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Gene PARVBTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
307 supporting clones for gene PARVB back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
R06059 liver and spleen .a 1 to 384 2 to 392   tiling clone,   392/464
(84 %)
10 diff
(97.9 %id)
R32918 placenta .a 4 to 253 1 to 257       257/261
(98 %)
9 diff
(96.6 %id)
R05953 liver and spleen .a 1545 to 1872 332 to 1   tiling clone,   332/377
(88 %)
13 diff
(96.6 %id)
R32817 placenta .a 1583 to 1880 303 to 1   tiling clone,   303/500
(60 %)
5 diff
(99.0 %id)
AF303887 skeletal muscle .b 1 to 1569 14 to 1582 N21K W37R V91A tiling clone,   1569/1589
(98 %)
10 diff
(99.4 %id)
BG743702 skin .b 83 to 862 1 to 783   tiling clone,   783/788
(99 %)
9 diff
(98.9 %id)
NM_001003828.1   .b 83 to 1867 1 to 1785 exact RefSeq, AAA   1785/1785
(100 %)
0 diff
(100 %id)
CD624785   .b 333 to 582 250 to 1       250/250
(100 %)
5 diff
(98.0 %id)
CD624786   .b 333 to 582 1 to 250       250/251
(99 %)
8 diff
(96.9 %id)
CD624789   .b 333 to 582 250 to 1       250/250
(100 %)
7 diff
(97.2 %id)
CD624790   .b 333 to 582 1 to 250       250/251
(99 %)
8 diff
(96.9 %id)
BE788751 large cell carcinoma, lung .b 342 to 854 150 to 688       537/1192
(45 %)
42 diff
(96.5 %id)
AA157396   .b 429 to 631 7 to 213   tiling clone,   207/213
(97 %)
12 diff
(94.4 %id)
CD624799   .b 433 to 1003 8 to 580       573/586
(97 %)
9 diff
(98.5 %id)
AA181053   .b 435 to 1060 1 to 624     Submitted on the opposite strand 624/626
(99 %)
6 diff
(99.1 %id)
BM807199 duodenal adenocarcinoma, cell line, small intestine .b 440 to 1372 12 to 954       943/1021
(92 %)
33 diff
(96.8 %id)
BU585240   .b 442 to 1069 1 to 627       627/684
(91 %)
16 diff
(97.7 %id)
BG914022 anaplastic oligodendroglioma with 1p/19qloss, brain .b 442 to 1154 10 to 723       714/723
(98 %)
7 diff
(99.1 %id)
CD624791   .b 464 to 582 1 to 119       119/120
(99 %)
2 diff
(98.4 %id)
CD624792   .b 464 to 582 119 to 1       119/119
(100 %)
1 diff
(99.2 %id)
CD624788   .b 477 to 582 1 to 106       106/107
(99 %)
5 diff
(95.4 %id)
CD624787   .b 484 to 582 99 to 1       99/106
(93 %)
0 diff
(100 %id)
BU789585 insulinoma, Pancreas .b 488 to 927 1 to 440     Submitted on the opposite strand 440/440
(100 %)
0 diff
(100 %id)
H55609   .b 503 to 605 1 to 103       103/103
(100 %)
0 diff
(100 %id)
BQ367791 placenta_normal .b 533 to 941 20 to 428       409/435
(94 %)
13 diff
(97.1 %id)
BP317661 pericardium .b 535 to 1115 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BM694470 eye, RPE and Choroid .b 542 to 1060 1 to 519   fully sequenced,   519/519
(100 %)
0 diff
(100 %id)
CD515533 White Matter .b 550 to 1317 1 to 775       775/919
(84 %)
9 diff
(99.1 %id)
BG744468 blood, natural killer cells, cell line .b 583 to 1243 1 to 659       659/660
(99 %)
5 diff
(99.3 %id)
BM916999 blood, natural killer cells, cell line .b 586 to 1428 1 to 843       843/1110
(75 %)
6 diff
(99.5 %id)
BX425478 neuroblastoma .b 606 to 1571 968 to 1       968/968
(100 %)
22 diff
(97.8 %id)
CN304478 embryonic stem cells, DMSO-treated H9 cellline .b 623 to 968 1 to 346       346/346
(100 %)
1 diff
(99.8 %id)
BU584562   .b 655 to 1048 1 to 397       397/397
(100 %)
4 diff
(99.0 %id)
TI_59394266   .b 659 to 1436 81 to 859       779/782
(99 %)
6 diff
(99.3 %id)
BM015898 breast, mammary adenocarcinoma, cell line .b 660 to 1436 1 to 778       778/781
(99 %)
6 diff
(99.3 %id)
CD624809   .b 670 to 1003 340 to 6       334/347
(96 %)
0 diff
(100 %id)
CD624795   .b 681 to 1003 325 to 3       323/333
(96 %)
2 diff
(99.4 %id)
CD624796   .b 681 to 1003 9 to 329       321/335
(95 %)
9 diff
(97.4 %id)
CD624802   .b 685 to 1006 1 to 322       322/324
(99 %)
5 diff
(98.5 %id)
CD624776   .b 731 to 1003 1 to 273       273/279
(97 %)
13 diff
(95.4 %id)
CD624775   .b 747 to 1003 260 to 4       257/276
(93 %)
0 diff
(100 %id)
CF455856 peripheral nervous system .b 779 to 1538 38 to 793       756/793
(95 %)
18 diff
(97.8 %id)
BX393460 Neuroblastoma Cot 10-normalized .b 824 to 1861 1037 to 1   tiling clone,   1037/1037
(100 %)
3 diff
(99.8 %id)
CD624816   .b 826 to 994 167 to 1       167/169
(98 %)
16 diff
(90.6 %id)
CD624815   .b 853 to 994 1 to 142       142/143
(99 %)
2 diff
(98.7 %id)
CD624818   .b 853 to 1003 152 to 3       150/152
(98 %)
0 diff
(100 %id)
CD624820   .b 853 to 1003 154 to 4       151/154
(98 %)
0 diff
(100 %id)
CD624822   .b 853 to 1003 156 to 6       150/156
(96 %)
0 diff
(100 %id)
CD624824   .b 853 to 1003 154 to 4       151/154
(98 %)
0 diff
(100 %id)
BM826008 Ascites, stomach .b 859 to 1288 1 to 430       430/430
(100 %)
1 diff
(99.8 %id)
BX110557 liver and spleen .b 863 to 1572 1 to 710   AAA   710/710
(100 %)
4 diff
(99.5 %id)
BX449503 brain, fetal brain .b 864 to 1443 16 to 595       580/971
(59 %)
17 diff
(98.3 %id)
BX432270 neuroblastoma .b 872 to 1826 954 to 1   tiling clone,   954/963
(99 %)
6 diff
(99.4 %id)
BQ269137 Pancreas, Purified pancreatic islet .b 878 to 1205 1 to 328   fully sequenced,   328/328
(100 %)
0 diff
(100 %id)
BX407121 neuroblastoma .b 879 to 1571 16 to 708       693/708
(97 %)
18 diff
(97.5 %id)
BX367469 Neuroblastoma Cot 50-normalized .b 885 to 1565 1 to 681       681/918
(74 %)
40 diff
(95.7 %id)
H55693   .b 922 to 1072 1 to 151       151/151
(100 %)
0 diff
(100 %id)
BM696204 eye, human retina .b 934 to 1205 1 to 272   fully sequenced,   272/272
(100 %)
0 diff
(100 %id)
BU782820 insulinoma, Pancreas .b 944 to 1570 642 to 16   AAA   627/627
(100 %)
0 diff
(100 %id)
BM353521 Pancreas, Purified pancreatic islet .b 948 to 1565 618 to 1       618/618
(100 %)
13 diff
(97.9 %id)
BX451221 brain, fetal brain .b 949 to 1517 1 to 572       572/572
(100 %)
6 diff
(99.0 %id)
BX451222 brain, fetal brain .b 950 to 1453 1 to 505       505/505
(100 %)
4 diff
(99.3 %id)
BU740475 eye, fetal eye .b 957 to 1570 632 to 19   AAA   614/614
(100 %)
0 diff
(100 %id)
R79741 placenta .b 960 to 1391 1 to 444       442/444
(99 %)
25 diff
(94.4 %id)
BM264006 Pancreas, Purified pancreatic islet .b 968 to 1572 605 to 1       605/605
(100 %)
1 diff
(99.9 %id)
EL948712 eyeball .b 973 to 1450 1 to 478       478/480
(99 %)
6 diff
(98.8 %id)
BI832545 pooled pancreas and spleen .b 985 to 1441 1 to 456       456/785
(58 %)
8 diff
(99.0 %id)
TI_57162112   .b 985 to 1441 35 to 490       456/819
(55 %)
17 diff
(98.0 %id)
CR619856 HeLa cells Cot 25-normalized .b 1002 to 1569 1 to 568       568/568
(100 %)
0 diff
(100 %id)
BX349798   .b 1002 to 1550 549 to 1       549/549
(100 %)
1 diff
(99.9 %id)
BX349799   .b 1002 to 1569 1 to 568       568/568
(100 %)
0 diff
(100 %id)
BX400742   .b 1002 to 1569 1 to 568       568/568
(100 %)
2 diff
(99.7 %id)
AW300982 colon, moderately differentiated adenocarcinoma .b 1002 to 1570 572 to 4       569/656
(86 %)
12 diff
(98.2 %id)
BM997888 lung, Lung Focal Fibrosis .b 1003 to 1570 586 to 19   AAA   568/585
(97 %)
1 diff
(99.9 %id)
BX400741   .b 1004 to 1531 527 to 1       527/527
(100 %)
13 diff
(97.6 %id)
R10625 liver and spleen .b 1004 to 1293 1 to 302   fully sequenced,   302/302
(100 %)
6 diff
(98.1 %id)
W86706 liver and spleen .b 1004 to 1278 1 to 281   fully sequenced,   281/281
(100 %)
3 diff
(99.0 %id)
CK821461 Pancreas, Purified pancreatic islet .b 1016 to 1566 580 to 30   AAA Submitted on the opposite strand 551/551
(100 %)
9 diff
(98.4 %id)
BE904889 epithelioid carcinoma, Pancreas .b 1017 to 1446 1 to 431       431/645
(66 %)
6 diff
(99.1 %id)
AI052260 liver and spleen .b 1028 to 1570 549 to 7       543/549
(98 %)
7 diff
(98.8 %id)
BU731091 eye, RPE and Choroid .b 1030 to 1573 560 to 19   fully sequenced, AAA   542/542
(100 %)
4 diff
(99.3 %id)
AW772541 hepatic adenoma, Liver .b 1041 to 1395 1 to 355       355/360
(98 %)
7 diff
(98.1 %id)
BU789857 insulinoma, Pancreas .b 1043 to 1570 554 to 28   AAA Submitted on the opposite strand 527/527
(100 %)
5 diff
(99.1 %id)
BM931271 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1048 to 1452 1 to 404       404/404
(100 %)
1 diff
(99.8 %id)
AJ710293 heart .b 1050 to 1408 1 to 359       359/359
(100 %)
1 diff
(99.8 %id)
BQ188006 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1060 to 1205 11 to 156   fully sequenced,   146/156
(93 %)
0 diff
(100 %id)
BQ681194 melanotic melanoma, cell line, skin .b 1063 to 1365 1 to 303       303/303
(100 %)
1 diff
(99.7 %id)
BX352416   .b 1077 to 1568 488 to 1       488/495
(98 %)
26 diff
(94.8 %id)
AI095515 uterus .b 1087 to 1566 497 to 18   AAA   480/488
(98 %)
11 diff
(97.8 %id)
BF000778 malignant melanoma, metastatic to lymphnode, skin .b 1091 to 1570 479 to 1       479/479
(100 %)
34 diff
(93.0 %id)
BF333745 colon_est .b 1099 to 1461 61 to 423       363/423
(85 %)
7 diff
(98.4 %id)
M85753   .b 1103 to 1479 377 to 1       377/377
(100 %)
0 diff
(100 %id)
AI014910   .b 1106 to 1565 461 to 2       460/461
(99 %)
1 diff
(99.8 %id)
AW075607 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .b 1106 to 1570 466 to 2       465/466
(99 %)
7 diff
(98.5 %id)
BU596960 mixed (pool of 40 RNAs) .b 1114 to 1570 1 to 457       457/884
(51 %)
4 diff
(99.6 %id)
BI860718 breast, mammary adenocarcinoma, cell line .b 1120 to 1454 1 to 335       335/364
(92 %)
2 diff
(99.5 %id)
TI_57192292   .b 1120 to 1454 49 to 383       335/364
(92 %)
2 diff
(99.5 %id)
BU754397 placenta .b 1133 to 1573 459 to 19   AAA   441/441
(100 %)
0 diff
(100 %id)
BP390375 pancreatic islet .b 1134 to 1570 1 to 438     Submitted on the opposite strand 438/441
(99 %)
2 diff
(99.6 %id)
F37567 pectoral muscle (after mastectomy) .b 1135 to 1520 7 to 392       386/392
(98 %)
0 diff
(100 %id)
BP389656 pancreatic islet .b 1142 to 1569 1 to 428     Submitted on the opposite strand 428/434
(98 %)
2 diff
(99.6 %id)
BQ268871 Pancreas, Purified pancreatic islet .b 1144 to 1582 439 to 1   fully sequenced,   439/439
(100 %)
0 diff
(100 %id)
BM664478 eye, human retina .b 1144 to 1572 447 to 19   fully sequenced, AAA   429/429
(100 %)
0 diff
(100 %id)
BQ185188 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1144 to 1570 445 to 19   fully sequenced, AAA   427/427
(100 %)
0 diff
(100 %id)
BP392700 pancreatic islet .b 1145 to 1569 1 to 427     Submitted on the opposite strand 427/427
(100 %)
2 diff
(99.6 %id)
AI078029 liver and spleen .b 1148 to 1572 426 to 2       425/426
(99 %)
1 diff
(99.8 %id)
BI833219 pooled pancreas and spleen .b 1163 to 1453 1 to 291       291/347
(83 %)
1 diff
(99.8 %id)
TI_57165916   .b 1163 to 1453 30 to 320       291/376
(77 %)
1 diff
(99.8 %id)
H55198   .b 1175 to 1247 1 to 73       73/73
(100 %)
0 diff
(100 %id)
F27948 pectoral muscle (after mastectomy) .b 1186 to 1528 6 to 349       344/349
(98 %)
7 diff
(98.0 %id)
AW014232   .b 1195 to 1570 393 to 18   AAA   376/376
(100 %)
2 diff
(99.5 %id)
W86572 liver and spleen .b 1217 to 1570 355 to 1   fully sequenced,   355/355
(100 %)
4 diff
(98.9 %id)
AI688769 colon .b 1217 to 1572 358 to 3       356/358
(99 %)
0 diff
(100 %id)
BX400796   .b 1229 to 1569 26 to 366       341/366
(93 %)
7 diff
(98.1 %id)
T30762 adrenal gland .b 1241 to 1443 1 to 203       203/203
(100 %)
0 diff
(100 %id)
BM689481 eye, Retina Foveal and Macular .b 1242 to 1583 1 to 342   fully sequenced, AAA   342/342
(100 %)
3 diff
(99.2 %id)
R10626 liver and spleen .b 1263 to 1566 310 to 1   fully sequenced,   310/310
(100 %)
11 diff
(96.5 %id)
AA082114   .b 1266 to 1570 1 to 303       303/312
(97 %)
4 diff
(98.8 %id)
BM661478 eye, Retina Foveal and Macular .b 1293 to 1552 260 to 1   fully sequenced,   260/260
(100 %)
0 diff
(100 %id)
EC473259 Prostate .b 1342 to 1440 1 to 99       99/99
(100 %)
3 diff
(97.0 %id)
AI561246 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 1350 to 1570 228 to 8       221/228
(96 %)
0 diff
(100 %id)
BM992388 Bone, Subchondral Bone .b 1446 to 1570 143 to 19   AAA   125/125
(100 %)
0 diff
(100 %id)
BQ023391 placenta .b 1450 to 1573 142 to 19   AAA   124/124
(100 %)
0 diff
(100 %id)
CB044150 colon, juvenile granulosa tumor .c 1 to 673 5 to 677       673/677
(99 %)
8 diff
(98.9 %id)
BG434789 placenta .c 3 to 584 1 to 588       588/711
(82 %)
21 diff
(97.1 %id)
BQ943048 large cell carcinoma, lung .c 4 to 754 1 to 754       649/1035
(62 %)
25 diff
(97.6 %id)
BP339885 Spleen .c 4 to 584 1 to 579   tiling clone,   579/582
(99 %)
7 diff
(98.8 %id)
DB461258 testis .c 8 to 494 1 to 487       487/487
(100 %)
2 diff
(99.6 %id)
DR007031 Spleen .c 8 to 678 1 to 670       670/670
(100 %)
12 diff
(98.3 %id)
TI_45236480   .c 15 to 760 49 to 804       756/973
(77 %)
33 diff
(96.7 %id)
BX425479 neuroblastoma .c 16 to 1132 1 to 1110       1110/1110
(100 %)
22 diff
(98.1 %id)
CR597010 Neuroblastoma Cot 25-normalized .c 16 to 1680 1 to 1665 exact     1665/1665
(100 %)
0 diff
(100 %id)
CR606501 Placenta Cot 25-normalized .c 16 to 1372 1 to 1357 exact     1357/1357
(100 %)
0 diff
(100 %id)
CR622038 neuroblastoma .c 16 to 1409 1 to 1394 exact     1394/1394
(100 %)
0 diff
(100 %id)
BX393461 Neuroblastoma Cot 10-normalized .c 16 to 991 1 to 975       975/975
(100 %)
11 diff
(98.9 %id)
BX333668 Neuroblastoma Cot 25-normalized .c 16 to 872 1 to 857   fully sequenced,   857/857
(100 %)
4 diff
(99.6 %id)
BX359082 Placenta Cot 25-normalized .c 16 to 810 1 to 794   fully sequenced,   794/794
(100 %)
4 diff
(99.5 %id)
TI_57150932   .c 16 to 829 62 to 879       818/879
(93 %)
12 diff
(98.7 %id)
TI_57232710   .c 16 to 766 27 to 772       746/792
(94 %)
23 diff
(97.1 %id)
NM_013327.3   .c 16 to 1705 1 to 1690 exact RefSeq, AAA   1690/1690
(100 %)
0 diff
(100 %id)
BI762557 pooled colon, kidney, stomach .c 19 to 829 1 to 815       815/815
(100 %)
11 diff
(98.7 %id)
BI907303 leukocyte .c 19 to 766 1 to 743       743/763
(97 %)
23 diff
(97.0 %id)
BG760305 melanotic melanoma, high MDR (cell line), skin .c 20 to 815 1 to 796       796/797
(99 %)
4 diff
(99.5 %id)
BG770586 melanotic melanoma, high MDR (cell line), skin .c 20 to 903 1 to 891   available from MGC,   889/896
(99 %)
24 diff
(97.4 %id)
BG769003 melanotic melanoma, high MDR (cell line), skin .c 20 to 746 1 to 728       728/730
(99 %)
9 diff
(98.8 %id)
CR620083 Placenta Cot 25-normalized .c 21 to 1647 1 to 1627 exact     1627/1627
(100 %)
0 diff
(100 %id)
BX338979 Placenta Cot 25-normalized .c 21 to 760 1 to 739       739/739
(100 %)
5 diff
(99.4 %id)
BX393388 Placenta Cot 25-normalized .c 21 to 385 365 to 1       365/365
(100 %)
7 diff
(98.1 %id)
BC017461 Skin, melanotic melanoma, high MDR. .c 21 to 1408 1 to 1388 V58A available from MGC, AAA   1388/1388
(100 %)
2 diff
(99.9 %id)
BI517618 pooled colon, kidney, stomach .c 21 to 760 1 to 750       750/919
(81 %)
33 diff
(96.5 %id)
BM546914 ovary (pool of 3) .c 23 to 915 1 to 900       900/1036
(86 %)
12 diff
(98.9 %id)
BM848106 myeloma .c 28 to 375 1 to 348       348/348
(100 %)
3 diff
(99.2 %id)
AK313957 colon, tumor tissue .c 30 to 1162 1 to 1133 V58A     1133/1133
(100 %)
1 diff
(100.0 %id)
CB106655 Liver .c 30 to 450 1 to 421       421/422
(99 %)
7 diff
(98.4 %id)
DB011040 colon, tumor tissue .c 31 to 556 2 to 527   capped   526/526
(100 %)
1 diff
(99.9 %id)
CN304477 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 32 to 567 1 to 536       536/536
(100 %)
1 diff
(99.9 %id)
BP193612 brain .c 34 to 615 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
DB010438 colon, tumor tissue .c 37 to 606 2 to 577   capped   574/576
(99 %)
10 diff
(98.3 %id)
BC046103 Brain, adult, 6 pooled whole brains .c 38 to 1705 1 to 1668 V58A tiling clone, available from MGC, AAA   1668/1668
(100 %)
3 diff
(99.9 %id)
BQ880003 dorsal root ganglia .c 42 to 766 1 to 727       727/983
(73 %)
10 diff
(99.0 %id)
CR610431 Neuroblastoma Cot 10-normalized .c 43 to 1714 1 to 1672 exact     1672/1672
(100 %)
0 diff
(100 %id)
CR626839 fetal brain .c 43 to 1710 1 to 1668 exact     1668/1668
(100 %)
0 diff
(100 %id)
BX331637 Neuroblastoma Cot 10-normalized .c 43 to 905 1 to 862       862/862
(100 %)
4 diff
(99.6 %id)
BX440817 brain, fetal brain .c 43 to 910 1 to 869       869/869
(100 %)
3 diff
(99.7 %id)
BM919344 pooled pancreas and spleen .c 44 to 1013 20 to 998       979/1045
(93 %)
32 diff
(97.0 %id)
CR621262 HeLa cells Cot 25-normalized .c 45 to 1670 1 to 1626 exact     1626/1626
(100 %)
0 diff
(100 %id)
BX401283   .c 45 to 810 1 to 765   fully sequenced,   765/765
(100 %)
3 diff
(99.7 %id)
BI835857 pooled pancreas and spleen .c 45 to 779 1 to 733       733/745
(98 %)
6 diff
(99.2 %id)
TI_57166347   .c 45 to 779 36 to 768       733/780
(93 %)
10 diff
(98.8 %id)
BM545952 ovary (pool of 3) .c 58 to 915 72 to 930       859/1172
(73 %)
17 diff
(98.6 %id)
BQ053976 blood, natural killer cells, cell line .c 58 to 915 1 to 861       861/1027
(83 %)
14 diff
(98.7 %id)
AB048276   .c 59 to 1400 1 to 1342 exact AAA   1342/1342
(100 %)
1 diff
(100.0 %id)
AF237769   .c 59 to 1705 1 to 1647 exact AAA   1647/1647
(100 %)
0 diff
(100 %id)
CD624783   .c 62 to 420 358 to 1       358/358
(100 %)
3 diff
(99.2 %id)
CD624784   .c 62 to 420 1 to 358       358/359
(99 %)
4 diff
(98.9 %id)
CD624781   .c 63 to 420 1 to 358       358/359
(99 %)
8 diff
(97.8 %id)
CR622750 neuroblastoma .c 64 to 1682 1 to 1619 exact     1619/1619
(100 %)
0 diff
(100 %id)
BX432271 neuroblastoma .c 64 to 1011 1 to 947       947/947
(100 %)
5 diff
(99.5 %id)
BX432272 neuroblastoma .c 64 to 760 1 to 698       698/698
(100 %)
19 diff
(97.3 %id)
CD624782   .c 70 to 420 350 to 1       350/357
(98 %)
4 diff
(98.9 %id)
CN304476 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 70 to 237 1 to 168       168/168
(100 %)
0 diff
(100 %id)
AL159142   .c 94 to 1717 1 to 1624   tiling clone,   1624/1624
(100 %)
0 diff
(100 %id)
CR620643 Neuroblastoma Cot 50-normalized .c 99 to 1685 1 to 1587       1587/1587
(100 %)
0 diff
(100 %id)
BX334216 Neuroblastoma Cot 50-normalized .c 99 to 1014 1 to 915       917/915
(100 %)
8 diff
(99.2 %id)
BX345267 Neuroblastoma Cot 50-normalized .c 99 to 900 1 to 801       801/809
(99 %)
4 diff
(99.6 %id)
BX465035 placenta .c 99 to 841 1 to 744       744/810
(91 %)
16 diff
(98.1 %id)
EL734624 mixed .c 110 to 766 1 to 656       656/657
(99 %)
8 diff
(98.8 %id)
CD624773   .c 128 to 841 1 to 712       712/718
(99 %)
15 diff
(98.0 %id)
BG106476 lymph, lymphoma, cell line .c 152 to 907 1 to 756       754/906
(83 %)
14 diff
(98.5 %id)
BU170483 epithelioid carcinoma, Pancreas .c 158 to 766 1 to 610       610/756
(80 %)
10 diff
(98.7 %id)
BX359081 Placenta Cot 25-normalized .c 761 to 1372 613 to 1   fully sequenced,   613/613
(100 %)
3 diff
(99.6 %id)
BX384550   .c 761 to 1670 911 to 1   fully sequenced,   911/911
(100 %)
2 diff
(99.8 %id)
BX331636 Neuroblastoma Cot 10-normalized .c 779 to 1689 911 to 1       911/911
(100 %)
0 diff
(100 %id)
BX334215 Neuroblastoma Cot 50-normalized .c 779 to 1685 911 to 1       911/911
(100 %)
33 diff
(96.4 %id)
BX338978 Placenta Cot 25-normalized .c 779 to 1647 868 to 1       868/868
(100 %)
14 diff
(98.4 %id)
BX333667 Neuroblastoma Cot 25-normalized .c 811 to 1667 883 to 14   fully sequenced,   870/883
(98 %)
3 diff
(99.7 %id)
T39668 fetal spleen, Spleen .c 824 to 1111 1 to 288       288/288
(100 %)
1 diff
(99.7 %id)
BX345266 Neuroblastoma Cot 50-normalized .c 847 to 1575 832 to 96       711/832
(85 %)
4 diff
(99.6 %id)
CB044149 colon, juvenile granulosa tumor .c 849 to 1394 592 to 47   AAA   546/546
(100 %)
18 diff
(96.8 %id)
BI518337 pooled colon, kidney, stomach .c 896 to 1636 758 to 12       745/758
(98 %)
6 diff
(99.3 %id)
TI_45236481   .c 896 to 1636 758 to 12       745/758
(98 %)
6 diff
(99.3 %id)
BU149432 melanotic melanoma, cell line, skin .c 901 to 1580 1 to 688       688/957
(71 %)
16 diff
(98.4 %id)
BU194501 melanotic melanoma, cell line, skin .c 901 to 1716 1 to 818       818/890
(91 %)
18 diff
(98.0 %id)
BQ681527 melanotic melanoma, cell line, skin .c 901 to 1704 1 to 804       804/810
(99 %)
4 diff
(99.6 %id)
BU167963 melanotic melanoma, cell line, skin .c 908 to 1553 8 to 655       648/946
(68 %)
12 diff
(98.8 %id)
TI_154110590   .c 911 to 1705 871 to 86   AAA   786/944
(83 %)
17 diff
(98.2 %id)
BY996860   .c 932 to 1566 1 to 635       635/635
(100 %)
0 diff
(100 %id)
BQ224783 large cell carcinoma, lung .c 1001 to 1704 1 to 706       706/897
(78 %)
5 diff
(99.5 %id)
BX416546 neuroblastoma .c 1011 to 1682 675 to 1       675/675
(100 %)
32 diff
(95.3 %id)
BQ717674 sympathetic trunk .c 1011 to 1706 22 to 718   AAA   697/718
(97 %)
14 diff
(98.1 %id)
BG762551 melanotic melanoma, high MDR (cell line), skin .c 1029 to 1510 1 to 483       483/484
(99 %)
6 diff
(98.8 %id)
BG763612 melanotic melanoma, high MDR (cell line), skin .c 1029 to 1460 1 to 434       434/434
(100 %)
7 diff
(98.4 %id)
N72759 multiple sclerosis lesions .c 1034 to 1282 1 to 250   fully sequenced,   250/250
(100 %)
6 diff
(97.6 %id)
CB121735 Liver .c 1036 to 1549 1 to 514       514/514
(100 %)
2 diff
(99.7 %id)
N59812 multiple sclerosis lesions .c 1252 to 1711 463 to 1   fully sequenced,   463/463
(100 %)
3 diff
(99.4 %id)
EC558147 Prostate .c 1419 to 1524 1 to 107       107/107
(100 %)
1 diff
(99.1 %id)
AI678124 Prostate .c 1425 to 1714 290 to 1       290/290
(100 %)
1 diff
(99.7 %id)
CA308417 Alveolar Macrophage, lung .c 1434 to 1714 296 to 16   AAA   281/281
(100 %)
0 diff
(100 %id)
AI675149 Prostate .c 1488 to 1613 126 to 1       126/126
(100 %)
5 diff
(96.1 %id)
EC541698 Prostate .c 1591 to 1704 113 to 3       111/113
(98 %)
0 diff
(100 %id)
EC564711 Prostate .c 1591 to 1710 121 to 5       117/121
(96 %)
0 diff
(100 %id)
T40719 fetal spleen, Spleen .c 1643 to 1710 71 to 4       68/71
(95 %)
0 diff
(100 %id)
CR604955 Placenta Cot 25-normalized .d 1 to 1591 1 to 1591 exact tiling clone,   1591/1591
(100 %)
0 diff
(100 %id)
BX381894 Placenta Cot 25-normalized .d 1 to 733 1 to 733   fully sequenced,   733/733
(100 %)
3 diff
(99.6 %id)
BC039811 Blood, adult leukocytes .d 57 to 1628 1 to 1572   tiling clone, available from MGC, AAA   1572/1572
(100 %)
2 diff
(99.9 %id)
BQ073061 leukocyte .d 58 to 936 1 to 878   available from MGC,   878/1056
(83 %)
11 diff
(99.0 %id)
BX381893 Placenta Cot 25-normalized .d 684 to 1591 906 to 1   fully sequenced,   906/906
(100 %)
15 diff
(98.4 %id)
BM723057 eye, fetal eye .e 1 to 636 1 to 636   tiling clone,   636/636
(100 %)
1 diff
(99.9 %id)
BM677507 eye, fetal eye .e 1136 to 1738 621 to 19   tiling clone, AAA   603/603
(100 %)
3 diff
(99.6 %id)
AK308443 uterus .f 1 to 1111 2 to 1112 V6A tiling clone,   1112/1112
(100 %)
3 diff
(99.8 %id)
DB279113 uterus .f 1 to 540 2 to 541   capped   540/540
(100 %)
2 diff
(99.7 %id)
CD624774   .f 73 to 738 667 to 1       667/716
(93 %)
2 diff
(99.8 %id)
CD624800   .f 164 to 739 576 to 1       576/583
(98 %)
2 diff
(99.7 %id)
CD624807   .f 172 to 740 1 to 569       569/569
(100 %)
0 diff
(100 %id)
CD624808   .f 172 to 739 568 to 1       568/568
(100 %)
0 diff
(100 %id)
CD624813   .f 172 to 740 1 to 568       568/568
(100 %)
1 diff
(99.9 %id)
CD624814   .f 172 to 739 568 to 1       568/568
(100 %)
0 diff
(100 %id)
CD624793   .f 274 to 737 464 to 1       464/471
(98 %)
0 diff
(100 %id)
CD624794   .f 274 to 740 8 to 474       467/474
(98 %)
6 diff
(98.8 %id)
CD624805   .f 347 to 739 393 to 1       393/393
(100 %)
0 diff
(100 %id)
CD624806   .f 347 to 740 1 to 394       394/394
(100 %)
0 diff
(100 %id)
CD624810   .f 401 to 740 8 to 347       340/347
(97 %)
6 diff
(98.3 %id)
CD624801   .f 416 to 737 322 to 1       322/322
(100 %)
3 diff
(99.1 %id)
CD624797   .f 478 to 740 18 to 281       264/281
(93 %)
6 diff
(97.9 %id)
CD624798   .f 478 to 739 262 to 1       262/279
(93 %)
1 diff
(99.7 %id)
CD624771   .f 495 to 737 243 to 1       243/243
(100 %)
0 diff
(100 %id)
CD624772   .f 495 to 740 1 to 246       246/246
(100 %)
0 diff
(100 %id)
CD624803   .f 526 to 740 1 to 215       215/215
(100 %)
5 diff
(97.7 %id)
CD624804   .f 533 to 739 207 to 1       207/214
(96 %)
0 diff
(100 %id)
CD624821   .f 573 to 740 7 to 173       167/173
(96 %)
6 diff
(96.6 %id)
CD624817   .f 584 to 740 1 to 157       157/157
(100 %)
0 diff
(100 %id)
CD624819   .f 584 to 740 1 to 157       157/157
(100 %)
0 diff
(100 %id)
CD624823   .f 584 to 740 1 to 157       157/157
(100 %)
0 diff
(100 %id)
CD624779   .f 593 to 740 11 to 158       148/158
(93 %)
6 diff
(96.3 %id)
CD624780   .f 593 to 739 147 to 1       147/157
(93 %)
0 diff
(100 %id)
TI_154044426   .f 663 to 1529 936 to 89   tiling clone, AAA   848/915
(92 %)
34 diff
(96.3 %id)
CD624778   .f 672 to 740 23 to 91       69/91
(75 %)
6 diff
(93.5 %id)
CD624812   .f 672 to 740 23 to 91       69/91
(75 %)
6 diff
(93.5 %id)
BM925636 brain .g 1 to 789 14 to 823 V58A K123E E214G E224G A232M ... tiling clone,   810/1065
(76 %)
24 diff
(97.8 %id)
BX428254 brain, fetal brain .g 11 to 857 1 to 868 V58A R168P W169V S170E V171R ... tiling clone,   868/868
(100 %)
18 diff
(98.0 %id)
BI821603 pooled brain, lung, testis .h 1 to 844 1 to 852 Q40R V56A E101A E102G R103E ... tiling clone,   852/853
(99 %)
29 diff
(96.7 %id)
TI_57199294   .h 1 to 844 68 to 919 Q40R V56A E101A E102G R103E ...     852/920
(92 %)
34 diff
(96.4 %id)
CB995214 placenta, pre-eclamptic placenta .i 1 to 741 28 to 773 V56A L131P N132E V133C A134G ... tiling clone,   746/776
(96 %)
24 diff
(97.0 %id)
BM145839 leukopheresis .j 1 to 546 41 to 585 K17I V34K E35K E36G R37W ... tiling clone,   546/585
(93 %)
29 diff
(95.1 %id)
BE703280 nervous_normal .k 1 to 594 13 to 608 L10H K12Q L13A G15R T16H ... tiling clone,   596/613
(97 %)
12 diff
(98.1 %id)
AK309987   .l 1 to 887 2 to 888 V58A tiling clone,   888/888
(100 %)
2 diff
(99.8 %id)
DA882159   .l 1 to 559 2 to 561 R36L E37R V38G S39E D40* capped   560/560
(100 %)
5 diff
(99.2 %id)
BM148000 leukopheresis .l 583 to 918 361 to 30   tiling clone,   332/406
(81 %)
0 diff
(100 %id)
BM264309 Pancreas, Purified pancreatic islet .m 1 to 633 13 to 645 N41F tiling clone,   633/645
(98 %)
8 diff
(98.8 %id)
CA775660 Pancreas, Purified pancreatic islet .m 22 to 487 1 to 466   fully sequenced,   466/466
(100 %)
1 diff
(99.8 %id)
BU786009 Pancreas, Purified pancreatic islet .m 29 to 414 1 to 386   fully sequenced,   386/386
(100 %)
5 diff
(98.8 %id)
BU947323 insulinoma, Pancreas .m 32 to 530 38 to 536   tiling clone,   499/536
(93 %)
6 diff
(98.9 %id)
CA950182 Pancreas, Purified pancreatic islet .m 33 to 414 1 to 382   fully sequenced,   382/382
(100 %)
3 diff
(99.3 %id)
CA952786 Pancreas, Purified pancreatic islet .m 55 to 487 1 to 433   fully sequenced,   433/433
(100 %)
0 diff
(100 %id)
BU786315 Pancreas, Purified pancreatic islet .m 58 to 414 1 to 357   fully sequenced,   357/357
(100 %)
0 diff
(100 %id)
BM510981 insulinoma, Pancreas .m 99 to 414 23 to 337   fully sequenced,   315/337
(93 %)
6 diff
(98.3 %id)
CK821460 Pancreas, Purified pancreatic islet .m 110 to 534 1 to 425 G54V N124H   Submitted on the opposite strand 425/425
(100 %)
3 diff
(99.3 %id)
BM353793 Pancreas, Purified pancreatic islet .m 118 to 535 1 to 418 exact     418/418
(100 %)
0 diff
(100 %id)
CA841277 Pancreas, Purified pancreatic islet .m 118 to 551 1 to 434 exact     434/436
(99 %)
1 diff
(99.8 %id)
CA950511 Pancreas, Purified pancreatic islet .m 118 to 583 1 to 466 exact     466/466
(100 %)
0 diff
(100 %id)
BM510734 insulinoma, Pancreas .m 353 to 781 444 to 16   fully sequenced, AAA   429/429
(100 %)
0 diff
(100 %id)
BU785686 Pancreas, Purified pancreatic islet .m 353 to 777 425 to 1   fully sequenced,   425/425
(100 %)
0 diff
(100 %id)
BU784589 Pancreas, Purified pancreatic islet .m 353 to 777 425 to 1   fully sequenced,   425/425
(100 %)
0 diff
(100 %id)
CA943953 Pancreas, Purified pancreatic islet .m 353 to 779 428 to 2   fully sequenced,   427/428
(99 %)
0 diff
(100 %id)
CA775367 Pancreas, Purified pancreatic islet .m 426 to 1077 652 to 1   tiling clone, fully sequenced,   652/652
(100 %)
1 diff
(99.9 %id)
CA952581 Pancreas, Purified pancreatic islet .m 433 to 779 350 to 4   fully sequenced,   347/350
(99 %)
0 diff
(100 %id)
BU786112 insulinoma, Pancreas .m 618 to 1076 475 to 17   tiling clone, AAA   459/459
(100 %)
0 diff
(100 %id)
CD511276 Blood vessels - aorta, basilar and artery .n-u 1 to 652 1 to 658 S88C F115L tiling clone,   658/752
(87 %)
14 diff
(98.2 %id)
BF849850 lung_normal .n-u 353 to 933 578 to 1   tiling clone, Submitted on the opposite strand 578/578
(100 %)
6 diff
(99.0 %id)
T52139 fetal spleen, Spleen .n-u 486 to 836 1 to 355   tiling clone,   355/359
(98 %)
5 diff
(98.7 %id)
BF848375 lung_normal .n-u 506 to 921 416 to 1   tiling clone, Submitted on the opposite strand 416/416
(100 %)
4 diff
(99.1 %id)
T52026 fetal spleen, Spleen .n-u 922 to 1399 488 to 12   tiling clone,   477/488
(97 %)
0 diff
(100 %id)
BU584613 muscle .o 1 to 509 520 to 1 K22N N23H C24L R25H R26G ... tiling clone,   516/520
(99 %)
22 diff
(95.8 %id)
H55521   .p 1 to 196 1 to 196 exact tiling clone,   196/208
(94 %)
0 diff
(100 %id)
AA431157   .q 1 to 421 1 to 420   tiling clone, fully sequenced,   420/420
(100 %)
8 diff
(98.1 %id)
AA432178   .q 391 to 801 415 to 5   tiling clone, fully sequenced,   411/415
(99 %)
0 diff
(100 %id)
BU618088 Bone, Subchondral Bone .r 1 to 664 681 to 19 exact tiling clone, AAA   663/663
(100 %)
2 diff
(99.7 %id)
BX428253 brain, fetal brain .s-u 1 to 634 633 to 1 E9K P20Q S22A Q23R A24R ... tiling clone,   633/699
(90 %)
19 diff
(97.3 %id)
TI_154115964   .s-u 3 to 629 743 to 124 S28F D34E H36Y P37F H38P ... AAA   620/749
(82 %)
47 diff
(93.8 %id)
CD370206 Alveolar Macrophage, lung .s-u 25 to 629 623 to 19 exact tiling clone, AAA   605/605
(100 %)
0 diff
(100 %id)
CA411749 Chondrosarcoma Grade II, Left Pelvis .s-u 28 to 629 620 to 19 V15M AAA   602/602
(100 %)
1 diff
(99.9 %id)
BQ182952 Chondrosarcoma, Left Pubic Bone .s-u 37 to 629 611 to 19 exact AAA   593/593
(100 %)
0 diff
(100 %id)
BM691341 eye, RPE and Choroid .s-u 91 to 585 1 to 495 exact     495/495
(100 %)
7 diff
(98.6 %id)
AA187563   .s-u 109 to 634 531 to 4     Submitted on the opposite strand 528/531
(99 %)
0 diff
(100 %id)
BP389801 pancreatic islet .s-u 130 to 603 1 to 475     Submitted on the opposite strand 475/475
(100 %)
2 diff
(99.6 %id)
BI966218 Islets of Langerhans, Pancreas .s-u 132 to 445 1 to 314       314/314
(100 %)
2 diff
(99.4 %id)
AA541639 normal prostate, Prostate .s-u 145 to 641 502 to 6   tiling clone,   497/513
(96 %)
0 diff
(100 %id)
DB526670 testis .s-u 163 to 629 1 to 466     Submitted on the opposite strand 466/466
(100 %)
5 diff
(99.0 %id)
AI934566 2 pooled tumors (clear cell type), Kidney .s-u 165 to 634 469 to 1       469/469
(100 %)
5 diff
(99.0 %id)
AI591109 normal gingiva (cell line from immortalizedkeratinocytes) .s-u 190 to 629 442 to 3       440/442
(99 %)
0 diff
(100 %id)
AI754438 bone marrow stroma .s-u 206 to 629 443 to 20   AAA   424/424
(100 %)
0 diff
(100 %id)
AW043703 pooled .s-u 207 to 630 424 to 1       424/424
(100 %)
1 diff
(99.8 %id)
TI_151737478   .s-u 207 to 641 533 to 99       435/692
(62 %)
0 diff
(100 %id)
T48378 fetal spleen, Spleen .s-u 213 to 627 413 to 1       413/415
(99 %)
4 diff
(99.1 %id)
AI202207 Prostate .s-u 228 to 629 401 to 1       401/407
(98 %)
9 diff
(97.8 %id)
BP389881 pancreatic islet .s-u 231 to 600 1 to 372     Submitted on the opposite strand 372/374
(99 %)
3 diff
(99.2 %id)
AW841491 colon_normal .s-u 233 to 389 39 to 195       157/195
(80 %)
6 diff
(97.0 %id)
AI803436   .s-u 233 to 629 426 to 30   AAA   397/397
(100 %)
1 diff
(99.8 %id)
BX430130 neuroblastoma .s-u 248 to 632 1 to 391     Submitted on the opposite strand 391/399
(97 %)
24 diff
(94.0 %id)
AA235867 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .s-u 249 to 632 384 to 2       383/384
(99 %)
0 diff
(100 %id)
EC499938 Prostate .s-u 283 to 384 1 to 102       102/102
(100 %)
3 diff
(97.1 %id)
AA912921 pooled .s-u 301 to 634 337 to 4       334/337
(99 %)
0 diff
(100 %id)
F25335 pectoral muscle (after mastectomy) .s-u 303 to 633 1 to 331       331/331
(100 %)
0 diff
(100 %id)
AA788580   .s-u 305 to 633 330 to 1       330/330
(100 %)
1 diff
(99.7 %id)
AI769365 2 pooled tumors (clear cell type), Kidney .s-u 307 to 632 328 to 1       328/328
(100 %)
2 diff
(99.4 %id)
AA938241 2 pooled tumors (clear cell type), Kidney .s-u 325 to 632 308 to 1       308/308
(100 %)
2 diff
(99.4 %id)
F35741 pectoral muscle (after mastectomy) .s-u 339 to 617 1 to 279       279/279
(100 %)
0 diff
(100 %id)
BU584130 lung .t-u 1 to 541 1 to 544   tiling clone,   544/544
(100 %)
5 diff
(99.1 %id)
BU584162 brain .t-u 116 to 630 515 to 1 W20R tiling clone,   515/515
(100 %)
2 diff
(99.7 %id)
CV353711 stomach_normal .u-u 1 to 342 11 to 350 L52Q G58* tiling clone,   340/361
(94 %)
6 diff
(98.4 %id)
BG011919 placenta_normal Gene PARVB, variant not shown         This clone was ignored    
AF151814   Gene PARVB, variant not shown         This clone was ignored    
N73272 melanocyte Gene PARVB, variant not shown         This clone was ignored    
W02112 melanocyte Gene PARVB, variant not shown         This clone was ignored    
AI767211 2 pooled tumors (clear cell type), Kidney Gene PARVB, variant not shown         Suspected internal deletion, this clone was ignored    
BQ632373 Pancreas, Purified pancreatic islet Gene PARVB, variant not shown         This clone was ignored    
BQ632664 Pancreas, Purified pancreatic islet Gene PARVB, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n-u, .o, .p, .q, .r, .s-u, .t-u, .u-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI