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Gene PPP1CCTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
399 representative clones for gene PPP1CC back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB196862 trachea .a 1 to 577 2 to 578   tiling clone, capped   577/577
(100 %)
1 diff
(99.9 %id)
BX646361   .a 14 to 610 1 to 597   tiling clone,   597/597
(100 %)
1 diff
(99.9 %id)
TI_227714126   .a 560 to 1528 1046 to 93   tiling clone, AAA   956/999
(95 %)
28 diff
(97.2 %id)
BU854332 testis .a 653 to 1333 1 to 693   tiling clone,   693/830
(83 %)
20 diff
(97.6 %id)
BF791943 adrenal cortex carcinoma, cell line, adrenal gland .a 664 to 1495 1 to 845       845/962
(87 %)
40 diff
(95.9 %id)
AI568759 B-cell, chronic lymphotic leukemia .a 808 to 1529 719 to 1       719/742
(96 %)
15 diff
(98.0 %id)
AA776704   .a 913 to 1535 626 to 4       623/626
(99 %)
0 diff
(100 %id)
DB527343 testis .a 1057 to 1528 1 to 472     Submitted on the opposite strand 472/472
(100 %)
1 diff
(99.8 %id)
AW511179 pooled .a 1103 to 1531 429 to 1       429/429
(100 %)
2 diff
(99.6 %id)
DB515599 testis .a 1105 to 1531 1 to 428     Submitted on the opposite strand 428/429
(99 %)
2 diff
(99.6 %id)
DB508648 testis .a 1109 to 1526 1 to 412     Submitted on the opposite strand 412/414
(99 %)
21 diff
(95.0 %id)
AI219705 pooled .a 1109 to 1531 425 to 3       423/425
(99 %)
0 diff
(100 %id)
AI435551 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1130 to 1528 399 to 1       399/399
(100 %)
0 diff
(100 %id)
AA719248   .a 1150 to 1531 384 to 3       382/384
(99 %)
1 diff
(99.8 %id)
AA644400   .a 1171 to 1528 359 to 1       359/359
(100 %)
1 diff
(99.8 %id)
CA392131 eye, RPE/choroid .b 1 to 326 1 to 326   tiling clone,   326/326
(100 %)
1 diff
(99.7 %id)
CA392130 eye, RPE/choroid .b 896 to 1406 527 to 17   tiling clone, AAA   511/511
(100 %)
0 diff
(100 %id)
DA514523 brain .c 1 to 543 2 to 544   tiling clone, capped   543/543
(100 %)
0 diff
(100 %id)
BI829482 brain, medulla .c 13 to 718 1 to 706       706/706
(100 %)
8 diff
(98.9 %id)
DA701817   .c 26 to 520 2 to 496   capped   495/495
(100 %)
0 diff
(100 %id)
NM_002710.2   .c 27 to 2509 1 to 2483 exact RefSeq,   2483/2483
(100 %)
0 diff
(100 %id)
DA472620   .c 28 to 520 2 to 494   capped   493/493
(100 %)
0 diff
(100 %id)
BI550572 brain, hippocampus .c 33 to 691 1 to 660       660/661
(99 %)
6 diff
(99.1 %id)
DA815902   .c 34 to 610 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
BG771597 testis .c 35 to 779 1 to 746       746/746
(100 %)
14 diff
(98.2 %id)
DA551084   .c 44 to 569 2 to 527   capped   526/526
(100 %)
0 diff
(100 %id)
DA502932 brain .c 45 to 607 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DA740469   .c 45 to 595 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA358714 subthalamic nucleus .c 47 to 619 2 to 576   capped   575/575
(100 %)
3 diff
(99.5 %id)
DA516880 brain .c 50 to 579 2 to 531   capped   530/530
(100 %)
5 diff
(99.1 %id)
DA480503   .c 55 to 520 2 to 467   capped   466/466
(100 %)
0 diff
(100 %id)
DA494358 brain .c 56 to 636 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA761053 tongue .c 56 to 579 2 to 525   capped   524/524
(100 %)
1 diff
(99.9 %id)
DB205930 trachea .c 62 to 644 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA777838 brain .c 64 to 623 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA648290   .c 66 to 609 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA142522 alzheimer cortex .c 69 to 711 2 to 645   capped   644/644
(100 %)
1 diff
(99.9 %id)
DA874835 Prostate .c 71 to 648 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
BU507626 leiomyosarcoma, uterus .c 72 to 889 1 to 820       820/897
(91 %)
11 diff
(98.8 %id)
AL539130 brain, fetal brain .c 75 to 1020 1 to 939       939/944
(99 %)
23 diff
(97.6 %id)
DA784221 brain .c 80 to 650 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA010726 adrenal gland .c 81 to 665 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
DA070883 cerebellum .c 81 to 637 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA180154 amygdala .c 81 to 643 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA201955 brain .c 81 to 681 2 to 602   capped   601/601
(100 %)
2 diff
(99.7 %id)
DA210559 brain .c 81 to 647 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA294811 hippocampus .c 81 to 653 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA485384 brain .c 81 to 648 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA515177 brain .c 81 to 616 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DA515528 brain .c 81 to 633 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA591271 lung .c 81 to 648 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA631964 Kidney .c 81 to 618 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DA750061   .c 81 to 651 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA761538 tongue .c 81 to 579 2 to 500   capped   499/499
(100 %)
0 diff
(100 %id)
DA790269 brain .c 81 to 505 2 to 426   capped   425/425
(100 %)
0 diff
(100 %id)
DA793349 brain .c 81 to 610 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
DB015841 esophageal, tumor tissue .c 81 to 640 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DB041722 testis .c 81 to 623 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA286654 corpus callosum .c 86 to 658 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
BI597119 brain, hypothalamus .c 86 to 897 1 to 819       816/819
(99 %)
21 diff
(97.5 %id)
DA650107   .c 86 to 622 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA841659 placenta .c 86 to 625 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DB184241 liver, tumor tissue .c 86 to 666 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
DA552896   .c 87 to 652 2 to 568   capped   567/567
(100 %)
3 diff
(99.5 %id)
DA364179 subthalamic nucleus .c 88 to 652 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DA478801   .c 88 to 656 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA549205   .c 88 to 660 2 to 575   capped   574/574
(100 %)
3 diff
(99.5 %id)
DA748726   .c 88 to 651 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DA885175   .c 88 to 650 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
BM743622 Ascites, stomach .c 88 to 673 1 to 587       587/587
(100 %)
1 diff
(99.9 %id)
DA001189   .c 89 to 592 2 to 505   capped   504/504
(100 %)
0 diff
(100 %id)
DA005754   .c 89 to 671 2 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
DA011270 adrenal gland .c 89 to 635 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA012418 adrenal gland .c 89 to 658 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA020937   .c 89 to 658 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA033485   .c 89 to 660 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA042995 bladder .c 89 to 673 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
DA150181 amygdala .c 89 to 657 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA160669 amygdala .c 89 to 683 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
DA202243 brain .c 89 to 669 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
DA286866 corpus callosum .c 89 to 651 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DA449720 tongue, tumor tissue .c 89 to 666 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
DA464506   .c 89 to 655 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA478090   .c 89 to 646 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA495763 brain .c 89 to 656 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA500023 brain .c 89 to 663 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
DA506935 brain .c 89 to 660 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DA517657 brain .c 89 to 618 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
DA517714 brain .c 89 to 633 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA527609 brain .c 89 to 670 2 to 585   capped   584/584
(100 %)
2 diff
(99.7 %id)
DA535236 heart .c 89 to 667 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DB457956 testis .c 89 to 576 1 to 488       488/488
(100 %)
0 diff
(100 %id)
DA549148   .c 89 to 552 2 to 465   capped   464/464
(100 %)
0 diff
(100 %id)
DA554626   .c 89 to 650 2 to 563   capped   562/562
(100 %)
3 diff
(99.5 %id)
DA556576   .c 89 to 638 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA574778   .c 89 to 642 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA583140 lung .c 89 to 663 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA588055 lung .c 89 to 665 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
DA590959 lung .c 89 to 652 2 to 566   capped   565/565
(100 %)
3 diff
(99.5 %id)
DA600428   .c 89 to 647 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA603027   .c 89 to 353 2 to 266   capped   265/265
(100 %)
0 diff
(100 %id)
DA614990   .c 89 to 659 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA630629 Kidney .c 89 to 653 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA631332 Kidney .c 89 to 662 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DA650816   .c 89 to 633 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA660352   .c 89 to 671 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA666259   .c 89 to 630 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA666288   .c 89 to 642 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
AU122850   .c 89 to 750 2 to 663   capped   662/665
(99 %)
12 diff
(98.2 %id)
DA746001   .c 89 to 652 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DA747416   .c 89 to 567 2 to 480   capped   479/479
(100 %)
0 diff
(100 %id)
DA751885   .c 89 to 655 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA766047 tongue .c 89 to 660 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA772178 brain .c 89 to 651 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA788413 brain .c 89 to 675 2 to 590   capped   589/589
(100 %)
2 diff
(99.7 %id)
DA793633 brain .c 89 to 640 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA813119   .c 89 to 644 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA818382   .c 89 to 635 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA819836   .c 89 to 661 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA871087 Prostate .c 89 to 660 2 to 574   capped   573/573
(100 %)
4 diff
(99.4 %id)
DA874421 Prostate .c 89 to 646 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA886539   .c 89 to 633 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA925521 small intestine .c 89 to 660 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA932542 Spleen .c 89 to 655 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA941109 Spleen .c 89 to 637 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA943940 Spleen .c 89 to 660 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA983151 synovial membrane tissue from rheumatioidarthritis .c 89 to 641 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB011010 colon, tumor tissue .c 89 to 538 2 to 451   capped   450/450
(100 %)
0 diff
(100 %id)
DB104418 thymus .c 89 to 646 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DB111199 thymus .c 89 to 666 2 to 581   capped   580/580
(100 %)
2 diff
(99.7 %id)
DB120813 thymus .c 89 to 650 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DB198795 trachea .c 89 to 663 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DB210834 trachea .c 89 to 656 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DB256472 uterus .c 89 to 660 2 to 575   capped   574/574
(100 %)
4 diff
(99.4 %id)
DB259837 uterus .c 89 to 662 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB265051 uterus .c 89 to 673 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DB268111 uterus .c 89 to 652 2 to 567   capped   566/566
(100 %)
3 diff
(99.5 %id)
DA161957 amygdala .c 90 to 662 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
AL536514 brain, fetal brain .c 90 to 1068 1 to 970       970/977
(99 %)
14 diff
(98.6 %id)
DA454345 tongue, tumor tissue .c 90 to 656 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA475933   .c 90 to 650 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA499496 brain .c 90 to 661 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA538494 Kidney .c 90 to 662 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA691222   .c 90 to 650 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA697326   .c 90 to 663 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA761478 tongue .c 90 to 635 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA786644 brain .c 90 to 669 2 to 582   capped   581/581
(100 %)
4 diff
(99.4 %id)
DA815408   .c 90 to 664 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA951983 Spleen .c 90 to 655 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DA091158 cerebellum .c 91 to 648 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA163282 amygdala .c 91 to 588 2 to 499   capped   498/498
(100 %)
0 diff
(100 %id)
DA513991 brain .c 91 to 653 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA522511 brain .c 91 to 661 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA538721 Kidney .c 91 to 639 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA583122 lung .c 91 to 682 2 to 594   capped   593/593
(100 %)
1 diff
(99.9 %id)
TI_45216223   .c 91 to 897 93 to 906       811/906
(89 %)
22 diff
(97.6 %id)
BM762464 myeloma .c 91 to 756 1 to 666       666/666
(100 %)
0 diff
(100 %id)
DA911131   .c 91 to 664 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA941259 Spleen .c 91 to 585 2 to 496   capped   495/495
(100 %)
0 diff
(100 %id)
DA986597 synovial membrane tissue from rheumatioidarthritis .c 91 to 663 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB254811 uterus .c 91 to 655 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA014704 adrenal gland .c 92 to 676 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
DA151317 amygdala .c 92 to 660 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA200747 brain .c 92 to 653 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA293013 hippocampus .c 92 to 651 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA421347 cervix .c 92 to 677 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
DA544242   .c 92 to 647 2 to 560   capped   559/559
(100 %)
3 diff
(99.5 %id)
DA666802   .c 92 to 651 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA706408   .c 92 to 569 2 to 479   capped   478/478
(100 %)
0 diff
(100 %id)
DA715418   .c 92 to 656 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA751004   .c 92 to 659 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA753505   .c 92 to 567 2 to 477   capped   476/476
(100 %)
0 diff
(100 %id)
DA767248 tongue .c 92 to 647 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA774304 brain .c 92 to 663 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA813140   .c 92 to 645 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA903599   .c 92 to 513 2 to 423   capped   422/422
(100 %)
0 diff
(100 %id)
DA917892 small intestine .c 92 to 675 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA921649 small intestine .c 92 to 671 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA928618 small intestine .c 92 to 574 2 to 484   capped   483/483
(100 %)
0 diff
(100 %id)
DB125088 thymus .c 92 to 613 2 to 523   capped   522/522
(100 %)
0 diff
(100 %id)
DB176046 kidney, tumor tissue .c 92 to 658 2 to 572   capped   571/571
(100 %)
4 diff
(99.3 %id)
DB192816 ovary, tumor tissue .c 92 to 613 2 to 523   capped   522/522
(100 %)
0 diff
(100 %id)
DB201624 trachea .c 92 to 683 2 to 594   capped   593/593
(100 %)
2 diff
(99.7 %id)
DB204390 trachea .c 92 to 666 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA782150 brain .c 93 to 662 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB455717 testis .c 94 to 576 1 to 483       483/483
(100 %)
0 diff
(100 %id)
DA157560 amygdala .c 95 to 674 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA795205 brain .c 95 to 588 2 to 495   capped   494/494
(100 %)
0 diff
(100 %id)
DA949259 Spleen .c 95 to 657 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB251654 uterus .c 95 to 648 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
AL514654 neuroblastoma, placenta .c 98 to 1071 1 to 973   fully sequenced,   973/973
(100 %)
6 diff
(99.4 %id)
CR602534 neuroblastoma .c 98 to 1674 1 to 1577 exact     1577/1577
(100 %)
0 diff
(100 %id)
BG480247 choriocarcinoma, placenta .c 102 to 684 1 to 591       591/871
(67 %)
23 diff
(97.4 %id)
CN412052 embryonic stem cells, DMSO-treated H9 cellline .c 103 to 867 1 to 765       765/765
(100 %)
0 diff
(100 %id)
BQ637056 eye, retina .c 103 to 504 1 to 402       402/402
(100 %)
0 diff
(100 %id)
BM552097 leiomyosarcoma, uterus .c 104 to 889 1 to 787       787/1057
(74 %)
16 diff
(98.5 %id)
BM469802 lymph, lymphoma, cell line .c 104 to 1020 1 to 922       922/1048
(87 %)
10 diff
(99.1 %id)
CX872949 embryonic stem .c 104 to 916 1 to 813       813/813
(100 %)
0 diff
(100 %id)
CX872939 embryonic stem .c 104 to 854 1 to 751       751/751
(100 %)
0 diff
(100 %id)
CK429264 eye, lacrimal gland .c 104 to 756 1 to 653       653/653
(100 %)
0 diff
(100 %id)
CN412020 embryonic stem cells, DMSO-treated H9 cellline .c 105 to 727 1 to 624       624/624
(100 %)
1 diff
(99.9 %id)
CN412045 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 105 to 700 1 to 596       596/596
(100 %)
0 diff
(100 %id)
CN482189 eye .c 105 to 744 1 to 640       640/640
(100 %)
0 diff
(100 %id)
CN412040 embryonic stem cells, cell lines H1, H7, andH9 .c 106 to 734 1 to 629       629/629
(100 %)
0 diff
(100 %id)
BX416091 neuroblastoma .c 106 to 796 1 to 691       691/691
(100 %)
0 diff
(100 %id)
BI909191 leukocyte .c 106 to 690 1 to 604       604/897
(67 %)
26 diff
(97.2 %id)
CX753718 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 106 to 805 1 to 700     Submitted on the opposite strand 700/700
(100 %)
0 diff
(100 %id)
BF307749 muscle, rhabdomyosarcoma .c 107 to 689 1 to 577       577/883
(65 %)
25 diff
(97.2 %id)
BM802741 embryonal carcinoma, cell line, testis .c 107 to 931 1 to 831       831/1155
(71 %)
15 diff
(98.8 %id)
BU153621 eye, retinoblastoma .c 107 to 1019 1 to 915       915/915
(100 %)
25 diff
(97.3 %id)
BC014073 Placenta, choriocarcinoma .c 108 to 1671 1 to 1564 exact available from MGC, AAA   1564/1564
(100 %)
1 diff
(100.0 %id)
CX760261 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 108 to 873 1 to 766     Submitted on the opposite strand 766/766
(100 %)
1 diff
(99.9 %id)
CX756970 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 108 to 857 1 to 740     Submitted on the opposite strand 744/788
(94 %)
8 diff
(99.0 %id)
CX165150 human embryonic stem cells differentiated toan early endodermal cell type .c 109 to 911 1 to 803       803/803
(100 %)
0 diff
(100 %id)
CX786313 human embryonic stem cells .c 109 to 892 1 to 784       784/784
(100 %)
2 diff
(99.8 %id)
CV806924 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 109 to 801 1 to 693       693/694
(99 %)
0 diff
(100 %id)
BM470317 eye, retinoblastoma .c 110 to 693 25 to 614       590/1246
(47 %)
12 diff
(99.1 %id)
AL515264 neuroblastoma, placenta .c 112 to 1267 1 to 1148 R142X N271X Y272L C273L G274W ...     1148/1148
(100 %)
14 diff
(98.8 %id)
CN412039 embryonic stem cells, DMSO-treated H9 cellline .c 112 to 763 1 to 652       652/652
(100 %)
1 diff
(99.9 %id)
CA396176 eye, RPE/choroid .c 112 to 674 1 to 563       563/563
(100 %)
2 diff
(99.7 %id)
BQ639443 eye, retina .c 112 to 688 1 to 577       577/577
(100 %)
0 diff
(100 %id)
BQ049133 lymph, lymphoma, cell line .c 114 to 1068 1 to 964       964/1008
(95 %)
24 diff
(97.7 %id)
CN412036 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 115 to 492 1 to 378       378/378
(100 %)
0 diff
(100 %id)
BG422179 Kidney, renal cell adenocarcinoma .c 115 to 692 1 to 578       578/762
(75 %)
9 diff
(98.9 %id)
BQ421432 embryonal carcinoma, cell line, testis .c 116 to 904 1 to 793       793/886
(89 %)
16 diff
(98.2 %id)
CV810926 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 116 to 862 1 to 749       747/749
(99 %)
8 diff
(99.0 %id)
BG024535 lymph, lymphoma, cell line .c 117 to 676 1 to 564       564/902
(62 %)
17 diff
(98.2 %id)
CX165699 human embryonic stem cells differentiated toan early endodermal cell type .c 117 to 933 1 to 817       817/817
(100 %)
0 diff
(100 %id)
CX870895 embryonic stem .c 117 to 821 1 to 705       705/705
(100 %)
0 diff
(100 %id)
X74008   .c 117 to 2380 1 to 2263 exact     2263/2263
(100 %)
1 diff
(100.0 %id)
CX758192 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 119 to 887 1 to 758     Submitted on the opposite strand 758/863
(87 %)
9 diff
(99.0 %id)
CD251446 brain, Pituitary .c 119 to 691 1 to 578       578/984
(58 %)
18 diff
(98.2 %id)
BQ422677 embryonal carcinoma, cell line, testis .c 120 to 959 1 to 847       847/879
(96 %)
20 diff
(97.8 %id)
BU156646 eye, retinoblastoma .c 120 to 991 1 to 879       879/879
(100 %)
22 diff
(97.5 %id)
BG385645 adenocarcinoma cell line, colon .c 123 to 693 1 to 574       574/581
(98 %)
9 diff
(98.5 %id)
CN412041 embryonic stem cells, DMSO-treated H9 cellline .c 126 to 794 1 to 669       669/669
(100 %)
0 diff
(100 %id)
BE779830 eye, retinoblastoma .c 126 to 687 1 to 567       565/1084
(52 %)
21 diff
(98.1 %id)
BE882448 leiomyosarcoma, uterus .c 126 to 777 1 to 663       661/1062
(62 %)
22 diff
(98.0 %id)
CN412044 embryonic stem cells, cell lines H1, H7, andH9 .c 128 to 756 1 to 629       629/629
(100 %)
0 diff
(100 %id)
CN412049 embryonic stem cells, cell lines H1, H7, andH9 .c 128 to 765 1 to 638       638/638
(100 %)
0 diff
(100 %id)
TI_154161617   .c 131 to 690 72 to 631       560/572
(97 %)
7 diff
(98.8 %id)
CN412029 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 133 to 764 1 to 632       632/632
(100 %)
0 diff
(100 %id)
BQ425463 eye, retinoblastoma .c 140 to 1020 1 to 882       882/907
(97 %)
7 diff
(99.3 %id)
CN412025 embryonic stem cells, cell lines H1, H7, andH9 .c 143 to 765 1 to 623       623/623
(100 %)
0 diff
(100 %id)
CN412055 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 143 to 785 1 to 643       643/643
(100 %)
0 diff
(100 %id)
TI_154145774   .c 145 to 796 59 to 698       640/815
(78 %)
49 diff
(94.0 %id)
DB115113 thymus .c 156 to 703 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
BM461978 leiomyosarcoma, uterus .c 159 to 981 1 to 829       829/865
(95 %)
8 diff
(99.1 %id)
DN998489 bone marrow .c 173 to 917 1 to 745       745/745
(100 %)
2 diff
(99.8 %id)
CN412028 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 182 to 818 1 to 639       637/639
(99 %)
2 diff
(99.7 %id)
BG389563 embryonal carcinoma, cell line, testis .c 188 to 1020 1 to 841       841/1077
(78 %)
15 diff
(98.7 %id)
AL515669 brain, neuroblastoma, neuroblastoma cells .c 198 to 1255 1 to 1044 C39X S100L K141X N157X K234N ...     1044/1071
(97 %)
24 diff
(97.8 %id)
DA592024 lung .c 210 to 720 2 to 512   capped   511/511
(100 %)
0 diff
(100 %id)
BU509186 leiomyosarcoma, uterus .c 222 to 1095 1 to 880       880/896
(98 %)
18 diff
(98.0 %id)
BU166609 melanotic melanoma, skin .c 268 to 1020 1 to 761       761/940
(80 %)
10 diff
(99.0 %id)
BU902499 leiomyosarcoma, uterus .c 277 to 1151 1 to 877       877/922
(95 %)
6 diff
(99.4 %id)
DA690695   .c 281 to 852 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
AK297882 heart .c 283 to 1865 1 to 1583       1583/1583
(100 %)
3 diff
(99.9 %id)
L07395 skeletal muscle .c 284 to 2509 1 to 2226   tiling clone,   2226/2226
(100 %)
0 diff
(100 %id)
BU171499 melanotic melanoma, skin .c 287 to 1133 1 to 863       862/869
(99 %)
22 diff
(97.5 %id)
BQ430850 embryonal carcinoma, cell line, testis .c 314 to 1152 1 to 842       842/889
(94 %)
9 diff
(99.0 %id)
AW845225 colon .c 331 to 749 422 to 4       419/422
(99 %)
10 diff
(97.7 %id)
BQ362499 stomach .c 356 to 956 602 to 1       602/602
(100 %)
7 diff
(98.9 %id)
BI258909 cervical carcinoma cell line, cervix .c 385 to 1143 1 to 769       769/937
(82 %)
19 diff
(98.0 %id)
AA355941   .c 399 to 671 1 to 273       273/278
(98 %)
1 diff
(99.7 %id)
AA305221 colon .c 434 to 767 1 to 334       334/334
(100 %)
0 diff
(100 %id)
BQ945993 leiomyosarcoma, uterus .c 461 to 1390 1 to 934       934/934
(100 %)
15 diff
(98.4 %id)
DA908074   .c 477 to 1058 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA518126 brain .c 483 to 1032 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA593725 lung .c 497 to 1061 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
BQ216002 embryonal carcinoma, cell line, testis .c 509 to 1337 1 to 832       832/833
(99 %)
6 diff
(99.3 %id)
BE783423 eye, retinoblastoma .c 516 to 1129 1 to 614       614/614
(100 %)
0 diff
(100 %id)
DA299629 hippocampus .c 529 to 1090 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
CN412038 embryonic stem cells, DMSO-treated H9 cellline .c 613 to 1053 1 to 441       441/441
(100 %)
0 diff
(100 %id)
FN103530 breast carcinoma .c 614 to 674 62 to 1     Submitted on the opposite strand 62/63
(98 %)
1 diff
(98.5 %id)
CN412027 embryonic stem cells, DMSO-treated H9 cellline .c 637 to 1239 1 to 603       603/603
(100 %)
0 diff
(100 %id)
BM787683 stomach .c 650 to 1206 1 to 557       557/557
(100 %)
0 diff
(100 %id)
BF092399 testis_normal .c 664 to 813 154 to 5       150/154
(97 %)
1 diff
(99.4 %id)
BF092559 testis_normal .c 664 to 811 147 to 1       147/147
(100 %)
0 diff
(100 %id)
BF092561 testis_normal .c 664 to 1002 338 to 1       338/338
(100 %)
4 diff
(98.9 %id)
BF094908 uterus_tumor .c 664 to 910 247 to 1       247/247
(100 %)
1 diff
(99.6 %id)
BJ990116 hepatoblastoma .c 671 to 1253 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BU167829 leiomyosarcoma, uterus .c 690 to 1543 2 to 864       863/865
(99 %)
14 diff
(98.4 %id)
BG681159 skin, squamous cell carcinoma .c 693 to 1555 1 to 859       859/875
(98 %)
11 diff
(98.8 %id)
BM839474 Ascites, stomach .c 703 to 1191 1 to 489       489/489
(100 %)
0 diff
(100 %id)
AU124419   .c 709 to 1591 2 to 892   capped   891/891
(100 %)
14 diff
(98.5 %id)
AL121040 melanoma (MeWo cell line) .c 717 to 1231 1 to 515       515/515
(100 %)
0 diff
(100 %id)
AU118740 whole embryo, mainly head .c 727 to 1546 2 to 818   capped   817/819
(99 %)
14 diff
(98.3 %id)
BP370721 testis .c 731 to 1286 1 to 556       556/556
(100 %)
0 diff
(100 %id)
BU153333 embryonal carcinoma, cell line, testis .c 742 to 1609 1 to 886       886/916
(96 %)
23 diff
(97.5 %id)
FN176166 breast carcinoma .c 793 to 887 97 to 2     Submitted on the opposite strand 96/99
(96 %)
0 diff
(100 %id)
DA539277 Kidney .c 819 to 1366 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
F06785 brain, total brain .c 823 to 1110 1 to 288       288/288
(100 %)
0 diff
(100 %id)
BG740820 skin .c 839 to 1489 1 to 651       651/651
(100 %)
2 diff
(99.7 %id)
BE093668 breast .c 896 to 1230 332 to 2     Submitted on the opposite strand 331/332
(99 %)
2 diff
(99.4 %id)
FN088406 breast carcinoma .c 933 to 1020 88 to 5     Submitted on the opposite strand 84/88
(95 %)
0 diff
(100 %id)
BF798525 colon_ins .c 981 to 1293 313 to 1     Submitted on the opposite strand 313/326
(96 %)
5 diff
(98.5 %id)
BM459138 melanotic melanoma, skin .c 992 to 1954 1 to 980       980/1028
(95 %)
21 diff
(98.0 %id)
FN159385 breast carcinoma .c 1004 to 1103 100 to 1     Submitted on the opposite strand 100/100
(100 %)
0 diff
(100 %id)
AA301155 testis .c 1022 to 1271 1 to 250       250/250
(100 %)
0 diff
(100 %id)
AL514653 neuroblastoma, placenta .c 1041 to 1674 634 to 1   fully sequenced,   634/634
(100 %)
4 diff
(99.4 %id)
AI630287 blood .c 1086 to 1318 233 to 1       233/240
(97 %)
0 diff
(100 %id)
AI630469 blood .c 1086 to 1318 233 to 1       233/240
(97 %)
0 diff
(100 %id)
BM854189 stomach .c 1120 to 1262 1 to 143       143/143
(100 %)
0 diff
(100 %id)
CX785958 human embryonic stem cells .c 1121 to 1858 1 to 738       738/738
(100 %)
0 diff
(100 %id)
EC556962 Prostate .c 1140 to 1245 106 to 1     Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 106/106
(100 %)
0 diff
(100 %id)
EC515337 Prostate .c 1141 to 1243 110 to 8     Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 103/110
(93 %)
0 diff
(100 %id)
FN073105 breast carcinoma .c 1151 to 1244 95 to 1     Submitted on the opposite strand 95/100
(95 %)
1 diff
(99.0 %id)
AA376797 small intestine .c 1159 to 1490 1 to 332       332/332
(100 %)
0 diff
(100 %id)
BG110551 Bone, osteosarcoma, cell line .c 1170 to 1897 1 to 729       729/781
(93 %)
5 diff
(99.4 %id)
BF089126 head_neck .c 1229 to 1598 455 to 85       371/463
(80 %)
0 diff
(100 %id)
BF792330 adrenal cortex carcinoma, cell line, adrenal gland .c 1270 to 2037 1 to 763       763/764
(99 %)
17 diff
(97.8 %id)
CB128093 Liver .c 1328 to 1941 1 to 614       614/614
(100 %)
0 diff
(100 %id)
AL567687 brain, fetal brain .c 1346 to 2375 1024 to 1       1024/1069
(95 %)
21 diff
(98.1 %id)
AL515668 brain, neuroblastoma, neuroblastoma cells .c 1354 to 2492 1131 to 1       1131/1135
(99 %)
16 diff
(98.6 %id)
EC577110 Prostate .c 1377 to 1432 1 to 56       56/56
(100 %)
0 diff
(100 %id)
FN060940 breast carcinoma .c 1400 to 1523 1 to 124       124/124
(100 %)
0 diff
(100 %id)
DA264543 caudate nucleus .c 1401 to 1970 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
AA329576   .c 1421 to 1691 1 to 271       271/271
(100 %)
0 diff
(100 %id)
AL515263 neuroblastoma, placenta .c 1431 to 2508 1073 to 1       1073/1075
(99 %)
18 diff
(98.4 %id)
AL566369 brain, fetal brain .c 1433 to 2482 1049 to 1       1049/1050
(99 %)
22 diff
(98.0 %id)
BM466238 embryonal carcinoma, cell line, testis .c 1434 to 2411 1 to 982   AAA   982/982
(100 %)
28 diff
(97.2 %id)
FN111719 breast carcinoma .c 1450 to 1554 112 to 9     Submitted on the opposite strand 104/113
(92 %)
0 diff
(100 %id)
CN412056 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 1464 to 1735 1 to 272       272/272
(100 %)
0 diff
(100 %id)
BM693838 eye, lens .c 1468 to 2010 1 to 545   fully sequenced,   545/545
(100 %)
0 diff
(100 %id)
TI_154126621   .c 1483 to 2411 1011 to 96   AAA   916/979
(93 %)
14 diff
(98.6 %id)
TI_154121495   .c 1487 to 2411 995 to 87   AAA   909/1005
(90 %)
28 diff
(97.3 %id)
FN139545 breast carcinoma .c 1492 to 1594 110 to 8     Submitted on the opposite strand 103/110
(93 %)
0 diff
(100 %id)
BP225994   .c 1514 to 2094 1 to 581       581/581
(100 %)
0 diff
(100 %id)
FN173170 breast carcinoma .c 1531 to 1636 107 to 2     Submitted on the opposite strand 106/107
(99 %)
0 diff
(100 %id)
BP264852 muscle .c 1559 to 2187 1 to 630       630/643
(97 %)
2 diff
(99.7 %id)
CB243411 Human Lung Epithelial cells, lung .c 1576 to 2411 851 to 19   AAA   833/836
(99 %)
7 diff
(99.2 %id)
FN131051 breast carcinoma .c 1590 to 1691 103 to 1     Submitted on the opposite strand 103/103
(100 %)
1 diff
(99.1 %id)
AI299021 carcinoid, lung .c 1607 to 2075 1 to 469     Submitted on the opposite strand 469/469
(100 %)
0 diff
(100 %id)
BP223116 colon mucosa .c 1634 to 2441 1 to 811       811/846
(95 %)
14 diff
(98.4 %id)
AI819568 lymph node, lymphoma, follicular mixed small and largecell .c 1688 to 2412 723 to 1       723/723
(100 %)
14 diff
(98.1 %id)
AA319057 adrenal gland .c 1689 to 2009 1 to 321       321/321
(100 %)
0 diff
(100 %id)
BQ003618 Chondrosarcoma, Left Pelvis .c 1705 to 2411 725 to 19   AAA   707/707
(100 %)
0 diff
(100 %id)
CA424076 cell lines, Chondrosarcoma .c 1705 to 2411 724 to 19   AAA   706/706
(100 %)
1 diff
(99.9 %id)
CA416710 Chondrosarcoma Cell line .c 1710 to 2411 720 to 19   AAA   702/702
(100 %)
0 diff
(100 %id)
CN412057 embryonic stem cells, DMSO-treated H9 cellline .c 1717 to 2123 1 to 407       407/407
(100 %)
0 diff
(100 %id)
CB151037 cervix, Uterine .c 1730 to 2366 1 to 637       637/637
(100 %)
0 diff
(100 %id)
BG036117 adenocarcinoma, cell line, Liver .c 1774 to 2410 1 to 638   AAA   638/638
(100 %)
3 diff
(99.6 %id)
AV753319 Pituitary .c 1775 to 2491 707 to 1     Submitted on the opposite strand 707/852
(82 %)
21 diff
(97.6 %id)
FN168228 breast carcinoma .c 1781 to 1894 113 to 1     Submitted on the opposite strand 113/113
(100 %)
5 diff
(95.6 %id)
FN135080 breast carcinoma .c 1783 to 1895 110 to 1     Submitted on the opposite strand 110/111
(99 %)
3 diff
(97.3 %id)
AA363832 pineal body .c 1820 to 2124 1 to 305       305/305
(100 %)
0 diff
(100 %id)
BE857343 brain, glioblastoma (pooled) .c 1849 to 2413 565 to 1       565/565
(100 %)
0 diff
(100 %id)
DN918070   .c 1855 to 2411 581 to 25   AAA   557/557
(100 %)
5 diff
(99.2 %id)
AU152674   .c 1873 to 2411 536 to 1       536/536
(100 %)
10 diff
(98.2 %id)
BE874428 large cell carcinoma, undifferentiated, lung .c 1936 to 2370 1 to 435       435/435
(100 %)
0 diff
(100 %id)
BJ990117 hepatoblastoma .c 1949 to 2488 540 to 1       540/540
(100 %)
0 diff
(100 %id)
AW196934 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .c 1950 to 2508 559 to 1       559/559
(100 %)
0 diff
(100 %id)
FN108398 breast carcinoma .c 1970 to 2040 68 to 1     Submitted on the opposite strand 68/68
(100 %)
3 diff
(95.6 %id)
BM670900 eye, lens .c 1980 to 2411 450 to 19   fully sequenced, AAA   432/432
(100 %)
0 diff
(100 %id)
DN914065   .c 1982 to 2465 486 to 3       484/486
(99 %)
0 diff
(100 %id)
FN172051 breast carcinoma .c 1997 to 2108 114 to 1     Submitted on the opposite strand 114/114
(100 %)
2 diff
(98.3 %id)
AA233644 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 2002 to 2418 417 to 1       417/417
(100 %)
0 diff
(100 %id)
FN115763 breast carcinoma .c 2004 to 2116 113 to 1     Submitted on the opposite strand 113/113
(100 %)
0 diff
(100 %id)
AA977790 Kidney, kidney tumor .c 2029 to 2507 479 to 1       479/479
(100 %)
0 diff
(100 %id)
DB523452 testis .c 2038 to 2507 1 to 470     Submitted on the opposite strand 470/470
(100 %)
0 diff
(100 %id)
AI095115 brain, glioblastoma (pooled) .c 2054 to 2508 455 to 1       455/455
(100 %)
0 diff
(100 %id)
DB564589 hypothalamus .c 2056 to 2507 1 to 452     Submitted on the opposite strand 452/452
(100 %)
0 diff
(100 %id)
EC514974 Prostate .c 2063 to 2169 1 to 107       107/107
(100 %)
0 diff
(100 %id)
DB554465 hypothalamus .c 2064 to 2509 1 to 443     Submitted on the opposite strand 443/444
(99 %)
36 diff
(91.9 %id)
T29687 synovial membrane .c 2064 to 2411 348 to 1     Submitted on the opposite strand 348/348
(100 %)
2 diff
(99.5 %id)
DB525207 testis .c 2068 to 2507 1 to 440     Submitted on the opposite strand 440/440
(100 %)
0 diff
(100 %id)
DB080583 testis .c 2074 to 2639 2 to 568   tiling clone, capped   567/567
(100 %)
2 diff
(99.7 %id)
AI354380 esophagus, squamous cell carcinoma .c 2086 to 2507 422 to 1       422/422
(100 %)
0 diff
(100 %id)
AA847093 ovary .c 2087 to 2507 431 to 11   AAA   421/421
(100 %)
4 diff
(99.1 %id)
DB533467 hippocampus .c 2091 to 2507 1 to 417     Submitted on the opposite strand 417/417
(100 %)
0 diff
(100 %id)
AI474501 Prostate .c 2091 to 2412 322 to 1       322/322
(100 %)
0 diff
(100 %id)
AI064874 Liver .c 2100 to 2508 430 to 22       409/430
(95 %)
0 diff
(100 %id)
BE910583 epithelioid carcinoma, Pancreas .c 2120 to 2504 1 to 385       385/385
(100 %)
0 diff
(100 %id)
AA658042   .c 2177 to 2508 344 to 13       332/344
(96 %)
0 diff
(100 %id)
FN123982 breast carcinoma .c 2186 to 2302 117 to 1     Submitted on the opposite strand 117/117
(100 %)
0 diff
(100 %id)
F03044 brain, total brain .c 2227 to 2507 281 to 1       281/281
(100 %)
0 diff
(100 %id)
FN054050 breast carcinoma .c 2299 to 2370 72 to 1     Submitted on the opposite strand 72/74
(97 %)
0 diff
(100 %id)
BY998891   .c 2319 to 2508 1 to 190     Submitted on the opposite strand 190/192
(98 %)
1 diff
(99.5 %id)
BY999439   .c 2319 to 2508 1 to 190     Submitted on the opposite strand 190/192
(98 %)
1 diff
(99.5 %id)
D11624 Liver .c 2319 to 2507 1 to 189       189/189
(100 %)
0 diff
(100 %id)
D12291 Liver .c 2319 to 2507 1 to 189       189/189
(100 %)
0 diff
(100 %id)
AI950375 2 pooled tumors (clear cell type), Kidney .d 1 to 788 789 to 4 Y3S N4P I5F K6N L7Y ...     786/789
(99 %)
12 diff
(98.5 %id)
BU753533 placenta .d 7 to 687 700 to 18   tiling clone, AAA   683/683
(100 %)
2 diff
(99.8 %id)
BQ772829 Chondrosarcoma Cell line .d 60 to 784 741 to 19   AAA   725/723
(100 %)
3 diff
(99.6 %id)
AA376864 small intestine .d 157 to 483 1 to 327       327/327
(100 %)
1 diff
(99.7 %id)
AA129930 uterus .d 161 to 437 1 to 280   fully sequenced,   280/280
(100 %)
0 diff
(100 %id)
BQ012216 placenta .d 225 to 687 481 to 19   AAA   463/467
(99 %)
0 diff
(100 %id)
AA129931 uterus .d 407 to 784 379 to 1   fully sequenced,   379/379
(100 %)
0 diff
(100 %id)
DA960407 Spleen .d 443 to 996 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
AK091841 lung .d 553 to 2784 1 to 2232   tiling clone, available from FLJ,   2232/2232
(100 %)
1 diff
(100.0 %id)
DA586526 lung .d 554 to 1081 2 to 530   capped   529/529
(100 %)
1 diff
(99.9 %id)
AI826046 lymph node, lymphoma, follicular mixed small and largecell .d 585 to 790 221 to 16   AAA   206/206
(100 %)
2 diff
(99.1 %id)
FN144563 breast carcinoma .d 722 to 783 1 to 62       62/63
(98 %)
2 diff
(96.9 %id)
DA151032 amygdala .d 723 to 1295 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA569318 whole embryo, mainly head .d 1075 to 1842 2 to 769   capped   768/768
(100 %)
4 diff
(99.5 %id)
AU144643 whole embryo, mainly head .d 2124 to 2688 565 to 1       565/570
(99 %)
10 diff
(98.3 %id)
DB319432 lung .d 2240 to 2784 545 to 1       545/545
(100 %)
0 diff
(100 %id)
BQ774638 Bone, Human Chondrosarcoma Cell Line .e 1 to 783 798 to 19 S5L A6L V7S M8W E9S ... tiling clone, AAA   780/780
(100 %)
3 diff
(99.7 %id)
CN412037 embryonic stem cells, DMSO-treated H9 cellline .f 1 to 348 1 to 348   tiling clone,   348/348
(100 %)
1 diff
(99.8 %id)
DB521152 testis .f 339 to 769 1 to 431   tiling clone, Submitted on the opposite strand 431/431
(100 %)
1 diff
(99.8 %id)
DA612115   .g 1 to 562 2 to 564 R47E P48T V49C T50N P51A ... tiling clone, capped   563/563
(100 %)
1 diff
(99.9 %id)
DA349445 substantia nigra .h 1 to 559 2 to 560   tiling clone, capped   559/559
(100 %)
0 diff
(100 %id)
CB114410 Liver .h 58 to 529 1 to 472       472/472
(100 %)
0 diff
(100 %id)
BE697482 colon .h 139 to 561 458 to 36       423/458
(92 %)
15 diff
(96.8 %id)
BE697487 colon .h 148 to 599 453 to 4       450/453
(99 %)
0 diff
(100 %id)
TI_149287598   .h 388 to 1197 861 to 64   tiling clone, AAA   798/1060
(75 %)
19 diff
(98.3 %id)
BM972812 lung .h 520 to 1197 695 to 19   tiling clone, AAA   677/677
(100 %)
4 diff
(99.5 %id)
DA191075 amygdala .h 716 to 1239 2 to 525   tiling clone, capped   524/524
(100 %)
0 diff
(100 %id)
BQ951434 leiomyosarcoma, uterus .i 1 to 884 1 to 893 exact tiling clone,   893/894
(99 %)
30 diff
(96.7 %id)
BF574806 muscle (skeletal) .j-u 1 to 674 1 to 678 exact tiling clone,   678/906
(74 %)
47 diff
(94.9 %id)
400 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI