diff
(99.6 %id)
CN413944 embryonic stem cells, DMSO-treated H9 cellline .i 60 to 414 1 to 355       355/355
(100 %)
0 diff
(100 %id)
BQ339904 nervous_normal .i 104 to 373 278 to 7       272/278
(97 %)
0 diff
(100 %id)
FN047829 breast carcinoma .i 407 to 474 82 to 13     Submitted on the opposite strand 70/83
(84 %)
0 diff
(100 %id)
N93911 multiple sclerosis lesions .i 668 to 1147 1 to 482       482/482
(100 %)
8 diff
(98.4 %id)
BX095283 multiple sclerosis lesions .i 670 to 1354 1 to 685   tiling clone,   685/685
(100 %)
2 diff
(99.8 %id)
BU101788   .i 960 to 1244 284 to 1       284/293
(96 %)
1 diff
(99.7 %id)
BU101787   .i 996 to 1279 1 to 285       285/287
(99 %)
4 diff
(98.7 %id)
N62797 multiple sclerosis lesions .i 1211 to 1787 579 to 1   tiling clone,   579/582
(99 %)
9 diff
(98.5 %id)
AA844763 Pancreas .i 1512 to 1789 279 to 3   tiling clone,   277/279
(99 %)
0 diff
(100 %id)
DA317426 hippocampus .j-u 1 to 551 2 to 551 G60A S61V L62* tiling clone, capped   550/550
(100 %)
1 diff
(99.9 %id)
DA387810 thalamus .j-u 28 to 595 2 to 569 A52G V54R W55V N56E A58G tiling clone, capped   568/568
(100 %)
2 diff
(99.7 %id)
DA239765 brain .k 1 to 497 2 to 498 V67A tiling clone, capped   497/497
(100 %)
1 diff
(99.8 %id)
DA311939 hippocampus .k 1 to 532 2 to 534 V40X D41* capped   533/534
(99 %)
2 diff
(99.7 %id)
DA322647 hippocampus .k 5 to 558 2 to 555 exact capped   554/554
(100 %)
0 diff
(100 %id)
DA102349 cerebellum .k 28 to 610 2 to 584 exact tiling clone, capped   583/583
(100 %)
0 diff
(100 %id)
DA236037 brain .k 29 to 607 2 to 580 A110V capped   579/579
(100 %)
1 diff
(99.9 %id)
DA412847 thalamus .k 448 to 987 2 to 541   tiling clone, capped   540/540
(100 %)
2 diff
(99.7 %id)
DB312649 thalamus .k 1682 to 2245 564 to 1   tiling clone,   564/564
(100 %)
8 diff
(98.6 %id)
DB485968 hypothalamus .l 1 to 423 1 to 422 S77Y K104N K118N D122H G126A ... tiling clone,   422/422
(100 %)
7 diff
(98.4 %id)
DB491207 hypothalamus .l 1 to 340 1 to 340   tiling clone,   340/340
(100 %)
0 diff
(100 %id)
BM918601 pooled pancreas and spleen .m 1 to 926 16 to 949 G119X E132G L133T T134H A136S ... tiling clone,   934/1076
(86 %)
23 diff
(97.9 %id)
TI_57215087   .n 1 to 787 36 to 830 M113I P114A E115*     803/831
(96 %)
12 diff
(98.6 %id)
TI_57215161   .n 1 to 761 33 to 792 A94Q A95P A96P I97S A98L ...     768/793
(96 %)
3 diff
(99.7 %id)
BI752064 brain .n 1 to 787 3 to 796 M113I P114A E115* tiling clone,   796/797
(99 %)
16 diff
(98.0 %id)
BI752209 brain .n 1 to 761 2 to 761 A94Q A95P A96P I97S A98L ... tiling clone,   761/762
(99 %)
4 diff
(99.5 %id)
BU623185 cell lines, Chondrosarcoma .o 1 to 559 577 to 19 A21P T44I A52V A70V A105V ... tiling clone, AAA   559/564
(99 %)
19 diff
(96.7 %id)
DC399401 testis .p 1 to 564 1 to 564 exact tiling clone,   564/564
(100 %)
6 diff
(99.0 %id)
EB385754 eye, optic nerve .p 280 to 1073 1 to 794   tiling clone,   794/794
(100 %)
1 diff
(99.9 %id)
AK124952 subthalamic nucleus .p 499 to 2731 1 to 2233   tiling clone, available from FLJ,   2233/2233
(100 %)
4 diff
(99.9 %id)
DA364752 subthalamic nucleus .p 500 to 1070 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
AW886683 ovary .p 644 to 1056 19 to 429       411/430
(95 %)
7 diff
(98.4 %id)
FN145894 breast carcinoma .p 984 to 1088 111 to 1     Submitted on the opposite strand 111/115
(96 %)
6 diff
(94.8 %id)
TI_45211851   .q 1 to 738 93 to 831 A14T K24E V25G D26G A27C ... tiling clone, AAA   739/907
(81 %)
21 diff
(97.7 %id)
BI199687 brain, neuroblastoma .r 1 to 797 7 to 797 exact tiling clone,   797/798
(99 %)
20 diff
(97.5 %id)
EL954952 eyeball .s 62 to 536 78 to 552 G5A A6L L7W G8V S9L ... tiling clone,   549/552
(99 %)
7 diff
(98.8 %id)
DA281121 corpus callosum .t 1 to 583 2 to 584 exact tiling clone, capped   583/583
(100 %)
1 diff
(99.9 %id)
BI457986 brain, hypothalamus .u 1 to 786 1 to 788 exact tiling clone,   788/788
(100 %)
9 diff
(98.9 %id)
TI_57241374   .va-u 1 to 727 15 to 739 exact tiling clone,   725/757
(95 %)
38 diff
(95.0 %id)
BI913617 brain .va-u 5 to 727 1 to 720 exact tiling clone, available from MGC,   720/738
(97 %)
37 diff
(95.0 %id)
BU633587 cell lines, Chondrosarcoma .vb-u 1 to 704 721 to 19 exact tiling clone, AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 703/703
(100 %)
1 diff
(99.9 %id)
DA292642 hippocampus .vc-u 1 to 564 2 to 565 exact tiling clone, capped   564/564
(100 %)
2 diff
(99.7 %id)
315 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j-u, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t, .u, .va-u, .vb-u, .vc-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI