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Gene PFDN5andC12orf10TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
605 representative clones for gene PFDN5andC12orf10 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK024094 whole embryo, mainly head .a 1 to 1979 2 to 1983   tiling clone, available from FLJ,   1983/1983
(100 %)
5 diff
(99.8 %id)
AU118788 whole embryo, mainly head .a 1 to 477 2 to 478   capped   477/477
(100 %)
2 diff
(99.6 %id)
N74590 liver and spleen .a 469 to 904 444 to 1       444/463
(95 %)
7 diff
(98.5 %id)
BF969500 adrenal cortex carcinoma, cell line, adrenal gland .a 668 to 1413 14 to 758       745/772
(96 %)
19 diff
(97.6 %id)
BG026562 Bone, osteosarcoma, cell line .a 686 to 1320 1 to 633       633/961
(65 %)
9 diff
(99.1 %id)
AW749629 breast .a 916 to 1358 448 to 1   tiling clone,   448/465
(96 %)
25 diff
(94.7 %id)
AA312105 Kidney .a 1258 to 1532 1 to 278       278/279
(99 %)
3 diff
(99.0 %id)
AU145271 whole embryo, mainly head .a 1384 to 1979 583 to 1       583/583
(100 %)
22 diff
(96.3 %id)
CN308888 embryonic stem cells, DMSO-treated H9 cellline .a 1881 to 2500 1 to 620   tiling clone,   620/620
(100 %)
5 diff
(99.2 %id)
DB455805 testis .a 2219 to 2696 1 to 479       479/479
(100 %)
6 diff
(98.8 %id)
NM_021640.3   .a 2219 to 3433 1 to 1215 T349I RefSeq,   1215/1215
(100 %)
1 diff
(100.0 %id)
CB142457 Liver .a 2228 to 2779 1 to 552       552/552
(100 %)
3 diff
(99.5 %id)
BX423625 brain, fetal brain .a 2230 to 3215 1 to 979       979/979
(100 %)
39 diff
(96.1 %id)
CR626228 fetal brain .a 2231 to 3410 1 to 1180 exact tiling clone,   1180/1180
(100 %)
0 diff
(100 %id)
DB461787 testis .a 2231 to 2711 1 to 481       481/481
(100 %)
2 diff
(99.6 %id)
BF868861 lung_tumor .a 2234 to 2508 1 to 275       275/275
(100 %)
3 diff
(99.0 %id)
BU789940 insulinoma, Pancreas .a 2237 to 2836 1 to 600   fully sequenced,   600/600
(100 %)
6 diff
(99.0 %id)
CR997443 T-Lymphocytes .a 2239 to 2842 1 to 605       605/605
(100 %)
9 diff
(98.6 %id)
CD671938 eye, Iris .a 2242 to 2741 1 to 500       500/500
(100 %)
2 diff
(99.6 %id)
BI829164 brain, medulla .a 2242 to 3082 1 to 835       835/836
(99 %)
12 diff
(98.6 %id)
TI_45235970   .a 2242 to 2662 58 to 476   fully sequenced,   419/476
(88 %)
6 diff
(98.8 %id)
TI_57175896   .a 2242 to 3082 29 to 863       835/864
(96 %)
15 diff
(98.3 %id)
AA401585   .a 2244 to 2665 1 to 421       421/421
(100 %)
3 diff
(99.3 %id)
BF698346 brain, primitive neuroectoderm .a 2245 to 2891 1 to 643       641/862
(74 %)
20 diff
(97.7 %id)
BF978384 melanotic melanoma, high MDR, skin .a 2246 to 2913 1 to 680       680/885
(76 %)
33 diff
(96.3 %id)
BQ962589 epithelioid carcinoma cell line, Pancreas .a 2246 to 3124 1 to 891       891/921
(96 %)
16 diff
(98.3 %id)
BI517574 pooled colon, kidney, stomach .a 2248 to 2662 1 to 413   fully sequenced,   413/413
(100 %)
4 diff
(99.1 %id)
AF289485   .a 2251 to 3422 1 to 1172 Q4R T150P T349I H353P AAA   1172/1172
(100 %)
7 diff
(99.5 %id)
CN308868 embryonic stem cells, cell lines H1, H7, andH9 .a 2251 to 2847 1 to 598       598/598
(100 %)
5 diff
(99.2 %id)
BI520076 brain, medulla .a 2251 to 3126 1 to 877       877/877
(100 %)
12 diff
(98.7 %id)
TI_43963498   .a 2251 to 3126 37 to 913       877/913
(96 %)
15 diff
(98.4 %id)
TI_57175720   .a 2252 to 2939 61 to 747       687/747
(91 %)
7 diff
(99.1 %id)
BF691907 melanotic melanoma, high MDR, skin .a 2253 to 2919 1 to 674       674/754
(89 %)
18 diff
(97.7 %id)
CN484195 eye .a 2254 to 2864 12 to 622       611/622
(98 %)
6 diff
(99.1 %id)
BQ920546 epidermoid carcinoma, cell line, lung .a 2254 to 3037 1 to 790       790/972
(81 %)
14 diff
(98.6 %id)
BG180755 adenocarcinoma, cell line, Prostate .a 2255 to 3028 1 to 768       766/902
(84 %)
30 diff
(96.7 %id)
BC051871 Brain, adult medulla .a 2260 to 3422 1 to 1163 Q4R T349I H353R available from MGC, AAA   1163/1163
(100 %)
4 diff
(99.7 %id)
CD675392 eye, lens .a 2260 to 2984 1 to 725       725/725
(100 %)
2 diff
(99.8 %id)
BI831796 brain, medulla .a 2260 to 2939 1 to 678       678/678
(100 %)
4 diff
(99.5 %id)
BF034925 adenocarcinoma, ovary .a 2263 to 2992 1 to 723       723/951
(76 %)
20 diff
(97.9 %id)
BF130003 hypernephroma, Kidney .a 2264 to 2919 1 to 649       649/827
(78 %)
24 diff
(97.1 %id)
CR614390 Neuroblastoma Cot 25-normalized .a 2266 to 3388 1 to 1123       1123/1123
(100 %)
0 diff
(100 %id)
BX332821 Neuroblastoma Cot 25-normalized .a 2266 to 2790 1 to 525   fully sequenced,   525/525
(100 %)
2 diff
(99.7 %id)
CB152502 Liver .a 2266 to 2874 1 to 609       609/609
(100 %)
2 diff
(99.7 %id)
BE871509 adenocarcinoma, colon .a 2267 to 3009 1 to 742       742/850
(87 %)
20 diff
(97.7 %id)
BG764185 melanotic melanoma, high MDR (cell line), skin .a 2268 to 3095 1 to 832       799/846
(94 %)
21 diff
(97.6 %id)
CA394654 eye, RPE/choroid .a 2269 to 2698 1 to 430       430/430
(100 %)
6 diff
(98.7 %id)
EL734695 mixed .a 2271 to 2926 1 to 655       655/655
(100 %)
3 diff
(99.6 %id)
BE544410 cervical carcinoma cell line, cervix .a 2271 to 2888 1 to 620       620/620
(100 %)
7 diff
(98.9 %id)
BE388549 endometrium, adenocarcinoma cell line, uterus .a 2271 to 2847 1 to 577       577/578
(99 %)
3 diff
(99.5 %id)
BE387776 endometrium, adenocarcinoma cell line, uterus .a 2271 to 2927 1 to 662       662/662
(100 %)
12 diff
(98.2 %id)
BE391375 endometrium, adenocarcinoma cell line, uterus .a 2271 to 2891 1 to 621       621/626
(99 %)
19 diff
(97.0 %id)
TI_1948211932   .a 2271 to 2851 133 to 713   fully sequenced,   581/713
(81 %)
6 diff
(99.2 %id)
TI_1948212068   .a 2271 to 2943 133 to 804   fully sequenced,   672/804
(83 %)
9 diff
(98.9 %id)
TI_1948212214   .a 2271 to 2851 136 to 716   fully sequenced,   581/716
(81 %)
6 diff
(99.2 %id)
TI_1948212349   .a 2271 to 2851 128 to 708   fully sequenced,   581/708
(82 %)
6 diff
(99.2 %id)
CD695842 normal nasopharynx .a 2273 to 2888 12 to 627       616/627
(98 %)
6 diff
(99.1 %id)
CN308876 embryonic stem cells, DMSO-treated H9 cellline .a 2273 to 2793 1 to 521       521/521
(100 %)
2 diff
(99.7 %id)
BX361481 Placenta Cot 25-normalized .a 2274 to 3236 1 to 957       957/1019
(93 %)
20 diff
(98.1 %id)
BX366203 Placenta Cot 25-normalized .a 2274 to 2964 1 to 688       691/755
(91 %)
24 diff
(96.9 %id)
BG177658 lymph, lymphoma, cell line .a 2275 to 2949 1 to 674       674/674
(100 %)
1 diff
(99.9 %id)
BU195283 melanotic melanoma, skin .a 2278 to 3044 1 to 776       776/883
(87 %)
25 diff
(97.2 %id)
BF794109 lymph, lymphoma, cell line .a 2279 to 3037 1 to 763       763/892
(85 %)
9 diff
(99.0 %id)
CX167245 human embryonic stem cells differentiated toan early endodermal cell type .a 2279 to 3107 1 to 829       829/829
(100 %)
2 diff
(99.8 %id)
TI_44169912   .a 2284 to 3199 77 to 1026       945/1028
(91 %)
81 diff
(92.2 %id)
BQ671079 epidermoid carcinoma, cell line, salivary gland .a 2286 to 3123 1 to 848       848/857
(98 %)
12 diff
(98.6 %id)
BQ961297 carcinoma, cell line, Prostate .a 2286 to 3225 1 to 940       940/1025
(91 %)
41 diff
(96.0 %id)
BI768073 pooled lung and spleen .a 2287 to 3128 1 to 842       842/845
(99 %)
3 diff
(99.7 %id)
BQ050981 leiomyosarcoma, uterus .a 2287 to 2913 12 to 639       628/1007
(62 %)
19 diff
(98.2 %id)
TI_57180440   .a 2287 to 3128 36 to 877       842/880
(95 %)
9 diff
(99.0 %id)
BE781907 eye, retinoblastoma .a 2288 to 2963 20 to 693       674/882
(76 %)
21 diff
(97.7 %id)
BQ691749 ductal carcinoma, cell line, Pancreas .a 2288 to 3132 1 to 855       855/897
(95 %)
16 diff
(98.3 %id)
BQ440499 leiomyosarcoma, uterus .a 2292 to 3149 1 to 868       868/869
(99 %)
19 diff
(97.9 %id)
BE884607 leiomyosarcoma, uterus .a 2299 to 2960 1 to 676       676/699
(96 %)
19 diff
(97.3 %id)
BM006112 hepatocellular carcinoma, cell line, Liver .a 2302 to 2908 1 to 608       608/608
(100 %)
2 diff
(99.7 %id)
TI_59386066   .a 2303 to 2908 101 to 707       607/607
(100 %)
1 diff
(99.9 %id)
AI752743 Bone, Hip .a 2306 to 2698 1 to 393       393/393
(100 %)
4 diff
(99.0 %id)
BF841745 head_neck .a 2314 to 2698 388 to 4     Submitted on the opposite strand 385/388
(99 %)
5 diff
(98.8 %id)
CN308877 embryonic stem cells, cell lines H1, H7, andH9 .a 2321 to 2775 1 to 455       455/455
(100 %)
10 diff
(97.9 %id)
BF530960 anaplastic oligodendroglioma with 1p/19qloss, brain .a 2323 to 3033 18 to 725       708/1097
(64 %)
18 diff
(98.4 %id)
CD689438 normal nasopharynx .a 2326 to 2690 1 to 368       368/368
(100 %)
6 diff
(98.4 %id)
AA025704 heart .a 2332 to 2536 1 to 205       205/205
(100 %)
1 diff
(99.6 %id)
BE884217 leiomyosarcoma, uterus .a 2333 to 2894 1 to 557       557/557
(100 %)
12 diff
(97.9 %id)
BM451785 eye, retinoblastoma .a 2333 to 3310 1 to 982       982/1049
(93 %)
14 diff
(98.7 %id)
CA389773 eye, RPE/choroid .a 2335 to 2938 1 to 604       604/604
(100 %)
0 diff
(100 %id)
BE909917 epithelioid carcinoma, Pancreas .a 2338 to 2926 1 to 588       588/589
(99 %)
5 diff
(99.2 %id)
BF817866 colon_ins .a 2351 to 2710 362 to 2     Submitted on the opposite strand 361/362
(99 %)
3 diff
(99.2 %id)
BE395988 endometrium, adenocarcinoma cell line, uterus .a 2352 to 2968 1 to 617       617/617
(100 %)
0 diff
(100 %id)
BE622189 melanotic melanoma, skin .a 2353 to 2812 1 to 462       462/462
(100 %)
2 diff
(99.6 %id)
BE905773 epithelioid carcinoma, Pancreas .a 2397 to 3158 1 to 757       757/768
(98 %)
10 diff
(98.7 %id)
Z44943 brain, total brain .a 2410 to 2695 1 to 286       286/286
(100 %)
0 diff
(100 %id)
BX442708 brain, fetal brain .a 2425 to 3401 977 to 9       969/980
(98 %)
13 diff
(98.7 %id)
H15344 whole brain .a 2436 to 2776 1 to 342       342/342
(100 %)
2 diff
(99.5 %id)
BF344447 brain, glioblastoma with EGFR amplification .a 2482 to 3194 1 to 712       712/1025
(69 %)
20 diff
(98.1 %id)
BX423624 brain, fetal brain .a 2486 to 3372 887 to 1       887/1037
(85 %)
8 diff
(99.3 %id)
TI_57187174   .a 2501 to 3155 49 to 703       655/655
(100 %)
0 diff
(100 %id)
BI858202 breast, mammary adenocarcinoma, cell line .a 2503 to 3155 1 to 653       653/653
(100 %)
0 diff
(100 %id)
CN308880 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 2521 to 3121 1 to 601       601/601
(100 %)
0 diff
(100 %id)
BF970417 adrenal cortex carcinoma, cell line, adrenal gland .a 2541 to 3338 1 to 798       798/932
(85 %)
15 diff
(98.4 %id)
BU171660 melanotic melanoma, skin .a 2556 to 3428 1 to 881   AAA   881/881
(100 %)
10 diff
(98.9 %id)
AA345553 gall bladder .a 2562 to 2817 1 to 257       257/257
(100 %)
1 diff
(99.7 %id)
BE613934 leiomyosarcoma, uterus .a 2571 to 3315 1 to 742       742/745
(99 %)
14 diff
(98.2 %id)
BE379253 endometrium, adenocarcinoma cell line, uterus .a 2581 to 3218 1 to 639       639/680
(93 %)
8 diff
(98.9 %id)
BF948219 nervous_normal .a 2594 to 3015 3 to 425       423/425
(99 %)
11 diff
(97.5 %id)
AA378558 synovial membrane .a 2613 to 2904 1 to 296       296/296
(100 %)
5 diff
(98.4 %id)
AF111805 heart .a 2627 to 3422 1 to 796   AAA   796/796
(100 %)
2 diff
(99.8 %id)
BI518117 pooled colon, kidney, stomach .a 2632 to 3365 749 to 16   fully sequenced,   734/749
(97 %)
14 diff
(98.2 %id)
TI_45235971   .a 2632 to 3365 749 to 16   fully sequenced,   734/749
(97 %)
14 diff
(98.2 %id)
TI_159723487   .a 2696 to 3428 828 to 96   AAA   733/996
(73 %)
7 diff
(99.3 %id)
CA945047 Human Lung Epithelial cells, lung .a 2696 to 3428 751 to 19   AAA   733/745
(98 %)
7 diff
(99.1 %id)
CB241395 Human Lung Epithelial cells, lung .a 2696 to 3428 750 to 19   AAA   732/732
(100 %)
7 diff
(99.1 %id)
BU629498 cell lines, Chondrosarcoma .a 2715 to 3428 730 to 19   AAA   712/719
(99 %)
5 diff
(99.4 %id)
BU625869 cell lines, Enchondroma .a 2720 to 3428 726 to 19   AAA   708/708
(100 %)
3 diff
(99.6 %id)
BQ014456 Chondrosarcoma, Left Pubic Bone .a 2721 to 3428 726 to 19   AAA   708/708
(100 %)
3 diff
(99.6 %id)
BQ268024 insulinoma, Pancreas .a 2722 to 3287 8 to 573       566/573
(98 %)
6 diff
(99.0 %id)
CK905966 insulinoma, Pancreas .a 2722 to 3295 8 to 581       574/581
(98 %)
6 diff
(99.0 %id)
BX332820 Neuroblastoma Cot 25-normalized .a 2729 to 3388 660 to 1   fully sequenced,   660/660
(100 %)
7 diff
(99.0 %id)
TI_1948100320   .a 2734 to 3400 122 to 789   fully sequenced,   668/789
(84 %)
11 diff
(98.7 %id)
CV029349 mixed .a 2738 to 3222 1 to 487       487/487
(100 %)
3 diff
(99.4 %id)
AI911227 pooled .a 2758 to 3425 675 to 8       668/682
(97 %)
4 diff
(99.5 %id)
BF203211 muscle, rhabdomyosarcoma .a 2767 to 3428 1 to 659   AAA   659/659
(100 %)
8 diff
(98.8 %id)
BG108075 Bone, osteosarcoma, cell line .a 2767 to 3425 1 to 657   AAA   657/732
(89 %)
5 diff
(99.4 %id)
BQ086377 Islets of Langerhans, Pancreas .a 2784 to 2943 1 to 160   fully sequenced,   160/160
(100 %)
0 diff
(100 %id)
AW149618 brain, medulloblastoma .a 2785 to 3432 649 to 1   tiling clone,   649/695
(93 %)
14 diff
(98.0 %id)
AW082806 colon, moderately differentiated adenocarcinoma .a 2788 to 3424 634 to 1       634/635
(99 %)
13 diff
(98.0 %id)
BE139640 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 2788 to 3422 637 to 1       637/639
(99 %)
16 diff
(97.5 %id)
BM703630 eye, human retina .a 2794 to 3066 1 to 273   fully sequenced,   273/273
(100 %)
0 diff
(100 %id)
BP429480   .a 2800 to 3163 7 to 371       365/371
(98 %)
1 diff
(99.8 %id)
BP430641   .a 2800 to 3155 7 to 362       356/362
(98 %)
0 diff
(100 %id)
BM806808 lymph, lymphoma, cell line .a 2801 to 3424 1 to 624   AAA   624/624
(100 %)
1 diff
(99.9 %id)
BU789670 insulinoma, Pancreas .a 2806 to 3428 642 to 20   fully sequenced, AAA   623/623
(100 %)
3 diff
(99.6 %id)
BM975809 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 2809 to 3424 631 to 17   AAA   615/615
(100 %)
7 diff
(98.9 %id)
AI760168 pooled .a 2820 to 3423 610 to 7       604/610
(99 %)
0 diff
(100 %id)
H64785 liver and spleen .a 2821 to 3139 1 to 321   fully sequenced,   321/321
(100 %)
5 diff
(98.5 %id)
TI_1948211933   .a 2821 to 3400 706 to 127   fully sequenced,   580/706
(82 %)
0 diff
(100 %id)
TI_1948212215   .a 2821 to 3400 703 to 123   fully sequenced,   581/703
(82 %)
2 diff
(99.8 %id)
TI_1948212350   .a 2821 to 3400 701 to 122   fully sequenced,   580/701
(82 %)
0 diff
(100 %id)
AW025001 Kidney .a 2823 to 3425 609 to 7       603/609
(99 %)
3 diff
(99.6 %id)
BM707168 eye, eye anterior segment .a 2838 to 3424 1 to 587   fully sequenced, AAA   587/587
(100 %)
6 diff
(99.0 %id)
BU730696 eye, RPE and Choroid .a 2854 to 3424 589 to 19   AAA   571/571
(100 %)
2 diff
(99.7 %id)
AW469544 pooled .a 2856 to 3306 451 to 1       451/451
(100 %)
10 diff
(97.8 %id)
CK905965 insulinoma, Pancreas .a 2868 to 3428 577 to 17   AAA   561/561
(100 %)
2 diff
(99.7 %id)
BM713804 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2874 to 3428 1 to 555   fully sequenced, AAA   555/555
(100 %)
2 diff
(99.7 %id)
BQ102444 Islets of Langerhans, Pancreas .a 2882 to 3424 543 to 1   fully sequenced,   543/543
(100 %)
3 diff
(99.5 %id)
TI_1948212069   .a 2882 to 3400 642 to 124   fully sequenced,   519/642
(80 %)
0 diff
(100 %id)
AI752742 Bone, Hip .a 2888 to 3424 555 to 18   AAA   538/538
(100 %)
6 diff
(98.9 %id)
AI700463 pooled .a 2889 to 3423 541 to 7       535/541
(98 %)
0 diff
(100 %id)
AI936652 anaplastic oligodendroglioma, brain .a 2889 to 3424 536 to 1       536/536
(100 %)
6 diff
(98.9 %id)
BG230765 blood, lymphocyte .a 2895 to 3424 542 to 13   AAA   530/530
(100 %)
2 diff
(99.7 %id)
BQ073269 epidermoid carcinoma, cell line, lung .a 2903 to 3423 1 to 522       522/1296
(40 %)
4 diff
(99.7 %id)
CN308866 embryonic stem cells, cell lines H1, H7, andH9 .a 2906 to 3249 1 to 342       342/342
(100 %)
6 diff
(98.3 %id)
BU527548 epidermoid carcinoma, cell line, lung .a 2911 to 3422 46 to 557   AAA   512/557
(91 %)
8 diff
(98.6 %id)
BM551107 duodenal adenocarcinoma, cell line, small intestine .a 2913 to 3430 1 to 518   AAA   518/518
(100 %)
2 diff
(99.7 %id)
BQ029200 lung, Metastatic Chondrosarcoma .a 2938 to 3428 509 to 19   AAA   491/491
(100 %)
2 diff
(99.6 %id)
BF923986 nervous_tumor .a 2940 to 3366 432 to 7     Submitted on the opposite strand 426/432
(98 %)
0 diff
(100 %id)
AI095901 uterus .a 2944 to 3424 494 to 14   AAA   481/481
(100 %)
4 diff
(99.2 %id)
AI138745   .a 2946 to 3424 492 to 13   AAA   480/480
(100 %)
5 diff
(99.0 %id)
AI554935 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2946 to 3422 477 to 1       477/477
(100 %)
3 diff
(99.4 %id)
DB548118 hippocampus .a 2958 to 3426 1 to 469     Submitted on the opposite strand 469/471
(99 %)
5 diff
(99.0 %id)
DB527203 testis .a 2963 to 3422 1 to 464     Submitted on the opposite strand 464/464
(100 %)
10 diff
(97.9 %id)
AA663409   .a 2963 to 3267 304 to 1       304/304
(100 %)
2 diff
(99.4 %id)
BF886169 testis_normal .a 2972 to 3390 1 to 418       418/418
(100 %)
3 diff
(99.3 %id)
AA084391   .a 2982 to 3398 415 to 1       415/416
(99 %)
7 diff
(98.4 %id)
DB513192 testis .a 2984 to 3428 1 to 444     Submitted on the opposite strand 444/444
(100 %)
9 diff
(98.0 %id)
DB521236 testis .a 2984 to 3422 1 to 439     Submitted on the opposite strand 439/439
(100 %)
3 diff
(99.4 %id)
BQ267774 insulinoma, Pancreas .a 2986 to 3428 459 to 17   AAA   443/443
(100 %)
2 diff
(99.6 %id)
AA838228 epithelium (cell line), Prostate .a 2988 to 3395 409 to 1       409/409
(100 %)
4 diff
(99.1 %id)
DB535940 hippocampus .a 2989 to 3426 1 to 438     Submitted on the opposite strand 438/440
(99 %)
6 diff
(98.7 %id)
AA936697 Kidney .a 2991 to 3424 435 to 1       435/435
(100 %)
10 diff
(97.8 %id)
AA988399 Kidney, kidney tumor .a 2991 to 3395 405 to 1       405/405
(100 %)
4 diff
(99.1 %id)
AI199598 anaplastic oligodendroglioma, brain .a 2991 to 3423 433 to 1       433/433
(100 %)
5 diff
(98.9 %id)
AI277497 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2992 to 3425 434 to 1       434/435
(99 %)
3 diff
(99.4 %id)
BX370115 Placenta Cot 25-normalized .a 2995 to 3428 1 to 433       433/433
(100 %)
6 diff
(98.7 %id)
BX370202 Placenta Cot 25-normalized .a 2995 to 3428 1 to 433       433/433
(100 %)
6 diff
(98.7 %id)
AA931135 pooled germ cell tumors .a 3003 to 3428 425 to 1       425/425
(100 %)
3 diff
(99.3 %id)
AI206725   .a 3003 to 3429 428 to 3       426/428
(99 %)
5 diff
(98.9 %id)
AI241950 brain, tumor, 5 pooled (see description) .a 3003 to 3422 431 to 12   AAA   420/420
(100 %)
4 diff
(99.1 %id)
TI_1948100321   .a 3005 to 3400 527 to 132   fully sequenced,   396/527
(75 %)
0 diff
(100 %id)
BM673196 eye, eye anterior segment .a 3005 to 3424 436 to 17   fully sequenced, AAA   420/420
(100 %)
2 diff
(99.6 %id)
FN075010 breast carcinoma .a 3016 to 3118 103 to 1     Submitted on the opposite strand 103/103
(100 %)
0 diff
(100 %id)
AA401345   .a 3016 to 3429 417 to 4       414/417
(99 %)
0 diff
(100 %id)
BU730081 eye, human retina .a 3020 to 3424 421 to 17   fully sequenced, AAA   405/405
(100 %)
3 diff
(99.3 %id)
BU738877 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3020 to 3428 427 to 19   fully sequenced, AAA   409/409
(100 %)
2 diff
(99.6 %id)
R09749 liver and spleen .a 3033 to 3421 399 to 9       391/428
(91 %)
6 diff
(98.6 %id)
AA618048 lung, lung tumor .a 3038 to 3422 383 to 1       383/383
(100 %)
3 diff
(99.3 %id)
BE763002 nervous_tumor .a 3063 to 3414 1 to 352       352/352
(100 %)
3 diff
(99.2 %id)
BP385175 pancreatic islet .a 3063 to 3373 1 to 312     Submitted on the opposite strand 312/312
(100 %)
3 diff
(99.1 %id)
EC504036 Prostate .a 3073 to 3170 1 to 98       98/98
(100 %)
0 diff
(100 %id)
EC504158 Prostate .a 3073 to 3170 1 to 98       98/98
(100 %)
0 diff
(100 %id)
AI366339 brain, oligodendroglioma .a 3081 to 3425 345 to 1       345/345
(100 %)
5 diff
(98.6 %id)
BP429171   .a 3086 to 3424 1 to 339   AAA   339/339
(100 %)
4 diff
(98.9 %id)
H64022 liver and spleen .a 3109 to 3404 299 to 1   fully sequenced,   299/299
(100 %)
5 diff
(98.4 %id)
Z40694 brain, total brain .a 3161 to 3424 264 to 1       264/264
(100 %)
2 diff
(99.3 %id)
BM053099 Islets of Langerhans, Pancreas .a 3161 to 3425 1 to 265   fully sequenced,   265/265
(100 %)
3 diff
(98.9 %id)
AI963935 pooled germ cell tumors .a 3186 to 3428 243 to 1       243/243
(100 %)
2 diff
(99.2 %id)
BM052793 Islets of Langerhans, Pancreas .a 3192 to 3425 236 to 3   fully sequenced,   234/236
(99 %)
0 diff
(100 %id)
BE262824 brain, neuroblastoma .b 1 to 620 36 to 654   tiling clone, available from MGC,   619/654
(94 %)
6 diff
(99.1 %id)
BC013956 Brain, neuroblastoma .b 5 to 995 1 to 991 T274I H278R tiling clone, available from MGC, AAA   991/991
(100 %)
4 diff
(99.6 %id)
BP296364   .c 1 to 578 1 to 578   tiling clone,   578/578
(100 %)
2 diff
(99.7 %id)
CN308869 embryonic stem cells, cell lines H1, H7, andH9 .c 26 to 275 1 to 250       250/250
(100 %)
5 diff
(98.0 %id)
DB213465 trachea .c 27 to 602 2 to 577   capped   576/576
(100 %)
2 diff
(99.7 %id)
DA567347 heart .c 51 to 615 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA213052 brain .c 172 to 620 2 to 450   capped   449/499
(89 %)
1 diff
(99.8 %id)
DB468593 hippocampus .c 199 to 501 1 to 304       304/388
(78 %)
9 diff
(97.7 %id)
DB479419 hippocampus .c 199 to 672 1 to 474       474/474
(100 %)
1 diff
(99.8 %id)
BC028904 Kidney, hypernephroma .c 261 to 1368 1 to 1108 T234I H238R tiling clone, available from MGC, AAA   1108/1108
(100 %)
2 diff
(99.9 %id)
EL950384 eyeball .c 335 to 806 1 to 472       472/472
(100 %)
4 diff
(99.2 %id)
CD516176 White Matter .d 1 to 782 1 to 788 R213K G216W R217E R218E P219T ... tiling clone,   788/910
(86 %)
31 diff
(96.6 %id)
BP318633 pericardium .e 1 to 582 8 to 589   tiling clone,   582/589
(98 %)
1 diff
(99.9 %id)
BM706318 eye, lens .e 100 to 660 1 to 561   tiling clone,   561/561
(100 %)
0 diff
(100 %id)
BU734697 eye, lens .e 679 to 881 222 to 20   tiling clone, AAA   203/203
(100 %)
2 diff
(99.1 %id)
BX954224   .f 1 to 655 1 to 655 Q16R tiling clone,   655/664
(98 %)
6 diff
(99.1 %id)
DC306717 cerebellum .f 29 to 602 1 to 574       574/574
(100 %)
5 diff
(99.2 %id)
AK293449 cerebellum .f 30 to 1181 1 to 1152   tiling clone,   1152/1152
(100 %)
2 diff
(99.9 %id)
DC302158 cerebellum .f 30 to 591 1 to 562       562/562
(100 %)
2 diff
(99.7 %id)
CD653077 Embryonic Stem cells .f 40 to 813 4 to 771       768/841
(91 %)
23 diff
(97.3 %id)
DC407174 thymus .f 93 to 636 1 to 544       544/544
(100 %)
0 diff
(100 %id)
DC318089 amygdala .f 226 to 819 1 to 594       594/594
(100 %)
0 diff
(100 %id)
CU455048 epidermis .g 1 to 674 19 to 692   tiling clone,   674/692
(97 %)
6 diff
(99.2 %id)
CU456063 epidermis .g 1 to 566 19 to 584       566/584
(96 %)
6 diff
(99.0 %id)
CU454874 epidermis .g 461 to 1060 621 to 22 T129I H133R tiling clone, Submitted on the opposite strand 600/621
(96 %)
3 diff
(99.6 %id)
BG707826 brain, hypothalamus .h 1 to 656 1 to 656 exact tiling clone,   656/656
(100 %)
3 diff
(99.6 %id)
NM_002624.3   .h 4 to 688 1 to 685 exact RefSeq, AAA   685/685
(100 %)
0 diff
(100 %id)
DB499079 hypothalamus .h 6 to 481 1 to 476       476/476
(100 %)
0 diff
(100 %id)
TI_227715795   .h 48 to 686 741 to 102 I5X AAA   640/978
(65 %)
11 diff
(98.9 %id)
TI_227715381   .h 59 to 686 734 to 105 I5X AAA   630/1005
(62 %)
7 diff
(99.4 %id)
CD366897 Alveolar Macrophage, lung .h 65 to 686 641 to 19 I5X AAA   623/624
(99 %)
6 diff
(99.1 %id)
BU570770 testis .h 75 to 685 1 to 610 exact     610/612
(99 %)
5 diff
(99.2 %id)
BU933640 mixed (pool of 40 RNAs) .h 75 to 690 1 to 616 exact     616/788
(78 %)
6 diff
(99.3 %id)
BG566327 Liver .h 77 to 687 1 to 611 K106T I107D D108R L110S T111N ... AAA   611/611
(100 %)
4 diff
(99.4 %id)
AV764568 bone marrow .h 79 to 687 1 to 608 exact     608/610
(99 %)
3 diff
(99.6 %id)
BC003373 Placenta, choriocarcinoma .h 86 to 686 1 to 601 exact available from MGC, AAA   601/601
(100 %)
0 diff
(100 %id)
TI_44345013   .h 87 to 686 165 to 764 exact tiling clone, AAA   600/764
(78 %)
9 diff
(98.9 %id)
BI599791 brain, hypothalamus .h 89 to 686 1 to 598 exact AAA   598/598
(100 %)
5 diff
(99.2 %id)
BE293983 muscle, rhabdomyosarcoma .h 90 to 688 1 to 599 exact AAA   599/599
(100 %)
0 diff
(100 %id)
BI669478 brain, hypothalamus .h 90 to 686 1 to 597 exact AAA   597/597
(100 %)
4 diff
(99.4 %id)
BU602692 mixed (pool of 40 RNAs) .h 92 to 689 1 to 598 exact     598/602
(99 %)
4 diff
(99.4 %id)
BU861117 mixed (pool of 40 RNAs) .h 92 to 688 1 to 597 exact     597/599
(99 %)
4 diff
(99.4 %id)
CD103075 Pooled-Skin .h 92 to 668 1 to 577 S68R     577/578
(99 %)
6 diff
(99.0 %id)
CD520913 pooled .h 92 to 690 1 to 599 exact     599/625
(95 %)
4 diff
(99.4 %id)
BG547715 lung .h 94 to 688 1 to 599 I33D A34C Q35S L36A K37S ... AAA   599/599
(100 %)
5 diff
(99.2 %id)
AK292623 thymus .h 95 to 682 1 to 588 exact     588/588
(100 %)
0 diff
(100 %id)
BC062671 Pooled, 40 cell lines .h 95 to 686 4 to 595 exact available from MGC, AAA   592/592
(100 %)
0 diff
(100 %id)
CD173695 embryonic stem cells, WA01, passage 38 .h 95 to 688 23 to 616 exact AAA   594/616
(96 %)
6 diff
(99.1 %id)
AB055803 senescent fibroblast .h 95 to 690 1 to 596 exact     596/599
(99 %)
2 diff
(99.7 %id)
BG572321 placenta .h 95 to 690 1 to 601 exact     601/784
(76 %)
11 diff
(98.6 %id)
BI668679 brain, hypothalamus .h 95 to 686 8 to 599 exact AAA   592/599
(98 %)
6 diff
(99.0 %id)
TI_44344115   .h 95 to 686 93 to 684 exact AAA   592/684
(86 %)
6 diff
(99.2 %id)
CB108906 Liver .h 95 to 524 1 to 430       430/430
(100 %)
0 diff
(100 %id)
AV760235 bone marrow .h 95 to 685 1 to 591 Y91C AAA   591/591
(100 %)
2 diff
(99.7 %id)
BM817977 stomach .h 95 to 677 1 to 583 exact     583/583
(100 %)
0 diff
(100 %id)
DA529637 brain .h 96 to 686 2 to 592 exact capped, AAA   591/591
(100 %)
0 diff
(100 %id)
DA542796   .h 96 to 650 2 to 557 L53X N54E K55Q S56E N57Q ... capped   556/556
(100 %)
1 diff
(99.9 %id)
DA567197 heart .h 96 to 649 2 to 555 exact capped   554/554
(100 %)
0 diff
(100 %id)
BQ937843 leiomyosarcoma, uterus .h 96 to 687 12 to 603 exact     592/605
(97 %)
1 diff
(99.9 %id)
DA914334   .h 96 to 652 2 to 558 exact capped   557/557
(100 %)
0 diff
(100 %id)
DB106140 thymus .h 96 to 642 2 to 548 exact capped   547/547
(100 %)
0 diff
(100 %id)
DB111896 thymus .h 96 to 679 2 to 585 exact capped   584/584
(100 %)
1 diff
(99.9 %id)
AV711207 adrenal cortico adenoma for Cushing'ssyndrome .h 98 to 687 1 to 589 exact AAA   589/589
(100 %)
4 diff
(99.4 %id)
DB466764 hippocampus .h 98 to 535 1 to 438       438/438
(100 %)
0 diff
(100 %id)
CD521632 pooled .h 98 to 687 1 to 590 exact     590/593
(99 %)
4 diff
(99.4 %id)
CB108011 Liver .h 98 to 642 1 to 545 exact     545/545
(100 %)
0 diff
(100 %id)
TI_149295282   .h 98 to 688 678 to 88 exact AAA   591/957
(61 %)
5 diff
(99.5 %id)
BY795288 eye .h 100 to 683 1 to 583 exact     583/583
(100 %)
1 diff
(99.9 %id)
CF130249 Chondrosarcoma Lung Metastasis cell lines, lung .h 100 to 690 1 to 591 exact     591/592
(99 %)
1 diff
(99.9 %id)
TI_154192193   .h 100 to 690 52 to 642 exact     591/597
(98 %)
1 diff
(99.9 %id)
DA482707   .h 101 to 644 2 to 545 exact capped   544/544
(100 %)
0 diff
(100 %id)
CB138047 Liver .h 101 to 528 1 to 428       428/428
(100 %)
0 diff
(100 %id)
CB139472 Liver .h 101 to 484 1 to 384       384/384
(100 %)
0 diff
(100 %id)
BM781654 Ascites, stomach .h 101 to 690 17 to 608 exact     592/593
(99 %)
4 diff
(99.4 %id)
CD386241 embryonic trophoblasts, made from WA01 stemcells .h 102 to 690 24 to 612 exact     589/650
(90 %)
8 diff
(98.8 %id)
CB111744 Liver .h 102 to 648 1 to 547 exact     547/547
(100 %)
0 diff
(100 %id)
DA779645 brain .h 102 to 676 2 to 577 L36P K37Q V38S V39G Q40T ... capped   576/576
(100 %)
1 diff
(99.9 %id)
DB045369 testis .h 102 to 664 2 to 564 exact capped   563/563
(100 %)
0 diff
(100 %id)
DB254616 uterus .h 102 to 671 2 to 571 exact capped   570/570
(100 %)
0 diff
(100 %id)
BM760375 lymph node, stomach .h 103 to 664 1 to 562 exact     562/562
(100 %)
1 diff
(99.9 %id)
BG387009 adenocarcinoma cell line, colon .h 105 to 686 1 to 582 exact AAA   582/582
(100 %)
1 diff
(99.9 %id)
BG386931 adenocarcinoma cell line, colon .h 105 to 676 1 to 572 exact     572/572
(100 %)
1 diff
(99.9 %id)
BG758641 B-cells, primary B-cells from tonsils (cell line) .h 106 to 688 1 to 583 exact AAA   583/583
(100 %)
0 diff
(100 %id)
CR985962 T-Lymphocytes .h 106 to 688 1 to 583 exact AAA   583/583
(100 %)
0 diff
(100 %id)
CR982011 T-Lymphocytes .h 106 to 685 1 to 580 exact     580/580
(100 %)
0 diff
(100 %id)
CR992795 T-Lymphocytes .h 106 to 686 1 to 581 exact AAA   581/581
(100 %)
0 diff
(100 %id)
BX339616 Placenta Cot 25-normalized .h 107 to 685 1 to 579 exact     579/584
(99 %)
1 diff
(99.9 %id)
BX392941 Placenta Cot 25-normalized .h 107 to 682 571 to 1 exact     571/571
(100 %)
5 diff
(99.2 %id)
BU856739 adenocarcinoma, cell line, breast .h 107 to 688 1 to 582 exact AAA   582/582
(100 %)
0 diff
(100 %id)
CD671656 eye, Iris .h 108 to 689 1 to 581 exact     581/581
(100 %)
1 diff
(99.9 %id)
AW160517 brain, frontal lobe .h 108 to 358 1 to 251   fully sequenced,   251/251
(100 %)
0 diff
(100 %id)
BF974250 B-cells, primary B-cells from tonsils (cell line) .h 108 to 686 1 to 579 exact AAA   579/579
(100 %)
1 diff
(99.9 %id)
BG686883 B-cells, primary B-cells from tonsils (cell line) .h 108 to 691 1 to 584 exact AAA   584/584
(100 %)
2 diff
(99.7 %id)
CN308863 embryonic stem cells, DMSO-treated H9 cellline .h 109 to 313 1 to 205       205/205
(100 %)
0 diff
(100 %id)
EL947523 eyeball .h 109 to 666 1 to 558 exact     558/558
(100 %)
3 diff
(99.5 %id)
BI859333 breast, mammary adenocarcinoma, cell line .h 109 to 686 1 to 580 L10R N11E L12S P13A Q14A ... AAA   580/580
(100 %)
4 diff
(99.4 %id)
CD512227 Pooled-Skin .h 109 to 686 1 to 580 Q149X     580/581
(99 %)
5 diff
(99.2 %id)
CK004839 brain/CNS, Human Brain - Frontal Cortex .h 109 to 689 1 to 581 exact     581/582
(99 %)
2 diff
(99.7 %id)
TI_57190803   .h 109 to 686 53 to 632 L10R N11E L12S P13A Q14A ... AAA   580/580
(100 %)
4 diff
(99.4 %id)
TI_57193733   .h 109 to 690 53 to 634 exact     582/724
(80 %)
2 diff
(99.8 %id)
CR988739 T-Lymphocytes .h 109 to 688 1 to 580 exact AAA   580/580
(100 %)
0 diff
(100 %id)
CR983001 T-Lymphocytes .h 109 to 686 1 to 578 exact AAA   578/578
(100 %)
0 diff
(100 %id)
CT002851 T-Lymphocytes .h 109 to 686 1 to 578 exact AAA   578/578
(100 %)
0 diff
(100 %id)
CR992924 T-Lymphocytes .h 109 to 686 1 to 578 exact AAA   578/578
(100 %)
0 diff
(100 %id)
BM985385 lung .h 109 to 688 596 to 17 exact AAA   580/587
(98 %)
0 diff
(100 %id)
BF725762 eye, Iris .h 110 to 645 1 to 536 exact     536/536
(100 %)
0 diff
(100 %id)
BG621066 placenta .h 111 to 686 1 to 578 Q137H K138E I139D Q140S Q141A ... AAA   578/578
(100 %)
4 diff
(99.4 %id)
BE048197 brain, tumor, 5 pooled (see description) .h 112 to 582 1 to 471       471/471
(100 %)
0 diff
(100 %id)
TI_154144162   .h 112 to 686 80 to 654 exact     575/579
(99 %)
3 diff
(99.5 %id)
BQ286570 Pancreas, Purified pancreatic islet .h 115 to 687 573 to 1 exact     573/573
(100 %)
0 diff
(100 %id)
TI_57185954   .h 115 to 690 56 to 631 exact     576/1042
(55 %)
1 diff
(100.0 %id)
CR597448 Placenta Cot 25-normalized .h 116 to 690 1 to 575 exact     575/575
(100 %)
0 diff
(100 %id)
BX398337 Placenta Cot 25-normalized .h 116 to 690 1 to 575 exact     575/575
(100 %)
0 diff
(100 %id)
AV715159   .h 116 to 691 1 to 576 exact AAA   576/576
(100 %)
0 diff
(100 %id)
TI_153949291   .h 116 to 689 70 to 639 exact     570/574
(99 %)
5 diff
(99.2 %id)
AA339183 brain .h 117 to 306 1 to 190       190/190
(100 %)
2 diff
(99.0 %id)
TI_57191303   .h 117 to 686 53 to 622 exact AAA   570/570
(100 %)
0 diff
(100 %id)
BM822345 stomach .h 117 to 645 1 to 529 exact     529/529
(100 %)
0 diff
(100 %id)
BM797279 Ascites, stomach .h 117 to 686 1 to 570 Q149X AAA   570/570
(100 %)
1 diff
(99.9 %id)
AW778897 colon, moderately-differentiated adenocarcinoma .h 118 to 686 585 to 17 E9K P13R AAA   569/569
(100 %)
3 diff
(99.5 %id)
CR991851 T-Lymphocytes .h 118 to 686 1 to 569 exact AAA   569/569
(100 %)
0 diff
(100 %id)
BQ447320 Knee, Osteoarthritic Cartilage .h 120 to 685 584 to 19 exact AAA   566/575
(98 %)
0 diff
(100 %id)
BT007195   .h 121 to 583 1 to 463       463/465
(99 %)
1 diff
(99.8 %id)
BG110870 Bone, osteosarcoma, cell line .h 121 to 688 1 to 570 A2R Q14A L15A E16R M17N ... AAA   570/570
(100 %)
2 diff
(99.7 %id)
BF684050 leiomyosarcoma cell line, uterus .h 122 to 686 1 to 565   AAA   565/565
(100 %)
3 diff
(99.5 %id)
CN308884 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .h 123 to 684 1 to 562       562/562
(100 %)
0 diff
(100 %id)
CD678514 eye, Trabecular meshwork .h 123 to 631 1 to 509       509/509
(100 %)
0 diff
(100 %id)
BF973484 leiomyosarcoma cell line, uterus .h 123 to 686 1 to 565   AAA   565/565
(100 %)
2 diff
(99.7 %id)
BG420843 Kidney, renal cell adenocarcinoma .h 123 to 688 1 to 566   AAA   566/566
(100 %)
0 diff
(100 %id)
BU500562   .h 123 to 686 1 to 564   AAA   564/564
(100 %)
0 diff
(100 %id)
AA639255 Ewing's sarcoma .h 124 to 684 561 to 1       561/561
(100 %)
4 diff
(99.3 %id)
AI439611 B-cell, chronic lymphotic leukemia .h 124 to 688 583 to 19   AAA   565/565
(100 %)
1 diff
(99.9 %id)
CR977091 T-Lymphocytes .h 124 to 688 1 to 565   AAA   565/565
(100 %)
0 diff
(100 %id)
AA372438 colon .h 125 to 408 1 to 284       284/284
(100 %)
0 diff
(100 %id)
AJ711551 heart .h 125 to 657 1 to 533       533/533
(100 %)
0 diff
(100 %id)
BE897576 melanotic melanoma, skin .h 125 to 688 1 to 564   AAA   564/564
(100 %)
0 diff
(100 %id)
BM479785 embryonal carcinoma, cell line, testis .h 125 to 686 1 to 562       562/562
(100 %)
0 diff
(100 %id)
BQ670867 epidermoid carcinoma, cell line, salivary gland .h 125 to 688 1 to 564   AAA   564/564
(100 %)
0 diff
(100 %id)
AA299148 uterus .h 126 to 384 1 to 259       259/259
(100 %)
0 diff
(100 %id)
BE792953 lung, small cell carcinoma .h 126 to 688 1 to 563       563/563
(100 %)
1 diff
(99.9 %id)
CD105639 brain, Pituitary .h 126 to 690 1 to 565       565/568
(99 %)
2 diff
(99.7 %id)
AI185837 lung .h 127 to 687 562 to 1       562/562
(100 %)
5 diff
(99.2 %id)
AI880623 aorta .h 127 to 686 560 to 1       560/560
(100 %)
2 diff
(99.7 %id)
BE732209 choriocarcinoma, placenta .h 127 to 686 1 to 560   AAA   560/560
(100 %)
0 diff
(100 %id)
BM916238 amelanotic melanoma, cell line, skin .h 128 to 686 11 to 569       559/569
(98 %)
0 diff
(100 %id)
CN308874 embryonic stem cells, DMSO-treated H9 cellline .h 129 to 636 1 to 508       508/508
(100 %)
0 diff
(100 %id)
W80922 heart .h 129 to 255 1 to 127       127/127
(100 %)
0 diff
(100 %id)
BE728908 melanotic melanoma, skin .h 129 to 686 1 to 559   AAA   559/559
(100 %)
1 diff
(99.9 %id)
BI115275 muscle, rhabdomyosarcoma .h 129 to 688 1 to 561   AAA   561/561
(100 %)
3 diff
(99.5 %id)
BF308491 muscle, rhabdomyosarcoma .h 130 to 688 1 to 561   AAA   561/561
(100 %)
4 diff
(99.3 %id)
BF971304 adrenal cortex carcinoma, cell line, adrenal gland .h 130 to 686 1 to 557   AAA   557/557
(100 %)
0 diff
(100 %id)
BG751566 eye, normal pigmented retinal epithelium .h 130 to 686 1 to 558   AAA   558/558
(100 %)
2 diff
(99.7 %id)
BE254106 eye, retinoblastoma .h 131 to 685 1 to 555       555/555
(100 %)
0 diff
(100 %id)
TI_57191561   .h 131 to 690 55 to 614       560/828
(67 %)
1 diff
(99.9 %id)
BE254810 eye, retinoblastoma .h 132 to 495 1 to 364       364/364
(100 %)
0 diff
(100 %id)
BG341518 B-cells, primary B-cells from tonsils (cell line) .h 132 to 687 1 to 557   AAA   557/557
(100 %)
4 diff
(99.3 %id)
BG491129 large cell carcinoma, lung .h 132 to 688 1 to 557   AAA   557/557
(100 %)
1 diff
(99.9 %id)
BE797391 lung, small cell carcinoma .h 133 to 686 1 to 554   AAA   554/554
(100 %)
0 diff
(100 %id)
BQ653854 hepatocellular carcinoma, cell line, Liver .h 133 to 686 1 to 554       554/555
(99 %)
1 diff
(99.9 %id)
CB123147 Liver .h 133 to 528 1 to 396       396/396
(100 %)
0 diff
(100 %id)
CR976159 T-Lymphocytes .h 133 to 686 1 to 554   AAA   554/554
(100 %)
0 diff
(100 %id)
BM699816 eye, lens .h 133 to 358 1 to 226   fully sequenced,   226/226
(100 %)
0 diff
(100 %id)
BE797290 lung, small cell carcinoma .h 134 to 686 1 to 553   AAA   553/553
(100 %)
0 diff
(100 %id)
BI116236 lung, small cell carcinoma .h 135 to 688 1 to 556   AAA   556/556
(100 %)
5 diff
(99.2 %id)
BQ641314 eye, normal pigmented retinal epithelium .h 135 to 690 1 to 556       556/558
(99 %)
3 diff
(99.5 %id)
CA865824 Pancreas, Purified pancreatic islet .h 136 to 358 1 to 223   fully sequenced,   223/223
(100 %)
0 diff
(100 %id)
BE392440 endometrium, adenocarcinoma cell line, uterus .h 138 to 688 1 to 551   AAA   551/551
(100 %)
0 diff
(100 %id)
BU628885 cell lines, Chondrosarcoma .h 139 to 688 568 to 19   AAA   550/550
(100 %)
0 diff
(100 %id)
CD365844 Alveolar Macrophage, lung .h 139 to 686 566 to 19   AAA   548/548
(100 %)
0 diff
(100 %id)
BM904430 leiomyosarcoma, uterus .h 140 to 686 1 to 547   AAA   547/547
(100 %)
0 diff
(100 %id)
AA328418   .h 141 to 446 1 to 306       306/306
(100 %)
0 diff
(100 %id)
CF128949 Chondrosarcoma Lung Metastasis cell lines, lung .h 142 to 586 1 to 445       445/445
(100 %)
0 diff
(100 %id)
CB122569 Liver .h 143 to 685 1 to 543       543/543
(100 %)
0 diff
(100 %id)
BM424196 amelanotic melanoma, cell line, skin .h 144 to 686 1 to 543   AAA   543/543
(100 %)
0 diff
(100 %id)
BM808912 amelanotic melanoma, cell line, skin .h 145 to 686 1 to 542       542/542
(100 %)
0 diff
(100 %id)
AA382688 testis .h 148 to 442 1 to 295       295/295
(100 %)
0 diff
(100 %id)
AA643111 lymph node, lymphoma .h 148 to 687 540 to 1       540/540
(100 %)
0 diff
(100 %id)
AI126765 heart .h 148 to 686 555 to 17   AAA   539/539
(100 %)
0 diff
(100 %id)
DR005381 Prostate .h 156 to 688 1 to 533   AAA   533/533
(100 %)
0 diff
(100 %id)
AA370837 Prostate .h 157 to 318 1 to 162       162/162
(100 %)
0 diff
(100 %id)
AW664340 2 pooled high-grade transitional celltumors, genitourinary tract .h 157 to 580 424 to 1       424/424
(100 %)
0 diff
(100 %id)
H45403 brain .h 162 to 399 1 to 238       238/238
(100 %)
0 diff
(100 %id)
DB258445 uterus .h 171 to 688 2 to 519   capped, AAA   518/518
(100 %)
0 diff
(100 %id)
BE271608 adenocarcinoma cell line, ovary .h 174 to 686 1 to 513   AAA   513/513
(100 %)
0 diff
(100 %id)
BF939860 brain, glioblastoma (pooled) .h 175 to 686 512 to 1       512/512
(100 %)
0 diff
(100 %id)
BF446387 Prostate .h 175 to 686 523 to 12   AAA   512/512
(100 %)
0 diff
(100 %id)
CN308858 embryonic stem cells, cell lines H1, H7, andH9 .h 179 to 528 1 to 350       350/350
(100 %)
0 diff
(100 %id)
BM690589 eye, RPE and Choroid .h 180 to 686 8 to 514   fully sequenced, AAA   507/514
(98 %)
0 diff
(100 %id)
CN308885 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .h 182 to 536 1 to 355       355/355
(100 %)
0 diff
(100 %id)
BQ029277 lung, Metastatic Chondrosarcoma .h 195 to 686 510 to 19   AAA   492/492
(100 %)
0 diff
(100 %id)
FN144403 breast carcinoma .h 209 to 312 104 to 1     Submitted on the opposite strand 104/104
(100 %)
0 diff
(100 %id)
TI_151736108   .h 214 to 686 581 to 109   AAA   473/473
(100 %)
0 diff
(100 %id)
BI859542 breast, mammary adenocarcinoma, cell line .h 215 to 688 1 to 474   AAA   474/474
(100 %)
0 diff
(100 %id)
AI291538 carcinoid, lung .h 223 to 688 479 to 14   AAA   466/466
(100 %)
0 diff
(100 %id)
BU788934 insulinoma, Pancreas .h 233 to 688 475 to 20   AAA   456/456
(100 %)
0 diff
(100 %id)
AI300788 2 pooled tumors (clear cell type), Kidney .h 235 to 684 465 to 16   AAA   450/450
(100 %)
0 diff
(100 %id)
AI523509 aorta .h 242 to 686 445 to 1       445/445
(100 %)
0 diff
(100 %id)
AA378132 synovial membrane .h 244 to 399 1 to 156       156/156
(100 %)
0 diff
(100 %id)
AI306455 2 pooled tumors (clear cell type), Kidney .h 253 to 686 445 to 12   AAA   434/434
(100 %)
0 diff
(100 %id)
AI440051 lymph node, lymphoma, follicular mixed small and largecell .h 256 to 686 431 to 1       431/431
(100 %)
0 diff
(100 %id)
BG563244 Liver .h 258 to 688 1 to 431   AAA   431/431
(100 %)
0 diff
(100 %id)
AA399234   .h 263 to 687 1 to 425       425/425
(100 %)
0 diff
(100 %id)
CB136633 Liver .h 265 to 386 1 to 122       122/122
(100 %)
0 diff
(100 %id)
BQ711578 Spleen .h 267 to 690 1 to 424       424/424
(100 %)
0 diff
(100 %id)
BP393820 pancreatic islet .h 269 to 686 1 to 418     Submitted on the opposite strand 418/418
(100 %)
0 diff
(100 %id)
BU752492 placenta .h 269 to 686 435 to 18   AAA   418/418
(100 %)
0 diff
(100 %id)
AA446453   .h 286 to 688 415 to 13   AAA   403/403
(100 %)
0 diff
(100 %id)
AA595182 Prostate, prostate tumor .h 286 to 686 442 to 42   AAA   401/401
(100 %)
0 diff
(100 %id)
W92940 heart .h 288 to 384 1 to 97   fully sequenced,   97/97
(100 %)
0 diff
(100 %id)
BF589750 sciatic nerve .h 296 to 688 403 to 11   AAA   393/393
(100 %)
0 diff
(100 %id)
AW162131 brain, frontal lobe .h 297 to 690 400 to 7   fully sequenced,   394/400
(98 %)
0 diff
(100 %id)
CA865570 Pancreas, Purified pancreatic islet .h 297 to 690 396 to 3   fully sequenced,   394/396
(99 %)
0 diff
(100 %id)
BM663396 eye, RPE and Choroid .h 297 to 686 407 to 18   fully sequenced, AAA   390/390
(100 %)
0 diff
(100 %id)
CN478458 eye, lens .h 297 to 686 408 to 19   fully sequenced, AAA   390/390
(100 %)
0 diff
(100 %id)
BQ028968 Bone, Subchondral Bone .h 305 to 688 402 to 19   AAA   384/384
(100 %)
0 diff
(100 %id)
AI097465 heart .h 307 to 686 391 to 12   AAA   380/380
(100 %)
0 diff
(100 %id)
BM757732 stomach .h 326 to 686 1 to 361   AAA   361/361
(100 %)
0 diff
(100 %id)
W80821 heart .h 367 to 493 127 to 1       127/127
(100 %)
0 diff
(100 %id)
W92941 heart .h 367 to 490 124 to 1   fully sequenced,   124/124
(100 %)
0 diff
(100 %id)
AA382687 testis .h 419 to 686 268 to 1       268/268
(100 %)
0 diff
(100 %id)
FN055704 breast carcinoma .h 422 to 520 1 to 99       99/99
(100 %)
0 diff
(100 %id)
CR981293 T-Lymphocytes .h 432 to 686 1 to 255   AAA   255/255
(100 %)
0 diff
(100 %id)
AI420175 Prostate .h 462 to 689 228 to 1       228/228
(100 %)
0 diff
(100 %id)
CN308860 embryonic stem cells, cell lines H1, H7, andH9 .h 491 to 686 1 to 196   AAA   196/196
(100 %)
0 diff
(100 %id)
F24198 pectoral muscle (after mastectomy) .h 497 to 681 1 to 185       185/185
(100 %)
0 diff
(100 %id)
BM911878 amelanotic melanoma, cell line, skin .i 1 to 560 1 to 559 exact tiling clone,   559/615
(90 %)
1 diff
(99.9 %id)
CF619194 Pooled Chondrosarcoma Tumor cells .j 1 to 421 1 to 421 D2E S3G T105I H109R tiling clone, AAA   421/421
(100 %)
7 diff
(98.4 %id)
BE222978 brain, oligodendroglioma .k 1 to 513 519 to 7 T100I H104R tiling clone,   513/519
(98 %)
0 diff
(100 %id)
N50809 multiple sclerosis lesions .k 53 to 511 461 to 1 K18E G19R A20C C21M P22S ... tiling clone,   461/461
(100 %)
9 diff
(98.1 %id)
BQ217468 epithelioid carcinoma, Pancreas .k 107 to 514 1 to 408   tiling clone,   408/447
(91 %)
4 diff
(99.2 %id)
NM_145897.2   .l 1 to 550 1 to 550 exact RefSeq, AAA   550/550
(100 %)
0 diff
(100 %id)
BU860687 mixed (pool of 40 RNAs) .l 4 to 552 1 to 557 exact tiling clone,   557/888
(62 %)
17 diff
(98.1 %id)
BM855377 stomach .l 47 to 396 1 to 350       350/350
(100 %)
2 diff
(99.5 %id)
BF683955 leiomyosarcoma cell line, uterus .l 59 to 549 1 to 491 exact tiling clone, AAA   491/491
(100 %)
3 diff
(99.4 %id)
TI_154095007   .l 68 to 548 611 to 131 exact AAA   481/793
(60 %)
3 diff
(99.7 %id)
BQ438429 testis .l 72 to 546 1 to 475 exact     475/478
(99 %)
3 diff
(99.4 %id)
BQ435650 testis .l 72 to 552 1 to 481 exact     481/789
(60 %)
6 diff
(99.3 %id)
BP872271 embryonal kidney .l 75 to 478 1 to 404 exact     404/406
(99 %)
7 diff
(98.3 %id)
BJ996453 hepatoblastoma .l 76 to 514 439 to 1 exact     439/472
(93 %)
4 diff
(99.2 %id)
CD104902 Pooled-Skin .l 79 to 507 1 to 434 D53G A54C K55Q I62M L65S ...     434/483
(89 %)
14 diff
(97.2 %id)
CD386051 embryonic trophoblasts, made from WA01 stemcells .l 83 to 548 9 to 474 D53G AAA   466/474
(98 %)
7 diff
(98.6 %id)
AV717033   .l 87 to 552 1 to 466 exact     466/468
(99 %)
2 diff
(99.6 %id)
FN117443 breast carcinoma .l 88 to 159 1 to 72       72/72
(100 %)
4 diff
(94.5 %id)
BU602680 mixed (pool of 40 RNAs) .l 89 to 551 1 to 463 exact     463/467
(99 %)
5 diff
(99.0 %id)
CB110669 Liver .l 90 to 546 1 to 457 exact     457/457
(100 %)
2 diff
(99.6 %id)
FN050383 breast carcinoma .l 91 to 166 1 to 76       76/76
(100 %)
4 diff
(94.8 %id)
BF185898 brain, glioblastoma .l 91 to 549 1 to 461 F64L     461/691
(66 %)
5 diff
(99.3 %id)
BF246182 brain, glioblastoma .l 91 to 548 1 to 459 L15* AAA   459/459
(100 %)
8 diff
(98.3 %id)
AV756648 bone marrow .l 92 to 506 73 to 479 K71S I72N P74L A75F L76R ...     407/419
(97 %)
12 diff
(97.2 %id)
CD047935 embryonic stem cells, WA01, passage 38 .l 92 to 548 27 to 483 exact AAA   457/483
(94 %)
9 diff
(98.2 %id)
AB055805 germinal center B cell .l 92 to 550 1 to 459 exact AAA   459/459
(100 %)
0 diff
(100 %id)
AV759310 bone marrow .l 92 to 506 1 to 407 K71S I72N P74L A75F L76R ...     407/417
(97 %)
7 diff
(98.4 %id)
CD177461 embryonic trophoblasts, made from WA01 stemcells .l 95 to 548 23 to 476 exact AAA   454/476
(95 %)
7 diff
(98.6 %id)
CB110059 Liver .l 99 to 548 1 to 450 E78D AAA   450/450
(100 %)
4 diff
(99.2 %id)
CB110084 Liver .l 99 to 548 1 to 450 E78D AAA   450/450
(100 %)
4 diff
(99.2 %id)
CR993820 T-Lymphocytes .l 103 to 548 1 to 446 exact AAA   446/446
(100 %)
0 diff
(100 %id)
AJ712722 bone marrow .l 105 to 539 12 to 445 exact     434/445
(97 %)
6 diff
(98.7 %id)
FN137171 breast carcinoma .l 105 to 174 1 to 69       69/69
(100 %)
4 diff
(94.3 %id)
FN150216 breast carcinoma .l 105 to 190 98 to 11     Submitted on the opposite strand 88/98
(89 %)
0 diff
(100 %id)
FN118494 breast carcinoma .l 106 to 169 1 to 63       63/63
(100 %)
3 diff
(95.3 %id)
AV756666 bone marrow .l 108 to 528 89 to 503 K71S I72N P74L A75F L76R ...     415/431
(96 %)
12 diff
(97.3 %id)
BM854835 stomach .l 108 to 548 1 to 441 exact AAA   441/441
(100 %)
2 diff
(99.6 %id)
BM838678 lymph node, stomach .l 109 to 486 1 to 377 N6T I7S T8R E9S L10*     377/377
(100 %)
1 diff
(99.8 %id)
EL951315 eyeball .l 110 to 548 1 to 439 exact AAA   439/439
(100 %)
2 diff
(99.6 %id)
AA287397 germinal center B cell .l 110 to 550 1 to 441 A102R AAA   441/441
(100 %)
3 diff
(99.4 %id)
BU601581 mixed (pool of 40 RNAs) .l 110 to 552 1 to 443 A109T     443/450
(98 %)
4 diff
(99.2 %id)
AW979275   .l 112 to 548 558 to 122 exact AAA Submitted on the opposite strand 437/514
(85 %)
0 diff
(100 %id)
BF686768 leiomyosarcoma cell line, uterus .l 120 to 548 1 to 430   AAA   430/430
(100 %)
1 diff
(99.8 %id)
AA878497 ovary .l 121 to 552 433 to 1       433/433
(100 %)
6 diff
(98.7 %id)
CB124025 Liver .l 128 to 550 1 to 423   AAA   423/423
(100 %)
1 diff
(99.8 %id)
CB125185 Liver .l 128 to 550 1 to 423   AAA   423/423
(100 %)
0 diff
(100 %id)
BQ888608 epidermoid carcinoma, cell line, salivary gland .l 132 to 550 1 to 419   AAA   419/419
(100 %)
0 diff
(100 %id)
CA436662 Bone, Subchondral Bone .l 132 to 548 435 to 19   AAA   417/417
(100 %)
0 diff
(100 %id)
AI865241 lymph node, lymphoma, follicular mixed small and largecell .l 133 to 552 423 to 4       420/423
(99 %)
1 diff
(99.8 %id)
BI835967 pooled pancreas and spleen .l 136 to 548 1 to 412   AAA   412/412
(100 %)
1 diff
(99.8 %id)
TI_57164681   .l 136 to 548 65 to 476   AAA   412/476
(86 %)
10 diff
(97.9 %id)
AI708373 aorta .l 139 to 552 417 to 4       414/417
(99 %)
15 diff
(96.5 %id)
BE787951 large cell carcinoma, lung .l 151 to 548 1 to 398   AAA   398/398
(100 %)
0 diff
(100 %id)
BQ787504 insulinoma, Pancreas .l 155 to 548 8 to 401   fully sequenced, AAA   394/401
(98 %)
9 diff
(97.8 %id)
AI225207 lymph node, lymphoma, follicular mixed small and largecell .l 163 to 550 399 to 12   AAA   388/388
(100 %)
0 diff
(100 %id)
BU070246 insulinoma, Pancreas .l 168 to 548 396 to 16   fully sequenced, AAA   381/381
(100 %)
0 diff
(100 %id)
AV713250   .l 182 to 548 1 to 367       367/367
(100 %)
1 diff
(99.8 %id)
AV746853 Pituitary .l 192 to 457 1 to 259       259/260
(99 %)
4 diff
(98.5 %id)
AI354805 lung .l 195 to 548 372 to 19   AAA   354/354
(100 %)
0 diff
(100 %id)
BF955788 nervous_normal .l 197 to 408 27 to 238       212/249
(85 %)
6 diff
(97.6 %id)
AV721352 hypothalamus .l 198 to 550 1 to 353   AAA   353/353
(100 %)
0 diff
(100 %id)
F27383 pectoral muscle (after mastectomy) .l 205 to 487 1 to 283       283/283
(100 %)
0 diff
(100 %id)
CD512789 brain, Pituitary .l 211 to 550 1 to 340   AAA   340/340
(100 %)
0 diff
(100 %id)
AW606964 head_neck .l 228 to 447 1 to 220       220/220
(100 %)
0 diff
(100 %id)
BE161279 head_neck .l 228 to 447 1 to 220       220/220
(100 %)
0 diff
(100 %id)
BE161291 head_neck .l 228 to 447 220 to 1     Submitted on the opposite strand 220/220
(100 %)
0 diff
(100 %id)
TI_154191966   .l 228 to 548 49 to 369   AAA   321/321
(100 %)
0 diff
(100 %id)
T90296 liver and spleen .l 229 to 400 172 to 1       172/172
(100 %)
0 diff
(100 %id)
CF130053 Chondrosarcoma Lung Metastasis cell lines, lung .l 229 to 548 1 to 320   AAA   320/320
(100 %)
0 diff
(100 %id)
F34803 pectoral muscle (after mastectomy) .l 230 to 541 1 to 312       312/312
(100 %)
0 diff
(100 %id)
AV708768 adrenal gland .l 234 to 548 1 to 315   AAA   315/315
(100 %)
0 diff
(100 %id)
FN143343 breast carcinoma .l 240 to 323 1 to 82       82/83
(98 %)
5 diff
(94.0 %id)
EC537194 Prostate .l 277 to 370 1 to 93       93/102
(91 %)
5 diff
(95.1 %id)
FN057059 breast carcinoma .l 278 to 370 105 to 13     Submitted on the opposite strand 93/105
(88 %)
0 diff
(100 %id)
AA320942 adipose tissue, brown .l 371 to 548 178 to 1       178/178
(100 %)
0 diff
(100 %id)
GD152769   .l 375 to 547 1 to 173   AAA   173/173
(100 %)
1 diff
(99.5 %id)
GD151255   .l 376 to 548 1 to 173   AAA   173/173
(100 %)
4 diff
(97.7 %id)
FN061555 breast carcinoma .l 408 to 503 96 to 1     Submitted on the opposite strand 96/98
(97 %)
2 diff
(98.0 %id)
BQ355465 head_neck .l 418 to 550 1 to 133       133/133
(100 %)
0 diff
(100 %id)
CA335566 anterior rhombomeres 1-4 (4 pooled) .l 420 to 547 1 to 128   AAA   128/128
(100 %)
0 diff
(100 %id)
FN064530 breast carcinoma .l 467 to 530 1 to 63       63/64
(98 %)
2 diff
(96.9 %id)
FN146623 breast carcinoma .l 471 to 530 1 to 61       61/62
(98 %)
2 diff
(96.8 %id)
FN100747 breast carcinoma .l 488 to 549 1 to 63       63/64
(98 %)
3 diff
(95.4 %id)
AV743771 cord Blood .m 1 to 567 47 to 610 exact tiling clone,   572/617
(92 %)
9 diff
(98.6 %id)
TI_154062654   .m 3 to 591 744 to 152   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 502/1069
(46 %)
14 diff
(98.7 %id)
AI859350 serous papillary carcinoma, high grade, 2pooled tumors, uterus .m 218 to 591 378 to 5   tiling clone,   374/378
(98 %)
1 diff
(99.8 %id)
DB087565 testis .n 1 to 569 2 to 571   tiling clone, capped   570/570
(100 %)
2 diff
(99.7 %id)
DB281268 uterus .n 38 to 590 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA370257 thalamus .n 41 to 583 2 to 544   capped   543/550
(98 %)
1 diff
(99.9 %id)
DA959537 Spleen .n 41 to 603 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB131553 thymus .n 41 to 594 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA538251 Kidney .n 58 to 639 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DB160179 thymus .n 58 to 624 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DB238996 trachea .n 58 to 637 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DB158397 thymus .n 60 to 632 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
BM747441 Ascites, stomach .n 63 to 689 1 to 626       626/626
(100 %)
3 diff
(99.6 %id)
DA925933 small intestine .n 64 to 598 2 to 537   capped   536/536
(100 %)
1 diff
(99.9 %id)
DB138109 thymus .n 64 to 594 2 to 533   capped   532/532
(100 %)
2 diff
(99.7 %id)
DB156077 thymus .n 64 to 655 2 to 594   capped   593/593
(100 %)
2 diff
(99.7 %id)
DB235186 trachea .n 73 to 639 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
BM549719 leukocyte .n 74 to 1011 1 to 944 exact tiling clone, AAA   944/1019
(92 %)
26 diff
(97.5 %id)
DA800056 brain .n 75 to 627 2 to 554   capped   553/554
(99 %)
1 diff
(99.9 %id)
DB111243 thymus .n 75 to 654 2 to 581   capped   580/580
(100 %)
2 diff
(99.7 %id)
DB137231 thymus .n 75 to 629 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DB140135 thymus .n 75 to 604 2 to 533   capped   532/532
(100 %)
2 diff
(99.7 %id)
DB148362 thymus .n 75 to 640 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA649013   .n 77 to 651 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
BP872154 embryonal kidney .o 1 to 598 1 to 598 K42M tiling clone,   598/598
(100 %)
1 diff
(99.9 %id)
BU600197 mixed (pool of 40 RNAs) .p -9 to 382 1 to 392 exact tiling clone,   392/862
(45 %)
3 diff
(99.7 %id)
T58685 placenta .p 40 to 383 1 to 348       348/352
(98 %)
9 diff
(97.5 %id)
BF311146 brain, neuroblastoma .p 42 to 381 1 to 340   tiling clone, AAA   340/340
(100 %)
1 diff
(99.8 %id)
AI014731 pooled germ cell tumors .p 95 to 381 287 to 1       287/287
(100 %)
3 diff
(99.0 %id)
DA967486 stomach .q 1 to 573 2 to 574 exact tiling clone, capped   573/573
(100 %)
0 diff
(100 %id)
DA103251 cerebellum .q 16 to 563 2 to 549 T8M capped   548/548
(100 %)
1 diff
(99.9 %id)
DA594883 lung .q 16 to 588 2 to 575 L53X N54E K55Q S56E N57Q ... capped   574/574
(100 %)
1 diff
(99.9 %id)
DB120416 thymus .q 16 to 579 2 to 565 exact capped   564/564
(100 %)
1 diff
(99.9 %id)
DA557967   .q 18 to 582 2 to 566 exact capped   565/565
(100 %)
1 diff
(99.9 %id)
DA364830 subthalamic nucleus .q 22 to 584 2 to 564 exact capped   563/563
(100 %)
0 diff
(100 %id)
DA837234 placenta .q 22 to 582 2 to 562 exact capped   561/561
(100 %)
1 diff
(99.9 %id)
DA946770 Spleen .q 22 to 572 2 to 552 exact capped   551/551
(100 %)
0 diff
(100 %id)
DB107427 thymus .q 22 to 598 2 to 578 exact capped   577/577
(100 %)
0 diff
(100 %id)
CN268350 embryonic stem cells, DMSO-treated H9 cellline .q 40 to 618 1 to 579 exact     579/580
(99 %)
2 diff
(99.7 %id)
DA182805 amygdala .q 82 to 629 2 to 549   tiling clone, capped   548/548
(100 %)
0 diff
(100 %id)
DB130020 thymus .r 1 to 231 2 to 231   tiling clone, capped   230/230
(100 %)
3 diff
(98.7 %id)
W80613 heart .r 1245 to 1615 1 to 372   tiling clone, fully sequenced,   372/372
(100 %)
2 diff
(99.5 %id)
AW385167 head_neck .r 1398 to 1673 1 to 275       275/275
(100 %)
3 diff
(99.0 %id)
AW385160 head_neck .r 1401 to 1676 1 to 275       275/275
(100 %)
3 diff
(99.0 %id)
AW385165 head_neck .r 1401 to 1673 1 to 272       272/272
(100 %)
2 diff
(99.3 %id)
AW580403 head_neck .r 1401 to 1673 1 to 271       271/271
(100 %)
2 diff
(99.3 %id)
AW580405 head_neck .r 1401 to 1673 274 to 1       274/274
(100 %)
2 diff
(99.3 %id)
AW580432 head_neck .r 1401 to 1673 1 to 273       273/273
(100 %)
5 diff
(98.2 %id)
AW607059 head_neck .r 1410 to 1605 10 to 205       196/205
(95 %)
6 diff
(97.1 %id)
DB344516 thymus .r 1425 to 1965 542 to 1 L29A T30H A31S L32P A34G ... tiling clone,   542/542
(100 %)
1 diff
(99.9 %id)
W80614 heart .r 1585 to 1967 384 to 1 T30D A31D L32P A34G A35S ... tiling clone, fully sequenced,   384/384
(100 %)
5 diff
(98.7 %id)
DA068462 cerebellum .s 1 to 562 2 to 564   tiling clone, capped   563/563
(100 %)
1 diff
(99.9 %id)
CB961563 placenta, pre-eclamptic placenta .s 19 to 579 25 to 588       564/862
(65 %)
23 diff
(97.4 %id)
CB988381 Human Placenta, placenta .s 19 to 728 19 to 734       716/735
(97 %)
19 diff
(97.5 %id)
CB988972 Human Placenta, placenta .s 19 to 631 19 to 631       613/674
(90 %)
10 diff
(98.6 %id)
TI_57182510   .s 44 to 864 60 to 885 Y21V Y22L V23C E24R K25E ...     826/885
(93 %)
21 diff
(97.7 %id)
BP872625 embryonal kidney .s 45 to 627 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DA483786 brain .s 46 to 458 2 to 414   capped   413/413
(100 %)
0 diff
(100 %id)
DA073537 cerebellum .s 48 to 614 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DB478159 hippocampus .s 48 to 531 1 to 484       484/484
(100 %)
0 diff
(100 %id)
BI769490 pooled lung and spleen .s 51 to 864 1 to 819 Y21V Y22L V23C E24R K25E ...     819/819
(100 %)
16 diff
(98.1 %id)
DA068963 cerebellum .s 52 to 525 2 to 475   capped   474/475
(99 %)
2 diff
(99.6 %id)
DA487651 brain .s 52 to 625 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
AA295597 Pancreas .s 59 to 363 1 to 309       309/310
(99 %)
10 diff
(96.8 %id)
CB958355 Pooled-Glandular .s 59 to 857 1 to 802 G18X D29X A30C K31Q F34L ...     802/802
(100 %)
8 diff
(99.1 %id)
CR996833 T-Lymphocytes .s 59 to 719 1 to 660       660/660
(100 %)
1 diff
(99.9 %id)
BG684962 B-cells, primary B-cells from tonsils (cell line) .s 61 to 938 1 to 579   AAA   560/579
(96 %)
11 diff
(98.2 %id)
BM769990 stomach .s 62 to 647 1 to 586       586/586
(100 %)
0 diff
(100 %id)
BM825598 stomach .s 62 to 532 1 to 472       472/472
(100 %)
1 diff
(99.8 %id)
BM825599 stomach .s 62 to 511 1 to 450       450/450
(100 %)
0 diff
(100 %id)
BM795658 stomach .s 62 to 627 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DA649279   .s 63 to 606 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
TI_57168610   .s 66 to 689 60 to 686       627/686
(91 %)
21 diff
(97.0 %id)
BI833044 pooled pancreas and spleen .s 73 to 689 1 to 620       620/620
(100 %)
15 diff
(97.6 %id)
BI758104 brain .s 75 to 888 1 to 816   tiling clone,   816/816
(100 %)
2 diff
(99.8 %id)
TI_57216247   .s 75 to 888 34 to 849       816/849
(96 %)
8 diff
(99.1 %id)
BF342605 brain, glioblastoma with EGFR amplification .s 87 to 901 1 to 831 Y22*     831/850
(97 %)
44 diff
(94.9 %id)
CN268352 embryonic stem cells, cell lines H1, H7, andH9 .s 131 to 486 1 to 356       356/356
(100 %)
1 diff
(99.8 %id)
CN268351 embryonic stem cells, cell lines H1, H7, andH9 .s 147 to 684 1 to 538       538/538
(100 %)
0 diff
(100 %id)
BM760467 lymph node, stomach .s 221 to 625 1 to 405       405/405
(100 %)
0 diff
(100 %id)
BM841871 lymph node, stomach .s 221 to 804 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
BM841734 lymph node, stomach .s 221 to 802 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BM842076 lymph node, stomach .s 221 to 804 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
BM838738 lymph node, stomach .s 222 to 775 1 to 553       553/553
(100 %)
3 diff
(99.5 %id)
BM844252 lymph node, stomach .s 239 to 735 1 to 497       497/497
(100 %)
0 diff
(100 %id)
BF740707 bocio_tumor .s 240 to 653 10 to 423       414/423
(97 %)
8 diff
(98.2 %id)
BF884584 lung_tumor .s 240 to 371 9 to 138       130/143
(90 %)
9 diff
(93.8 %id)
BM838627 lymph node, stomach .s 306 to 422 1 to 116       116/116
(100 %)
2 diff
(98.3 %id)
BF904164 marrow .s 339 to 813 554 to 81     Submitted on the opposite strand 474/554
(85 %)
30 diff
(94.6 %id)
AW879532 ovary .s 387 to 725 11 to 355       345/355
(97 %)
8 diff
(97.8 %id)
AW879534 ovary .s 387 to 725 11 to 355       345/355
(97 %)
8 diff
(97.8 %id)
FN131943 breast carcinoma .s 388 to 499 1 to 112       112/112
(100 %)
4 diff
(96.5 %id)
AA430731 ovarian tumor, ovary .s 398 to 610 1 to 212   fully sequenced,   212/212
(100 %)
1 diff
(99.6 %id)
BF841852 head_neck .s 401 to 747 1 to 347       347/347
(100 %)
4 diff
(98.9 %id)
BF354259 head_neck .s 494 to 643 35 to 185       151/185
(81 %)
7 diff
(96.3 %id)
BF887816 testis_normal .s 526 to 660 147 to 3     Submitted on the opposite strand 156/147
(106 %)
56 diff
(62.0 %id)
BF888961 testis_normal .s 526 to 664 155 to 22     Submitted on the opposite strand 141/155
(90 %)
0 diff
(100 %id)
BF920280 nervous_tumor .s 526 to 660 152 to 4     Submitted on the opposite strand 158/152
(103 %)
60 diff
(60.6 %id)
AA430379 ovarian tumor, ovary .s 549 to 942 399 to 6   tiling clone, fully sequenced,   394/399
(98 %)
0 diff
(100 %id)
CN300044 embryonic stem cells, cell lines H1, H7, andH9 .t-u 1 to 452 1 to 452 R12G L13W E14S C15A S16V ... tiling clone,   452/452
(100 %)
5 diff
(98.9 %id)
AI879000 brain, frontal lobe .t-u 168 to 742 1 to 575   tiling clone,   575/575
(100 %)
1 diff
(99.9 %id)
BF805870 colon_ins .t-u 282 to 494 213 to 2     Submitted on the opposite strand 212/213
(99 %)
0 diff
(100 %id)
BF847009 lung_normal .t-u 282 to 621 9 to 347       339/349
(97 %)
7 diff
(98.0 %id)
BF850725 lung_normal .t-u 287 to 605 366 to 42     Submitted on the opposite strand 325/380
(85 %)
0 diff
(100 %id)
BF808557 colon_ins .t-u 319 to 523 22 to 227       206/227
(90 %)
6 diff
(97.4 %id)
BU853053 testis .u 1 to 597 1 to 607 T42A K43Q Q44A M45D E46G ... tiling clone,   607/807
(75 %)
22 diff
(97.3 %id)
BU601113 mixed (pool of 40 RNAs) .u 19 to 596 1 to 578 exact tiling clone,   578/578
(100 %)
3 diff
(99.5 %id)
BF830132 head_normal .u 33 to 163 6 to 135       130/146
(89 %)
8 diff
(94.6 %id)
BG755740 B-cells, primary B-cells from tonsils (cell line) .u 42 to 598 1 to 555 A27V E28R D29M A30P K31R ... tiling clone, AAA   555/555
(100 %)
10 diff
(98.2 %id)
AI052773 B-cell, chronic lymphotic leukemia .u 180 to 600 432 to 12 exact AAA   421/421
(100 %)
1 diff
(99.8 %id)
DA337320 hippocampus .va 1 to 588 2 to 589 exact tiling clone, capped   588/588
(100 %)
0 diff
(100 %id)
R23438 whole brain .va 33 to 432 1 to 401 exact     401/403
(99 %)
5 diff
(98.8 %id)
BG168859 hypernephroma, cell line, Kidney .vb 1 to 567 3 to 569 exact tiling clone, AAA   569/569
(100 %)
0 diff
(100 %id)
FN111673 breast carcinoma .vb 238 to 325 1 to 85       85/94
(90 %)
3 diff
(96.9 %id)
AB055804 placenta .vc 1 to 559 2 to 560 exact tiling clone, AAA   560/560
(100 %)
0 diff
(100 %id)
H03166 placenta .vc 13 to 489 1 to 486 M45X M58I K59E Q60T A61G ...     486/487
(99 %)
15 diff
(97.0 %id)
DW411991 Liver .vc 14 to 322 18 to 326       309/326
(94 %)
7 diff
(97.9 %id)
CN268353 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .vc 48 to 340 1 to 293       293/293
(100 %)
0 diff
(100 %id)
TI_45213155   .vd -8 to 556 112 to 676 exact tiling clone, AAA   565/676
(83 %)
7 diff
(99.0 %id)
BI598853 brain, hypothalamus .vd 1 to 556 7 to 562 exact AAA   562/562
(100 %)
6 diff
(99.0 %id)
BU535372 mixed (pool of 40 RNAs) .vd 1 to 554 5 to 558 exact tiling clone,   558/831
(67 %)
12 diff
(98.6 %id)
AV761032 bone marrow .vd 1 to 554 2 to 554 exact AAA   554/554
(100 %)
3 diff
(99.5 %id)
AV716082   .ve 1 to 399 2 to 400 Q80* tiling clone,   400/400
(100 %)
1 diff
(99.8 %id)
EH334157   .ve 42 to 115 1 to 74       74/74
(100 %)
2 diff
(97.3 %id)
AI680953 carcinoid, lung .vf-u 1 to 297 15 to 313 R18K L19G L20Y T21* tiling clone, Submitted on the opposite strand 299/313
(95 %)
6 diff
(98.1 %id)
BF088844 head_neck .vf-u 28 to 254 225 to 1   tiling clone,   225/227
(99 %)
8 diff
(96.5 %id)
AI243967 Kidney Gene PFDN5andC12orf10, variant not shown              
AI275531 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus Gene PFDN5andC12orf10, variant not shown              
DB158632 thymus Gene PFDN5andC12orf10, variant not shown       capped      
DB346681 thymus Gene PFDN5andC12orf10, variant not shown              
TI_151710155   Gene PFDN5andC12orf10, variant not shown       AAA This clone was ignored    
141 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t-u, .u, .va, .vb, .vc, .vd, .ve, .vf-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI