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Gene PTGS1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
259 supporting clones for gene PTGS1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_000962.2   .a 1 to 5091 3 to 5093 exact RefSeq,   5093/5093
(100 %)
0 diff
(100 %id)
BC029840 Brain, Lung, Testis, adult, pooled whole .a 82 to 2690 1 to 2608 W8R tiling clone, available from MGC, AAA   2608/2608
(100 %)
2 diff
(100.0 %id)
AK290022 hippocampus .a 101 to 1985 1 to 1885 W8R     1885/1885
(100 %)
1 diff
(100.0 %id)
M59979   .a 129 to 2679 1 to 2552 W8R tiling clone,   2552/2554
(99 %)
3 diff
(99.9 %id)
S36271   .a 134 to 2567 1 to 2435 W8R     2435/2435
(100 %)
3 diff
(99.9 %id)
S78220   .a 134 to 1945 1 to 1812 W8R     1812/1812
(100 %)
1 diff
(100.0 %id)
CB216527 normal endometrium, mid-secretory phase,cycle day 23, uterus .a 815 to 1452 1 to 638       638/638
(100 %)
0 diff
(100 %id)
CO247972 Chondrosarcoma Lung Metastasis cell lines, lung .a 854 to 1567 1 to 708       708/824
(85 %)
16 diff
(98.1 %id)
BE047701 brain, tumor, 5 pooled (see description) .a 863 to 1516 1 to 653       653/658
(99 %)
25 diff
(96.3 %id)
BX370407   .a 923 to 1684 1 to 762       762/804
(94 %)
24 diff
(97.1 %id)
BY996898   .a 1034 to 1703 10 to 679       670/679
(98 %)
6 diff
(99.2 %id)
CD609927   .a 1164 to 1915 1 to 749       749/765
(97 %)
11 diff
(98.6 %id)
CD609924   .a 1171 to 1915 760 to 17       744/774
(96 %)
1 diff
(99.9 %id)
AV734203 pheochromocytoma .a 1234 to 1647 1 to 409       409/409
(100 %)
3 diff
(99.3 %id)
CD609926   .a 1276 to 1915 655 to 17       639/655
(97 %)
0 diff
(100 %id)
DB225572 trachea .a 1353 to 1914 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
BM728404 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1394 to 1944 1 to 551       551/551
(100 %)
0 diff
(100 %id)
AI863410 brain, tumor, 5 pooled (see description) .a 2290 to 2690 414 to 14   AAA   401/401
(100 %)
0 diff
(100 %id)
CD014050   .b 1 to 2130 4 to 2132 exact tiling clone,   2132/2132
(100 %)
4 diff
(99.9 %id)
DA881117   .b 13 to 570 2 to 559   tiling clone, capped   558/558
(100 %)
1 diff
(99.9 %id)
NM_080591.1   .c 1 to 4980 3 to 4982 exact RefSeq,   4982/4982
(100 %)
0 diff
(100 %id)
DA392280 thalamus .c 55 to 649 2 to 596   tiling clone, capped   595/595
(100 %)
1 diff
(99.9 %id)
DA933405 Spleen .c 59 to 557 2 to 500   capped   499/499
(100 %)
2 diff
(99.6 %id)
AL589383 human spinal cord .c 63 to 518 20 to 475       456/475
(96 %)
8 diff
(98.4 %id)
DA945721 Spleen .c 64 to 623 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA945742 Spleen .c 64 to 624 2 to 563   capped   562/562
(100 %)
5 diff
(99.2 %id)
DA472053   .c 67 to 825 2 to 763   capped   762/784
(97 %)
13 diff
(98.4 %id)
CD684371 normal nasopharynx .c 70 to 367 6 to 305       300/305
(98 %)
12 diff
(96.1 %id)
DA398129 thalamus .c 72 to 636 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA474981   .c 72 to 635 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
AL708542 human skeletal muscle .c 73 to 408 1 to 336       336/336
(100 %)
2 diff
(99.5 %id)
DA159849 amygdala .c 74 to 652 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
DA165273 amygdala .c 74 to 646 2 to 572   capped   571/573
(99 %)
7 diff
(98.8 %id)
DA259132 caudate nucleus .c 74 to 647 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA268360 caudate nucleus .c 74 to 613 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
DA303883 hippocampus .c 74 to 624 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
DA311985 hippocampus .c 74 to 621 2 to 550   capped   549/549
(100 %)
2 diff
(99.7 %id)
DA322923 hippocampus .c 74 to 577 2 to 503   capped   502/502
(100 %)
5 diff
(99.1 %id)
DA323982 hippocampus .c 74 to 637 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA338486 hippocampus .c 74 to 653 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
DA395028 thalamus .c 74 to 660 2 to 588   capped   587/587
(100 %)
1 diff
(99.9 %id)
DA475220   .c 74 to 623 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA475960   .c 74 to 647 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
DA544856   .c 74 to 625 2 to 554   capped   553/553
(100 %)
3 diff
(99.5 %id)
DA547184   .c 74 to 637 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA760317   .c 74 to 450 2 to 378   capped   377/382
(98 %)
4 diff
(99.0 %id)
DA969978 stomach .c 74 to 644 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
DB014286 esophageal, tumor tissue .c 74 to 633 2 to 562   capped   561/569
(98 %)
4 diff
(99.3 %id)
DB178110 kidney, tumor tissue .c 74 to 645 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DB210861 trachea .c 74 to 672 2 to 601   capped   600/600
(100 %)
3 diff
(99.5 %id)
CO403301 Chondrosarcoma Lung Metastasis cell lines, lung .c 75 to 770 1 to 687       687/843
(81 %)
15 diff
(98.3 %id)
BI824788 pooled brain, lung, testis .c 82 to 1046 1 to 952       952/996
(95 %)
31 diff
(96.9 %id)
BI824714 pooled brain, lung, testis .c 82 to 839 1 to 758       758/758
(100 %)
13 diff
(98.3 %id)
TI_57196884   .c 82 to 1046 36 to 987       952/1031
(92 %)
37 diff
(96.5 %id)
TI_57197041   .c 82 to 839 68 to 825       758/825
(91 %)
19 diff
(97.7 %id)
DN999968   .c 82 to 772 1 to 690       690/690
(100 %)
8 diff
(98.9 %id)
DB193941 ovary, tumor tissue .c 89 to 557 16 to 485   capped   470/484
(97 %)
9 diff
(98.2 %id)
DA550056   .c 90 to 676 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA479686   .c 92 to 640 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA927230 small intestine .c 92 to 678 2 to 589   capped   588/588
(100 %)
2 diff
(99.7 %id)
DA872921 Prostate .c 99 to 668 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA624464 Kidney .c 101 to 649 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA332669 hippocampus .c 102 to 695 2 to 595   capped   594/594
(100 %)
1 diff
(99.9 %id)
DA473032   .c 102 to 643 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
DA474007   .c 102 to 662 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA475854   .c 102 to 648 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DA480455   .c 102 to 661 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA543209   .c 102 to 655 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA546209   .c 102 to 671 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
DA548590   .c 102 to 668 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA548593   .c 102 to 663 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
DA550228   .c 102 to 665 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA550451   .c 102 to 666 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DA602941   .c 102 to 657 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA748951   .c 102 to 669 2 to 569   capped   568/569
(99 %)
2 diff
(99.7 %id)
DB048336 testis .c 102 to 653 2 to 554   capped   553/553
(100 %)
2 diff
(99.7 %id)
DB197534 trachea .c 102 to 657 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DC349255   .c 103 to 676 1 to 576       576/576
(100 %)
3 diff
(99.5 %id)
DC400655 testis .c 103 to 662 1 to 562       562/562
(100 %)
3 diff
(99.5 %id)
DA299411 hippocampus .c 104 to 658 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA472532   .c 104 to 274 2 to 173   capped   172/172
(100 %)
2 diff
(98.9 %id)
DA473368   .c 104 to 662 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DA480582   .c 104 to 662 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA544137   .c 104 to 657 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
DA544551   .c 104 to 661 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA545177   .c 104 to 396 2 to 294   capped   293/293
(100 %)
0 diff
(100 %id)
DA545300   .c 104 to 628 2 to 526   capped   525/525
(100 %)
1 diff
(99.9 %id)
DA545963   .c 104 to 521 2 to 420   capped   419/423
(99 %)
5 diff
(98.9 %id)
DA547694   .c 104 to 657 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
DA548391   .c 104 to 657 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA548397   .c 104 to 666 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA548672   .c 104 to 672 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DA549261   .c 104 to 690 2 to 588   tiling clone, capped   587/587
(100 %)
0 diff
(100 %id)
DA619090   .c 104 to 643 2 to 541   capped   540/540
(100 %)
2 diff
(99.7 %id)
DA682458 ovary .c 104 to 660 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA764746 tongue .c 104 to 680 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA867905 Prostate .c 104 to 645 2 to 544   capped   543/543
(100 %)
3 diff
(99.5 %id)
DA871388 Prostate .c 104 to 650 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DA884346   .c 104 to 658 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA967899 stomach .c 104 to 678 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DB110026 thymus .c 104 to 661 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DB193032 ovary, tumor tissue .c 104 to 628 2 to 526   capped   525/525
(100 %)
2 diff
(99.7 %id)
DA474281   .c 105 to 658 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA478043   .c 105 to 661 2 to 558   capped   557/558
(99 %)
2 diff
(99.7 %id)
AL556508 placenta .c 110 to 1117 1 to 999       999/1024
(97 %)
11 diff
(99.0 %id)
CF125034 Chondrosarcoma Lung Metastasis cell lines, lung .c 122 to 684 2 to 564       563/564
(99 %)
7 diff
(98.8 %id)
TI_154186433   .c 122 to 813 50 to 740       691/787
(87 %)
15 diff
(98.1 %id)
S36219   .c 134 to 2456 1 to 2324 W8R tiling clone,   2324/2324
(100 %)
2 diff
(100.0 %id)
AA223896 brain, neuroepithelial cells .c 228 to 324 1 to 97       97/97
(100 %)
4 diff
(95.9 %id)
BM720584 eye, fetal eye .c 484 to 1207 1 to 723       723/723
(100 %)
4 diff
(99.5 %id)
DA536160 heart .c 637 to 1199 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
AU279462   .c 742 to 1292 1 to 551       551/551
(100 %)
0 diff
(100 %id)
BF897075 marrow .c 780 to 1137 382 to 21     Submitted on the opposite strand 360/382
(94 %)
0 diff
(100 %id)
AW383002 head_neck .c 851 to 1259 1 to 411       411/424
(96 %)
9 diff
(97.9 %id)
AW382987 head_neck .c 856 to 1243 390 to 1       390/398
(97 %)
4 diff
(99.0 %id)
BE154548 head_neck .c 856 to 1259 411 to 9     Submitted on the opposite strand 403/419
(96 %)
2 diff
(99.6 %id)
BE154552 head_neck .c 856 to 1250 395 to 2     Submitted on the opposite strand 394/403
(97 %)
1 diff
(99.8 %id)
AW383053 head_neck .c 868 to 1252 1 to 387       387/387
(100 %)
2 diff
(99.5 %id)
AW383809 head_neck .c 914 to 1246 334 to 2       333/334
(99 %)
7 diff
(98.0 %id)
EL594410 epidermis, skin .c 948 to 1393 13 to 459       447/559
(79 %)
13 diff
(97.7 %id)
BE296976 muscle, rhabdomyosarcoma .c 1110 to 1736 1 to 623       623/639
(97 %)
6 diff
(99.1 %id)
BE792730 lung, small cell carcinoma .c 1364 to 1896 1 to 531       531/531
(100 %)
3 diff
(99.5 %id)
BY995557   .c 1366 to 2055 1 to 690       690/690
(100 %)
6 diff
(99.2 %id)
FN166131 breast carcinoma .c 1477 to 1572 94 to 1     Submitted on the opposite strand 94/94
(100 %)
4 diff
(95.8 %id)
R96180 pineal gland .c 1525 to 1879 1 to 355       355/355
(100 %)
3 diff
(99.2 %id)
TI_151770031   .c 1538 to 2110 108 to 688       581/1056
(55 %)
16 diff
(98.5 %id)
AL578750 placenta .c 1568 to 2521 946 to 3       944/977
(96 %)
0 diff
(100 %id)
BG677283 skin, squamous cell carcinoma .c 1603 to 2228 1 to 627       627/774
(81 %)
7 diff
(99.1 %id)
CO403406 Chondrosarcoma Lung Metastasis cell lines, lung .c 1653 to 2292 59 to 697       639/777
(82 %)
24 diff
(97.0 %id)
AA037294 senescent fibroblast .c 1671 to 2128 1 to 466       466/471
(98 %)
11 diff
(97.7 %id)
BQ717908 sympathetic trunk .c 1681 to 2537 1 to 866       866/881
(98 %)
37 diff
(95.9 %id)
N79146 multiple sclerosis lesions .c 1726 to 2208 1 to 503   fully sequenced,   503/503
(100 %)
17 diff
(96.7 %id)
AV700151.
matches multiple genes
hepatocellular carcinoma .c 1766 to 2568 802 to 1     Suspected internal deletion, this clone was ignored, also hits gene CLMN 802/805
(99 %)
33 diff
(96.0 %id)
U63846   .c 1766 to 4145 1 to 2380   tiling clone,   2380/2380
(100 %)
24 diff
(99.0 %id)
AI129475 uterus .c 1776 to 2580 810 to 7       804/810
(99 %)
0 diff
(100 %id)
BU733396 eye, optic nerve .c 1830 to 2579 765 to 19   AAA   747/749
(99 %)
5 diff
(99.4 %id)
AI740976 pooled .c 1836 to 2580 749 to 6       744/749
(99 %)
0 diff
(100 %id)
CA444725 lung, Metastatic Chondrosarcoma .c 1861 to 2579 737 to 19   AAA   719/719
(100 %)
0 diff
(100 %id)
CO246144 Chondrosarcoma Lung Metastasis cell lines, lung .c 1872 to 2499 634 to 8     Submitted on the opposite strand 627/735
(85 %)
0 diff
(100 %id)
CB528933 Aveolar Macrophage, lung .c 1906 to 2579 694 to 19   AAA   676/676
(100 %)
2 diff
(99.8 %id)
AA278216.
matches multiple genes
germinal center B cell .c 1933 to 2412 1 to 475     also hits gene UEVLD 475/482
(98 %)
24 diff
(95.1 %id)
AA669214 lung .c 1958 to 2546 589 to 8       582/589
(98 %)
0 diff
(100 %id)
BU742185 eye, fetal eye .c 1967 to 2579 629 to 19   AAA   611/611
(100 %)
8 diff
(98.7 %id)
BY994500   .c 1974 to 2703 17 to 746       730/746
(97 %)
6 diff
(99.2 %id)
BG960448 colon .c 1979 to 2326 349 to 1       349/349
(100 %)
3 diff
(99.2 %id)
AA706809 liver and spleen .c 2002 to 2580 584 to 6       579/584
(99 %)
0 diff
(100 %id)
BM996688 lung, Metastatic Chondrosarcoma .c 2014 to 2579 585 to 19   AAA   567/567
(100 %)
2 diff
(99.7 %id)
BM990424 lung, Metastatic Chondrosarcoma .c 2040 to 2579 558 to 19   AAA   540/548
(98 %)
0 diff
(100 %id)
W05732 lung .c 2044 to 2569 15 to 545   fully sequenced,   531/545
(97 %)
7 diff
(98.8 %id)
BQ018291 lung, Metastatic Chondrosarcoma .c 2047 to 2579 551 to 19   AAA   533/535
(99 %)
0 diff
(100 %id)
AI467819 pooled .c 2052 to 2573 533 to 12   AAA   522/522
(100 %)
1 diff
(99.9 %id)
AI031637 brain, glioblastoma (pooled) .c 2056 to 2580 527 to 9       519/527
(98 %)
0 diff
(100 %id)
AI269356 Kidney .c 2074 to 2566 493 to 1       493/507
(97 %)
44 diff
(91.4 %id)
AA946807 2 pooled tumors (clear cell type), Kidney .c 2076 to 2580 510 to 7       504/510
(98 %)
0 diff
(100 %id)
BP386373 pancreatic islet .c 2086 to 2580 1 to 495     Submitted on the opposite strand 495/498
(99 %)
1 diff
(99.8 %id)
BF112243 pooled .c 2092 to 2579 499 to 12   AAA   488/488
(100 %)
1 diff
(99.8 %id)
BE767321 nervous_tumor .c 2099 to 2432 339 to 7       333/339
(98 %)
0 diff
(100 %id)
BE767412 nervous_tumor .c 2099 to 2239 241 to 101       141/241
(58 %)
0 diff
(100 %id)
AA454668.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 2104 to 2579 495 to 20   AAA also hits gene C12orf69 476/476
(100 %)
4 diff
(99.2 %id)
BG755650 B-cells, primary B-cells from tonsils (cell line) .c 2109 to 2565 1 to 457       457/460
(99 %)
1 diff
(99.8 %id)
AI288987 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 2117 to 2580 467 to 4       464/467
(99 %)
0 diff
(100 %id)
AA146639   .c 2120 to 2559 449 to 8       442/449
(98 %)
0 diff
(100 %id)
AV744257 cord Blood .c 2140 to 2579 1 to 432   AAA   432/432
(100 %)
9 diff
(98.0 %id)
AA670086 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 2142 to 2574 1 to 433       433/433
(100 %)
1 diff
(99.8 %id)
BE767441 nervous_tumor .c 2147 to 2450 1 to 307       307/313
(98 %)
9 diff
(97.2 %id)
FN047514 breast carcinoma .c 2147 to 2243 1 to 97       97/97
(100 %)
0 diff
(100 %id)
R96181 pineal gland .c 2147 to 2544 403 to 1       403/403
(100 %)
7 diff
(98.3 %id)
BQ014239 Chondrosarcoma, Left Pubic Bone .c 2147 to 2579 451 to 19   AAA   433/435
(99 %)
4 diff
(99.1 %id)
N62377 multiple sclerosis lesions .c 2178 to 2579 403 to 1   fully sequenced,   403/403
(100 %)
1 diff
(99.8 %id)
BF222162 Prostate .c 2182 to 2579 398 to 1       398/509
(78 %)
9 diff
(98.3 %id)
BY994213   .c 2187 to 2857 21 to 691   tiling clone,   671/691
(97 %)
6 diff
(99.2 %id)
DA548383   .c 2190 to 2666 2 to 479   capped   478/478
(100 %)
2 diff
(99.6 %id)
TI_154072807   .c 2190 to 2579 448 to 58   AAA   391/647
(60 %)
8 diff
(98.8 %id)
AI792686.
matches multiple genes
Prostate .c 2195 to 2557 1 to 363     also hits gene ARHGEF37 363/363
(100 %)
1 diff
(99.8 %id)
AA037295 senescent fibroblast .c 2206 to 2563 363 to 1       363/385
(94 %)
0 diff
(100 %id)
BF435898 pooled .c 2214 to 2579 376 to 11   AAA   366/366
(100 %)
3 diff
(99.2 %id)
AI439846 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .c 2217 to 2580 372 to 9       364/375
(97 %)
0 diff
(100 %id)
AW292277   .c 2217 to 2579 380 to 18   AAA   363/369
(98 %)
2 diff
(99.5 %id)
BM679302 eye, fetal eye .c 2221 to 2579 377 to 19   AAA   359/359
(100 %)
0 diff
(100 %id)
AI202433 Prostate .c 2228 to 2570 343 to 1       343/343
(100 %)
0 diff
(100 %id)
BE857710 Prostate .c 2254 to 2580 327 to 1       327/327
(100 %)
2 diff
(99.4 %id)
CF138334 lymph .c 2325 to 2798 8 to 481       474/481
(98 %)
6 diff
(98.8 %id)
TI_154168237   .c 2325 to 2818 81 to 574       494/494
(100 %)
6 diff
(98.8 %id)
N74888 lung .c 2332 to 2579 248 to 1   fully sequenced,   248/248
(100 %)
2 diff
(99.2 %id)
AA223897 brain, neuroepithelial cells .c 2371 to 2566 197 to 1       197/197
(100 %)
3 diff
(98.5 %id)
AI424408 Prostate .c 2381 to 2579 233 to 35   AAA   199/199
(100 %)
7 diff
(96.5 %id)
BY993675   .c 2426 to 3108 13 to 695   tiling clone,   683/695
(98 %)
6 diff
(99.2 %id)
AA278535.
matches multiple genes
germinal center B cell .c 2435 to 2554 143 to 24   AAA also hits gene TXNRD2 120/120
(100 %)
0 diff
(100 %id)
BE612565 adenocarcinoma, ovary .c 2625 to 3371 1 to 742       742/847
(87 %)
20 diff
(97.7 %id)
BX505129   .c 2725 to 3346 1 to 623   tiling clone,   623/623
(100 %)
2 diff
(99.7 %id)
DA877137 Prostate .c 2877 to 3432 2 to 557   tiling clone, capped   556/556
(100 %)
1 diff
(99.9 %id)
CD014048   .d 1 to 1764 3 to 1766 W8R tiling clone,   1766/1766
(100 %)
1 diff
(100.0 %id)
TI_45236518   .d 5 to 700 78 to 783       701/783
(89 %)
35 diff
(95.6 %id)
BI517639 pooled colon, kidney, stomach .d 10 to 580 1 to 575       572/701
(81 %)
24 diff
(96.6 %id)
BI518353 pooled colon, kidney, stomach .d 1806 to 2410 611 to 1   tiling clone,   611/611
(100 %)
17 diff
(97.3 %id)
TI_45236519   .d 1806 to 2410 611 to 1       611/611
(100 %)
17 diff
(97.3 %id)
DA195960 amygdala .e 1 to 570 2 to 571   tiling clone, capped   570/570
(100 %)
1 diff
(99.9 %id)
AK295221 caudate nucleus .e 3 to 2314 1 to 2312 exact tiling clone,   2312/2312
(100 %)
1 diff
(100.0 %id)
DA255257 caudate nucleus .e 4 to 557 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA369043 subthalamic nucleus .e 4 to 565 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA873399 Prostate .e 4 to 577 2 to 575   tiling clone, capped   574/574
(100 %)
0 diff
(100 %id)
AK308222 Spleen .f 1 to 1839 1 to 1838 W10R M217T G401A R402G N403T ... tiling clone,   1838/1838
(100 %)
4 diff
(99.8 %id)
DC392036 Spleen .f 1 to 566 1 to 567       567/567
(100 %)
3 diff
(99.5 %id)
DQ180740   .g 1 to 249 1 to 249   tiling clone,   249/249
(100 %)
0 diff
(100 %id)
DQ180741   .g 1 to 1894 1 to 1893 exact     1893/1893
(100 %)
1 diff
(100.0 %id)
DQ180742   .g 1 to 1894 1 to 1893 exact tiling clone,   1893/1893
(100 %)
1 diff
(100.0 %id)
AK304403 trachea .h 1 to 2073 1 to 2073 D314G tiling clone,   2073/2073
(100 %)
1 diff
(100.0 %id)
DC418691 trachea .h 1 to 598 1 to 598       598/598
(100 %)
0 diff
(100 %id)
DC349248   .h 12 to 581 1 to 570       570/570
(100 %)
1 diff
(99.9 %id)
CD014049   .i 1 to 1768 3 to 1770 exact tiling clone,   1770/1770
(100 %)
2 diff
(99.9 %id)
BP431560   .j 1 to 348 1 to 348   tiling clone,   348/348
(100 %)
4 diff
(98.9 %id)
BF718263 epidermis, skin .j 243 to 535 293 to 1   tiling clone,   293/293
(100 %)
0 diff
(100 %id)
BF718519 epidermis, skin .j 243 to 534 293 to 2       292/293
(99 %)
0 diff
(100 %id)
AI420419 Prostate .j 322 to 542 245 to 25   tiling clone, AAA   221/221
(100 %)
2 diff
(99.1 %id)
AL709654 human skeletal muscle .k 1 to 256 1 to 256 exact tiling clone,   256/256
(100 %)
0 diff
(100 %id)
DB243080 stomach, tumor tissue .l-u 1 to 462 2 to 463   tiling clone, capped   462/462
(100 %)
2 diff
(99.6 %id)
Z44971 brain, total brain .l-u 117 to 385 1 to 269       269/269
(100 %)
3 diff
(98.9 %id)
BF954811 nervous_normal .l-u 383 to 750 367 to 1       367/367
(100 %)
12 diff
(96.8 %id)
BF964076 nervous_normal .l-u 383 to 750 370 to 3       368/370
(99 %)
0 diff
(100 %id)
AJ420464   .l-u 412 to 1798 9 to 1395 exact tiling clone, AAA   1387/1395
(99 %)
6 diff
(99.6 %id)
R99962 liver and spleen .l-u 413 to 868 1 to 468       468/470
(99 %)
21 diff
(95.6 %id)
BQ329995 lung_normal .l-u 573 to 930 360 to 5       356/382
(93 %)
0 diff
(100 %id)
CN281654 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .l-u 641 to 1281 1 to 641 exact     641/641
(100 %)
2 diff
(99.7 %id)
N54739 multiple sclerosis lesions .l-u 656 to 803 1 to 148       148/148
(100 %)
0 diff
(100 %id)
AF129755   .l-u 907 to 1798 1 to 893   AAA   893/893
(100 %)
3 diff
(99.7 %id)
C02325   .l-u 908 to 1204 1 to 298       298/349
(85 %)
7 diff
(98.0 %id)
BX105619 germinal center B cell .l-u 1095 to 1798 1 to 705   AAA   705/705
(100 %)
1 diff
(99.9 %id)
AA282384 germinal center B cell .l-u 1095 to 1450 1 to 356   fully sequenced,   356/356
(100 %)
1 diff
(99.8 %id)
BE613133 adenocarcinoma, ovary .l-u 1166 to 1923 780 to 3       778/976
(79 %)
0 diff
(100 %id)
BQ017878 lung, Metastatic Chondrosarcoma .l-u 1167 to 1798 654 to 19   AAA   636/645
(98 %)
3 diff
(99.6 %id)
BQ018716 lung, Metastatic Chondrosarcoma .l-u 1167 to 1798 649 to 19   AAA   631/640
(98 %)
1 diff
(99.9 %id)
BQ021650 lung, Metastatic Chondrosarcoma .l-u 1167 to 1798 651 to 19   AAA   633/649
(97 %)
1 diff
(99.9 %id)
CA443202 lung, Metastatic Chondrosarcoma .l-u 1167 to 1798 651 to 19   AAA   633/652
(97 %)
2 diff
(99.7 %id)
CA443340 lung, Metastatic Chondrosarcoma .l-u 1167 to 1798 652 to 19   AAA   634/651
(97 %)
3 diff
(99.6 %id)
W79129 heart .l-u 1177 to 1607 1 to 437       437/439
(99 %)
9 diff
(98.0 %id)
AF086438   .l-u 1182 to 1798 1 to 617   AAA   617/617
(100 %)
1 diff
(99.9 %id)
BM996831 lung, Metastatic Chondrosarcoma .l-u 1213 to 1798 606 to 19   AAA   588/588
(100 %)
4 diff
(99.4 %id)
AI806507 pooled .l-u 1237 to 1799 565 to 3       563/565
(99 %)
0 diff
(100 %id)
AA641044   .l-u 1244 to 1501 1 to 259       259/259
(100 %)
5 diff
(98.1 %id)
N45290 multiple sclerosis lesions .l-u 1261 to 1798 539 to 1       539/539
(100 %)
15 diff
(97.3 %id)
W94027 heart .l-u 1272 to 1556 1 to 286   fully sequenced,   286/286
(100 %)
1 diff
(99.7 %id)
AI817043 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .l-u 1282 to 1799 528 to 9       520/528
(98 %)
0 diff
(100 %id)
BF064148 colon, colon tumor, RER+ .l-u 1282 to 1799 518 to 1       518/518
(100 %)
0 diff
(100 %id)
AI885487 serous papillary carcinoma, high grade, 2pooled tumors, uterus .l-u 1283 to 1798 539 to 24   AAA   516/516
(100 %)
0 diff
(100 %id)
AI813317 2 pooled tumors (clear cell type), Kidney .l-u 1286 to 1799 520 to 7       514/520
(98 %)
0 diff
(100 %id)
AI076274 liver and spleen .l-u 1327 to 1799 473 to 1       473/473
(100 %)
0 diff
(100 %id)
BP385115 pancreatic islet .l-u 1344 to 1798 1 to 455     Submitted on the opposite strand 455/455
(100 %)
1 diff
(99.8 %id)
AA345128 gall bladder .l-u 1357 to 1602 1 to 246       246/246
(100 %)
0 diff
(100 %id)
AW953001   .l-u 1358 to 1798 1 to 441       441/505
(87 %)
11 diff
(97.9 %id)
AI160214 brain, glioblastoma (pooled) .l-u 1368 to 1799 439 to 8       432/439
(98 %)
0 diff
(100 %id)
W94306 heart .l-u 1369 to 1799 432 to 1       432/432
(100 %)
2 diff
(99.6 %id)
AA653735 normal prostate, Prostate .l-u 1375 to 1799 431 to 7       425/431
(98 %)
0 diff
(100 %id)
R99963 liver and spleen .l-u 1379 to 1778 406 to 1       406/410
(99 %)
19 diff
(95.4 %id)
AI435155 pooled .l-u 1380 to 1799 424 to 5       420/424
(99 %)
0 diff
(100 %id)
AI569876 adenocarcinoma, Pancreas .l-u 1380 to 1798 436 to 18   AAA   419/419
(100 %)
0 diff
(100 %id)
BF477437 brain, glioblastoma (pooled) .l-u 1390 to 1798 409 to 1       409/409
(100 %)
0 diff
(100 %id)
AA282041 germinal center B cell .l-u 1420 to 1800 381 to 1   fully sequenced,   381/381
(100 %)
1 diff
(99.8 %id)
AA707736 pineal gland .l-u 1427 to 1799 373 to 1       373/373
(100 %)
0 diff
(100 %id)
AA630760   .l-u 1452 to 1790 339 to 1       339/339
(100 %)
0 diff
(100 %id)
F03933 brain, total brain .l-u 1481 to 1798 318 to 1       318/318
(100 %)
1 diff
(99.7 %id)
AI079316 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .l-u 1484 to 1798 340 to 26   AAA   315/315
(100 %)
2 diff
(99.4 %id)
AA635841 normal prostate, Prostate .l-u 1498 to 1798 311 to 11   AAA   301/301
(100 %)
0 diff
(100 %id)
AI423225 brain, glioblastoma (pooled) .l-u 1522 to 1987 488 to 23   tiling clone, AAA   466/466
(100 %)
1 diff
(99.8 %id)
W94016 heart .l-u 1526 to 1973 455 to 1   fully sequenced,   455/455
(100 %)
7 diff
(98.5 %id)
AI567867 ovary, tumor, 5 pooled (see description) .l-u 1592 to 1974 383 to 1   tiling clone,   383/383
(100 %)
0 diff
(100 %id)
AI356681 brain, glioblastoma (pooled) .l-u 1666 to 1988 331 to 9       323/331
(97 %)
0 diff
(100 %id)
AI565190 pooled .l-u 1722 to 1973 251 to 1       251/251
(100 %)
2 diff
(99.3 %id)
BM997458 lung, Metastatic Chondrosarcoma .m-u 1 to 685 703 to 19 G7X R32S F33S F34S F35S ... tiling clone, AAA   685/689
(99 %)
3 diff
(99.6 %id)
BQ021641 lung, Metastatic Chondrosarcoma .m-u 22 to 685 683 to 19   tiling clone, AAA   665/665
(100 %)
1 diff
(99.9 %id)
DA232771 brain .n 1 to 568 2 to 569 exact tiling clone, capped   568/568
(100 %)
3 diff
(99.5 %id)
BE815235 breast_normal .o-u 1 to 475 14 to 487 exact tiling clone,   474/489
(96 %)
6 diff
(98.8 %id)
CR737190 Prostate .p-u 1 to 435 1 to 435 F74X V76X S81X L83X S84X tiling clone,   435/440
(98 %)
1 diff
(99.8 %id)
CD609925   Gene PTGS1, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l-u, .m-u, .n, .o-u, .p-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI