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Gene MTPAPTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
269 supporting clones for gene MTPAP back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB041101 testis .a 1 to 547 2 to 548   tiling clone, capped   547/547
(100 %)
2 diff
(99.7 %id)
DB054642 testis .a 25 to 602 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
DB448883 testis .a 60 to 498 1 to 439       439/439
(100 %)
8 diff
(98.2 %id)
DB020847 testis .a 61 to 619 2 to 560   capped   559/559
(100 %)
6 diff
(99.0 %id)
DB020976 testis .a 61 to 617 2 to 561   capped   560/560
(100 %)
5 diff
(99.2 %id)
DB022012 testis .a 61 to 621 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
DB023494 testis .a 61 to 606 2 to 547   capped   546/546
(100 %)
2 diff
(99.7 %id)
DB028752 testis .a 61 to 648 2 to 589   capped   588/588
(100 %)
2 diff
(99.7 %id)
DB049456 testis .a 61 to 625 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB051062 testis .a 61 to 626 2 to 567   capped   566/566
(100 %)
3 diff
(99.5 %id)
DB054357 testis .a 61 to 634 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DB055309 testis .a 61 to 610 2 to 551   capped   550/550
(100 %)
2 diff
(99.7 %id)
DB055769 testis .a 61 to 615 2 to 557   capped   556/556
(100 %)
2 diff
(99.7 %id)
DB056124 testis .a 61 to 621 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DB074381 testis .a 61 to 587 2 to 528   capped   527/527
(100 %)
0 diff
(100 %id)
DB074410 testis .a 61 to 583 2 to 525   capped   524/524
(100 %)
1 diff
(99.9 %id)
AL122121 testis .a 67 to 4111 1 to 4045 exact tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 4045/4045
(100 %)
0 diff
(100 %id)
DB039443 testis .a 68 to 313 2 to 247   capped   246/246
(100 %)
1 diff
(99.6 %id)
DB201077 trachea .a 1991 to 2570 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
BP243291 Liver .a 2060 to 2612 1 to 553       553/553
(100 %)
2 diff
(99.7 %id)
BQ267328 insulinoma, Pancreas .a 2183 to 2766 1 to 584       584/584
(100 %)
5 diff
(99.2 %id)
CK825306 insulinoma, Pancreas .a 2183 to 2759 1 to 577       577/577
(100 %)
5 diff
(99.2 %id)
BF084818 denis_drash .a 2200 to 2818 616 to 2       615/617
(99 %)
12 diff
(98.1 %id)
BG986077 denis_drash .a 2200 to 2818 616 to 2       615/617
(99 %)
12 diff
(98.1 %id)
BQ272568 insulinoma, Pancreas .a 2285 to 2898 614 to 1       614/614
(100 %)
0 diff
(100 %id)
Z45791 brain, total brain .a 2388 to 2686 1 to 299       299/299
(100 %)
0 diff
(100 %id)
BU856006 ovary, teratocarcinoma, cell line .a 2396 to 3212 43 to 866       824/961
(85 %)
17 diff
(98.3 %id)
BF084824 denis_drash .a 2405 to 2797 407 to 22       386/407
(94 %)
0 diff
(100 %id)
BG986083 denis_drash .a 2405 to 2797 407 to 22       386/407
(94 %)
0 diff
(100 %id)
BQ229247 embryonal carcinoma, cell line, testis .a 2430 to 3261 1 to 830       830/834
(99 %)
6 diff
(99.3 %id)
AW996750 breast_normal .a 2442 to 2936 16 to 511       496/511
(97 %)
16 diff
(96.9 %id)
BX645123   .a 2464 to 3112 1 to 649       649/649
(100 %)
0 diff
(100 %id)
T67605 Liver .a 2506 to 2839 1 to 341       341/341
(100 %)
11 diff
(96.8 %id)
AW813003 stomach .a 2543 to 2904 11 to 372       362/372
(97 %)
6 diff
(98.4 %id)
AA343651 gall bladder .a 2568 to 2749 1 to 182       182/183
(99 %)
1 diff
(99.5 %id)
AW965064   .a 2569 to 2987 1 to 420       420/420
(100 %)
28 diff
(93.4 %id)
BF915389 uterus_tumor .a 2577 to 3021 451 to 5     Submitted on the opposite strand 447/451
(99 %)
24 diff
(94.7 %id)
U77324   .a 2687 to 2857 1 to 171       171/173
(98 %)
3 diff
(98.3 %id)
EC449362 Prostate .a 2700 to 2810 109 to 1       109/109
(100 %)
2 diff
(98.2 %id)
EC568484 Prostate .a 2730 to 2835 114 to 9       106/114
(92 %)
5 diff
(95.7 %id)
CB146716 Liver .a 2742 to 3326 586 to 1     Submitted on the opposite strand 586/586
(100 %)
4 diff
(99.4 %id)
BE765056 nervous_tumor .a 2783 to 3244 1 to 461       461/461
(100 %)
5 diff
(99.0 %id)
BE886249 leiomyosarcoma, uterus .a 2813 to 3148 345 to 8     Submitted on the opposite strand 338/655
(51 %)
2 diff
(99.7 %id)
H90200 liver and spleen .a 2858 to 3191 1 to 340       340/340
(100 %)
5 diff
(98.6 %id)
BM819197 stomach .a 2893 to 3458 1 to 566       566/566
(100 %)
0 diff
(100 %id)
BM801639 duodenal adenocarcinoma, cell line, small intestine .a 2916 to 3800 1 to 887       887/888
(99 %)
14 diff
(98.5 %id)
AV696823 hepatocellular carcinoma .a 2976 to 3290 1 to 315       315/328
(96 %)
5 diff
(98.5 %id)
BG399481 Kidney .a 2988 to 3652 1 to 664       664/664
(100 %)
1 diff
(99.9 %id)
EY198535 intestinal (Lauren) gastric adenocarcinoma, stomach .a 2992 to 3244 253 to 1     Submitted on the opposite strand 253/254
(99 %)
4 diff
(98.5 %id)
R94391 liver and spleen .a 3001 to 3373 1 to 384       384/450
(85 %)
22 diff
(95.2 %id)
BF801416 colon_ins .a 3045 to 3498 22 to 479       458/488
(93 %)
31 diff
(93.7 %id)
BX472652   .a 3047 to 3476 1 to 435       435/435
(100 %)
8 diff
(98.2 %id)
BF800050 colon_ins .a 3055 to 3346 296 to 5     Submitted on the opposite strand 292/327
(89 %)
5 diff
(98.5 %id)
EB387762 eye, optic nerve .a 3063 to 3824 1 to 762       762/762
(100 %)
5 diff
(99.4 %id)
BG674055 skin .a 3088 to 3733 1 to 661   AAA   661/1106
(59 %)
27 diff
(97.6 %id)
BF084678 colon .a 3112 to 3614 505 to 5       501/505
(99 %)
1 diff
(99.9 %id)
BF084642 colon .a 3116 to 3552 436 to 1       436/436
(100 %)
14 diff
(96.8 %id)
BM798192 Ascites, stomach .a 3141 to 3399 1 to 260       260/260
(100 %)
7 diff
(97.4 %id)
CN358443 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 3171 to 3734 1 to 564       564/564
(100 %)
0 diff
(100 %id)
BY798443 eye .a 3183 to 3706 1 to 524       524/524
(100 %)
0 diff
(100 %id)
T71483 liver and spleen .a 3232 to 3520 1 to 292   fully sequenced,   292/292
(100 %)
4 diff
(98.7 %id)
TI_154061372   .a 3249 to 3901 735 to 83   AAA   653/882
(74 %)
4 diff
(99.6 %id)
BF838184 head_neck .a 3251 to 3738 485 to 1     Submitted on the opposite strand 485/485
(100 %)
9 diff
(98.2 %id)
CA420554 Bone, Enchondroma cell line .a 3267 to 3901 653 to 18   AAA   636/637
(99 %)
3 diff
(99.6 %id)
BM796409 Ascites, stomach .a 3288 to 3738 1 to 451       451/451
(100 %)
6 diff
(98.7 %id)
T86896 liver and spleen .a 3289 to 3537 1 to 258   fully sequenced,   258/258
(100 %)
6 diff
(97.7 %id)
R16438 liver and spleen .a 3289 to 3574 1 to 295   fully sequenced,   295/295
(100 %)
8 diff
(97.3 %id)
BF229401 colon_ins .a 3326 to 3467 171 to 29       143/171
(83 %)
0 diff
(100 %id)
BX115191 liver and spleen .a 3344 to 4031 1 to 688       688/688
(100 %)
0 diff
(100 %id)
CN358444 embryonic stem cells, DMSO-treated H9 cellline .a 3382 to 3729 1 to 348       348/348
(100 %)
5 diff
(98.6 %id)
BF670154 brain, primitive neuroectoderm .a 3395 to 4033 1 to 634       634/888
(71 %)
28 diff
(96.9 %id)
BG402439 Kidney .a 3402 to 4096 1 to 698       698/784
(89 %)
33 diff
(95.8 %id)
CX757318 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 3416 to 3991 581 to 4     Submitted on the opposite strand 578/815
(70 %)
0 diff
(100 %id)
BM795854 Ascites, stomach .a 3432 to 3901 1 to 470   AAA   470/470
(100 %)
2 diff
(99.6 %id)
AA618549 lung, lung tumor .a 3459 to 3872 414 to 1       414/414
(100 %)
0 diff
(100 %id)
BP260431 small intestine .a 3463 to 4043 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
AI744411 ovary, tumor, 5 pooled (see description) .a 3470 to 3901 432 to 1       432/432
(100 %)
0 diff
(100 %id)
T67489 Liver .a 3472 to 3871 417 to 1       417/446
(93 %)
19 diff
(95.8 %id)
T71331 liver and spleen .a 3490 to 3837 349 to 1   fully sequenced,   349/349
(100 %)
0 diff
(100 %id)
BE697880 colon .a 3496 to 4016 527 to 8       520/527
(98 %)
0 diff
(100 %id)
H90858 liver and spleen .a 3505 to 3902 403 to 2       402/407
(98 %)
0 diff
(100 %id)
T86897 liver and spleen .a 3507 to 3890 395 to 1   fully sequenced,   395/395
(100 %)
7 diff
(98.3 %id)
BP420795 small intestine .a 3513 to 4018 1 to 502     Submitted on the opposite strand 502/502
(100 %)
2 diff
(99.7 %id)
R12694 liver and spleen .a 3544 to 3904 365 to 1   fully sequenced,   365/365
(100 %)
1 diff
(99.8 %id)
FN055031 breast carcinoma .a 3604 to 3698 1 to 96       96/96
(100 %)
1 diff
(99.0 %id)
H22869 whole brain .a 3695 to 4033 342 to 1     Submitted on the opposite strand 342/386
(88 %)
3 diff
(99.3 %id)
BE145764 head_neck .a 3758 to 3935 1 to 178       178/178
(100 %)
0 diff
(100 %id)
BF987559 placenta_normal .a 3837 to 4064 225 to 3       223/225
(99 %)
0 diff
(100 %id)
FN147393 breast carcinoma .a 3920 to 4024 106 to 1     Submitted on the opposite strand 106/106
(100 %)
1 diff
(99.1 %id)
DA928395 small intestine .b 1 to 557 4 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
NM_018109.3   .b 1 to 5619 2 to 5620 exact RefSeq,   5620/5620
(100 %)
0 diff
(100 %id)
DA086747 cerebellum .b 1 to 568 2 to 576   tiling clone, capped   575/575
(100 %)
4 diff
(99.4 %id)
DA543536   .b 1 to 561 2 to 566   capped   565/565
(100 %)
3 diff
(99.5 %id)
DA888871   .b 1 to 554 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
CN274509 embryonic stem cells, DMSO-treated H9 cellline .b 11 to 301 1 to 294       294/294
(100 %)
3 diff
(99.0 %id)
AK022188 mammary gland .b 19 to 2590 1 to 2571 W507L V554A available from FLJ,   2571/2571
(100 %)
3 diff
(99.9 %id)
AU121454 mammary gland .b 20 to 759 2 to 739   capped   738/740
(99 %)
4 diff
(99.5 %id)
DA733887   .b 20 to 758 2 to 739   capped   738/771
(95 %)
26 diff
(96.7 %id)
BM834191 stomach .b 30 to 643 1 to 607       607/607
(100 %)
4 diff
(99.4 %id)
DA587131 lung .b 31 to 540 2 to 511   capped   510/510
(100 %)
0 diff
(100 %id)
BG941352 blood .b 34 to 181 1 to 153       153/153
(100 %)
6 diff
(96.1 %id)
BC061703 Pooled, 40 cell lines .b 37 to 2128 31 to 2124 Y221H C419R S546N available from MGC, AAA   2094/2124
(98 %)
11 diff
(99.5 %id)
BU941101 mixed (pool of 40 RNAs) .b 37 to 805 31 to 812       782/822
(95 %)
31 diff
(96.3 %id)
DN990023 brain, whole brain .b 37 to 582 43 to 588       546/588
(92 %)
6 diff
(99.0 %id)
AU253057 neuroblastoma .b 46 to 712 10 to 674       665/700
(95 %)
34 diff
(95.2 %id)
H24263 whole brain .b 47 to 452 1 to 413     Submitted on the opposite strand 413/414
(99 %)
16 diff
(96.2 %id)
AU280377   .b 51 to 609 1 to 559       559/559
(100 %)
6 diff
(99.0 %id)
DA444226 tongue, tumor tissue .b 52 to 566 2 to 517   capped   516/516
(100 %)
3 diff
(99.5 %id)
AI167205 pooled .b 53 to 442 1 to 390     Submitted on the opposite strand 390/390
(100 %)
0 diff
(100 %id)
AI912897 Kidney .b 53 to 469 1 to 417     Submitted on the opposite strand 417/417
(100 %)
2 diff
(99.6 %id)
AI915765 pooled .b 53 to 358 1 to 306     Submitted on the opposite strand 306/306
(100 %)
2 diff
(99.4 %id)
DA683697   .b 54 to 556 2 to 504   capped   503/503
(100 %)
0 diff
(100 %id)
DB198741 trachea .b 54 to 631 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
BJ990419 hepatoblastoma .b 55 to 637 1 to 583   tiling clone,   583/583
(100 %)
0 diff
(100 %id)
DA943095 Spleen .b 55 to 620 2 to 568   capped   567/568
(99 %)
4 diff
(99.3 %id)
DA910082   .b 57 to 625 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
AA400998 ovarian tumor, ovary .b 58 to 570 1 to 513     Submitted on the opposite strand 513/513
(100 %)
0 diff
(100 %id)
AK001348   .b 59 to 2142 1 to 2084 exact tiling clone, available from FLJ,   2084/2084
(100 %)
0 diff
(100 %id)
BG940995 blood .b 59 to 245 30 to 216       187/190
(98 %)
3 diff
(98.5 %id)
DA205708 brain .b 59 to 542 13 to 496   capped   484/484
(100 %)
0 diff
(100 %id)
DA207677 brain .b 59 to 618 9 to 569   capped   561/564
(99 %)
4 diff
(99.3 %id)
BP211791 cerebrum .b 59 to 627 20 to 588       569/569
(100 %)
3 diff
(99.5 %id)
DA446887 tongue, tumor tissue .b 59 to 495 26 to 462   capped   437/437
(100 %)
0 diff
(100 %id)
G36921   .b 59 to 485 1 to 430       430/430
(100 %)
3 diff
(99.4 %id)
DA579572   .b 59 to 595 17 to 553   capped   537/537
(100 %)
1 diff
(99.9 %id)
N68686 liver and spleen .b 59 to 485 1 to 430     Submitted on the opposite strand 430/430
(100 %)
3 diff
(99.4 %id)
AI470196 pooled .b 59 to 470 1 to 412     Submitted on the opposite strand 412/412
(100 %)
1 diff
(99.8 %id)
AI681826 carcinoid, lung .b 59 to 423 1 to 365     Submitted on the opposite strand 365/365
(100 %)
0 diff
(100 %id)
AI635291 adenocarcinoma, Pancreas .b 59 to 470 16 to 427     Submitted on the opposite strand 412/412
(100 %)
0 diff
(100 %id)
AW136951   .b 59 to 380 18 to 339     Submitted on the opposite strand 322/323
(99 %)
3 diff
(99.1 %id)
BQ000745 lung, Metastatic Chondrosarcoma .b 59 to 755 18 to 714     Submitted on the opposite strand 697/697
(100 %)
0 diff
(100 %id)
DA790628 brain .b 59 to 611 16 to 569   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA892433 rectum .b 59 to 604 9 to 554   capped   546/546
(100 %)
0 diff
(100 %id)
DA956059 Spleen .b 59 to 606 8 to 556   capped   549/549
(100 %)
3 diff
(99.5 %id)
DB114889 thymus .b 59 to 612 8 to 561   capped   554/554
(100 %)
0 diff
(100 %id)
DB200465 trachea .b 59 to 630 9 to 581   capped   573/573
(100 %)
2 diff
(99.7 %id)
CA444435 lung, Metastatic Chondrosarcoma .b 59 to 644 18 to 602     Submitted on the opposite strand 585/588
(99 %)
7 diff
(98.9 %id)
DA439192 tongue, tumor tissue .b 60 to 606 2 to 549   capped   548/548
(100 %)
3 diff
(99.5 %id)
DA452311 tongue, tumor tissue .b 60 to 645 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
DA627480 Kidney .b 60 to 603 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DA654886   .b 60 to 631 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA702038   .b 60 to 611 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA719849   .b 60 to 628 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
AU126916   .b 60 to 740 2 to 680   capped   679/679
(100 %)
6 diff
(99.2 %id)
DB246471 uterus, tumor tissue .b 60 to 627 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
AB194709   .b 63 to 1811 1 to 1749 exact     1749/1749
(100 %)
0 diff
(100 %id)
AY364242   .b 63 to 1882 1 to 1820 exact     1820/1820
(100 %)
0 diff
(100 %id)
DA158675 amygdala .b 63 to 608 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA394867 thalamus .b 64 to 642 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
AA100750 colon, tumor .b 74 to 568 1 to 498       498/502
(99 %)
4 diff
(99.3 %id)
BM918974 pooled pancreas and spleen .b 74 to 1029 20 to 989       970/1089
(89 %)
42 diff
(96.2 %id)
BG111385 Bone, osteosarcoma, cell line .b 81 to 560 1 to 506       505/1289
(39 %)
56 diff
(95.7 %id)
BM905354 melanotic melanoma, skin .b 95 to 917 7 to 832       826/1059
(77 %)
14 diff
(98.7 %id)
BF348883 denis_drash .b 114 to 480 1 to 370       370/370
(100 %)
17 diff
(95.5 %id)
BQ314993 denis_drash .b 114 to 480 1 to 370       370/370
(100 %)
17 diff
(95.5 %id)
CV423950 breast .b 154 to 456 317 to 15     Submitted on the opposite strand 303/596
(50 %)
0 diff
(100 %id)
CA487835   .b 1571 to 2435 1 to 865       865/865
(100 %)
5 diff
(99.5 %id)
W03660 liver and spleen .b 1583 to 1977 1 to 397       397/398
(99 %)
10 diff
(97.5 %id)
AU149677   .b 1620 to 2142 520 to 1       520/525
(99 %)
7 diff
(98.7 %id)
BU598525 mixed (pool of 40 RNAs) .b 1865 to 2587 1 to 724       724/837
(86 %)
24 diff
(97.2 %id)
BU619051 Cell Line, Chondrosarcoma .b 1881 to 2590 728 to 19   AAA   710/710
(100 %)
0 diff
(100 %id)
BG104536 adrenal cortex carcinoma, cell line, adrenal gland .b 1894 to 2592 1 to 691       691/726
(95 %)
11 diff
(98.5 %id)
AI761702 pooled .b 1958 to 2594 638 to 2   tiling clone,   637/638
(99 %)
0 diff
(100 %id)
DB365882   .b 2034 to 2590 560 to 1       560/565
(99 %)
20 diff
(96.5 %id)
N80135 liver and spleen .b 2035 to 2445 416 to 1       416/416
(100 %)
5 diff
(98.8 %id)
BF216353 brain, glioblastoma .b 2035 to 2552 23 to 545       523/852
(61 %)
21 diff
(97.6 %id)
BJ990420 hepatoblastoma .b 2045 to 2584 540 to 1       540/540
(100 %)
0 diff
(100 %id)
BX645287   .b 2057 to 2594 555 to 17     Submitted on the opposite strand 539/555
(97 %)
0 diff
(100 %id)
AU147261 mammary gland .b 2095 to 2590 499 to 1       499/553
(90 %)
16 diff
(97.2 %id)
AI590846 normal gingiva (cell line from immortalizedkeratinocytes) .b 2124 to 2590 467 to 1       467/467
(100 %)
1 diff
(99.8 %id)
AA884787 pooled .b 2134 to 2593 460 to 1       460/460
(100 %)
0 diff
(100 %id)
AW008991 colon .b 2170 to 2590 431 to 11   AAA   421/421
(100 %)
0 diff
(100 %id)
AI439439 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 2172 to 2594 425 to 3       423/425
(99 %)
0 diff
(100 %id)
AW473989 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 2172 to 2591 420 to 1       420/420
(100 %)
0 diff
(100 %id)
N48962 multiple sclerosis lesions .b 2173 to 2590 419 to 1       419/419
(100 %)
1 diff
(99.8 %id)
AW243841 serous papillary carcinoma, high grade, 2pooled tumors, uterus .b 2176 to 2591 416 to 1       416/416
(100 %)
0 diff
(100 %id)
BE768980 prostate_tumor .b 2179 to 2481 307 to 6       302/307
(98 %)
0 diff
(100 %id)
DB533654 hippocampus .b 2188 to 2589 1 to 401     Submitted on the opposite strand 401/402
(99 %)
6 diff
(98.6 %id)
AA100732 colon, tumor .b 2207 to 2594 404 to 5       400/409
(97 %)
0 diff
(100 %id)
BU587919 mixed (pool of 40 RNAs) .b 2219 to 2592 1 to 374   AAA   374/374
(100 %)
4 diff
(99.0 %id)
DA796367 brain .b 2222 to 2703 2 to 484   capped   483/483
(100 %)
1 diff
(99.8 %id)
DA451789 tongue, tumor tissue .b 2231 to 2798 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
R05306 liver and spleen .b 2269 to 2597 339 to 1       339/400
(84 %)
14 diff
(96.5 %id)
AA911988 Dorsal root ganglion, peripheral nervous system .b 2270 to 2590 332 to 12   AAA   321/321
(100 %)
4 diff
(98.8 %id)
BG940996 blood .b 2277 to 2594 344 to 27       318/344
(92 %)
0 diff
(100 %id)
BX500328 Liver .b 2410 to 3010 1 to 594   tiling clone,   594/594
(100 %)
6 diff
(99.0 %id)
CA453834 mixed (pool of 40 RNAs) .b 2417 to 2593 1 to 177   AAA   177/177
(100 %)
4 diff
(97.8 %id)
DA795089 brain .b 2602 to 3180 2 to 579   tiling clone, capped   578/578
(100 %)
3 diff
(99.5 %id)
AK125211 brain .b 3010 to 5615 1 to 2604   tiling clone, available from FLJ,   2604/2604
(100 %)
5 diff
(99.9 %id)
DA531505 brain .b 3011 to 3589 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA710755   .b 3477 to 4043 2 to 569   capped   568/568
(100 %)
6 diff
(99.0 %id)
BQ015051 Chondrosarcoma, Left Pubic Bone .b 3668 to 4235 582 to 15   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 568/568
(100 %)
3 diff
(99.5 %id)
CB996681 placenta, pre-eclamptic placenta .b 3668 to 4337 27 to 700   tiling clone,   674/788
(85 %)
15 diff
(98.1 %id)
H58977 liver and spleen .b 3767 to 4165 1 to 409       409/466
(87 %)
17 diff
(96.4 %id)
H93718.
matches multiple genes
liver and spleen .b 3797 to 4184 1 to 396     also hits gene MRPL36 396/396
(100 %)
22 diff
(94.5 %id)
BX956680   .b 3956 to 4401 1 to 446       446/446
(100 %)
1 diff
(99.8 %id)
DA014747 adrenal gland .b 3975 to 4551 2 to 578   tiling clone, capped   577/578
(99 %)
1 diff
(99.9 %id)
CD172058 White Matter .b 4315 to 5008 1 to 697   tiling clone,   697/723
(96 %)
7 diff
(99.1 %id)
H58930 liver and spleen .b 4844 to 5218 387 to 1       387/392
(98 %)
13 diff
(96.7 %id)
H95570 liver and spleen .b 4904 to 5218 316 to 1       316/317
(99 %)
1 diff
(99.7 %id)
AL046193 testis .b 4931 to 5191 1 to 261       261/261
(100 %)
0 diff
(100 %id)
BQ775851 Bone, Human Chondrosarcoma Cell Line .b 4937 to 5618 693 to 12   AAA   682/682
(100 %)
1 diff
(99.9 %id)
CN411934 embryonic stem cells, cell lines H1, H7, andH9 .b 5015 to 5343 337 to 664       328/664
(49 %)
6 diff
(99.1 %id)
DB295378 adrenal gland .b 5099 to 5615 518 to 1       518/518
(100 %)
1 diff
(99.9 %id)
BE670315 carcinoid, lung .b 5104 to 5619 524 to 9   tiling clone,   516/540
(95 %)
0 diff
(100 %id)
DB317711 brain .b 5174 to 5615 442 to 1       442/449
(98 %)
2 diff
(99.6 %id)
AA564703 adrenal adenoma, adrenal gland .b 5249 to 5615 397 to 31   AAA   367/367
(100 %)
1 diff
(99.8 %id)
AI351017   .b 5317 to 5619 308 to 6       303/308
(98 %)
0 diff
(100 %id)
BI553641 brain, hippocampus .c 1 to 812 3 to 817 S167L S168L V169S N170Q T171H ... tiling clone,   817/821
(99 %)
18 diff
(97.9 %id)
DA139948 alzheimer cortex .c 1 to 554 2 to 555   tiling clone, capped   554/554
(100 %)
1 diff
(99.9 %id)
TI_44167986   .c 3 to 812 155 to 967 S167L S168L V169S N170Q T171H ...     813/971
(83 %)
20 diff
(98.0 %id)
CX784103 human embryonic stem cells .d 1 to 651 1 to 651 exact tiling clone,   651/651
(100 %)
0 diff
(100 %id)
CD687844 normal nasopharynx .e 1 to 630 36 to 665 C181G tiling clone,   634/665
(95 %)
8 diff
(98.8 %id)
DA030270   .e 1 to 575 2 to 576   tiling clone, capped   575/575
(100 %)
1 diff
(99.9 %id)
DA466035   .e 22 to 588 2 to 568   tiling clone, capped   567/567
(100 %)
0 diff
(100 %id)
CB250679 Human Lung Epithelial cells, lung .f 1 to 662 687 to 14 F3G L9F A10S M11N A12C ... AAA   669/673
(99 %)
12 diff
(98.3 %id)
TI_159723340   .f 1 to 659 747 to 81 F3G F8X AAA   663/993
(66 %)
8 diff
(99.2 %id)
CA429521 Cell Line, Chondrosarcoma .f 3 to 659 671 to 14 V2F L9F A10S M11N A12G ... tiling clone, AAA   658/704
(93 %)
6 diff
(99.2 %id)
CF127335 Chondrosarcoma Lung Metastasis cell lines, lung .f 11 to 654 38 to 681       644/681
(94 %)
6 diff
(99.2 %id)
TI_154190891   .f 11 to 660 87 to 736   tiling clone, AAA   650/736
(88 %)
6 diff
(99.2 %id)
CA945008 Human Lung Epithelial cells, lung .f 12 to 659 661 to 14   AAA   648/652
(99 %)
0 diff
(100 %id)
AK225159 brain .f 29 to 1160 21 to 1152   tiling clone, AAA   1132/1969
(57 %)
8 diff
(99.6 %id)
CB163380 Liver .f 70 to 665 609 to 14     Submitted on the opposite strand 596/609
(97 %)
0 diff
(100 %id)
BG030170 breast, mammary adenocarcinoma, cell line .f 147 to 622 478 to 3     Submitted on the opposite strand 476/478
(99 %)
0 diff
(100 %id)
CA429377 Cell Line, Chondrosarcoma .f 169 to 659 504 to 14   AAA   491/491
(100 %)
6 diff
(98.8 %id)
TI_149280069   .f 200 to 659 544 to 85   AAA   460/699
(65 %)
4 diff
(99.5 %id)
BU679017 lung, Primary Lung Epithelial Cells .f 200 to 659 473 to 14   AAA   460/461
(99 %)
4 diff
(99.2 %id)
AI346960 adenocarcinoma, colon .f 224 to 659 442 to 7       436/442
(98 %)
0 diff
(100 %id)
AI278703 adenocarcinoma, colon .f 263 to 659 397 to 1       397/397
(100 %)
3 diff
(99.3 %id)
CA427442 Cell Line, Chondrosarcoma .f 271 to 1014 757 to 17   AAA   741/741
(100 %)
8 diff
(99.0 %id)
AA947213 adenocarcinoma, colon .f 286 to 659 374 to 1       374/374
(100 %)
2 diff
(99.5 %id)
AA401050 ovarian tumor, ovary .f 305 to 841 538 to 1     Submitted on the opposite strand 538/538
(100 %)
2 diff
(99.7 %id)
AI264520 adenocarcinoma, colon .f 364 to 659 296 to 1       296/300
(98 %)
2 diff
(99.4 %id)
AI650929 Kidney .f 586 to 1009 432 to 9   tiling clone,   424/432
(98 %)
0 diff
(100 %id)
CV311412 head_neck .f 594 to 944 1 to 348       348/348
(100 %)
20 diff
(94.3 %id)
BF757608 colon .f 918 to 1285 369 to 1   tiling clone, Submitted on the opposite strand 369/369
(100 %)
3 diff
(99.2 %id)
GD142528   .f 1160 to 1259 1 to 100   tiling clone,   100/104
(96 %)
6 diff
(94.3 %id)
DB027067 testis .g 1 to 562 2 to 564 V30C L31F I32N H33T C34L ... tiling clone, capped   563/563
(100 %)
1 diff
(99.9 %id)
CU452402 epidermis .h 1 to 598 621 to 24 G2S F59S tiling clone, Submitted on the opposite strand 598/626
(95 %)
5 diff
(99.3 %id)
DA078979 cerebellum .i 1 to 575 2 to 576 exact tiling clone, capped   575/575
(100 %)
0 diff
(100 %id)
BU567894 testis .j 1 to 686 2 to 689 L2S tiling clone,   689/804
(85 %)
22 diff
(97.3 %id)
DB020359 testis .j 4 to 573 2 to 571 R27Q capped   570/570
(100 %)
3 diff
(99.5 %id)
DB039887 testis .j 4 to 568 2 to 566 R27Q capped   565/565
(100 %)
1 diff
(99.9 %id)
DB045380 testis .j 4 to 433 2 to 431 L2S capped   430/441
(97 %)
3 diff
(99.4 %id)
DB052572 testis .j 4 to 575 2 to 573 L2S tiling clone, capped   572/572
(100 %)
2 diff
(99.7 %id)
DB054516 testis .j 4 to 571 2 to 569 L2S capped   568/568
(100 %)
2 diff
(99.7 %id)
DB057850 testis .j 4 to 239 2 to 237   tiling clone, capped   236/236
(100 %)
0 diff
(100 %id)
DB059690 testis .j 4 to 545 2 to 543 R27Q capped   542/542
(100 %)
2 diff
(99.7 %id)
AK125739 testis .k 1 to 2867 2 to 2868 exact tiling clone, available from FLJ,   2868/2868
(100 %)
6 diff
(99.8 %id)
DB046416 testis .k 1 to 571 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
DB338227 testis .k 2333 to 2867 535 to 1       535/535
(100 %)
4 diff
(99.3 %id)
AK097852 testis .l 1 to 2287 1 to 1567 E83K tiling clone, available from FLJ, Suspected internal deletion 1567/1567
(100 %)
10 diff
(99.4 %id)
NR_003524.1   .l 1 to 2287 1 to 1567 exact RefSeq, tiling clone, Suspected internal deletion 1567/1567
(100 %)
0 diff
(100 %id)
DB056243 testis .l 2 to 340 2 to 341   capped   340/341
(99 %)
9 diff
(97.4 %id)
DB338937 testis .l 1760 to 2287 528 to 1   tiling clone,   528/528
(100 %)
3 diff
(99.5 %id)
AA609140   .l 1811 to 2225 414 to 1   tiling clone,   414/414
(100 %)
6 diff
(98.6 %id)
DB514058 testis .l 2031 to 2231 1 to 202   tiling clone, Submitted on the opposite strand 202/202
(100 %)
6 diff
(97.1 %id)
DA750085   .m 1 to 530 2 to 532 G48X T49D R50A P51T E52R ... tiling clone, capped   531/531
(100 %)
1 diff
(99.9 %id)
DA632917 Kidney .m 128 to 696 2 to 570   tiling clone, capped   569/569
(100 %)
1 diff
(99.9 %id)
DB035751 testis .n 1 to 574 2 to 582 L2S L24X V25G S26V N27Q ... tiling clone, capped   581/581
(100 %)
9 diff
(98.5 %id)
DB043617 testis .n 4 to 565 2 to 570 L2S V25G S26V N27Q L28P ... capped   569/569
(100 %)
7 diff
(98.8 %id)
DB061751 testis .o-u 1 to 565 9 to 573 P35S tiling clone, capped   572/572
(100 %)
5 diff
(99.2 %id)
DB054093 testis .p 1 to 563 2 to 564 exact tiling clone, capped   563/563
(100 %)
1 diff
(99.9 %id)
DB052110 testis .q 1 to 559 2 to 560 exact tiling clone, capped   559/559
(100 %)
1 diff
(99.9 %id)
DB022604 testis .r 1 to 555 2 to 556 R47Q tiling clone, capped   555/555
(100 %)
1 diff
(99.9 %id)
DB021833 testis .r 2 to 544 2 to 545 R47Q capped   544/544
(100 %)
2 diff
(99.7 %id)
DB024109 testis .s 1 to 545 2 to 546 G54S capped   545/545
(100 %)
1 diff
(99.9 %id)
DB054680 testis .s 1 to 554 2 to 555 G54S tiling clone, capped   554/554
(100 %)
1 diff
(99.9 %id)
DB057996 testis .s 1 to 533 2 to 534 exact tiling clone, capped   533/533
(100 %)
0 diff
(100 %id)
DB047883 testis .t 1 to 546 2 to 548 L24X V25G S26V N27Q L28P ... tiling clone, capped   547/547
(100 %)
2 diff
(99.7 %id)
DB059819 testis .u 1 to 509 3 to 512 L2S R19L E20G A21S R22Q ... tiling clone, capped   511/511
(100 %)
9 diff
(98.3 %id)
DB056698 testis .va 1 to 499 2 to 500 exact tiling clone, capped   499/499
(100 %)
1 diff
(99.8 %id)
DW445112 Liver .vc-u 1 to 200 223 to 10 P33T tiling clone,   207/223
(92 %)
0 diff
(100 %id)
AV696891 hepatocellular carcinoma Gene MTPAP, variant not shown         Suspected internal deletion, this clone was ignored    
AV652343 corresponding non cancerous liver tissue Gene MTPAP, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
BF914494 uterus_tumor Gene MTPAP, variant not shown              
AK309583 Kidney Gene MTPAP, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
BF084790 denis_drash Gene MTPAP, variant not shown         This clone was ignored    
BF084792 denis_drash Gene MTPAP, variant not shown         This clone was ignored    
BF592323 breast, lobullar carcinoma in situ Gene MTPAP, variant not shown         Submitted on the opposite strand    
BG703508 brain, hippocampus Gene MTPAP, variant not shown         This clone was ignored    
BU180678 eye, retinoblastoma Gene MTPAP, variant not shown         Submitted on the opposite strand    
BU571036 brain, glioblastoma Gene MTPAP, variant not shown         This clone was ignored    
DB035098 testis Gene MTPAP, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB057904 testis Gene MTPAP, variant not shown       capped This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o-u, .p, .q, .r, .s, .t, .u, .va, .vb-u, .vc-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC