cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
AJ457189 | .a | 1 to 2046 | 1 to 2070 | exact | tiling clone, | 2036/2070 (98 %) | 10 diff (99.6 %id) | ||
BC117187 | Colon, PCR rescued clones | .a | 334 to 1756 | 1 to 1423 | exact | tiling clone, | 1423/1423 (100 %) | 0 diff (100 %id) | |
TI_2194628828 | .c | 334 to 1348 | 47 to 1061 | A263G E264R P265A S266Q S267L ... | 1015/1255 (80 %) | 17 diff (98.7 %id) | |||
TI_2194629207 | .c | 716 to 1883 | 1235 to 71 | 1165/1239 (94 %) | 0 diff (100 %id) | ||||
TI_2194630465 | .c | 334 to 1316 | 50 to 1027 | N231T D232T F233S C234A M236W ... | 978/1171 (83 %) | 17 diff (98.6 %id) | |||
TI_2194630468 | .c | 810 to 1883 | 1155 to 76 | 1080/1247 (86 %) | 0 diff (100 %id) | ||||
TI_2194631582 | .c | 1388 to 1883 | 1 to 495 | 495/1307 (37 %) | 2 diff (99.9 %id) | ||||
TI_2194631583 | .c | 854 to 1883 | 17 to 1043 | 1027/1264 (81 %) | 4 diff (99.7 %id) | ||||
TI_1320133831 | .a | 334 to 1219 | 243 to 1120 | A245V S246A V247* | Submitted on the opposite strand | 878/1263 (69 %) | 19 diff (98.5 %id) | ||
BX090191 | liver and spleen | .a | 318 to 798 | 1 to 482 | 482/482 (100 %) | 2 diff (99.6 %id) | |||
R11614 | liver and spleen | .a | 319 to 643 | 1 to 336 | 336/344 (97 %) | 23 diff (93.4 %id) | |||
R19404 | liver and spleen | .a | 1035 to 1257 | 229 to 10 | 220/234 (94 %) | 0 diff (100 %id) | |||
AA907909 | pooled | .a | 310 to 591 | 277 to 2 | 276/277 (99 %) | 1 diff (99.7 %id) | |||
AA936591 | pooled | .c | 338 to 647 | 312 to 5 | 308/312 (98 %) | 0 diff (100 %id) | |||
AI016183 | .a | 136 to 625 | 480 to 2 | 479/480 (99 %) | 2 diff (99.6 %id) | ||||
AI040969 | .a | 157 to 625 | 469 to 1 | 469/469 (100 %) | 1 diff (99.8 %id) | ||||
AI056863 | liver and spleen | .c | 884 to 1384 | 518 to 18 | AAA | 501/501 (100 %) | 0 diff (100 %id) | ||
AI078017 | liver and spleen | .c | 993 to 1384 | 393 to 2 | 392/393 (99 %) | 0 diff (100 %id) | |||
AI219140 | placenta | .a | 239 to 607 | 368 to 1 | tiling clone, | 368/368 (100 %) | 2 diff (99.5 %id) | ||
AI208020 | .a | 229 to 625 | 397 to 1 | 397/397 (100 %) | 1 diff (99.8 %id) | ||||
AI572300 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .a | 344 to 625 | 284 to 1 | 284/284 (100 %) | 2 diff (99.3 %id) | |||
AI553958 | pooled | .c | 1686 to 2127 | 448 to 7 | tiling clone, | 442/450 (98 %) | 0 diff (100 %id) | ||
AI376647 | pooled | .c | 327 to 752 | 426 to 1 | 426/426 (100 %) | 0 diff (100 %id) | |||
AI809978 | pooled | .a | 229 to 592 | 364 to 1 | 364/364 (100 %) | 0 diff (100 %id) | |||
AW002858 | pooled germ cell tumors | .c | 515 to 683 | 169 to 1 | 169/169 (100 %) | 2 diff (98.9 %id) | |||
AI968404 | pooled germ cell tumors | .c | 282 to 719 | 438 to 1 | 438/438 (100 %) | 0 diff (100 %id) | |||
AI971889 | fibrotheoma, ovary | .c | 790 to 1288 | 1 to 499 | Submitted on the opposite strand | 499/499 (100 %) | 3 diff (99.4 %id) | ||
AW072455 | pooled | .c | 1760 to 2181 | 423 to 2 | tiling clone, | 422/423 (99 %) | 0 diff (100 %id) | ||
AW104523 | pooled | .d | 108 to 520 | 413 to 1 | 413/413 (100 %) | 0 diff (100 %id) | |||
AW236872 | pooled germ cell tumors | .c | 353 to 730 | 376 to 1 | 376/376 (100 %) | 1 diff (99.8 %id) | |||
AW269906 | pooled | .c | 790 to 1278 | 1 to 489 | Submitted on the opposite strand | 489/489 (100 %) | 0 diff (100 %id) | ||
AW592757 | pooled | .a | 391 to 589 | 199 to 1 | 199/199 (100 %) | 4 diff (98.0 %id) | |||
BF515819 | .c | 462 to 751 | 290 to 1 | 290/290 (100 %) | 0 diff (100 %id) | ||||
BF062319 | pooled germ cell tumors | .c | 548 to 740 | 193 to 1 | 193/193 (100 %) | 2 diff (99.0 %id) | |||
BF115441 | fibrotheoma, ovary | .c | 790 to 1216 | 1 to 427 | Submitted on the opposite strand | 427/427 (100 %) | 7 diff (98.4 %id) | ||
BI825489 | brain, medulla | .d | 5 to 512 | 1 to 508 | 508/508 (100 %) | 0 diff (100 %id) | |||
BC029931 | Brain, adult medulla | .c | 20 to 752 | 1 to 733 | tiling clone, available from MGC, | 733/733 (100 %) | 1 diff (99.9 %id) | ||
BI827569 | brain, medulla | .c | 20 to 744 | 1 to 726 | available from MGC, | 726/726 (100 %) | 5 diff (99.4 %id) | ||
BI763812 | pooled colon, kidney, stomach | .c | 1360 to 2175 | 1 to 808 | tiling clone, | 808/808 (100 %) | 18 diff (97.8 %id) | ||
BM554336 | brain, medulla | .b | 1 to 837 | 1 to 839 | E140G S141E Y146L R147P E148A ... | tiling clone, | 839/839 (100 %) | 5 diff (99.5 %id) | |
BC143884 | Colon, PCR rescued clones | .c | 334 to 1883 | 1 to 1550 | exact | tiling clone, | 1550/1550 (100 %) | 0 diff (100 %id) | |
TI_57151786 | .c | 1363 to 2175 | 117 to 921 | 805/921 (87 %) | 6 diff (99.4 %id) | ||||
TI_57170379 | .d | 1 to 520 | 79 to 598 | exact | tiling clone, | 520/923 (56 %) | 7 diff (99.3 %id) | ||
TI_57171464 | .c | 13 to 751 | 64 to 803 | tiling clone, | 740/872 (84 %) | 11 diff (98.8 %id) | |||
NM_178500.3 | .a | 1 to 2046 | 1 to 2046 | exact | RefSeq, | 2046/2046 (100 %) | 0 diff (100 %id) | ||
NM_001143804.1 | .c | 1 to 2173 | 1 to 2173 | exact | RefSeq, | 2173/2173 (100 %) | 0 diff (100 %id) | ||
DN999044 | bone marrow | .a | 310 to 977 | 8 to 675 | 668/675 (98 %) | 6 diff (99.2 %id) | |||
BQ576275 | Chondrosarcoma Grade II, Left Pelvis | .c | 1515 to 2175 | 679 to 19 | AAA | 661/661 (100 %) | 15 diff (97.8 %id) | ||
AW665274 | pooled | .d | 1 to 520 | 79 to 598 | tiling clone, | This clone was ignored | 520/923 (56 %) | 7 diff (99.3 %id) | |
TI_57171464 | .c | 13 to 751 | 64 to 803 | tiling clone, | 740/872 (84 %) | 11 diff (98.8 %id) | |||
NM_178500.3 | .a | 1 to 2046 | 1 to 2046 | exact | RefSeq, | 2046/2046 (100 %) | 0 diff (100 %id) | ||
NM_001143804.1 | .c | 1 to 2173 | 1 to 2173 | exact | RefSeq, | 2173/2173 (100 %) | 0 diff (100 %id) | ||
DN999044 | bone marrow | .a | 310 to 977 | 8 to 675 | 668/675 (98 %) | 6 diff (99.2 %id) | |||
BQ576275 | Chondrosarcoma Grade II, Left Pelvis | .c | 1515 to 2175 | 679 to 19 | AAA | 661/661 (100 %) | 15 diff (97.8 %id) | ||
BQ576275 | Chondrosarcoma Grade II, Left Pelvis | .c | 1515 to 2175 | 679 to 19 | AAA | 661/661 (100 %) | 15 diff (97.8 %id) |
? | Gene Summary | Gene on genome | mRNA:.a, .b, .c, .d | Alternative mRNAs features, proteins, introns, exons, sequences | Expression Tissue | Function, regulation, related genes C |