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Gene WNK3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
78 supporting clones for gene WNK3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AY352048 brain .a 1 to 7744 1 to 7743 exact tiling clone,   7743/7743
(100 %)
1 diff
(100.0 %id)
NM_020922.4   .a 1 to 11341 1 to 11341 exact RefSeq, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 11341/11341
(100 %)
0 diff
(100 %id)
AY082340 brain .a 440 to 5842 1 to 5403 S10N     5403/5403
(100 %)
1 diff
(100.0 %id)
NM_001002838.3   .b 1 to 11170 1 to 11170 exact RefSeq, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 11170/11170
(100 %)
0 diff
(100 %id)
AJ409088 brain .b 440 to 5671 1 to 5232 exact tiling clone,   5232/5232
(100 %)
0 diff
(100 %id)
DR007205 testis .b 520 to 1172 1 to 653       653/653
(100 %)
2 diff
(99.7 %id)
AV753673 pituitary tumor .b 765 to 1370 1 to 602       602/615
(97 %)
8 diff
(98.7 %id)
BF918598 nervous_tumor .b 1301 to 1691 19 to 405       389/424
(91 %)
8 diff
(98.2 %id)
AB046786   .b 1729 to 7573 1 to 5844   tiling clone, available from KIAA,   5844/5844
(100 %)
5 diff
(100.0 %id)
R41152   .b 4310 to 4591 1 to 282       282/282
(100 %)
6 diff
(97.9 %id)
R41053   .b 4310 to 4591 1 to 282       282/282
(100 %)
6 diff
(97.9 %id)
CN359895 embryonic stem cells, cell lines H1, H7, andH9 .b 4416 to 5062 1 to 648       648/648
(100 %)
3 diff
(99.6 %id)
BX282619   .b 4949 to 5286 1 to 339       339/340
(99 %)
2 diff
(99.5 %id)
CD644002 Embryonic Stem cells .b 5066 to 5828 1 to 763       763/763
(100 %)
2 diff
(99.8 %id)
AI190890   .b 5344 to 5753 427 to 18   AAA   410/410
(100 %)
0 diff
(100 %id)
T10115   .b 5854 to 6168 15 to 329       315/329
(95 %)
6 diff
(98.2 %id)
Z44479 brain, total brain .b 5855 to 6158 1 to 304   tiling clone,   304/304
(100 %)
0 diff
(100 %id)
H06564 whole brain .b 5856 to 6277 1 to 433       433/498
(86 %)
13 diff
(97.4 %id)
AA412230.
matches multiple genes
  .b 6495 to 6649 1 to 155     also hits gene TRAPPC4 155/155
(100 %)
1 diff
(99.4 %id)
CR737152   .b 6496 to 7203 1 to 709       709/709
(100 %)
1 diff
(99.9 %id)
DA337547 hippocampus .b 7017 to 7573 2 to 560   capped, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 559/559
(100 %)
2 diff
(99.7 %id)
AI341748   .b 7119 to 7577 459 to 1       459/459
(100 %)
0 diff
(100 %id)
AW172290 pooled .b 7131 to 7579 449 to 1       449/449
(100 %)
1 diff
(99.8 %id)
H06509 whole brain .b 7142 to 7582 453 to 1       453/499
(90 %)
21 diff
(95.8 %id)
AW592419 pooled .b 7148 to 7576 429 to 1       429/429
(100 %)
0 diff
(100 %id)
AA399218.
matches multiple genes
  .b 7150 to 7576 427 to 1     also hits gene GRK4 427/427
(100 %)
0 diff
(100 %id)
AI004108   .b 7184 to 7576 393 to 1       393/393
(100 %)
1 diff
(99.8 %id)
BU166946 melanotic melanoma, skin .b 7208 to 7576 380 to 12     Submitted on the opposite strand 369/381
(96 %)
0 diff
(100 %id)
T10114   .b 7330 to 7576 247 to 1       247/249
(99 %)
5 diff
(98.0 %id)
DB486930 hypothalamus .b 7519 to 7806 1 to 289       289/289
(100 %)
13 diff
(95.6 %id)
DB489894 hypothalamus .b 7519 to 7966 1 to 448       448/448
(100 %)
6 diff
(98.7 %id)
DB506424 hypothalamus .b 7519 to 7992 1 to 474   tiling clone,   474/474
(100 %)
2 diff
(99.6 %id)
DB075430 testis .b 7541 to 8102 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
AL705058 human skeletal muscle .b 7862 to 8467 1 to 606       606/606
(100 %)
0 diff
(100 %id)
AK124653 amygdala .b 7907 to 11132 1 to 3226   tiling clone, available from FLJ,   3226/3226
(100 %)
2 diff
(100.0 %id)
DA159710 amygdala .b 7908 to 8457 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA128789 cerebellum .b 8074 to 8636 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA387234 thalamus .b 8114 to 8703 2 to 591   capped   590/592
(99 %)
1 diff
(99.9 %id)
DA408952 thalamus .b 8126 to 8787 2 to 663   capped   662/662
(100 %)
0 diff
(100 %id)
DA768825 brain .b 8128 to 8692 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
CN412846 embryonic stem cells, cell lines H1, H7, andH9 .b 8135 to 8856 1 to 722       722/722
(100 %)
0 diff
(100 %id)
BG943145 blood .b 8238 to 8488 251 to 1       251/251
(100 %)
1 diff
(99.7 %id)
DA791283 brain .b 8399 to 9030 2 to 628   capped   627/627
(100 %)
4 diff
(99.4 %id)
DA511139 brain .b 8421 to 8984 2 to 566   capped   565/565
(100 %)
3 diff
(99.5 %id)
DA504818 brain .b 8475 to 9048 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA498373 brain .b 8506 to 9085 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA298460 hippocampus .b 8507 to 9093 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
BM699100 eye, fetal eyes .b 8532 to 9145 1 to 614     Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 614/614
(100 %)
0 diff
(100 %id)
DA795733 brain .b 8578 to 9120 2 to 543   capped   542/542
(100 %)
5 diff
(99.1 %id)
AK054999 cerebellum .b 8635 to 11134 1 to 2499   tiling clone, available from FLJ,   2499/2499
(100 %)
2 diff
(100.0 %id)
DA060686 cerebellum .b 8636 to 9184 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
AA446530   .b 8679 to 9069 1 to 391       391/391
(100 %)
0 diff
(100 %id)
BI497217 cochlea, ear .b 8719 to 9243 8 to 532   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 525/532
(98 %)
6 diff
(98.9 %id)
BQ346333 nervous_tumor .b 9431 to 9665 246 to 1       246/246
(100 %)
14 diff
(94.4 %id)
W05125 lung .b 9445 to 9870 2 to 440       439/442
(99 %)
19 diff
(95.8 %id)
BE177659 head_neck .b 9566 to 10271 710 to 10     Submitted on the opposite strand 701/710
(98 %)
0 diff
(100 %id)
DA728131   .b 9829 to 10626 2 to 804   capped   803/808
(99 %)
9 diff
(98.9 %id)
R19701 whole brain .b 9983 to 10164 1 to 183     Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 183/183
(100 %)
1 diff
(99.5 %id)
AV651793 corresponding non cancerous liver tissue .b 9997 to 10628 9 to 641     Submitted on the opposite strand 633/648
(97 %)
17 diff
(97.4 %id)
AA412345   .b 10086 to 10485 1 to 400       400/400
(100 %)
3 diff
(99.3 %id)
BG564992 Liver .b 10216 to 10974 1 to 758       758/963
(78 %)
12 diff
(98.8 %id)
BM669758 eye, fetal eyes .b 10552 to 11132 599 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 581/581
(100 %)
0 diff
(100 %id)
AW295288   .b 10590 to 11033 451 to 9       443/451
(98 %)
7 diff
(98.5 %id)
DB296979 cerebellum .b 10605 to 11134 529 to 1       529/530
(99 %)
2 diff
(99.7 %id)
AA431825   .b 10616 to 11075 1 to 460       460/460
(100 %)
1 diff
(99.8 %id)
AI557431 Prostate .b 10637 to 11134 536 to 30   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 507/600
(84 %)
35 diff
(94.2 %id)
DB577723 hypothalamus .b 10664 to 11132 1 to 468     Submitted on the opposite strand 468/468
(100 %)
1 diff
(99.8 %id)
DB556240 hypothalamus .b 10674 to 11132 1 to 463     Submitted on the opposite strand 463/463
(100 %)
10 diff
(97.9 %id)
BE550594 pooled germ cell tumors .b 10691 to 11133 445 to 3       443/445
(99 %)
0 diff
(100 %id)
AA412471   .b 10719 to 11133 417 to 3       415/417
(99 %)
0 diff
(100 %id)
N75500 lung .b 10721 to 11132 409 to 1       409/410
(99 %)
10 diff
(97.6 %id)
AI797627 pooled .b 10761 to 11133 379 to 6       374/379
(98 %)
0 diff
(100 %id)
R43746 whole brain .b 10762 to 11172 430 to 7   tiling clone,   424/430
(98 %)
0 diff
(100 %id)
AA709186   .b 10821 to 11170 366 to 16   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 351/351
(100 %)
1 diff
(99.8 %id)
DB302086 amygdala .b 10851 to 11127 282 to 6       277/282
(98 %)
0 diff
(100 %id)
DB559638 hypothalamus .b 10927 to 11132 1 to 206     Submitted on the opposite strand 206/206
(100 %)
7 diff
(96.7 %id)
R44257 whole brain .b 10955 to 11170 233 to 16   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 218/218
(100 %)
2 diff
(99.1 %id)
AV745820 Pituitary .c-u 1 to 224 5 to 224   tiling clone,   224/235
(95 %)
5 diff
(97.9 %id)
AV746356 Pituitary .c-u 1 to 689 13 to 697 S10X P94L S95Q N96M V97C ... tiling clone,   685/719
(95 %)
11 diff
(98.5 %id)
AV745759 Pituitary .c-u 4 to 448 1 to 439       439/446
(98 %)
5 diff
(98.9 %id)
AV745332 Pituitary .c-u 35 to 583 1 to 540       540/541
(99 %)
8 diff
(98.6 %id)
AI608633 brain, tumor, 5 pooled (see description) .c-u 320 to 703 387 to 4   tiling clone,   384/387
(99 %)
0 diff
(100 %id)
M78294   .d-u 1 to 370 371 to 1 S5P L24P P25T G26R L27F ... tiling clone,   371/371
(100 %)
2 diff
(99.5 %id)
AV651087 corresponding non cancerous liver tissue Gene WNK3, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AV654913 corresponding non cancerous liver tissue Gene WNK3, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AV745679 Pituitary Gene WNK3, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c-u, .d-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C