cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
DA000281 | .a | 195 to 702 | 2 to 509 | capped | 508/509 (99 %) | 1 diff (99.9 %id) | |||
DA004507 | .a | 184 to 751 | 2 to 569 | capped | 568/568 (100 %) | 0 diff (100 %id) | |||
AA783006 | .a | 1474 to 1832 | 363 to 7 | 357/363 (98 %) | 0 diff (100 %id) | ||||
AA317421 | retina | .a | 542 to 845 | 1 to 304 | 304/304 (100 %) | 0 diff (100 %id) | |||
AB086842 | .a | 195 to 1783 | 1 to 1589 | exact | 1589/1589 (100 %) | 0 diff (100 %id) | |||
DA018202 | adrenal gland | .a | 195 to 764 | 2 to 571 | capped | 570/570 (100 %) | 0 diff (100 %id) | ||
AK075507 | whole embryo, mainly head | .a | 176 to 1831 | 1 to 1656 | Y407N | 1656/1656 (100 %) | 4 diff (99.8 %id) | ||
AK095044 | hippocampus | .k-u | 982 to 4108 | 1 to 3127 | exact | tiling clone, available from FLJ, | 3127/3134 (99 %) | 8 diff (99.8 %id) | |
AK095356 | tongue, tumor tissue | .k-u | 292 to 4107 | 1 to 3816 | N81T | tiling clone, available from FLJ, | 3816/3816 (100 %) | 7 diff (99.9 %id) | |
AK301900 | testis | .b | 7 to 1475 | 1 to 1469 | L68I | tiling clone, | 1469/1469 (100 %) | 2 diff (99.9 %id) | |
AK308627 | cerebellum | .e | 1 to 982 | 1 to 982 | S200G T202A I203V S208G | tiling clone, | 982/982 (100 %) | 8 diff (99.2 %id) | |
AW369386 | breast_normal | .a | 1398 to 1773 | 16 to 391 | 376/391 (96 %) | 6 diff (98.5 %id) | |||
AW369392 | breast_normal | .a | 1407 to 1782 | 384 to 9 | 376/384 (97 %) | 0 diff (100 %id) | |||
AW369395 | breast_normal | .a | 1407 to 1773 | 1 to 367 | 367/367 (100 %) | 1 diff (99.8 %id) | |||
AW369424 | breast_normal | .a | 1407 to 1782 | 387 to 12 | 376/387 (97 %) | 0 diff (100 %id) | |||
AW369425 | breast_normal | .a | 1398 to 1783 | 10 to 394 | 385/397 (96 %) | 3 diff (99.3 %id) | |||
AW369429 | breast_normal | .a | 1407 to 1782 | 386 to 12 | 375/386 (97 %) | 0 diff (100 %id) | |||
AW376695 | colon | .m-u | 1 to 292 | 1 to 292 | V10D C11R | 292/292 (100 %) | 3 diff (99.0 %id) | ||
AW753001 | colon | .a | 723 to 1221 | 15 to 513 | 504/513 (98 %) | 12 diff (97.7 %id) | |||
AW753030 | colon | .a | 736 to 887 | 1 to 153 | 153/153 (100 %) | 1 diff (99.4 %id) | |||
AW848582 | colon | .m-u | 1 to 292 | 292 to 1 | exact | tiling clone, | 292/292 (100 %) | 1 diff (99.7 %id) | |
AW967073 | .a | 543 to 1173 | 1 to 634 | 634/634 (100 %) | 8 diff (98.8 %id) | ||||
AY339061 | .c | 1 to 1248 | 1 to 1248 | exact | tiling clone, | 1248/1248 (100 %) | 0 diff (100 %id) | ||
AY358816 | .a | 171 to 1832 | 1 to 1662 | exact | AAA | 1662/1662 (100 %) | 1 diff (100.0 %id) | ||
AY422169 | .a | 1 to 1832 | 1 to 1832 | exact | tiling clone, | 1832/1833 (99 %) | 1 diff (100.0 %id) | ||
BC030512 | Brain, anaplastic oligodendroglioma with1p/19q loss | .a | 201 to 1831 | 12 to 1642 | exact | available from MGC, AAA | 1631/1631 (100 %) | 0 diff (100 %id) | |
BE075843 | breast | .a | 903 to 1104 | 211 to 10 | Submitted on the opposite strand | 202/211 (95 %) | 0 diff (100 %id) | ||
BE834052 | ovary | .a | 1026 to 1432 | 8 to 421 | 412/421 (97 %) | 18 diff (95.8 %id) | |||
BF326436 | amnion_normal | .a | 920 to 1105 | 187 to 2 | 186/187 (99 %) | 0 diff (100 %id) | |||
BF335118 | colon | .a | 880 to 1278 | 419 to 22 | 398/422 (94 %) | 1 diff (99.8 %id) | |||
BF376737 | testis_normal | .a | 863 to 1281 | 423 to 5 | 419/423 (99 %) | 14 diff (96.7 %id) | |||
BF872722 | lung_tumor | .k-u | 2945 to 3271 | 20 to 346 | 327/346 (94 %) | 6 diff (98.3 %id) | |||
BF924668 | nervous_tumor | .a | 785 to 1047 | 1 to 263 | 263/263 (100 %) | 0 diff (100 %id) | |||
BF958418 | nervous_normal | .a | 879 to 1263 | 1 to 385 | 385/409 (94 %) | 6 diff (98.6 %id) | |||
BG186353 | .a | 823 to 1629 | 1 to 801 | 801/906 (88 %) | 21 diff (97.7 %id) | ||||
BG954898 | colon | .a | 1506 to 1882 | 11 to 386 | tiling clone, | 386/386 (100 %) | 4 diff (99.0 %id) | ||
BG989081 | head_neck | .a | 1198 to 1466 | 272 to 4 | 269/272 (98 %) | 8 diff (97.1 %id) | |||
BG991130 | head_neck | .a | 857 to 1202 | 356 to 10 | 347/402 (86 %) | 10 diff (97.6 %id) | |||
BG994238 | head_neck | .k-u | 3547 to 3921 | 1 to 386 | 386/386 (100 %) | 42 diff (89.2 %id) | |||
BM314325 | Pancreas, Purified pancreatic islet | .k-u | 9 to 577 | 1 to 569 | Submitted on the opposite strand | 569/569 (100 %) | 0 diff (100 %id) | ||
BM314633 | Pancreas, Purified pancreatic islet | .k-u | 623 to 1220 | 617 to 20 | tiling clone, | Submitted on the opposite strand | 598/617 (96 %) | 0 diff (100 %id) | |
BQ358475 | head_neck | .a | 1045 to 1378 | 337 to 3 | 335/340 (98 %) | 11 diff (96.8 %id) | |||
DA085725 | cerebellum | .a | 195 to 761 | 2 to 568 | capped | 567/567 (100 %) | 0 diff (100 %id) | ||
DA107398 | cerebellum | .e | 2 to 548 | 2 to 548 | capped | 547/547 (100 %) | 0 diff (100 %id) | ||
DC310386 | cerebellum | .a | 171 to 712 | 1 to 545 | 545/545 (100 %) | 4 diff (99.3 %id) | |||
DA135863 | alzheimer cortex | .a | 195 to 738 | 2 to 545 | capped | 544/544 (100 %) | 0 diff (100 %id) | ||
DA137059 | alzheimer cortex | .a | 195 to 717 | 2 to 524 | capped | 523/523 (100 %) | 0 diff (100 %id) | ||
DA157540 | amygdala | .k-u | 2074 to 2644 | 2 to 572 | capped | 571/571 (100 %) | 1 diff (99.9 %id) | ||
DA298125 | hippocampus | .k-u | 1375 to 1921 | 2 to 548 | capped | 547/547 (100 %) | 4 diff (99.3 %id) | ||
DA303946 | hippocampus | .k-u | 983 to 1542 | 2 to 561 | capped | 560/560 (100 %) | 6 diff (99.0 %id) | ||
DB308152 | hippocampus | .k-u | 3576 to 4108 | 541 to 8 | 534/542 (98 %) | 0 diff (100 %id) | |||
DA306068 | hippocampus | .j-u | 1 to 591 | 2 to 593 | N57* | tiling clone, capped | 592/592 (100 %) | 2 diff (99.7 %id) | |
DA368434 | subthalamic nucleus | .a | 193 to 753 | 2 to 562 | capped | 561/561 (100 %) | 0 diff (100 %id) | ||
DC340189 | thalamus | .a | 54 to 636 | 1 to 584 | 584/584 (100 %) | 1 diff (99.9 %id) | |||
BX281705 | eye, retinoblastoma | .a | 861 to 1323 | 1 to 463 | 463/463 (100 %) | 0 diff (100 %id) | |||
BP209245 | cerebellum | .a | 194 to 776 | 1 to 583 | 583/583 (100 %) | 0 diff (100 %id) | |||
BP213228 | cerebrum | .a | 194 to 770 | 1 to 577 | 577/577 (100 %) | 0 diff (100 %id) | |||
CN430799 | embryonic stem cells, cell lines H1, H7, andH9 | .a | 223 to 731 | 1 to 509 | 509/509 (100 %) | 1 diff (99.9 %id) | |||
CN430801 | embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells | .a | 907 to 1201 | 13 to 307 | 295/307 (96 %) | 8 diff (97.4 %id) | |||
CN430802 | embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 | .a | 225 to 525 | 1 to 301 | 301/301 (100 %) | 4 diff (98.7 %id) | |||
CN430803 | embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells | .a | 210 to 704 | 1 to 495 | 495/495 (100 %) | 2 diff (99.6 %id) | |||
DA426119 | colon | .a | 195 to 758 | 2 to 566 | capped | 565/565 (100 %) | 3 diff (99.5 %id) | ||
CR591905 | Neuroblastoma Cot 10-normalized | .a | 856 to 1811 | 1 to 956 | 956/956 (100 %) | 0 diff (100 %id) | |||
CR610914 | Placenta Cot 25-normalized | .a | 233 to 1769 | 1 to 1537 | 1537/1537 (100 %) | 0 diff (100 %id) | |||
CR624769 | Neuroblastoma Cot 10-normalized | .a | 1464 to 1827 | 1 to 364 | 364/364 (100 %) | 0 diff (100 %id) | |||
BX331338 | Neuroblastoma Cot 10-normalized | .a | 1464 to 1827 | 1 to 364 | 364/364 (100 %) | 0 diff (100 %id) | |||
AL520531 | brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized | .a | 925 to 1793 | 886 to 19 | 868/886 (97 %) | 3 diff (99.7 %id) | |||
AL520532 | brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized | .a | 856 to 1429 | 1 to 574 | 574/610 (94 %) | 1 diff (99.9 %id) | |||
BX386893 | Neuroblastoma Cot 10-normalized | .a | 1056 to 1799 | 756 to 13 | 744/756 (98 %) | 2 diff (99.8 %id) | |||
BX386894 | Neuroblastoma Cot 10-normalized | .a | 856 to 1546 | 1 to 691 | 691/691 (100 %) | 0 diff (100 %id) | |||
BX333161 | Neuroblastoma Cot 25-normalized | .a | 1252 to 1792 | 543 to 1 | 543/554 (98 %) | 7 diff (98.8 %id) | |||
BX333162 | Neuroblastoma Cot 25-normalized | .a | 177 to 791 | 1 to 616 | 616/616 (100 %) | 16 diff (97.5 %id) | |||
BX354924 | Neuroblastoma Cot 25-normalized | .d | 1 to 1098 | 1 to 1084 | V2D D246G I248H A250R V251S ... | tiling clone, | 1084/1092 (99 %) | 24 diff (97.9 %id) | |
BX459211 | placenta | .a | 246 to 1259 | 1 to 1015 | 1013/1015 (99 %) | 9 diff (99.2 %id) | |||
BX335957 | Placenta Cot 25-normalized | .a | 1241 to 1800 | 562 to 1 | 562/562 (100 %) | 11 diff (98.1 %id) | |||
BX335958 | Placenta Cot 25-normalized | .a | 205 to 395 | 37 to 227 | 191/244 (78 %) | 9 diff (96.4 %id) | |||
BX351572 | Placenta Cot 25-normalized | .a | 1127 to 1824 | 695 to 1 | 695/873 (79 %) | 13 diff (98.6 %id) | |||
BX397031 | Placenta Cot 25-normalized | .a | 1120 to 1738 | 642 to 4 | 639/903 (70 %) | 16 diff (98.3 %id) | |||
BX339880 | Placenta Cot 25-normalized | .a | 1002 to 1769 | 772 to 1 | fully sequenced, | 772/772 (100 %) | 10 diff (98.8 %id) | ||
BX339881 | Placenta Cot 25-normalized | .a | 233 to 1032 | 1 to 803 | fully sequenced, | 801/801 (100 %) | 6 diff (99.3 %id) | ||
DA443852 | tongue, tumor tissue | .k-u | 293 to 862 | 2 to 572 | capped | 571/571 (100 %) | 1 diff (99.9 %id) | ||
DB313856 | tongue, tumor tissue | .k-u | 3576 to 4107 | 532 to 1 | 532/532 (100 %) | 1 diff (99.9 %id) | |||
BX478435 | .n-u | 1 to 667 | 1 to 665 | F56L E57R M58W S60L H61T ... | tiling clone, | 665/665 (100 %) | 3 diff (99.6 %id) | ||
BX485575 | .l | 1 to 625 | 1 to 621 | tiling clone, | 621/634 (97 %) | 9 diff (98.6 %id) | |||
BP227036 | .a | 181 to 763 | 1 to 583 | 583/583 (100 %) | 1 diff (99.9 %id) | ||||
DW410560 | Liver | .l | 2 to 317 | 18 to 333 | 316/333 (94 %) | 6 diff (98.2 %id) | |||
DW420792 | Liver | .k-u | 3619 to 3902 | 16 to 299 | 284/299 (94 %) | 6 diff (98.0 %id) | |||
DW428902 | Liver | .l | 2 to 258 | 18 to 274 | 257/274 (93 %) | 6 diff (97.9 %id) | |||
EH319574 | .a | 415 to 488 | 1 to 74 | 74/74 (100 %) | 0 diff (100 %id) | ||||
EH354775. matches multiple genes | .a | 418 to 488 | 1 to 71 | tiling clone, | also hits gene cheysto | 71/71 (100 %) | 4 diff (94.4 %id) | ||
ES310575 | scalp interfollicular dermis, skin | .a | 1084 to 1394 | 1 to 312 | 312/690 (45 %) | 4 diff (99.5 %id) | |||
DC354739 | lung | .a | 171 to 679 | 1 to 509 | 509/509 (100 %) | 0 diff (100 %id) | |||
FN169206 | breast carcinoma | .a | 1605 to 1668 | 1 to 62 | 62/62 (100 %) | 3 diff (95.2 %id) | |||
DB531178 | hippocampus | .a | 1609 to 1832 | 1 to 226 | Submitted on the opposite strand | 226/227 (99 %) | 10 diff (95.6 %id) | ||
DA569389 | whole embryo, mainly head | .a | 177 to 1015 | 2 to 838 | capped | 837/845 (99 %) | 9 diff (99.0 %id) | ||
DA569743 | whole embryo, mainly head | .a | 193 to 1054 | 2 to 864 | capped | 863/870 (99 %) | 8 diff (99.1 %id) | ||
DB356435 | whole embryo, mainly head | .a | 1327 to 1831 | 505 to 1 | 505/538 (93 %) | 3 diff (99.5 %id) | |||
DA569760 | whole embryo, mainly head | .a | 193 to 1054 | 2 to 864 | capped | 863/863 (100 %) | 8 diff (99.1 %id) | ||
DB356453 | whole embryo, mainly head | .a | 1247 to 1831 | 585 to 1 | 585/590 (99 %) | 10 diff (98.4 %id) | |||
DA570411 | whole embryo, mainly head | .a | 184 to 1015 | 2 to 832 | capped | 831/831 (100 %) | 6 diff (99.3 %id) | ||
DB357179 | whole embryo, mainly head | .a | 1254 to 1831 | 580 to 1 | 580/580 (100 %) | 7 diff (98.8 %id) | |||
BP251997 | Kidney | .a | 198 to 775 | 1 to 578 | 578/578 (100 %) | 7 diff (98.8 %id) | |||
BP253160 | Kidney | .a | 198 to 785 | 1 to 588 | 588/588 (100 %) | 0 diff (100 %id) | |||
AA046236 | uterus | .a | 1510 to 1831 | 330 to 1 | fully sequenced, | 330/330 (100 %) | 7 diff (97.9 %id) | ||
AA046333 | uterus | .a | 1420 to 1540 | 1 to 123 | fully sequenced, | 123/123 (100 %) | 1 diff (99.2 %id) | ||
AA157236 | .a | 993 to 1374 | 1 to 383 | 383/383 (100 %) | 4 diff (99.0 %id) | ||||
AA157336 | .a | 1428 to 1811 | 379 to 1 | 379/381 (99 %) | 4 diff (99.0 %id) | ||||
AA287263 | germinal center B cell | .a | 735 to 1078 | 1 to 343 | 343/343 (100 %) | 1 diff (99.8 %id) | |||
AA287264 | germinal center B cell | .a | 1359 to 1827 | 468 to 3 | 466/469 (99 %) | 0 diff (100 %id) | |||
AA620831 | .a | 1428 to 1832 | 407 to 6 | 402/407 (98 %) | 0 diff (100 %id) | ||||
AA603739 | normal prostate, Prostate | .a | 1483 to 1831 | 347 to 1 | 347/347 (100 %) | 2 diff (99.5 %id) | |||
AA652645 | normal prostate, Prostate | .a | 1633 to 1806 | 174 to 1 | 174/174 (100 %) | 2 diff (98.9 %id) | |||
AA687605 | normal prostate, Prostate | .a | 1605 to 1833 | 238 to 10 | 229/238 (96 %) | 0 diff (100 %id) | |||
AA736961 | synovial sarcoma | .a | 1470 to 1831 | 392 to 32 | AAA | 361/361 (100 %) | 3 diff (99.2 %id) | ||
AA873360 | 2 pooled tumors (clear cell type), Kidney | .a | 1565 to 1827 | 270 to 8 | 263/270 (97 %) | 0 diff (100 %id) | |||
AA947462 | pooled | .a | 1744 to 1832 | 93 to 5 | 89/93 (95 %) | 0 diff (100 %id) | |||
AA987869 | Kidney, kidney tumor | .a | 1525 to 1832 | 311 to 6 | 306/311 (98 %) | 0 diff (100 %id) | |||
AI033368 | liver and spleen | .a | 1440 to 1831 | 390 to 1 | 390/390 (100 %) | 4 diff (99.0 %id) | |||
AI217304 | pooled | .a | 1489 to 1832 | 347 to 4 | 344/347 (99 %) | 0 diff (100 %id) | |||
AI350852 | pooled germ cell tumors | .a | 1516 to 1832 | 318 to 2 | 317/318 (99 %) | 0 diff (100 %id) | |||
AI493473 | anaplastic oligodendroglioma, brain | .a | 1490 to 1832 | 347 to 5 | 343/347 (98 %) | 0 diff (100 %id) | |||
AI372940 | uterus | .a | 1469 to 1831 | 363 to 1 | 363/363 (100 %) | 1 diff (99.8 %id) | |||
AI401687 | Prostate | .a | 1423 to 1832 | 414 to 6 | 409/414 (98 %) | 0 diff (100 %id) | |||
AI914866 | ovary, tumor, 5 pooled (see description) | .a | 1589 to 1831 | 244 to 1 | 244/244 (100 %) | 2 diff (99.2 %id) | |||
AI708514 | colon | .a | 1425 to 1831 | 407 to 1 | 407/407 (100 %) | 1 diff (99.8 %id) | |||
AI924230 | moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus | .a | 1164 to 1832 | 669 to 1 | 669/669 (100 %) | 2 diff (99.8 %id) | |||
AI885954 | uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors | .a | 1531 to 1825 | 321 to 27 | AAA | 295/295 (100 %) | 1 diff (99.7 %id) | ||
AI925992 | poorly differentiated adenocarcinoma withsignet ring cell features, stomach | .a | 1545 to 1832 | 294 to 3 | 292/294 (99 %) | 0 diff (100 %id) | |||
AW009044 | colon | .a | 1461 to 1827 | 368 to 2 | 367/369 (99 %) | 0 diff (100 %id) | |||
AW197825 | pooled | .a | 1582 to 1825 | 270 to 27 | AAA | 244/251 (97 %) | 14 diff (94.5 %id) | ||
BE276601 | melanotic melanoma, skin | .a | 231 to 824 | 1 to 593 | 593/594 (99 %) | 4 diff (99.4 %id) | |||
CF134727 | CNCAP(3)T-225 cell line, Prostate | .a | 561 to 1015 | 8 to 462 | 455/462 (98 %) | 11 diff (97.7 %id) | |||
BE254164 | eye, retinoblastoma | .f | 225 to 864 | 1 to 639 | tiling clone, | 639/643 (99 %) | 3 diff (99.6 %id) | ||
BF108741 | pooled | .a | 1164 to 1832 | 677 to 9 | 669/710 (94 %) | 13 diff (98.2 %id) | |||
BE731099 | choriocarcinoma, placenta | .a | 231 to 979 | 1 to 743 | 743/867 (85 %) | 10 diff (98.9 %id) | |||
BF310137 | muscle, rhabdomyosarcoma | .a | 1085 to 1707 | 1 to 618 | 618/623 (99 %) | 5 diff (99.2 %id) | |||
BF309515 | muscle, rhabdomyosarcoma | .a | 236 to 969 | 1 to 727 | 727/759 (95 %) | 17 diff (97.8 %id) | |||
BF689705 | melanotic melanoma, high MDR (cell line), skin | .a | 207 to 931 | 1 to 722 | 722/959 (75 %) | 17 diff (98.3 %id) | |||
BF690254 | melanotic melanoma, high MDR (cell line), skin | .a | 1045 to 1814 | 772 to 2 | 771/775 (99 %) | 10 diff (98.8 %id) | |||
BG111324 | Bone, osteosarcoma, cell line | .a | 455 to 1072 | 14 to 637 | 629/870 (72 %) | 27 diff (96.9 %id) | |||
BG122750 | adenocarcinoma, cell line, Liver | .a | 455 to 1053 | 14 to 612 | 601/612 (98 %) | 10 diff (98.4 %id) | |||
BG259185 | embryonal carcinoma, cell line, testis | .i | 1 to 749 | 1 to 733 | W11G E12S Y13M A14P M15* | tiling clone, | 733/733 (100 %) | 36 diff (95.1 %id) | |
BG470073 | adenocarcinoma cell line, colon | .a | 218 to 874 | 1 to 659 | 659/659 (100 %) | 4 diff (99.4 %id) | |||
BG716737 | brain, hypothalamus | .a | 189 to 898 | 1 to 711 | 711/712 (99 %) | 8 diff (98.9 %id) | |||
BG762932 | melanotic melanoma, high MDR (cell line), skin | .a | 207 to 933 | 1 to 740 | 650/741 (87 %) | 31 diff (95.9 %id) | |||
BG822593 | adenocarcinoma cell line, colon | .a | 1062 to 1639 | 1 to 596 | 596/597 (99 %) | 36 diff (94.0 %id) | |||
BG914290 | anaplastic oligodendroglioma with 1p/19qloss, brain | .a | 201 to 964 | 24 to 787 | 764/852 (89 %) | 15 diff (98.3 %id) | |||
BI114350 | muscle, rhabdomyosarcoma | .a | 211 to 827 | 1 to 629 | 629/906 (69 %) | 56 diff (93.9 %id) | |||
BI770264 | pooled lung and spleen | .f | 11 to 779 | 1 to 788 | 788/940 (83 %) | 29 diff (97.0 %id) | |||
BM910707 | astrocytoma grade IV, cell line, brain | .a | 450 to 1127 | 1 to 681 | 681/1097 (62 %) | 13 diff (98.9 %id) | |||
BM799815 | eye, retinoblastoma | .f | 35 to 915 | 12 to 890 | tiling clone, | 879/1083 (81 %) | 10 diff (99.1 %id) | ||
BM456123 | lymph, lymphoma, cell line | .a | 228 to 535 | 27 to 334 | 308/334 (92 %) | 6 diff (98.3 %id) | |||
BM470784 | eye, retinoblastoma | .a | 862 to 1661 | 1 to 811 | 811/908 (89 %) | 24 diff (97.4 %id) | |||
CK821351 | Pancreas, Purified pancreatic islet | .k-u | 621 to 1193 | 572 to 1 | 572/572 (100 %) | 3 diff (99.5 %id) | |||
CK821352 | Pancreas, Purified pancreatic islet | .k-u | 1 to 596 | 1 to 596 | tiling clone, | 596/596 (100 %) | 4 diff (99.4 %id) | ||
BM023338 | Islets of Langerhans, Pancreas | .a | 1316 to 1832 | 1 to 517 | 517/517 (100 %) | 1 diff (99.9 %id) | |||
CK904376 | Islets of Langerhans, Pancreas | .a | 1300 to 1831 | 1 to 532 | AAA | 532/532 (100 %) | 0 diff (100 %id) | ||
BM559815 | brain, medulla | .h | 1 to 897 | 14 to 915 | exact | tiling clone, | 909/1088 (83 %) | 27 diff (97.6 %id) | |
BU156600 | melanotic melanoma, skin | .a | 1161 to 1831 | 10 to 680 | AAA | 671/680 (98 %) | 6 diff (99.2 %id) | ||
BU553396 | ovary, teratocarcinoma, cell line | .a | 211 to 730 | 76 to 600 | 525/1202 (43 %) | 16 diff (98.7 %id) | |||
BU845119 | ovary, teratocarcinoma, cell line | .a | 216 to 1109 | 1 to 899 | 899/901 (99 %) | 9 diff (99.1 %id) | |||
CA487519 | .a | 466 to 1477 | 1 to 1010 | 1010/1014 (99 %) | 25 diff (97.6 %id) | ||||
CX870619 | embryonic stem | .a | 468 to 1233 | 1 to 766 | 766/766 (100 %) | 0 diff (100 %id) | |||
CX754318 | Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass | .a | 489 to 1248 | 1 to 750 | Submitted on the opposite strand | 750/753 (99 %) | 14 diff (98.2 %id) | ||
DR158486 | human embryonic stem cells differentiated toan early endodermal cell type | .a | 391 to 1225 | 1 to 835 | 835/835 (100 %) | 0 diff (100 %id) | |||
DR761647 | embryonic stem | .a | 235 to 1042 | 1 to 808 | 808/808 (100 %) | 0 diff (100 %id) | |||
CD515365 | White Matter | .k-u | 3607 to 4107 | 1 to 501 | AAA | 501/501 (100 %) | 0 diff (100 %id) | ||
CD657173 | Embryonic Stem cells | .m-u | 162 to 968 | 48 to 852 | tiling clone, | 805/900 (89 %) | 22 diff (97.6 %id) | ||
CF994685 | Human Placenta, placenta | .a | 190 to 849 | 24 to 683 | 660/684 (96 %) | 7 diff (99.0 %id) | |||
CF131627 | Chondrosarcoma Lung Metastasis cell lines, lung | .a | 1525 to 1831 | 1 to 307 | AAA | 307/307 (100 %) | 0 diff (100 %id) | ||
CF145757 | CNCAP(3)T-225 cell line, Prostate | .a | 561 to 1251 | 8 to 697 | 690/703 (98 %) | 8 diff (98.9 %id) | |||
DA612334 | .a | 195 to 749 | 2 to 556 | capped | 555/556 (99 %) | 1 diff (99.9 %id) | |||
TI_57180109 | .f | 1 to 779 | 22 to 818 | L2G V3I L4W V5C L6W ... | tiling clone, | 797/970 (82 %) | 31 diff (96.9 %id) | ||
BP272571 | .a | 167 to 779 | 1 to 613 | 613/613 (100 %) | 3 diff (99.6 %id) | ||||
BP283020 | bone marrow | .a | 194 to 774 | 1 to 581 | 581/581 (100 %) | 0 diff (100 %id) | |||
CB146791 | Liver | .a | 623 to 728 | 10 to 115 | 106/118 (89 %) | 7 diff (94.1 %id) | |||
BP296666 | .a | 194 to 776 | 1 to 583 | 583/583 (100 %) | 1 diff (99.9 %id) | ||||
BP298084 | .a | 183 to 762 | 1 to 580 | 580/580 (100 %) | 0 diff (100 %id) | ||||
DA668554 | esophagus | .a | 195 to 762 | 2 to 570 | capped | 569/569 (100 %) | 1 diff (99.9 %id) | ||
NM_080476.4 | .a | 1 to 1833 | 1 to 1833 | exact | RefSeq, | 1833/1833 (100 %) | 1 diff (100.0 %id) | ||
DA685676 | .a | 195 to 733 | 2 to 540 | capped | 539/539 (100 %) | 0 diff (100 %id) | |||
DA693975 | .a | 195 to 769 | 2 to 576 | capped | 575/575 (100 %) | 0 diff (100 %id) | |||
DA728005 | .a | 195 to 947 | 2 to 757 | capped | 756/756 (100 %) | 3 diff (99.7 %id) | |||
DA740378 | .a | 184 to 730 | 2 to 549 | capped | 548/554 (98 %) | 2 diff (99.7 %id) | |||
DA829088 | placenta | .b | 1 to 666 | 2 to 670 | tiling clone, capped | 666/669 (99 %) | 8 diff (98.9 %id) | ||
DB373779 | placenta | .b | 1387 to 1767 | 381 to 1 | tiling clone, | 381/383 (99 %) | 4 diff (99.0 %id) | ||
BP331352 | rectum | .a | 183 to 755 | 1 to 575 | 575/579 (99 %) | 8 diff (98.7 %id) | |||
BM742593 | Ascites, stomach | .a | 935 to 1504 | 1 to 570 | 570/570 (100 %) | 1 diff (99.9 %id) | |||
BM766132 | stomach | .g | 1 to 509 | 1 to 508 | F72L K73S S74P Y75T P76R ... | tiling clone, | 508/508 (100 %) | 2 diff (99.7 %id) | |
BM841387 | lymph node, stomach | .a | 1304 to 1467 | 1 to 163 | 163/163 (100 %) | 1 diff (99.4 %id) | |||
BM846196 | myeloma | .a | 635 to 1074 | 1 to 440 | 440/440 (100 %) | 2 diff (99.6 %id) | |||
BM854486 | Ascites, stomach | .a | 1161 to 1673 | 1 to 513 | 513/513 (100 %) | 1 diff (99.9 %id) | |||
DA903524 | .a | 177 to 516 | 2 to 341 | capped | 340/340 (100 %) | 0 diff (100 %id) | |||
DC388171 | small intestine | .a | 161 to 742 | 1 to 582 | 582/582 (100 %) | 0 diff (100 %id) | |||
DN989926 | brain, whole brain | .a | 188 to 763 | 1 to 576 | 576/576 (100 %) | 5 diff (99.2 %id) | |||
DC393702 | colon, tumor tissue | .a | 171 to 721 | 1 to 551 | 551/551 (100 %) | 1 diff (99.9 %id) | |||
DB011393 | colon, tumor tissue | .a | 199 to 766 | 2 to 569 | capped | 568/568 (100 %) | 0 diff (100 %id) | ||
DC395988 | testis | .a | 201 to 757 | 1 to 557 | 557/557 (100 %) | 1 diff (99.9 %id) | |||
DC398774 | testis | .a | 96 to 657 | 1 to 563 | 563/563 (100 %) | 1 diff (99.9 %id) | |||
TI_149299178 | .a | 1293 to 1832 | 648 to 108 | 541/876 (61 %) | 8 diff (99.1 %id) | ||||
TI_154162746 | .a | 561 to 1132 | 80 to 653 | 574/1219 (47 %) | 23 diff (98.2 %id) | ||||
TI_154178026 | .a | 561 to 1259 | 71 to 769 | 699/928 (75 %) | 5 diff (99.5 %id) | ||||
TI_159677258 | .a | 1464 to 1831 | 50 to 417 | AAA | 368/417 (88 %) | 6 diff (98.6 %id) | |||
DB187518 | liver, tumor tissue | .a | 195 to 769 | 2 to 576 | capped | 575/575 (100 %) | 1 diff (99.9 %id) | ||
DB193636 | ovary, tumor tissue | .a | 195 to 728 | 2 to 535 | capped | 534/534 (100 %) | 0 diff (100 %id) | ||
BP370668 | testis | .a | 183 to 753 | 1 to 569 | 569/569 (100 %) | 2 diff (99.7 %id) | |||
BM975633 | lung, Primary Lung Cystic Fibrosis EpithelialCells | .a | 1472 to 1831 | 378 to 19 | AAA | 360/360 (100 %) | 7 diff (98.1 %id) | ||
DB247698 | uterus | .a | 195 to 708 | 2 to 515 | capped | 514/514 (100 %) | 1 diff (99.9 %id) | ||
DB256012 | uterus | .a | 195 to 755 | 2 to 562 | capped | 561/561 (100 %) | 0 diff (100 %id) | ||
CN430800 | embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 | .a | 468 to 1233 | 1 to 766 | This clone was ignored | 766/766 (100 %) | 0 diff (100 %id) | ||
AA223699 | brain, neuroepithelial cells | .a | 489 to 1248 | 1 to 750 | fully sequenced, | This clone was ignored | 750/753 (99 %) | 14 diff (98.2 %id) | |
AA223775 | brain, neuroepithelial cells | .a | 489 to 1248 | 1 to 750 | fully sequenced, | This clone was ignored | 750/753 (99 %) | 14 diff (98.2 %id) | |
AW205165 | .a | 391 to 1225 | 1 to 835 | This clone was ignored | 835/835 (100 %) | 0 diff (100 %id) | |||
AW769396 | 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney | .a | 235 to 1042 | 1 to 808 | This clone was ignored | 808/808 (100 %) | 0 diff (100 %id) | ||
BM023087 | Islets of Langerhans, Pancreas | .k-u | 3607 to 4107 | 1 to 501 | This clone was ignored | 501/501 (100 %) | 0 diff (100 %id) | ||
CK904375 | Islets of Langerhans, Pancreas | .m-u | 162 to 968 | 48 to 852 | tiling clone, | This clone was ignored | 805/900 (89 %) | 22 diff (97.6 %id) | |
BQ722136 | sympathetic trunk | .a | 190 to 849 | 24 to 683 | This clone was ignored | 660/684 (96 %) | 7 diff (99.0 %id) | ||
BQ718188 | sympathetic trunk | .a | 190 to 849 | 24 to 683 | This clone was ignored | 660/684 (96 %) | 7 diff (99.0 %id) | ||
CD109728 | Human Placenta, placenta | .a | 1525 to 1831 | 1 to 307 | This clone was ignored | 307/307 (100 %) | 0 diff (100 %id) | ||
BM707972 | eye, RPE and Choroid | .a | 1525 to 1831 | 1 to 307 | fully sequenced, | This clone was ignored | 307/307 (100 %) | 0 diff (100 %id) | |
BU731832 | eye, RPE and Choroid | .a | 561 to 1251 | 8 to 697 | fully sequenced, | This clone was ignored | 690/703 (98 %) | 8 diff (98.9 %id) | |
BM663797 | eye, human retina | .a | 561 to 1251 | 8 to 697 | fully sequenced, | This clone was ignored | 690/703 (98 %) | 8 diff (98.9 %id) | |
BM692575 | eye, human retina | .a | 195 to 749 | 2 to 556 | fully sequenced, | This clone was ignored | 555/556 (99 %) | 1 diff (99.9 %id) | |
BM665246 | eye, human retina | .f | 1 to 779 | 22 to 818 | tiling clone, | This clone was ignored | 797/970 (82 %) | 31 diff (96.9 %id) | |
BU630305 | cell lines, Chondrosarcoma | .a | 167 to 779 | 1 to 613 | This clone was ignored | 613/613 (100 %) | 3 diff (99.6 %id) | ||
BP283020 | bone marrow | .a | 194 to 774 | 1 to 581 | 581/581 (100 %) | 0 diff (100 %id) | |||
CB146791 | Liver | .a | 623 to 728 | 10 to 115 | 106/118 (89 %) | 7 diff (94.1 %id) | |||
BP296666 | .a | 194 to 776 | 1 to 583 | 583/583 (100 %) | 1 diff (99.9 %id) | ||||
BP298084 | .a | 183 to 762 | 1 to 580 | 580/580 (100 %) | 0 diff (100 %id) | ||||
DA668554 | esophagus | .a | 195 to 762 | 2 to 570 | capped | 569/569 (100 %) | 1 diff (99.9 %id) | ||
NM_080476.4 | .a | 1 to 1833 | 1 to 1833 | exact | RefSeq, | 1833/1833 (100 %) | 1 diff (100.0 %id) | ||
DA685676 | .a | 195 to 733 | 2 to 540 | capped | 539/539 (100 %) | 0 diff (100 %id) | |||
DA693975 | .a | 195 to 769 | 2 to 576 | capped | 575/575 (100 %) | 0 diff (100 %id) | |||
DA728005 | .a | 195 to 947 | 2 to 757 | capped | 756/756 (100 %) | 3 diff (99.7 %id) | |||
DA740378 | .a | 184 to 730 | 2 to 549 | capped | 548/554 (98 %) | 2 diff (99.7 %id) | |||
DA829088 | placenta | .b | 1 to 666 | 2 to 670 | tiling clone, capped | 666/669 (99 %) | 8 diff (98.9 %id) | ||
DB373779 | placenta | .b | 1387 to 1767 | 381 to 1 | tiling clone, | 381/383 (99 %) | 4 diff (99.0 %id) | ||
BP331352 | rectum | .a | 183 to 755 | 1 to 575 | 575/579 (99 %) | 8 diff (98.7 %id) | |||
BM742593 | Ascites, stomach | .a | 935 to 1504 | 1 to 570 | 570/570 (100 %) | 1 diff (99.9 %id) | |||
BM742593 | Ascites, stomach | .a | 935 to 1504 | 1 to 570 | 570/570 (100 %) | 1 diff (99.9 %id) | |||
BM766132 | stomach | .g | 1 to 509 | 1 to 508 | F72L K73S S74P Y75T P76R ... | tiling clone, | 508/508 (100 %) | 2 diff (99.7 %id) | |
BM841387 | lymph node, stomach | .a | 1304 to 1467 | 1 to 163 | 163/163 (100 %) | 1 diff (99.4 %id) | |||
BM841387 | lymph node, stomach | .a | 1304 to 1467 | 1 to 163 | 163/163 (100 %) | 1 diff (99.4 %id) | |||
BM846196 | myeloma | .a | 635 to 1074 | 1 to 440 | 440/440 (100 %) | 2 diff (99.6 %id) | |||
BM854486 | Ascites, stomach | .a | 1161 to 1673 | 1 to 513 | 513/513 (100 %) | 1 diff (99.9 %id) | |||
BM854486 | Ascites, stomach | .a | 1161 to 1673 | 1 to 513 | 513/513 (100 %) | 1 diff (99.9 %id) | |||
DA903524 | .a | 177 to 516 | 2 to 341 | capped | 340/340 (100 %) | 0 diff (100 %id) | |||
DC388171 | small intestine | .a | 161 to 742 | 1 to 582 | 582/582 (100 %) | 0 diff (100 %id) | |||
DN989926 | brain, whole brain | .a | 188 to 763 | 1 to 576 | 576/576 (100 %) | 5 diff (99.2 %id) | |||
DN989926 | brain, whole brain | .a | 188 to 763 | 1 to 576 | 576/576 (100 %) | 5 diff (99.2 %id) | |||
DC393702 | colon, tumor tissue | .a | 171 to 721 | 1 to 551 | 551/551 (100 %) | 1 diff (99.9 %id) | |||
DB011393 | colon, tumor tissue | .a | 199 to 766 | 2 to 569 | capped | 568/568 (100 %) | 0 diff (100 %id) | ||
DC395988 | testis | .a | 201 to 757 | 1 to 557 | 557/557 (100 %) | 1 diff (99.9 %id) | |||
DC398774 | testis | .a | 96 to 657 | 1 to 563 | 563/563 (100 %) | 1 diff (99.9 %id) | |||
TI_149299178 | .a | 1293 to 1832 | 648 to 108 | 541/876 (61 %) | 8 diff (99.1 %id) | ||||
TI_154162746 | .a | 561 to 1132 | 80 to 653 | 574/1219 (47 %) | 23 diff (98.2 %id) | ||||
TI_154178026 | .a | 561 to 1259 | 71 to 769 | 699/928 (75 %) | 5 diff (99.5 %id) | ||||
TI_159677258 | .a | 1464 to 1831 | 50 to 417 | AAA | 368/417 (88 %) | 6 diff (98.6 %id) | |||
DB187518 | liver, tumor tissue | .a | 195 to 769 | 2 to 576 | capped | 575/575 (100 %) | 1 diff (99.9 %id) | ||
DB193636 | ovary, tumor tissue | .a | 195 to 728 | 2 to 535 | capped | 534/534 (100 %) | 0 diff (100 %id) | ||
BP370668 | testis | .a | 183 to 753 | 1 to 569 | 569/569 (100 %) | 2 diff (99.7 %id) | |||
BM975633 | lung, Primary Lung Cystic Fibrosis EpithelialCells | .a | 1472 to 1831 | 378 to 19 | AAA | 360/360 (100 %) | 7 diff (98.1 %id) | ||
BM975633 | lung, Primary Lung Cystic Fibrosis EpithelialCells | .a | 1472 to 1831 | 378 to 19 | AAA | 360/360 (100 %) | 7 diff (98.1 %id) | ||
DB247698 | uterus | .a | 195 to 708 | 2 to 515 | capped | 514/514 (100 %) | 1 diff (99.9 %id) | ||
DB256012 | uterus | .a | 195 to 755 | 2 to 562 | capped | 561/561 (100 %) | 0 diff (100 %id) |