cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
AF202331 | .d | 273 to 493 | 1 to 221 | 221/223 (99 %) | 4 diff (98.3 %id) | ||||
AA353038 | .d | 198 to 384 | 1 to 187 | 187/322 (58 %) | 6 diff (98.2 %id) | ||||
AA368986 | placenta | .h | 37 to 349 | 1 to 313 | 313/313 (100 %) | 0 diff (100 %id) | |||
AA670492 | .d | 396 to 698 | 1 to 302 | 302/302 (100 %) | 4 diff (98.7 %id) | ||||
AV701120 | adrenal gland | .d | 375 to 654 | 91 to 369 | 279/370 (75 %) | 2 diff (99.5 %id) | |||
BP198340 | adrenal gland | .d | 28 to 610 | 1 to 583 | exact | 583/583 (100 %) | 1 diff (99.9 %id) | ||
BP198514 | adrenal gland | .d | 17 to 599 | 1 to 583 | exact | 583/583 (100 %) | 1 diff (99.9 %id) | ||
AW225341 | .d | 443 to 695 | 251 to 1 | 251/251 (100 %) | 5 diff (98.1 %id) | ||||
AW363134 | colon | .e-u | 2362 to 2938 | 580 to 1 | tiling clone, | 580/580 (100 %) | 14 diff (97.6 %id) | ||
AW368694 | head_neck | .c | 33 to 218 | 1 to 186 | 186/193 (96 %) | 2 diff (99.0 %id) | |||
AW955899 | .h | 38 to 536 | 1 to 499 | AAA | 499/499 (100 %) | 0 diff (100 %id) | |||
AW970445 | .d | 83 to 549 | 1 to 468 | 468/468 (100 %) | 13 diff (97.3 %id) | ||||
AY034104 | .g | 1 to 295 | 1 to 295 | F33S | tiling clone, AAA | Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) | 295/295 (100 %) | 1 diff (99.7 %id) | |
BC031331 | Skin, melanoma, amelanotic | .d | 10 to 699 | 1 to 690 | G17V | available from MGC, AAA | 690/690 (100 %) | 1 diff (99.9 %id) | |
BE695889 | colon | .d | 375 to 594 | 41 to 260 | 220/266 (82 %) | 7 diff (97.4 %id) | |||
BF378717 | uterus | .d | 252 to 542 | 26 to 316 | 291/316 (92 %) | 9 diff (97.2 %id) | |||
BF379100 | uterus_tumor | .a | 815 to 1075 | 286 to 27 | tiling clone, | 260/286 (90 %) | 0 diff (100 %id) | ||
BF764960 | colon_est | .d | 23 to 437 | 5 to 419 | G8V P12F G17V | 415/419 (99 %) | 7 diff (98.4 %id) | ||
BF944449 | nervous_normal | .d | 251 to 616 | 92 to 457 | 366/464 (78 %) | 14 diff (97.0 %id) | |||
BG461940 | .d | 247 to 697 | 1 to 449 | AAA | 449/449 (100 %) | 26 diff (94.3 %id) | |||
BQ752489 | Prostate | .d | 264 to 699 | 447 to 12 | AAA | Submitted on the opposite strand | 436/436 (100 %) | 1 diff (99.8 %id) | |
BX112032 | .h | 3 to 530 | 1 to 528 | tiling clone, AAA | 528/528 (100 %) | 0 diff (100 %id) | |||
CD693537 | normal nasopharynx | .h | 66 to 536 | 23 to 492 | AAA | 470/492 (95 %) | 10 diff (98.0 %id) | ||
DA460322 | tongue, tumor tissue | .e-u | 415 to 956 | 2 to 543 | tiling clone, to resequence, capped | 542/542 (100 %) | 0 diff (100 %id) | ||
DB314528 | tongue, tumor tissue | .e-u | 2202 to 2753 | 552 to 1 | exact | to resequence, | 552/552 (100 %) | 1 diff (99.9 %id) | |
CU449215 | epidermis | .d | 249 to 633 | 17 to 401 | 385/410 (93 %) | 10 diff (97.6 %id) | |||
CU452865 | epidermis | .d | 249 to 633 | 394 to 10 | Submitted on the opposite strand | 385/410 (93 %) | 0 diff (100 %id) | ||
EC455867 | Prostate | .d | 608 to 698 | 92 to 4 | 89/92 (96 %) | 0 diff (100 %id) | |||
EC507582 | Prostate | .d | 488 to 580 | 1 to 93 | 93/93 (100 %) | 4 diff (95.7 %id) | |||
EC514522 | Prostate | .d | 423 to 522 | 1 to 99 | 99/99 (100 %) | 1 diff (99.0 %id) | |||
EL735999 | mixed | .d | 37 to 389 | 1 to 353 | 353/510 (69 %) | 1 diff (99.9 %id) | |||
EL950927 | eyeball | .e-u | 2057 to 2625 | 1 to 569 | exact | 569/569 (100 %) | 3 diff (99.5 %id) | ||
EL951830 | eyeball | .d | 185 to 675 | 1 to 491 | 491/491 (100 %) | 4 diff (99.2 %id) | |||
ES311285 | frontal balding hair, skin | .c | 1 to 173 | 1 to 170 | tiling clone, | 170/170 (100 %) | 3 diff (98.3 %id) | ||
FN093532 | breast carcinoma | .c | 175 to 242 | 1 to 68 | 68/69 (98 %) | 1 diff (98.6 %id) | |||
CD674888 | eye, lens | .d | 11 to 439 | 1 to 429 | G17V | 429/429 (100 %) | 1 diff (99.8 %id) | ||
DB480204 | hippocampus | .d | 2 to 501 | 1 to 500 | Q87K | 500/500 (100 %) | 3 diff (99.4 %id) | ||
DB489029 | hypothalamus | .d | 26 to 471 | 1 to 446 | D55E | 446/446 (100 %) | 5 diff (98.9 %id) | ||
DB497834 | hypothalamus | .d | 9 to 358 | 1 to 350 | 350/350 (100 %) | 4 diff (98.9 %id) | |||
DB568931 | hypothalamus | .d | 205 to 697 | 1 to 493 | Submitted on the opposite strand | 493/495 (99 %) | 2 diff (99.6 %id) | ||
DB498178 | hypothalamus | .d | 2 to 506 | 1 to 505 | A36S | 505/505 (100 %) | 1 diff (99.9 %id) | ||
DB569267 | hypothalamus | .d | 226 to 691 | 1 to 466 | Submitted on the opposite strand | 466/468 (99 %) | 2 diff (99.6 %id) | ||
DB500707 | hypothalamus | .d | 9 to 472 | 1 to 464 | exact | 464/464 (100 %) | 1 diff (99.8 %id) | ||
DB571879 | hypothalamus | .d | 242 to 697 | 1 to 456 | Submitted on the opposite strand | 456/458 (99 %) | 2 diff (99.6 %id) | ||
BQ640428 | eye, retina | .d | 218 to 699 | 523 to 42 | AAA | Submitted on the opposite strand | 482/482 (100 %) | 10 diff (98.0 %id) | |
DB358129 | whole embryo, mainly head | .d | 126 to 699 | 578 to 1 | 578/587 (98 %) | 9 diff (98.5 %id) | |||
R07494 | liver and spleen | .d | 379 to 695 | 322 to 6 | fully sequenced, | 317/322 (98 %) | 0 diff (100 %id) | ||
R07547 | liver and spleen | .d | 69 to 410 | 1 to 348 | fully sequenced, | 348/348 (100 %) | 12 diff (96.6 %id) | ||
H27059 | breast | .d | 170 to 620 | 1 to 454 | 454/456 (99 %) | 11 diff (97.6 %id) | |||
N41692 | placenta | .d | 346 to 694 | 349 to 1 | Submitted on the opposite strand | 349/349 (100 %) | 1 diff (99.8 %id) | ||
AA199605 | .d | 375 to 699 | 348 to 19 | AAA | 330/357 (92 %) | 6 diff (98.4 %id) | |||
AA252085 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .e-u | 2352 to 2754 | 403 to 1 | 403/403 (100 %) | 2 diff (99.6 %id) | |||
AA252137 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .e-u | 1776 to 2005 | 1 to 229 | tiling clone, | 229/230 (99 %) | 3 diff (98.7 %id) | ||
AA400317 | .h | 141 to 532 | 395 to 4 | fully sequenced, | 392/395 (99 %) | 0 diff (100 %id) | |||
AA400632 | .h | 2 to 530 | 1 to 527 | A6R E7R E8K R9G G10A ... | fully sequenced, AAA | 527/527 (100 %) | 4 diff (99.3 %id) | ||
AA468753 | colon | .d | 319 to 695 | 377 to 1 | 377/377 (100 %) | 0 diff (100 %id) | |||
AA676886 | whole brain | .d | 208 to 700 | 494 to 2 | 493/494 (99 %) | 0 diff (100 %id) | |||
AA536076 | colon | .d | 213 to 700 | 487 to 2 | 486/492 (98 %) | 15 diff (97.0 %id) | |||
AA513753 | breast | .d | 156 to 699 | 569 to 28 | AAA | 542/542 (100 %) | 3 diff (99.5 %id) | ||
AA542849 | metastatic prostate bone lesion | .d | 472 to 700 | 33 to 260 | 228/269 (84 %) | 5 diff (98.2 %id) | |||
AA639692 | breast | .d | 310 to 700 | 392 to 2 | 391/392 (99 %) | 0 diff (100 %id) | |||
AA707248 | .d | 393 to 699 | 307 to 1 | Submitted on the opposite strand | 307/307 (100 %) | 2 diff (99.4 %id) | |||
AA633704 | .d | 393 to 694 | 303 to 1 | 303/303 (100 %) | 3 diff (99.1 %id) | ||||
AA740345 | 2 pooled tumors (clear cell type), Kidney | .d | 214 to 694 | 484 to 5 | 480/487 (98 %) | 1 diff (99.8 %id) | |||
AA724081 | pooled | .d | 334 to 700 | 374 to 8 | 367/379 (96 %) | 1 diff (99.8 %id) | |||
AA811357 | germinal center B cell | .d | 166 to 376 | 211 to 1 | 211/211 (100 %) | 2 diff (99.1 %id) | |||
AA838338 | epithelium (cell line), Prostate | .d | 393 to 700 | 309 to 2 | 308/309 (99 %) | 0 diff (100 %id) | |||
AA927473 | pooled | .d | 37 to 494 | 1 to 451 | A2G E14G E15G E16G G17T ... | Submitted on the opposite strand | 451/451 (100 %) | 9 diff (98.1 %id) | |
AA931186 | Kidney | .d | 404 to 700 | 298 to 2 | 297/298 (99 %) | 0 diff (100 %id) | |||
AA978356 | 2 pooled tumors (clear cell type), Kidney | .f | 147 to 603 | 460 to 3 | tiling clone, | 458/460 (99 %) | 0 diff (100 %id) | ||
AA947905 | Kidney, kidney tumor | .d | 393 to 698 | 307 to 1 | 307/307 (100 %) | 1 diff (99.7 %id) | |||
AI017725 | .d | 314 to 700 | 395 to 9 | 387/395 (97 %) | 0 diff (100 %id) | ||||
AI090223 | uterus | .d | 199 to 700 | 504 to 3 | tiling clone, | 502/504 (99 %) | 0 diff (100 %id) | ||
AI128273 | placenta | .d | 341 to 699 | 378 to 20 | AAA | 359/359 (100 %) | 3 diff (99.2 %id) | ||
AI188727 | placenta | .d | 145 to 699 | 568 to 14 | AAA | 555/555 (100 %) | 4 diff (99.3 %id) | ||
AI191303 | lung | .f | 1 to 602 | 605 to 3 | R2G D17N T19R L20* | tiling clone, | 603/605 (99 %) | 6 diff (99.1 %id) | |
AI142293 | .d | 39 to 407 | 14 to 378 | fully sequenced, | 365/378 (96 %) | 8 diff (97.9 %id) | |||
AI148002 | .d | 346 to 699 | 366 to 13 | fully sequenced, AAA | 354/354 (100 %) | 3 diff (99.2 %id) | |||
AI336523 | adenocarcinoma, colon | .d | 278 to 699 | 433 to 12 | AAA | 422/422 (100 %) | 1 diff (99.8 %id) | ||
AI432454 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .d | 7 to 506 | 1 to 501 | R91K K92E T93N L94P Q95S ... | Submitted on the opposite strand | 501/501 (100 %) | 1 diff (99.9 %id) | |
AI436367 | B-cell, chronic lymphotic leukemia | .d | 35 to 555 | 1 to 521 | exact | Submitted on the opposite strand | 521/521 (100 %) | 0 diff (100 %id) | |
AI500369 | anaplastic oligodendroglioma, brain | .d | 375 to 699 | 352 to 28 | AAA | 325/326 (99 %) | 5 diff (98.5 %id) | ||
AI554783 | anaplastic oligodendroglioma, brain | .d | 54 to 506 | 1 to 453 | Submitted on the opposite strand | 453/453 (100 %) | 0 diff (100 %id) | ||
AI797479 | pooled | .d | 145 to 699 | 570 to 16 | AAA | 555/555 (100 %) | 6 diff (99.0 %id) | ||
AI879456 | colon | .d | 333 to 700 | 372 to 5 | 368/372 (98 %) | 0 diff (100 %id) | |||
AI833007 | colon | .d | 199 to 699 | 501 to 1 | 501/501 (100 %) | 0 diff (100 %id) | |||
AI886832 | anaplastic oligodendroglioma, brain | .d | 60 to 483 | 1 to 424 | Submitted on the opposite strand | 424/424 (100 %) | 0 diff (100 %id) | ||
AI886932 | anaplastic oligodendroglioma, brain | .d | 414 to 700 | 281 to 1 | 281/281 (100 %) | 9 diff (96.8 %id) | |||
AI815728 | brain, frontal lobe | .d | 1 to 377 | 24 to 400 | fully sequenced, | 378/400 (94 %) | 7 diff (98.3 %id) | ||
AI815926 | brain, frontal lobe | .d | 277 to 377 | 101 to 1 | fully sequenced, | 101/101 (100 %) | 0 diff (100 %id) | ||
AW081785 | pooled | .d | 7 to 521 | 1 to 516 | G17V | Submitted on the opposite strand | 516/516 (100 %) | 2 diff (99.7 %id) | |
BE276764 | melanotic melanoma, skin | .c | 1 to 613 | 1 to 613 | G17V | tiling clone, | 613/621 (98 %) | 10 diff (98.4 %id) | |
BE615920 | adenocarcinoma, Pancreas | .d | 265 to 693 | 1 to 429 | 429/429 (100 %) | 4 diff (99.1 %id) | |||
BE408046 | choriocarcinoma, placenta | .d | 265 to 696 | 1 to 432 | 432/567 (76 %) | 1 diff (99.9 %id) | |||
BE910607 | epithelioid carcinoma, Pancreas | .d | 59 to 687 | 1 to 630 | 630/632 (99 %) | 4 diff (99.4 %id) | |||
BF025828 | melanotic melanoma, skin | .c | 1 to 590 | 1 to 590 | G17V | tiling clone, | 590/1098 (53 %) | 14 diff (98.8 %id) | |
BF107426 | placenta | .d | 47 to 632 | 1 to 584 | 584/584 (100 %) | 26 diff (95.6 %id) | |||
BF237693 | leiomyosarcoma cell line, uterus | .d | 15 to 659 | 1 to 660 | R40E L41V P42A L43S A44G ... | 660/663 (99 %) | 30 diff (95.5 %id) | ||
BF237493 | leiomyosarcoma cell line, uterus | .d | 15 to 622 | 1 to 608 | exact | 608/608 (100 %) | 0 diff (100 %id) | ||
BF978324 | melanotic melanoma, high MDR, skin | .i | 468 to 988 | 1 to 528 | tiling clone, | 528/995 (53 %) | 13 diff (98.7 %id) | ||
BG491874 | amelanotic melanoma, cell line, skin | .d | 9 to 654 | 649 to 1 | A7G G8R S9K G10R T11D ... | 649/649 (100 %) | 8 diff (98.8 %id) | ||
BG683544 | brain, neuroblastoma, cell line | .d | 82 to 651 | 571 to 1 | 571/574 (99 %) | 7 diff (98.8 %id) | |||
BG740141 | skin | .a | 1 to 760 | 1 to 760 | exact | tiling clone, | 760/760 (100 %) | 1 diff (99.9 %id) | |
BG760830 | melanotic melanoma, high MDR (cell line), skin | .b | 1 to 406 | 1 to 407 | exact | tiling clone, | 407/811 (50 %) | 3 diff (99.7 %id) | |
BI667558 | brain, hypothalamus | .d | 1 to 692 | 5 to 695 | A36S K90T | AAA | 695/695 (100 %) | 11 diff (98.5 %id) | |
BM009306 | amelanotic melanoma, cell line, skin | .d | 9 to 676 | 1 to 668 | G17V | 668/673 (99 %) | 11 diff (98.4 %id) | ||
BM045636 | carcinoma, cell line, Prostate | .j-u | 1 to 613 | 1 to 622 | R80Q A81S R83A I84N N85K ... | tiling clone, | 622/862 (72 %) | 25 diff (97.1 %id) | |
BM809080 | amelanotic melanoma, cell line, skin | .d | 6 to 602 | 22 to 618 | exact | 597/1203 (49 %) | 14 diff (98.9 %id) | ||
BM555016 | amelanotic melanoma, cell line, skin | .d | 5 to 701 | 21 to 717 | G17V | tiling clone, AAA | 697/717 (97 %) | 8 diff (98.9 %id) | |
BM551010 | amelanotic melanoma, cell line, skin | .d | 1 to 699 | 18 to 716 | G17V | AAA | 706/716 (98 %) | 8 diff (98.9 %id) | |
BM924454 | pooled colon, kidney, stomach | .d | 15 to 586 | 24 to 600 | G17V | 577/1284 (44 %) | 16 diff (98.8 %id) | ||
BQ233876 | epithelioid carcinoma, Pancreas | .d | 12 to 697 | 1 to 686 | exact | 686/903 (75 %) | 2 diff (99.8 %id) | ||
BU594966 | mixed (pool of 40 RNAs) | .d | 1 to 698 | 5 to 708 | G17V | 708/853 (83 %) | 26 diff (97.0 %id) | ||
BU595433 | mixed (pool of 40 RNAs) | .d | 16 to 699 | 1 to 684 | G17V | 684/770 (88 %) | 5 diff (99.4 %id) | ||
BU597500 | mixed (pool of 40 RNAs) | .d | 1 to 631 | 4 to 640 | G17V | 640/879 (72 %) | 15 diff (98.3 %id) | ||
BQ954219 | leiomyosarcoma, uterus | .d | 66 to 689 | 88 to 714 | 627/1071 (58 %) | 18 diff (98.4 %id) | |||
BU520765 | leiomyosarcoma, uterus | .d | 1 to 693 | 3 to 695 | exact | 695/695 (100 %) | 6 diff (99.2 %id) | ||
CA866724 | Pancreas, Purified pancreatic islet | .e-u | 1975 to 2426 | 1 to 452 | tiling clone, | 452/452 (100 %) | 0 diff (100 %id) | ||
CA866977 | Pancreas, Purified pancreatic islet | .e-u | 2185 to 2748 | 572 to 9 | exact | 564/572 (98 %) | 0 diff (100 %id) | ||
CK903090 | Pancreas, Purified pancreatic islet | .e-u | 1996 to 2509 | 1 to 514 | Submitted on the opposite strand | 514/514 (100 %) | 3 diff (99.5 %id) | ||
CK903091 | Pancreas, Purified pancreatic islet | .e-u | 2186 to 2750 | 582 to 18 | exact | tiling clone, AAA | Submitted on the opposite strand | 565/565 (100 %) | 0 diff (100 %id) |
CA454961 | .d | 63 to 699 | 1 to 637 | AAA | 637/637 (100 %) | 0 diff (100 %id) | |||
BU953216 | mixed (pool of 40 RNAs) | .h | 1 to 528 | 1 to 528 | exact | 528/778 (67 %) | 6 diff (99.3 %id) | ||
BU963250 | mixed (pool of 40 RNAs) | .d | 1 to 383 | 5 to 387 | tiling clone, | 387/946 (40 %) | 10 diff (99.0 %id) | ||
CD107195 | brain, Pituitary | .d | 45 to 699 | 1 to 655 | 655/656 (99 %) | 2 diff (99.7 %id) | |||
CF130203 | Chondrosarcoma Lung Metastasis cell lines, lung | .d | 356 to 693 | 1 to 338 | AAA | 338/338 (100 %) | 0 diff (100 %id) | ||
TI_44343517 | .d | 1 to 692 | 121 to 811 | A36S K90T | AAA | 699/811 (86 %) | 12 diff (98.6 %id) | ||
TI_59384038 | .d | 9 to 676 | 63 to 730 | G17V | 668/673 (99 %) | 11 diff (98.4 %id) | |||
BP429067 | .d | 190 to 528 | 1 to 339 | 339/339 (100 %) | 0 diff (100 %id) | ||||
BP431280 | .d | 176 to 530 | 1 to 355 | 355/355 (100 %) | 3 diff (99.2 %id) | ||||
NM_019896.2 | .d | 5 to 706 | 1 to 702 | exact | RefSeq, | 702/710 (98 %) | 5 diff (99.3 %id) | ||
CT003080 | T-Lymphocytes | .d | 40 to 699 | 1 to 660 | AAA | 660/660 (100 %) | 1 diff (99.9 %id) | ||
F26406 | pectoral muscle (after mastectomy) | .d | 9 to 416 | 10 to 416 | R13E E14R E15R E16R G17Y ... | 407/416 (97 %) | 8 diff (98.1 %id) | ||
F34689 | pectoral muscle (after mastectomy) | .d | 511 to 700 | 1 to 190 | 190/235 (80 %) | 1 diff (99.6 %id) | |||
U75998 | skin | .d | 387 to 626 | 275 to 38 | 238/279 (85 %) | 0 diff (100 %id) | |||
DN990598 | brain, whole brain | .d | 9 to 660 | 1 to 654 | K47F L73P F74V V75C E76G ... | 654/654 (100 %) | 14 diff (97.9 %id) | ||
DB146929 | thymus | .e-u | 592 to 1070 | 2 to 480 | tiling clone, capped | 479/479 (100 %) | 0 diff (100 %id) | ||
TI_149285004 | .d | 50 to 699 | 728 to 86 | AAA | 643/1122 (57 %) | 11 diff (99.1 %id) | |||
TI_154192144 | .d | 354 to 693 | 42 to 381 | AAA | 340/340 (100 %) | 0 diff (100 %id) | |||
TI_157601828 | .d | 308 to 699 | 476 to 85 | AAA | 392/903 (43 %) | 2 diff (99.8 %id) | |||
BQ011449 | placenta | .d | 236 to 699 | 482 to 19 | AAA | 464/466 (99 %) | 4 diff (99.2 %id) | ||
CF529348 | placenta | .d | 308 to 699 | 410 to 19 | AAA | 392/399 (98 %) | 2 diff (99.5 %id) | ||
BQ013037 | placenta | .d | 239 to 699 | 479 to 19 | AAA | 461/461 (100 %) | 0 diff (100 %id) | ||
BM984649 | lung | .d | 100 to 699 | 612 to 19 | AAA | 594/594 (100 %) | 5 diff (99.2 %id) | ||
BM714678 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 72 to 289 | 1 to 218 | fully sequenced, | 218/218 (100 %) | 0 diff (100 %id) | ||
BU739305 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 259 to 699 | 459 to 19 | fully sequenced, AAA | 441/441 (100 %) | 1 diff (99.8 %id) | ||
BM677848 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 304 to 699 | 414 to 19 | fully sequenced, AAA | 396/396 (100 %) | 1 diff (99.8 %id) | ||
BM725423 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 64 to 365 | 1 to 302 | fully sequenced, | 302/302 (100 %) | 3 diff (99.1 %id) | ||
BM727074 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 41 to 365 | 1 to 325 | fully sequenced, | 325/325 (100 %) | 0 diff (100 %id) | ||
BU740914 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 304 to 692 | 407 to 19 | fully sequenced, AAA | 389/389 (100 %) | 2 diff (99.5 %id) | ||
BM679759 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .a | 529 to 971 | 461 to 19 | tiling clone, AAA | 443/457 (96 %) | 1 diff (99.8 %id) | ||
BM682293 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 346 to 699 | 371 to 19 | fully sequenced, AAA | 353/353 (100 %) | 1 diff (99.8 %id) | ||
BM723287 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 271 to 699 | 1 to 429 | fully sequenced, AAA | 429/429 (100 %) | 0 diff (100 %id) | ||
BM929605 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 63 to 693 | 1 to 631 | AAA | 631/631 (100 %) | 0 diff (100 %id) | ||
CA307504 | Alveolar Macrophage, lung | .d | 36 to 693 | 676 to 19 | A5T G17V | AAA | 658/675 (97 %) | 3 diff (99.6 %id) | |
TI_151739992 | .d | 248 to 699 | 563 to 108 | AAA | 456/1013 (45 %) | 7 diff (99.4 %id) | |||
TI_151785438 | .a | 529 to 971 | 107 to 548 | 442/552 (80 %) | 6 diff (99.0 %id) | ||||
DB261033 | uterus | .i | 1 to 561 | 2 to 562 | exact | tiling clone, capped | 561/561 (100 %) | 2 diff (99.7 %id) | |
DB285419 | uterus | .e-u | 1 to 540 | 2 to 542 | tiling clone, capped | 541/541 (100 %) | 1 diff (99.9 %id) | ||
DA443047 | tongue, tumor tissue | .e-u | 1996 to 2509 | 1 to 514 | capped | This clone was ignored | 514/514 (100 %) | 3 diff (99.5 %id) | |
DB313815 | tongue, tumor tissue | .e-u | 2186 to 2750 | 582 to 18 | tiling clone, | This clone was ignored | 565/565 (100 %) | 0 diff (100 %id) | |
AI970899 | Prostate | .e-u | 2186 to 2750 | 582 to 18 | tiling clone, | This clone was ignored | 565/565 (100 %) | 0 diff (100 %id) | |
BI599890 | brain, hypothalamus | .d | 63 to 699 | 1 to 637 | AAA | Suspected internal deletion, this clone was ignored | 637/637 (100 %) | 0 diff (100 %id) | |
TI_45212234 | .h | 1 to 528 | 1 to 528 | AAA | Suspected internal deletion, this clone was ignored | 528/778 (67 %) | 6 diff (99.3 %id) | ||
DA902900 | .d | 1 to 383 | 5 to 387 | tiling clone, capped | This clone was ignored | 387/946 (40 %) | 10 diff (99.0 %id) | ||
BM688755 | eye, eye anterior segment | .d | 45 to 699 | 1 to 655 | Suspected internal deletion, this clone was ignored | 655/656 (99 %) | 2 diff (99.7 %id) | ||
BM687694 | eye, eye anterior segment | .d | 45 to 699 | 1 to 655 | Suspected internal deletion, this clone was ignored | 655/656 (99 %) | 2 diff (99.7 %id) | ||
TI_151738315 | .d | 356 to 693 | 1 to 338 | AAA | Suspected internal deletion, this clone was ignored | 338/338 (100 %) | 0 diff (100 %id) | ||
CF130203 | Chondrosarcoma Lung Metastasis cell lines, lung | .d | 356 to 693 | 1 to 338 | AAA | 338/338 (100 %) | 0 diff (100 %id) | ||
TI_44343517 | .d | 1 to 692 | 121 to 811 | A36S K90T | AAA | 699/811 (86 %) | 12 diff (98.6 %id) | ||
TI_59384038 | .d | 9 to 676 | 63 to 730 | G17V | 668/673 (99 %) | 11 diff (98.4 %id) | |||
BP429067 | .d | 190 to 528 | 1 to 339 | 339/339 (100 %) | 0 diff (100 %id) | ||||
BP431280 | .d | 176 to 530 | 1 to 355 | 355/355 (100 %) | 3 diff (99.2 %id) | ||||
NM_019896.2 | .d | 5 to 706 | 1 to 702 | exact | RefSeq, | 702/710 (98 %) | 5 diff (99.3 %id) | ||
CT003080 | T-Lymphocytes | .d | 40 to 699 | 1 to 660 | AAA | 660/660 (100 %) | 1 diff (99.9 %id) | ||
F26406 | pectoral muscle (after mastectomy) | .d | 9 to 416 | 10 to 416 | R13E E14R E15R E16R G17Y ... | 407/416 (97 %) | 8 diff (98.1 %id) | ||
F34689 | pectoral muscle (after mastectomy) | .d | 511 to 700 | 1 to 190 | 190/235 (80 %) | 1 diff (99.6 %id) | |||
U75998 | skin | .d | 387 to 626 | 275 to 38 | 238/279 (85 %) | 0 diff (100 %id) | |||
DN990598 | brain, whole brain | .d | 9 to 660 | 1 to 654 | K47F L73P F74V V75C E76G ... | 654/654 (100 %) | 14 diff (97.9 %id) | ||
DN990598 | brain, whole brain | .d | 9 to 660 | 1 to 654 | K47F L73P F74V V75C E76G ... | 654/654 (100 %) | 14 diff (97.9 %id) | ||
DB146929 | thymus | .e-u | 592 to 1070 | 2 to 480 | tiling clone, capped | 479/479 (100 %) | 0 diff (100 %id) | ||
TI_149285004 | .d | 50 to 699 | 728 to 86 | AAA | 643/1122 (57 %) | 11 diff (99.1 %id) | |||
TI_154192144 | .d | 354 to 693 | 42 to 381 | AAA | 340/340 (100 %) | 0 diff (100 %id) | |||
TI_157601828 | .d | 308 to 699 | 476 to 85 | AAA | 392/903 (43 %) | 2 diff (99.8 %id) | |||
BQ011449 | placenta | .d | 236 to 699 | 482 to 19 | AAA | 464/466 (99 %) | 4 diff (99.2 %id) | ||
CF529348 | placenta | .d | 308 to 699 | 410 to 19 | AAA | 392/399 (98 %) | 2 diff (99.5 %id) | ||
BQ013037 | placenta | .d | 239 to 699 | 479 to 19 | AAA | 461/461 (100 %) | 0 diff (100 %id) | ||
BM984649 | lung | .d | 100 to 699 | 612 to 19 | AAA | 594/594 (100 %) | 5 diff (99.2 %id) | ||
BM714678 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 72 to 289 | 1 to 218 | fully sequenced, | 218/218 (100 %) | 0 diff (100 %id) | ||
BM714678 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 72 to 289 | 1 to 218 | fully sequenced, | 218/218 (100 %) | 0 diff (100 %id) | ||
BU739305 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 259 to 699 | 459 to 19 | fully sequenced, AAA | 441/441 (100 %) | 1 diff (99.8 %id) | ||
BU739305 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 259 to 699 | 459 to 19 | fully sequenced, AAA | 441/441 (100 %) | 1 diff (99.8 %id) | ||
BM677848 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 304 to 699 | 414 to 19 | fully sequenced, AAA | 396/396 (100 %) | 1 diff (99.8 %id) | ||
BM677848 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 304 to 699 | 414 to 19 | fully sequenced, AAA | 396/396 (100 %) | 1 diff (99.8 %id) | ||
BM725423 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 64 to 365 | 1 to 302 | fully sequenced, | 302/302 (100 %) | 3 diff (99.1 %id) | ||
BM725423 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 64 to 365 | 1 to 302 | fully sequenced, | 302/302 (100 %) | 3 diff (99.1 %id) | ||
BM727074 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 41 to 365 | 1 to 325 | fully sequenced, | 325/325 (100 %) | 0 diff (100 %id) | ||
BM727074 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 41 to 365 | 1 to 325 | fully sequenced, | 325/325 (100 %) | 0 diff (100 %id) | ||
BU740914 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 304 to 692 | 407 to 19 | fully sequenced, AAA | 389/389 (100 %) | 2 diff (99.5 %id) | ||
BU740914 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 304 to 692 | 407 to 19 | fully sequenced, AAA | 389/389 (100 %) | 2 diff (99.5 %id) | ||
BM679759 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .a | 529 to 971 | 461 to 19 | tiling clone, AAA | 443/457 (96 %) | 1 diff (99.8 %id) | ||
BM679759 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .a | 529 to 971 | 461 to 19 | tiling clone, AAA | 443/457 (96 %) | 1 diff (99.8 %id) | ||
BM682293 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 346 to 699 | 371 to 19 | fully sequenced, AAA | 353/353 (100 %) | 1 diff (99.8 %id) | ||
BM682293 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 346 to 699 | 371 to 19 | fully sequenced, AAA | 353/353 (100 %) | 1 diff (99.8 %id) | ||
BM723287 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 271 to 699 | 1 to 429 | fully sequenced, AAA | 429/429 (100 %) | 0 diff (100 %id) | ||
BM723287 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 271 to 699 | 1 to 429 | fully sequenced, AAA | 429/429 (100 %) | 0 diff (100 %id) | ||
BM929605 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 63 to 693 | 1 to 631 | AAA | 631/631 (100 %) | 0 diff (100 %id) | ||
BM929605 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 63 to 693 | 1 to 631 | AAA | 631/631 (100 %) | 0 diff (100 %id) | ||
CA307504 | Alveolar Macrophage, lung | .d | 36 to 693 | 676 to 19 | A5T G17V | AAA | 658/675 (97 %) | 3 diff (99.6 %id) | |
CA307504 | Alveolar Macrophage, lung | .d | 36 to 693 | 676 to 19 | A5T G17V | AAA | 658/675 (97 %) | 3 diff (99.6 %id) | |
TI_151739992 | .d | 248 to 699 | 563 to 108 | AAA | 456/1013 (45 %) | 7 diff (99.4 %id) | |||
TI_151785438 | .a | 529 to 971 | 107 to 548 | 442/552 (80 %) | 6 diff (99.0 %id) | ||||
DB261033 | uterus | .i | 1 to 561 | 2 to 562 | exact | tiling clone, capped | 561/561 (100 %) | 2 diff (99.7 %id) | |
DB285419 | uterus | .e-u | 1 to 540 | 2 to 542 | tiling clone, capped | 541/541 (100 %) | 1 diff (99.9 %id) |
? | Gene Summary | Gene on genome | mRNA:.a, .b, .c, .d, .e-u, .f, .g, .h, .i, .j-u | Alternative mRNAs features, proteins, introns, exons, sequences | Expression Tissue | Function, regulation, related genes CI |