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Gene PIK3CATABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
141 supporting clones for gene PIK3CA back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AW293828   .a 1 to 199 1 to 199   tiling clone, Submitted on the opposite strand 199/234
(85 %)
5 diff
(97.9 %id)
BX484734   .a 116 to 455 1 to 340   tiling clone,   340/340
(100 %)
1 diff
(99.8 %id)
NM_006218.2   .a 117 to 3823 1 to 3707 exact RefSeq, AAA   3707/3707
(100 %)
0 diff
(100 %id)
AK292940 trachea .a 159 to 3522 1 to 3364 M30L I391M     3364/3364
(100 %)
3 diff
(100.0 %id)
DC417540 trachea .a 159 to 744 1 to 587       587/587
(100 %)
2 diff
(99.7 %id)
TI_1243017787   .a 188 to 1320 39 to 1165       1127/1213
(92 %)
34 diff
(97.2 %id)
TI_1243017789   .a 188 to 1413 37 to 1250       1216/1250
(97 %)
37 diff
(97.1 %id)
TI_1243023111   .a 188 to 1330 43 to 1175       1133/1248
(90 %)
22 diff
(98.3 %id)
TI_1243023497   .a 188 to 1396 59 to 1262     Submitted on the opposite strand 1204/1270
(94 %)
37 diff
(97.1 %id)
BC113601 Lung, PCR rescued clones .a 197 to 3556 1 to 3360 exact     3360/3360
(100 %)
0 diff
(100 %id)
BC113603 Lung, PCR rescued clones .a 197 to 3562 1 to 3366 exact tiling clone,   3366/3366
(100 %)
0 diff
(100 %id)
Z29090   .a 262 to 3687 1 to 3424 I43V N170H K187R M286K L287M ... tiling clone,   3424/3424
(100 %)
41 diff
(98.9 %id)
U79143   .a 274 to 3480 1 to 3207 exact     3207/3207
(100 %)
5 diff
(99.9 %id)
CX869834 embryonic stem .a 293 to 695 1 to 403       403/403
(100 %)
4 diff
(99.1 %id)
DB443619 testis .a 330 to 767 1 to 438       438/438
(100 %)
3 diff
(99.4 %id)
BX473473   .a 353 to 760 1 to 408       408/408
(100 %)
3 diff
(99.3 %id)
BP388720 pancreatic islet .a 404 to 955 1 to 552     Submitted on the opposite strand 552/552
(100 %)
1 diff
(99.9 %id)
AK302608 testis .a 439 to 3592 1 to 3154       3154/3154
(100 %)
3 diff
(100.0 %id)
DC401351 testis .a 439 to 984 1 to 546       546/546
(100 %)
2 diff
(99.7 %id)
DC403230 testis .a 488 to 1040 1 to 553       553/553
(100 %)
0 diff
(100 %id)
AV693521 hepatocellular carcinoma .a 504 to 1061 1 to 554       554/636
(87 %)
6 diff
(99.1 %id)
DC429375   .a 523 to 1059 1 to 537       537/543
(98 %)
1 diff
(99.9 %id)
TI_154149180   .a 535 to 1098 62 to 638       577/837
(68 %)
46 diff
(94.6 %id)
AA331546 Embryo, 8 weeks .a 538 to 789 1 to 252       252/252
(100 %)
0 diff
(100 %id)
BU429448 lymph .a 542 to 742 8 to 208       201/208
(96 %)
6 diff
(97.2 %id)
DC330039 hippocampus .a 577 to 1157 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DC320779 brain .a 639 to 1182 1 to 544       544/544
(100 %)
0 diff
(100 %id)
TI_1243020035   .a 654 to 1801 10 to 1151       1142/1272
(89 %)
25 diff
(98.1 %id)
BG391265 embryonal carcinoma, cell line, testis .a 718 to 1407 1 to 685       685/844
(81 %)
11 diff
(98.7 %id)
BX491368   .a 767 to 1381 9 to 627       617/627
(98 %)
8 diff
(98.8 %id)
DA538945 Kidney .a 815 to 1397 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA746144   .a 815 to 1370 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
AK297203 brain .a 878 to 3603 1 to 2726   tiling clone,   2726/2726
(100 %)
1 diff
(100.0 %id)
DC350144 brain .a 878 to 1411 1 to 535       535/535
(100 %)
1 diff
(99.9 %id)
BP336348 coronary artery .a 906 to 1491 1 to 587       587/587
(100 %)
1 diff
(99.9 %id)
BU167122 melanotic melanoma, skin .a 955 to 1681 1 to 731       731/883
(82 %)
10 diff
(98.9 %id)
BP225012   .a 1060 to 1641 1 to 582       582/582
(100 %)
5 diff
(99.2 %id)
BP337031 coronary artery .a 1104 to 1685 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP221316 colon .a 1126 to 1704 1 to 579       579/579
(100 %)
1 diff
(99.9 %id)
AA304823 aorta .a 1154 to 1424 1 to 273       273/298
(91 %)
8 diff
(97.4 %id)
BM470620 leiomyosarcoma, uterus .a 1175 to 1937 32 to 797       766/1063
(72 %)
11 diff
(99.0 %id)
BP335698 coronary artery .a 1178 to 1758 1 to 582       582/582
(100 %)
6 diff
(99.0 %id)
DA030664   .a 1179 to 1741 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
TI_1243019647   .a 1179 to 2288 1 to 1113       1113/1274
(87 %)
15 diff
(98.9 %id)
BP328163 prostata .a 1304 to 1880 1 to 582       577/582
(99 %)
9 diff
(98.5 %id)
CD708240 normal nasopharynx .a 1315 to 1455 23 to 165       143/165
(86 %)
9 diff
(94.6 %id)
AL706270 human skeletal muscle .a 1363 to 2111 1 to 750       750/750
(100 %)
1 diff
(99.9 %id)
TI_1243020049   .a 1457 to 2567 8 to 1110       1103/1252
(88 %)
15 diff
(98.9 %id)
BQ228953 embryonal carcinoma, cell line, testis .a 1463 to 2288 1 to 824       824/872
(94 %)
8 diff
(99.1 %id)
DA546052   .a 1559 to 2109 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
TI_1243021487   .a 1666 to 2817 1159 to 18       1142/1265
(90 %)
26 diff
(98.0 %id)
DA971524 synovial membrane tissue from rheumatioidarthritis .a 1739 to 2266 2 to 529   capped   528/528
(100 %)
0 diff
(100 %id)
CN373258 embryonic stem cells, cell lines H1, H7, andH9 .a 1741 to 2434 1 to 695       695/695
(100 %)
3 diff
(99.6 %id)
TI_1243022019   .a 1886 to 2841 14 to 975       962/1005
(95 %)
27 diff
(97.4 %id)
TI_1243022041   .a 1890 to 2637 16 to 765       750/767
(97 %)
8 diff
(99.0 %id)
BQ185978 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1958 to 2310 1 to 353       353/358
(98 %)
1 diff
(99.8 %id)
TI_151730191   .a 1958 to 2310 412 to 60       353/1030
(34 %)
0 diff
(100 %id)
AA229899   .a 1970 to 2359 7 to 396       390/396
(98 %)
6 diff
(98.5 %id)
TI_1243021475   .a 2185 to 3364 1199 to 23       1177/1298
(90 %)
22 diff
(98.4 %id)
AU280420   .a 2244 to 2791 1 to 548       548/548
(100 %)
1 diff
(99.9 %id)
AL694625   .a 2264 to 2505 1 to 243       243/243
(100 %)
1 diff
(99.6 %id)
BG436153 placenta .a 2337 to 2938 1 to 605       605/798
(75 %)
12 diff
(98.5 %id)
BE815880 breast_normal .a 2341 to 2689 1 to 350       350/359
(97 %)
9 diff
(97.5 %id)
BE815686 breast_normal .a 2351 to 2531 17 to 201       185/205
(90 %)
13 diff
(93.7 %id)
BG497751 adenocarcinoma, Prostate .a 2353 to 3104 1 to 752       752/753
(99 %)
11 diff
(98.6 %id)
TI_1243017793   .a 2394 to 3562 1227 to 65       1163/1245
(93 %)
17 diff
(98.7 %id)
TI_1243020043   .a 2450 to 3558 11 to 1114       1104/1223
(90 %)
11 diff
(99.2 %id)
TI_1243023113   .a 2459 to 3562 1160 to 60     Submitted on the opposite strand 1101/1255
(87 %)
11 diff
(99.2 %id)
CB964053 Blood vessels - aorta, basilar and artery .a 2561 to 3215 1 to 671       671/767
(87 %)
23 diff
(97.1 %id)
TI_1243017791   .a 2568 to 3562 1055 to 63       993/1230
(80 %)
2 diff
(99.9 %id)
TI_1243023495   .a 2569 to 3562 1064 to 69       996/1290
(77 %)
8 diff
(99.4 %id)
BE379970 bladder, carcinoma, cell line .a 2601 to 3134 1 to 537       494/601
(82 %)
13 diff
(97.9 %id)
BX503208 Liver .a 2652 to 3156 1 to 505       505/505
(100 %)
2 diff
(99.7 %id)
DA363827 subthalamic nucleus .a 2693 to 3258 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
BF242935 bone marrow, from acute myelogenous leukemia .a 2698 to 3401 1 to 691       691/864
(79 %)
62 diff
(92.9 %id)
BE000279 breast_normal .a 2703 to 2986 25 to 308       284/308
(92 %)
6 diff
(98.1 %id)
AW999771 breast_normal .a 2710 to 2986 36 to 312       277/312
(88 %)
6 diff
(98.1 %id)
BF691754 melanotic melanoma, high MDR, skin .a 2904 to 3623 1 to 717       717/836
(85 %)
26 diff
(96.9 %id)
BQ723308 sympathetic trunk .a 2938 to 3511 1 to 599       599/1094
(54 %)
11 diff
(99.0 %id)
BE565933 bladder, carcinoma, cell line .a 2940 to 3425 8 to 502       497/502
(99 %)
27 diff
(94.7 %id)
BE279196 choriocarcinoma, placenta .a 2959 to 3488 1 to 533       533/533
(100 %)
4 diff
(99.3 %id)
CX751355 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 2986 to 3711 1 to 717       670/717
(93 %)
92 diff
(87.2 %id)
DA189438 amygdala .b 1 to 244 2 to 245   tiling clone, capped   244/244
(100 %)
0 diff
(100 %id)
AA190409   .b 106 to 419 108 to 417       310/417
(74 %)
10 diff
(97.7 %id)
AB210020 brain .b 177 to 3856 1 to 3680 exact tiling clone,   3680/3680
(100 %)
0 diff
(100 %id)
AU129890   .b 944 to 1635 2 to 699   capped   698/751
(92 %)
18 diff
(97.7 %id)
AU134684 placenta .b 2496 to 3191 2 to 705   capped   704/705
(99 %)
11 diff
(98.5 %id)
BU852815 testis .b 2958 to 3736 1 to 784       784/789
(99 %)
14 diff
(98.3 %id)
TI_1243020037   .b 3002 to 3470 1 to 472       472/1253
(37 %)
6 diff
(99.6 %id)
TI_154150332   .b 3010 to 3731 826 to 106   AAA Submitted on the opposite strand 721/722
(99 %)
15 diff
(98.0 %id)
W76227 heart .b 3017 to 3444 1 to 433       433/433
(100 %)
6 diff
(98.7 %id)
AI632172 pooled germ cell tumors .b 3098 to 3731 633 to 1       633/633
(100 %)
5 diff
(99.3 %id)
BG211860   .b 3112 to 3892 1 to 780       780/783
(99 %)
19 diff
(97.6 %id)
AW474670 lymph node, lymphoma, follicular mixed small and largecell .b 3116 to 3729 615 to 4       612/615
(99 %)
0 diff
(100 %id)
D56232   .b 3117 to 3407 292 to 1     Submitted on the opposite strand 292/292
(100 %)
4 diff
(98.7 %id)
BG202441   .b 3139 to 3695 2 to 558       557/735
(75 %)
27 diff
(96.4 %id)
BX108528 melanocyte .b 3141 to 3890 1 to 750       750/750
(100 %)
1 diff
(99.9 %id)
CR746210 melanocyte .b 3141 to 3885 1 to 745       745/746
(99 %)
2 diff
(99.8 %id)
N44819 melanocyte .b 3141 to 3597 1 to 462       462/475
(97 %)
8 diff
(98.4 %id)
N44835 melanocyte .b 3145 to 3382 1 to 238       238/241
(98 %)
2 diff
(99.2 %id)
BE972630 testis .b 3157 to 3851 1 to 696   AAA   696/696
(100 %)
32 diff
(95.5 %id)
BU429294 lymph .b 3164 to 3731 600 to 33   AAA Submitted on the opposite strand 568/568
(100 %)
1 diff
(99.9 %id)
BG189686   .b 3174 to 3463 1 to 290       290/290
(100 %)
7 diff
(97.6 %id)
CN373257 embryonic stem cells, DMSO-treated H9 cellline .b 3200 to 3681 9 to 490       482/490
(98 %)
10 diff
(98.0 %id)
N23534 melanocyte .b 3203 to 3464 1 to 264       264/264
(100 %)
4 diff
(98.5 %id)
AA298585 lung .b 3226 to 3567 1 to 343       343/343
(100 %)
2 diff
(99.5 %id)
AW951459   .b 3227 to 3805 1 to 579       579/579
(100 %)
1 diff
(99.9 %id)
AW772620 Kidney .b 3239 to 3828 598 to 9       590/598
(98 %)
0 diff
(100 %id)
BE811417 amnion_normal .b 3310 to 3502 1 to 193       193/193
(100 %)
5 diff
(97.5 %id)
AU151957   .b 3320 to 3842 525 to 1       525/525
(100 %)
9 diff
(98.3 %id)
DR159520 human embryonic stem cells differentiated toan early endodermal cell type .b 3370 to 4006 673 to 37     Submitted on the opposite strand 637/673
(94 %)
0 diff
(100 %id)
AW445128   .b 3377 to 3731 372 to 18   AAA   355/357
(99 %)
5 diff
(98.6 %id)
N84360   .b 3389 to 3520 1 to 132       132/136
(97 %)
4 diff
(97.1 %id)
W72473 heart .b 3489 to 4009 531 to 1       531/586
(90 %)
17 diff
(97.1 %id)
TI_154166697   .b 3489 to 4006 627 to 106   AAA Submitted on the opposite strand 522/958
(54 %)
0 diff
(100 %id)
AW068262 Bone, Hip .b 3499 to 3877 383 to 5       379/383
(98 %)
0 diff
(100 %id)
AA661803 alveolar rhabdomyosarcoma .b 3519 to 3851 1 to 333       333/333
(100 %)
2 diff
(99.4 %id)
FN131534 breast carcinoma .b 3588 to 3721 126 to 1     Submitted on the opposite strand 126/126
(100 %)
7 diff
(94.5 %id)
AI679006 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 3605 to 4146 542 to 1       542/542
(100 %)
0 diff
(100 %id)
AA837525 epithelium (cell line), Prostate .b 3628 to 4147 521 to 1       521/521
(100 %)
2 diff
(99.7 %id)
CF137283 lymph .b 3639 to 4009 402 to 31   AAA Submitted on the opposite strand 372/374
(99 %)
16 diff
(95.8 %id)
DB372409 placenta .b 3669 to 4146 483 to 1       483/485
(99 %)
18 diff
(96.3 %id)
AA190799   .b 3672 to 4016 373 to 19   AAA   355/361
(98 %)
17 diff
(95.3 %id)
N33289 melanocyte .b 3720 to 4146 427 to 1       427/427
(100 %)
0 diff
(100 %id)
CA310666 Human Lung Epithelial cells, lung .b 3721 to 4346 635 to 17   AAA   619/624
(99 %)
6 diff
(99.1 %id)
AV651586 corresponding non cancerous liver tissue .b 3726 to 4153 1 to 429     Submitted on the opposite strand 429/429
(100 %)
6 diff
(98.7 %id)
AA847833 germinal center B cell .b 3726 to 4156 430 to 1   tiling clone,   430/430
(100 %)
1 diff
(99.8 %id)
AW449412   .b 3740 to 3931 1 to 190     Submitted on the opposite strand 190/190
(100 %)
8 diff
(95.8 %id)
FN133652 breast carcinoma .b 3745 to 3857 113 to 1     Submitted on the opposite strand 113/117
(96 %)
0 diff
(100 %id)
FN166748 breast carcinoma .b 3760 to 3879 1 to 120       120/120
(100 %)
1 diff
(99.2 %id)
AI245465 Kidney .b 3796 to 4146 351 to 1       351/351
(100 %)
1 diff
(99.8 %id)
FN121070 breast carcinoma .b 3856 to 3919 63 to 1     Submitted on the opposite strand 63/63
(100 %)
1 diff
(98.5 %id)
AI628512 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 3857 to 4349 497 to 4       494/497
(99 %)
0 diff
(100 %id)
AA905413 pooled .b 3882 to 4146 265 to 1       265/265
(100 %)
0 diff
(100 %id)
AA229898   .b 3890 to 4147 258 to 1       258/258
(100 %)
1 diff
(99.7 %id)
AA494192 colon .b 3919 to 4145 31 to 257     Submitted on the opposite strand 227/257
(88 %)
6 diff
(97.7 %id)
DB508565 testis .b 3944 to 4351 1 to 409   tiling clone, Submitted on the opposite strand 409/409
(100 %)
4 diff
(99.1 %id)
BM968292 lung, Primary Lung Epithelial Cells .b 3978 to 4146 1 to 169     Submitted on the opposite strand 169/171
(98 %)
5 diff
(97.1 %id)
D60274   .b 4003 to 4323 320 to 1       320/327
(97 %)
3 diff
(99.1 %id)
BX437220 thymus .c 1 to 746 1 to 746   tiling clone,   746/746
(100 %)
1 diff
(99.9 %id)
BX437219 thymus .c 982 to 1807 826 to 1   tiling clone,   826/826
(100 %)
0 diff
(100 %id)
DN993804 brain, whole brain .d 1 to 638 8 to 645 F95X tiling clone,   638/645
(98 %)
7 diff
(99.0 %id)
DR156471 human embryonic stem cells differentiated toan early endodermal cell type .e-u 1 to 825 1 to 825 exact tiling clone,   825/825
(100 %)
0 diff
(100 %id)
CB267213 adipose .f-u 1 to 521 1 to 522 exact tiling clone,   522/522
(100 %)
1 diff
(99.9 %id)
CB267994 adipose .f-u 3 to 562 1 to 560   tiling clone,   560/560
(100 %)
2 diff
(99.7 %id)
BX482711   .g-u 1 to 502 1 to 502 exact tiling clone,   502/503
(99 %)
1 diff
(99.9 %id)
AV651931 corresponding non cancerous liver tissue Gene PIK3CA, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u, .f-u, .g-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI