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Gene RPRD1ATABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
504 representative clones for gene RPRD1A back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CR590094 fetal liver .a 1 to 1850 1 to 1850 exact tiling clone,   1850/1850
(100 %)
0 diff
(100 %id)
BX423840 fetal liver, Liver .a 1 to 941 1 to 942       942/942
(100 %)
6 diff
(99.4 %id)
BX449138 fetal liver, Liver .a 1 to 831 1 to 830       830/830
(100 %)
15 diff
(98.2 %id)
AK314569 placenta .a 2 to 1091 1 to 1090 exact     1090/1090
(100 %)
2 diff
(99.9 %id)
DA197602 brain .a 2 to 503 2 to 503   capped   502/502
(100 %)
1 diff
(99.9 %id)
DB471747 hippocampus .a 5 to 500 1 to 496       496/496
(100 %)
1 diff
(99.8 %id)
BE799508 lung, small cell carcinoma .a 6 to 771 43 to 804       762/806
(94 %)
16 diff
(98.1 %id)
DA118013 cerebellum .a 7 to 561 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA280559 corpus callosum .a 7 to 558 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA313197 hippocampus .a 7 to 548 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
DA458026 tongue, tumor tissue .a 7 to 518 2 to 513   capped   512/512
(100 %)
2 diff
(99.7 %id)
DB479202 hippocampus .a 7 to 518 1 to 512       512/514
(99 %)
4 diff
(99.3 %id)
DA872890 Prostate .a 7 to 584 2 to 580   capped   579/579
(100 %)
4 diff
(99.4 %id)
DB065818 testis .a 7 to 518 2 to 514   capped   513/513
(100 %)
3 diff
(99.5 %id)
DB122305 thymus .a 7 to 569 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA223304 brain .a 8 to 531 2 to 525   capped   524/524
(100 %)
1 diff
(99.9 %id)
DA312620 hippocampus .a 8 to 503 2 to 497   capped   496/496
(100 %)
1 diff
(99.8 %id)
DA395205 thalamus .a 10 to 594 2 to 587   capped   586/586
(100 %)
2 diff
(99.7 %id)
CN338036 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 13 to 398 1 to 386       386/386
(100 %)
1 diff
(99.8 %id)
BG177120 lymph, lymphoma, cell line .a 13 to 626 12 to 645       579/645
(89 %)
35 diff
(94.6 %id)
BI546400 brain, hippocampus .a 15 to 703 1 to 701       701/703
(99 %)
31 diff
(95.6 %id)
BI822367 pooled brain, lung, testis .a 16 to 757 1 to 741       741/741
(100 %)
3 diff
(99.6 %id)
TI_57200288   .a 16 to 757 61 to 801       741/801
(92 %)
7 diff
(99.2 %id)
DA497472 brain .a 17 to 580 2 to 565   capped   564/564
(100 %)
3 diff
(99.5 %id)
CN483836 eye .a 19 to 643 1 to 625       625/625
(100 %)
1 diff
(99.9 %id)
TI_44166586   .a 20 to 703 91 to 786       696/788
(88 %)
25 diff
(96.9 %id)
DA292372 hippocampus .a 21 to 606 2 to 588   capped   587/587
(100 %)
2 diff
(99.7 %id)
DA321437 hippocampus .a 21 to 568 2 to 549   capped   546/548
(99 %)
5 diff
(99.1 %id)
DA546996   .a 21 to 565 2 to 547   capped   546/546
(100 %)
2 diff
(99.7 %id)
DA807906 brain .a 21 to 580 2 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
BG325568 Kidney, renal cell adenocarcinoma .a 23 to 259 1 to 237       237/237
(100 %)
0 diff
(100 %id)
BU541361 carcinoma, cell line, Prostate .a 23 to 676 1 to 660       660/873
(75 %)
10 diff
(98.9 %id)
DA176407 amygdala .a 24 to 518 2 to 496   capped   495/495
(100 %)
1 diff
(99.8 %id)
DA774192 brain .a 24 to 607 2 to 586   capped   585/585
(100 %)
2 diff
(99.7 %id)
BP348441 brain .a 24 to 601 1 to 579       579/582
(99 %)
3 diff
(99.5 %id)
DA211979 brain .a 25 to 518 2 to 495   capped   494/494
(100 %)
2 diff
(99.6 %id)
DA287380 corpus callosum .a 25 to 603 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
DB041094 testis .a 25 to 573 2 to 553   capped   552/552
(100 %)
4 diff
(99.3 %id)
DB137068 thymus .a 25 to 377 2 to 355   capped   354/354
(100 %)
2 diff
(99.5 %id)
DB288274 uterus .a 25 to 518 2 to 496   capped   495/495
(100 %)
2 diff
(99.6 %id)
DA238748 brain .a 26 to 614 2 to 588   capped   587/587
(100 %)
4 diff
(99.4 %id)
DA310454 hippocampus .a 28 to 596 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA355329 subthalamic nucleus .a 28 to 558 2 to 533   capped   532/532
(100 %)
8 diff
(98.5 %id)
DA781991 brain .a 28 to 591 2 to 566   capped   565/565
(100 %)
3 diff
(99.5 %id)
DA409297 thalamus .a 34 to 586 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
AL532768 adult brain, brain .a 40 to 941 1 to 903       903/903
(100 %)
3 diff
(99.7 %id)
BI488504 brain .a 42 to 830 1 to 795       793/797
(99 %)
15 diff
(98.2 %id)
TI_45379002   .a 42 to 830 74 to 868       793/870
(91 %)
25 diff
(97.2 %id)
DA875141 Prostate .a 46 to 611 2 to 569   capped   568/568
(100 %)
8 diff
(98.6 %id)
DB469628 hippocampus .a 56 to 498 1 to 442       442/442
(100 %)
2 diff
(99.6 %id)
DB203505 trachea .a 57 to 606 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
CN338038 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 63 to 789 12 to 738       727/738
(98 %)
6 diff
(99.2 %id)
DA797968 brain .a 68 to 601 2 to 535   capped   534/534
(100 %)
1 diff
(99.9 %id)
BM456044 lymph, lymphoma, cell line .a 72 to 939 1 to 869       869/1133
(76 %)
15 diff
(98.7 %id)
CD109808 Human Placenta, placenta .a 72 to 552 27 to 508       482/739
(65 %)
13 diff
(98.3 %id)
CF995002 Human Placenta, placenta .a 72 to 843 27 to 807       781/820
(95 %)
22 diff
(97.4 %id)
DN993197 brain, whole brain .a 93 to 627 1 to 535       535/535
(100 %)
1 diff
(99.9 %id)
CN338039 embryonic stem cells, DMSO-treated H9 cellline .a 104 to 761 1 to 658       658/658
(100 %)
1 diff
(99.9 %id)
CN338037 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 106 to 797 1 to 691       691/691
(100 %)
3 diff
(99.6 %id)
DB226582 trachea .a 126 to 706 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DA444076 tongue, tumor tissue .a 129 to 715 2 to 591   capped   590/590
(100 %)
5 diff
(99.2 %id)
DB168495 kidney, tumor tissue .a 143 to 715 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
TI_57170557   .a 162 to 936 57 to 830       774/830
(93 %)
12 diff
(98.6 %id)
DA328376 hippocampus .a 169 to 723 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
BI825333 brain, medulla .a 172 to 936 1 to 764       764/764
(100 %)
6 diff
(99.3 %id)
DA222859 brain .a 199 to 727 2 to 530   capped   529/529
(100 %)
1 diff
(99.9 %id)
BE254653 eye, retinoblastoma .a 220 to 890 1 to 695       693/717
(96 %)
48 diff
(93.4 %id)
CA396838 eye, RPE/choroid .a 230 to 837 1 to 608       608/608
(100 %)
1 diff
(99.9 %id)
DB444937 testis .b 1 to 435 1 to 435   tiling clone,   435/435
(100 %)
2 diff
(99.6 %id)
BP217413 caudate nucleus .b 19 to 602 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
DA147788 amygdala .b 20 to 596 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
DA292956 hippocampus .b 30 to 596 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
DA311542 hippocampus .b 30 to 597 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
DA546026   .b 32 to 601 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
TI_44171970   .b 32 to 714 119 to 801       683/801
(85 %)
7 diff
(99.2 %id)
DA517999 brain .b 34 to 588 2 to 556   capped   555/555
(100 %)
3 diff
(99.5 %id)
AK001518   .b 36 to 2432 1 to 2397 E193D I234V available from FLJ,   2397/2397
(100 %)
5 diff
(99.8 %id)
BI550899 brain, hippocampus .b 36 to 714 1 to 679       679/679
(100 %)
5 diff
(99.3 %id)
BP348876 brain .b 36 to 617 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BP361084 thalamus .b 36 to 617 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DA012039 adrenal gland .b 37 to 586 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA030398   .b 37 to 605 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA041874 bladder .b 37 to 613 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA097278 cerebellum .b 37 to 591 2 to 557   capped   556/556
(100 %)
2 diff
(99.7 %id)
DA158350 amygdala .b 37 to 598 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
DA194510 amygdala .b 37 to 632 2 to 597   capped   596/596
(100 %)
1 diff
(99.9 %id)
DA197424 brain .b 37 to 586 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA197472 brain .b 37 to 596 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA226969 brain .b 37 to 595 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA235619 brain .b 37 to 630 2 to 596   capped   595/595
(100 %)
2 diff
(99.7 %id)
DA262581 caudate nucleus .b 37 to 624 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DA329323 hippocampus .b 37 to 605 2 to 570   capped   569/572
(99 %)
3 diff
(99.5 %id)
DA332737 hippocampus .b 37 to 590 2 to 557   capped   556/556
(100 %)
4 diff
(99.3 %id)
DA336047 hippocampus .b 37 to 630 2 to 595   capped   594/594
(100 %)
1 diff
(99.9 %id)
DA339441 hippocampus .b 37 to 607 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA345869 substantia nigra .b 37 to 619 2 to 584   capped   583/584
(99 %)
4 diff
(99.4 %id)
DA457782 tongue, tumor tissue .b 37 to 588 2 to 554   capped   553/553
(100 %)
2 diff
(99.7 %id)
DA498868 brain .b 37 to 596 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA513616 brain .b 37 to 604 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
BF205502 muscle, rhabdomyosarcoma .b 37 to 791 1 to 753       753/818
(92 %)
26 diff
(96.9 %id)
DA780054 brain .b 37 to 618 2 to 584   capped   583/583
(100 %)
2 diff
(99.7 %id)
DA965877 stomach .b 37 to 603 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DB066638 testis .b 37 to 572 2 to 538   capped   537/537
(100 %)
2 diff
(99.7 %id)
DB163507 thymus .b 37 to 593 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DB173581 kidney, tumor tissue .b 37 to 623 2 to 589   capped   588/588
(100 %)
3 diff
(99.5 %id)
DB229310 trachea .b 37 to 581 2 to 546   capped   545/545
(100 %)
2 diff
(99.7 %id)
DB229336 trachea .b 37 to 589 2 to 554   capped   553/553
(100 %)
2 diff
(99.7 %id)
DB260458 uterus .b 37 to 607 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
DB263698 uterus .b 37 to 605 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DB276640 uterus .b 37 to 582 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
AW409855.
matches multiple genes
muscle, rhabdomyosarcoma .b 38 to 641 20 to 623     also hits gene ASS1 604/623
(96 %)
6 diff
(99.1 %id)
DA784472 brain .b 38 to 578 2 to 542   capped   541/541
(100 %)
4 diff
(99.3 %id)
DA246284 brain .b 39 to 626 2 to 590   capped   589/589
(100 %)
2 diff
(99.7 %id)
BP236759 coronary artery .b 39 to 623 1 to 585       585/587
(99 %)
4 diff
(99.4 %id)
DB124283 thymus .b 39 to 595 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA239298 brain .b 40 to 615 2 to 577   capped   576/576
(100 %)
4 diff
(99.4 %id)
DA403890 thalamus .b 40 to 592 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
DA100446 cerebellum .b 41 to 586 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DA862732 placenta .b 41 to 601 2 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
DA009449 adrenal gland .b 42 to 603 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
DA225204 brain .b 42 to 597 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA304730 hippocampus .b 42 to 627 2 to 587   capped   586/586
(100 %)
2 diff
(99.7 %id)
DA151633 amygdala .b 43 to 623 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DA227207 brain .b 43 to 608 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DA556550   .b 44 to 612 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
DA789115 brain .b 44 to 610 2 to 568   capped   567/569
(99 %)
3 diff
(99.5 %id)
DA965179 stomach .b 44 to 616 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
AL582913 B cells from Burkitt lymphoma .b 69 to 1032 31 to 992       962/992
(96 %)
11 diff
(98.9 %id)
CR590908 adult brain .b 78 to 1762 1 to 1685 exact tiling clone,   1685/1685
(100 %)
0 diff
(100 %id)
AF419845   .b 184 to 4449 1 to 4266 exact tiling clone, AAA   4266/4266
(100 %)
2 diff
(100.0 %id)
NM_018170.3   .b 185 to 4449 1 to 4265 exact RefSeq, AAA   4265/4265
(100 %)
1 diff
(100.0 %id)
BG503686 embryonal carcinoma, testis .b 696 to 1487 1 to 815       815/828
(98 %)
34 diff
(95.9 %id)
CN338042 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 716 to 1191 1 to 476       476/476
(100 %)
0 diff
(100 %id)
BQ921078 leiomyosarcoma, uterus .b 716 to 1623 1 to 910       910/910
(100 %)
8 diff
(99.2 %id)
Z44644 brain, total brain .b 764 to 1121 1 to 359       359/359
(100 %)
4 diff
(98.9 %id)
DA213463 brain .b 775 to 1323 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA235752 brain .b 795 to 1374 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA221969 brain .b 796 to 1336 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
CV569304 cornea, eye .b 816 to 1339 1 to 524       524/524
(100 %)
0 diff
(100 %id)
F12853 brain, total brain .b 817 to 1161 1 to 344       344/344
(100 %)
1 diff
(99.8 %id)
F11829 brain, total brain .b 829 to 1190 1 to 361       361/361
(100 %)
1 diff
(99.8 %id)
BM749963 stomach .b 831 to 1400 1 to 569       569/569
(100 %)
3 diff
(99.5 %id)
DA240746 brain .b 865 to 1434 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
BG615820 embryonal carcinoma, testis .b 873 to 1633 1 to 758       758/804
(94 %)
26 diff
(96.8 %id)
BQ962857 leiomyosarcoma, uterus .b 974 to 1736 34 to 801       768/931
(82 %)
16 diff
(98.3 %id)
BM463604 leiomyosarcoma, uterus .b 980 to 1986 44 to 1073       1030/1073
(95 %)
6 diff
(99.5 %id)
DA723115   .b 1010 to 1586 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
BP230970 brain .b 1053 to 1635 1 to 583       583/583
(100 %)
5 diff
(99.2 %id)
CB044921 colon, juvenile granulosa tumor .b 1124 to 1759 11 to 646       636/646
(98 %)
6 diff
(99.1 %id)
BX643302   .b 1131 to 1862 1 to 728       728/728
(100 %)
4 diff
(99.5 %id)
DB160539 thymus .b 1215 to 1820 2 to 607   capped   606/606
(100 %)
1 diff
(99.9 %id)
DA311040 hippocampus .b 1242 to 1810 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA865148 placenta .b 1264 to 1833 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
AL532728 adult brain, brain .b 1277 to 2364 1118 to 37   AAA   1082/1128
(95 %)
0 diff
(100 %id)
BU195774 leiomyosarcoma, uterus .b 1290 to 2115 12 to 838       827/840
(98 %)
4 diff
(99.6 %id)
DA989269 synovial membrane tissue from rheumatioidarthritis .b 1339 to 1920 2 to 584   capped   583/583
(100 %)
2 diff
(99.7 %id)
AL709369 human skeletal muscle .b 1379 to 2044 1 to 666       666/666
(100 %)
0 diff
(100 %id)
AL582864 B cells from Burkitt lymphoma .b 1395 to 2396 994 to 1       994/1007
(98 %)
13 diff
(98.8 %id)
CF456647 peripheral nervous system .b 1445 to 2207 24 to 785       762/786
(96 %)
3 diff
(99.7 %id)
DA045845 bladder .b 1469 to 2018 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
AW994895 breast_normal .b 1474 to 2011 1 to 537       537/537
(100 %)
5 diff
(99.1 %id)
DB013692 esophageal, tumor tissue .b 1495 to 2052 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA441878 tongue, tumor tissue .b 1499 to 2066 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
DA152081 amygdala .b 1500 to 2066 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA393258 thalamus .b 1543 to 2077 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
DA300400 hippocampus .b 1550 to 2135 2 to 587   capped   586/586
(100 %)
2 diff
(99.7 %id)
AW995053 breast_normal .b 1567 to 2114 550 to 3     Submitted on the opposite strand 548/550
(99 %)
0 diff
(100 %id)
DA710944   .b 1601 to 2140 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
AI299011 carcinoid, lung .b 1605 to 2075 1 to 471     Submitted on the opposite strand 471/471
(100 %)
0 diff
(100 %id)
BQ019238 lung, Metastatic Chondrosarcoma .b 1675 to 2432 776 to 19   AAA   758/758
(100 %)
0 diff
(100 %id)
AU126864   .b 1681 to 2384 2 to 713   capped   712/720
(98 %)
16 diff
(97.8 %id)
BE618370 eye, retinoblastoma .b 1698 to 2467 1 to 773       773/886
(87 %)
22 diff
(97.6 %id)
BU620285 Cell Line, Chondrosarcoma .b 1701 to 2427 743 to 17   AAA   727/727
(100 %)
1 diff
(99.9 %id)
BG505172 embryonal carcinoma, testis .b 1710 to 2463 1 to 756       756/757
(99 %)
10 diff
(98.7 %id)
DA396416 thalamus .b 1733 to 2314 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
DA501605 brain .b 1757 to 2328 2 to 576   capped   575/575
(100 %)
3 diff
(99.5 %id)
DA392718 thalamus .b 1787 to 2374 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA392188 thalamus .b 1824 to 2422 2 to 601   capped   600/600
(100 %)
1 diff
(99.9 %id)
AA453209   .b 1824 to 2269 1 to 446       446/446
(100 %)
0 diff
(100 %id)
CD644389 Embryonic Stem cells .b 1847 to 2615 14 to 780       767/781
(98 %)
4 diff
(99.5 %id)
BF434774 Kidney .b 1885 to 2424 541 to 2       540/541
(99 %)
0 diff
(100 %id)
AA617863 lung, lung tumor .b 1895 to 2387 493 to 1       493/493
(100 %)
0 diff
(100 %id)
BE504301 carcinoid, lung .b 1900 to 2427 540 to 13   AAA   528/528
(100 %)
1 diff
(99.9 %id)
DA291125 hippocampus .b 1912 to 2494 2 to 586   capped   585/585
(100 %)
2 diff
(99.7 %id)
DB551377 hippocampus .b 1931 to 2424 1 to 494     Submitted on the opposite strand 494/494
(100 %)
0 diff
(100 %id)
DB527307 testis .b 1955 to 2432 1 to 478     Submitted on the opposite strand 478/478
(100 %)
0 diff
(100 %id)
BQ719877 sympathetic trunk .b 1960 to 2788 1 to 836       836/878
(95 %)
9 diff
(99.0 %id)
CA450120 Human Lung Epithelial cells, lung .b 1971 to 2427 473 to 17   AAA   457/457
(100 %)
0 diff
(100 %id)
CA313690 Human Lung Epithelial cells, lung .b 1971 to 2427 473 to 17   AAA   457/457
(100 %)
0 diff
(100 %id)
DB565176 hypothalamus .b 1978 to 2427 1 to 450     Submitted on the opposite strand 450/450
(100 %)
0 diff
(100 %id)
DA517890 brain .b 1998 to 2548 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
AI828693 ovary, tumor, 5 pooled (see description) .b 2001 to 2427 427 to 1       427/427
(100 %)
0 diff
(100 %id)
BM903860 eye, retinoblastoma .b 2020 to 2890 1 to 873       873/954
(91 %)
10 diff
(99.0 %id)
AI494164 Kidney .b 2021 to 2418 398 to 1     Submitted on the opposite strand 398/398
(100 %)
0 diff
(100 %id)
DA145876 amygdala .b 2025 to 2592 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
AA601991 adrenal adenoma, adrenal gland .b 2028 to 2423 396 to 1       396/396
(100 %)
0 diff
(100 %id)
BM422468 testis .b 2037 to 2430 428 to 35     Submitted on the opposite strand 394/429
(91 %)
0 diff
(100 %id)
DA162732 amygdala .b 2039 to 2615 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA284162 corpus callosum .b 2040 to 2582 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
AW969915   .b 2070 to 2434 457 to 93     Submitted on the opposite strand 365/564
(64 %)
0 diff
(100 %id)
AA528470 Kidney .b 2070 to 2434 366 to 2       365/376
(97 %)
0 diff
(100 %id)
DA489579 brain .b 2115 to 2592 2 to 479   capped   478/478
(100 %)
0 diff
(100 %id)
BX508271   .b 2118 to 2765 1 to 648       648/648
(100 %)
0 diff
(100 %id)
F09477 brain, total brain .b 2128 to 2425 298 to 1       298/298
(100 %)
1 diff
(99.7 %id)
DA022542   .b 2195 to 2771 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
BF736659 bladder_tumor .b 2197 to 2665 474 to 6     Submitted on the opposite strand 469/474
(98 %)
0 diff
(100 %id)
F10453 brain, total brain .b 2202 to 2425 223 to 1       223/223
(100 %)
1 diff
(99.6 %id)
Z40502 brain, total brain .b 2205 to 2427 223 to 1       223/223
(100 %)
0 diff
(100 %id)
DA305271 hippocampus .b 2230 to 2810 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA773088 brain .b 2231 to 2812 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
BQ716431 sympathetic trunk .b 2246 to 3128 1 to 888       888/893
(99 %)
12 diff
(98.7 %id)
BG106811 lymph, lymphoma, cell line .b 2251 to 2973 1 to 712       712/970
(73 %)
27 diff
(97.3 %id)
BX406846 fetal liver, Liver .b 2265 to 3092 1 to 829       829/829
(100 %)
7 diff
(99.2 %id)
DA484401 brain .b 2299 to 2792 2 to 495   capped   494/494
(100 %)
0 diff
(100 %id)
DB172492 kidney, tumor tissue .b 2335 to 2913 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
CN338041 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 2366 to 3056 1 to 691       691/691
(100 %)
1 diff
(99.9 %id)
DA134435 alzheimer cortex .b 2379 to 2929 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA012747 adrenal gland .b 2393 to 2958 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
BM552687 leiomyosarcoma, uterus .b 2452 to 3201 97 to 857       761/1055
(72 %)
6 diff
(99.5 %id)
BG393890 embryonal carcinoma, cell line, testis .b 2459 to 3299 1 to 843       843/847
(99 %)
34 diff
(96.0 %id)
BM698210 eye, fetal eyes .b 2476 to 3148 1 to 673       673/673
(100 %)
3 diff
(99.6 %id)
DA539609 Kidney .b 2480 to 3083 2 to 605   capped   604/604
(100 %)
1 diff
(99.9 %id)
DA298137 hippocampus .b 2488 to 3045 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA908552   .b 2488 to 3050 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
BG613097 embryonal carcinoma, testis .b 2492 to 3151 1 to 660       660/660
(100 %)
2 diff
(99.7 %id)
CB999457 Pooled-Skin .b 2497 to 3198 1 to 717       717/726
(98 %)
18 diff
(97.6 %id)
BU154165 eye, retinoblastoma .b 2563 to 3436 1 to 876       876/877
(99 %)
13 diff
(98.6 %id)
BE885205 leiomyosarcoma, uterus .b 2597 to 3212 1 to 616       616/924
(66 %)
7 diff
(99.3 %id)
BP368009 thymus .b 2632 to 3210 1 to 579       579/579
(100 %)
0 diff
(100 %id)
BQ716165 sympathetic trunk .b 2676 to 3430 1 to 760       760/925
(82 %)
11 diff
(98.9 %id)
CR612452 HeLa cells Cot 25-normalized .b 2677 to 4414 1 to 1738       1738/1738
(100 %)
0 diff
(100 %id)
CR617134 HeLa cells Cot 25-normalized .b 2677 to 4392 1 to 1716       1716/1716
(100 %)
0 diff
(100 %id)
BX362598   .b 2677 to 3564 1 to 889   fully sequenced,   889/889
(100 %)
1 diff
(99.9 %id)
H89837 liver and spleen .b 2704 to 3131 1 to 435       435/437
(99 %)
14 diff
(96.8 %id)
BG392848 embryonal carcinoma, cell line, testis .b 2709 to 3478 1 to 763       763/955
(79 %)
18 diff
(98.2 %id)
CV575791 cornea, eye .b 2760 to 3364 1 to 605       605/605
(100 %)
1 diff
(99.9 %id)
BE769012 prostate_tumor .b 2768 to 3095 327 to 1       327/327
(100 %)
1 diff
(99.7 %id)
BP367553 thymus .b 2856 to 3435 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
AA451668   .b 2883 to 3328 459 to 14       446/459
(97 %)
0 diff
(100 %id)
BP339023 Spleen .b 2906 to 3486 1 to 580       580/580
(100 %)
2 diff
(99.7 %id)
AW629593 2 pooled high-grade transitional celltumors, genitourinary tract .b 2993 to 3478 1 to 486       486/486
(100 %)
0 diff
(100 %id)
DR761622 embryonic stem .b 3023 to 3871 1 to 849       849/849
(100 %)
2 diff
(99.8 %id)
EH342192   .b 3074 to 3168 1 to 95       95/95
(100 %)
0 diff
(100 %id)
BQ219463 leiomyosarcoma, uterus .b 3106 to 4119 1 to 1023       1023/1023
(100 %)
46 diff
(95.6 %id)
CV574741 cornea, eye .b 3138 to 3754 1 to 617       617/617
(100 %)
0 diff
(100 %id)
CN338043 embryonic stem cells, cell lines H1, H7, andH9 .b 3176 to 3813 1 to 638       638/638
(100 %)
0 diff
(100 %id)
DA184769 amygdala .b 3186 to 3600 2 to 416   capped   415/415
(100 %)
0 diff
(100 %id)
BG387929 embryonal carcinoma, cell line, testis .b 3187 to 3906 1 to 717       717/717
(100 %)
2 diff
(99.8 %id)
BF793083 adrenal cortex carcinoma, cell line, adrenal gland .b 3227 to 3896 1 to 669       669/938
(71 %)
7 diff
(99.3 %id)
BX096043 heart .b 3293 to 3816 1 to 524       524/524
(100 %)
0 diff
(100 %id)
W92593 heart .b 3293 to 3754 1 to 464       464/464
(100 %)
2 diff
(99.6 %id)
BP206855 coronary artery .b 3375 to 3956 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BI222736 cervical carcinoma cell line, cervix .b 3467 to 4078 1 to 614       614/614
(100 %)
2 diff
(99.7 %id)
TI_149292236   .b 3496 to 4448 1034 to 87   AAA   948/988
(95 %)
16 diff
(98.4 %id)
BX362597   .b 3534 to 4414 881 to 1   fully sequenced,   881/881
(100 %)
3 diff
(99.7 %id)
BM144743 leukopheresis .b 3534 to 3938 421 to 17   AAA   405/405
(100 %)
1 diff
(99.8 %id)
BP198040 adrenal gland .b 3548 to 4129 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
TI_149313623   .b 3553 to 4449 1001 to 115   AAA   887/921
(96 %)
23 diff
(97.6 %id)
TI_149301830   .b 3565 to 4449 972 to 100   AAA   873/952
(91 %)
17 diff
(98.3 %id)
BX406845 fetal liver, Liver .b 3578 to 4419 842 to 1       842/842
(100 %)
19 diff
(97.8 %id)
TI_149300589   .b 3602 to 4456 925 to 85   tiling clone, AAA   841/966
(87 %)
14 diff
(98.6 %id)
TI_149314942   .b 3602 to 4449 936 to 95   AAA   842/1002
(84 %)
11 diff
(99.0 %id)
TI_149315709   .b 3602 to 4449 917 to 78   AAA   840/984
(85 %)
9 diff
(99.1 %id)
BU633990 cell lines, Chondrosarcoma .b 3623 to 4449 845 to 19   AAA   827/827
(100 %)
1 diff
(99.9 %id)
CK003492 brain/CNS, Human Brain - Cerebellar Cortex .b 3633 to 4291 1 to 655       655/656
(99 %)
8 diff
(98.8 %id)
AV752784 Pituitary .b 3645 to 4260 1 to 617       617/727
(84 %)
13 diff
(98.3 %id)
BE070626 breast .b 3653 to 4209 558 to 1     Submitted on the opposite strand 558/564
(98 %)
4 diff
(99.3 %id)
BU616868 Cell Line, Chondrosarcoma .b 3661 to 4449 807 to 19   AAA   789/789
(100 %)
2 diff
(99.8 %id)
BU736000 eye, fetal eyes .b 3878 to 4449 589 to 19   AAA   571/571
(100 %)
1 diff
(99.9 %id)
DB303087 amygdala .b 3899 to 4449 551 to 1       551/551
(100 %)
0 diff
(100 %id)
DB295312 adrenal gland .b 3907 to 4449 543 to 1       543/543
(100 %)
0 diff
(100 %id)
CB044920 colon, juvenile granulosa tumor .b 3959 to 4449 507 to 17   AAA   491/491
(100 %)
2 diff
(99.6 %id)
AW613180 2 pooled high-grade transitional celltumors, genitourinary tract .b 3960 to 4449 490 to 1       490/490
(100 %)
0 diff
(100 %id)
W94538 heart .b 4026 to 4449 424 to 1       424/424
(100 %)
0 diff
(100 %id)
DB363631   .b 4068 to 4448 385 to 1       385/385
(100 %)
4 diff
(99.0 %id)
H90687 liver and spleen .b 4156 to 4425 270 to 1       270/270
(100 %)
1 diff
(99.7 %id)
BC010136 Muscle, rhabdomyosarcoma .c 1 to 1024 1 to 1024 exact tiling clone, available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 1024/1044
(98 %)
1 diff
(100.0 %id)
BQ894407 brain, neuroblastoma, cell line .c 152 to 1052 1 to 902 N286I I287S K288N tiling clone,   902/902
(100 %)
7 diff
(99.3 %id)
DB528004 testis .c 539 to 1022 1 to 484     Submitted on the opposite strand 484/484
(100 %)
0 diff
(100 %id)
BY999064   .c 667 to 1024 1 to 350     Submitted on the opposite strand 350/356
(98 %)
18 diff
(95.0 %id)
BP198855 brain .d 1 to 578 5 to 582       582/582
(100 %)
1 diff
(99.9 %id)
AK292907 trachea .d 1 to 1260 5 to 1264 exact tiling clone,   1264/1264
(100 %)
1 diff
(100.0 %id)
BP222730   .d 1 to 577 5 to 582       582/582
(100 %)
3 diff
(99.5 %id)
DA030042   .d 1 to 513 5 to 517   capped   516/516
(100 %)
1 diff
(99.9 %id)
DA154574 amygdala .d 1 to 556 5 to 561   capped   560/560
(100 %)
4 diff
(99.3 %id)
DA413504 thalamus .d 1 to 553 5 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DB225845 trachea .d 1 to 577 5 to 582   capped   581/581
(100 %)
2 diff
(99.7 %id)
DA298947 hippocampus .d 1 to 571 3 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA479288   .d 1 to 567 3 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA416387 thalamus .d 1 to 566 2 to 569   capped   568/568
(100 %)
4 diff
(99.3 %id)
DA917158 small intestine .d 5 to 572 2 to 572   capped   571/571
(100 %)
5 diff
(99.2 %id)
DB267552 uterus .d 20 to 428 2 to 410   capped   409/409
(100 %)
1 diff
(99.8 %id)
DA295411 hippocampus .d 23 to 602 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
AU280072   .d 24 to 558 1 to 536       536/536
(100 %)
2 diff
(99.7 %id)
BC000225 Eye, retinoblastoma .e 1 to 1944 2 to 1945 exact tiling clone, available from MGC, AAA   1945/1945
(100 %)
0 diff
(100 %id)
DB462589 testis .e 19 to 516 1 to 498       498/498
(100 %)
6 diff
(98.8 %id)
BE252918 eye, retinoblastoma .e 20 to 679 1 to 659   AAA   659/738
(89 %)
25 diff
(96.7 %id)
BE251354 eye, retinoblastoma .e 21 to 612 12 to 605       594/607
(97 %)
8 diff
(98.7 %id)
BX489288   .e 39 to 455 1 to 417       417/417
(100 %)
1 diff
(99.8 %id)
BF171440 blood .e 61 to 284 1 to 226       226/236
(95 %)
13 diff
(94.5 %id)
DB139423 thymus .e 160 to 691 2 to 533   capped   532/532
(100 %)
1 diff
(99.9 %id)
CD243480 testis .e 261 to 1065 1 to 814       814/897
(90 %)
8 diff
(99.2 %id)
EL735911 mixed .e 293 to 898 1 to 606       606/606
(100 %)
0 diff
(100 %id)
TI_1948224617   .e 293 to 1128 128 to 963 A234I V236I E242K D252N N258M ...     836/1369
(61 %)
27 diff
(98.1 %id)
TI_1948224618   .e 293 to 884 126 to 718       593/1337
(44 %)
16 diff
(98.9 %id)
TI_1948224921   .e 293 to 664 128 to 499       372/399
(93 %)
6 diff
(98.5 %id)
TI_1948225256   .e 293 to 1121 130 to 964       835/1475
(56 %)
26 diff
(98.3 %id)
TI_1948225257   .e 293 to 973 127 to 810       684/1331
(51 %)
16 diff
(98.8 %id)
TI_1948225581   .e 293 to 634 124 to 465       342/369
(92 %)
11 diff
(97.1 %id)
TI_1948225582   .e 293 to 973 129 to 811       683/1261
(54 %)
20 diff
(98.5 %id)
TI_1948224924   .e 294 to 1128 951 to 119       833/1309
(63 %)
2 diff
(99.9 %id)
TI_1948225584   .e 329 to 1128 920 to 119       802/1341
(59 %)
17 diff
(98.8 %id)
DA800932 brain .e 383 to 771 2 to 390   capped   389/389
(100 %)
2 diff
(99.5 %id)
DA223974 brain .e 394 to 941 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
TI_1948224923   .e 396 to 1128 857 to 118       740/1373
(53 %)
16 diff
(98.9 %id)
BP231068 brain .e 425 to 1006 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BP231106 brain .e 425 to 983 1 to 560       560/583
(96 %)
15 diff
(97.5 %id)
DA218201 brain .e 428 to 974 2 to 548   capped   547/552
(99 %)
2 diff
(99.7 %id)
BG537911 lung .e 458 to 981 1 to 525       525/714
(73 %)
20 diff
(97.2 %id)
TI_1948225583   .e 479 to 1128 768 to 117       652/1343
(48 %)
15 diff
(98.9 %id)
AV723052 hypothalamus .e 490 to 935 8 to 450       443/461
(96 %)
8 diff
(98.3 %id)
AV724044 hypothalamus .e 490 to 955 20 to 479       460/482
(95 %)
11 diff
(97.8 %id)
BM467119 eye, retinoblastoma .e 512 to 1188 30 to 706       677/1134
(59 %)
13 diff
(98.9 %id)
DA321475 hippocampus .e 535 to 1022 2 to 489   capped   488/488
(100 %)
0 diff
(100 %id)
DA230102 brain .e 582 to 1146 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
CN338040 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 598 to 809 1 to 212       212/212
(100 %)
1 diff
(99.6 %id)
R13313 whole brain .e 812 to 1161 1 to 352       352/352
(100 %)
5 diff
(98.6 %id)
BF743410 breast .e 853 to 1160 314 to 7     Submitted on the opposite strand 308/314
(98 %)
0 diff
(100 %id)
BX423839 fetal liver, Liver .e 886 to 1906 1020 to 1       1020/1020
(100 %)
5 diff
(99.6 %id)
TI_1948225259   .e 972 to 1942 1031 to 55   AAA   977/1256
(77 %)
42 diff
(96.7 %id)
TI_1948224620   .e 973 to 1942 1039 to 63       977/1255
(77 %)
34 diff
(97.3 %id)
TI_1948224619   .e 986 to 1944 1026 to 59       968/1329
(72 %)
27 diff
(98.0 %id)
TI_1948225258   .e 1046 to 1944 955 to 59   AAA   897/1197
(74 %)
9 diff
(99.3 %id)
BE693625 breast .e 1077 to 1706 1 to 629       629/629
(100 %)
6 diff
(99.1 %id)
BE693622 breast .e 1101 to 1609 1 to 507       507/507
(100 %)
3 diff
(99.5 %id)
BE618856 eye, retinoblastoma .e 1125 to 1904 839 to 24       816/839
(97 %)
54 diff
(93.6 %id)
BE070628 breast .e 1179 to 1698 532 to 13     Submitted on the opposite strand 520/532
(97 %)
0 diff
(100 %id)
BU625364 cell lines, Enchondroma .e 1201 to 1937 755 to 19   AAA   737/737
(100 %)
0 diff
(100 %id)
BU615205 Bone, Human Chondrosarcoma Cell Line .e 1201 to 1936 753 to 19   AAA   735/735
(100 %)
2 diff
(99.8 %id)
AI684281 serous papillary carcinoma, high grade, 2pooled tumors, uterus .e 1220 to 1937 714 to 12   AAA   703/724
(97 %)
32 diff
(95.6 %id)
CA503418 Human Lung Epithelial cells, lung .e 1226 to 1937 730 to 19   AAA   712/712
(100 %)
2 diff
(99.8 %id)
BI715262 Pancreas, Purified pancreatic islet .e 1227 to 1636 1 to 410       410/410
(100 %)
0 diff
(100 %id)
BM974435 lung .e 1227 to 1936 728 to 19   AAA   710/710
(100 %)
1 diff
(99.9 %id)
BQ773437 Chondrosarcoma Cell line .e 1227 to 1937 729 to 19   AAA   711/711
(100 %)
0 diff
(100 %id)
CA430865 cell lines, Chondrosarcoma .e 1232 to 1944 731 to 19   AAA   713/713
(100 %)
1 diff
(99.9 %id)
CA423992 cell lines, Chondrosarcoma .e 1233 to 1937 717 to 19   AAA   699/699
(100 %)
6 diff
(99.2 %id)
BM976629 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 1240 to 1944 722 to 19   AAA   704/704
(100 %)
1 diff
(99.9 %id)
BM980124 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 1240 to 1937 717 to 19   AAA   699/699
(100 %)
2 diff
(99.8 %id)
CB306493 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 1240 to 1937 716 to 19   AAA   698/698
(100 %)
1 diff
(99.9 %id)
AA303072 uterus .e 1251 to 1556 1 to 307       307/307
(100 %)
1 diff
(99.7 %id)
N55902   .e 1253 to 1371 1 to 119       119/119
(100 %)
0 diff
(100 %id)
W00384 melanocyte .e 1258 to 1451 1 to 192       192/192
(100 %)
4 diff
(98.0 %id)
N39648 melanocyte .e 1270 to 1507 1 to 239   fully sequenced,   239/239
(100 %)
1 diff
(99.6 %id)
BE909163 epithelioid carcinoma, Pancreas .e 1271 to 1940 703 to 19     Submitted on the opposite strand 685/773
(88 %)
0 diff
(100 %id)
BQ189465 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .e 1272 to 1459 1 to 188   fully sequenced,   188/188
(100 %)
2 diff
(99.0 %id)
TI_151734060   .e 1272 to 1944 755 to 87   AAA   669/895
(74 %)
14 diff
(98.5 %id)
CB306412 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 1281 to 1937 675 to 19   AAA   657/657
(100 %)
0 diff
(100 %id)
CB305494 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 1294 to 1937 662 to 19   AAA   644/644
(100 %)
1 diff
(99.9 %id)
BQ021744 lung, Metastatic Chondrosarcoma .e 1304 to 1937 652 to 19   AAA   634/634
(100 %)
0 diff
(100 %id)
BF942993 nervous_normal .e 1343 to 1519 221 to 34     Submitted on the opposite strand 188/221
(85 %)
0 diff
(100 %id)
AA043161.
matches multiple genes
uterus .e 1346 to 1902 1 to 556     also hits gene flusnoybu 556/557
(99 %)
10 diff
(98.3 %id)
AA778596   .e 1393 to 1939 547 to 1       547/547
(100 %)
7 diff
(98.8 %id)
BI792460 Pancreas, Purified pancreatic islet .e 1405 to 1940 540 to 5       536/540
(99 %)
0 diff
(100 %id)
AA523532 lung, lung tumor .e 1417 to 1940 524 to 1       524/527
(99 %)
25 diff
(95.3 %id)
BF590199 pooled .e 1421 to 1937 531 to 15   AAA   517/517
(100 %)
0 diff
(100 %id)
BF433196 carcinoid, lung .e 1421 to 1938 524 to 7       518/524
(98 %)
0 diff
(100 %id)
CB132386 Liver .e 1421 to 1940 534 to 15     Submitted on the opposite strand 520/534
(97 %)
4 diff
(99.3 %id)
AA843889 parathyroid gland, parathyroid tumor .e 1425 to 1940 520 to 5       516/520
(99 %)
0 diff
(100 %id)
CK300464 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .e 1429 to 1944 534 to 19   fully sequenced, AAA   516/516
(100 %)
0 diff
(100 %id)
AI027535 parathyroid gland, parathyroid tumor .e 1430 to 1940 516 to 6       511/516
(99 %)
0 diff
(100 %id)
AI922280 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .e 1437 to 1937 501 to 1       501/501
(100 %)
0 diff
(100 %id)
AW614751 colon, moderately-differentiated adenocarcinoma .e 1438 to 1939 502 to 1       502/502
(100 %)
0 diff
(100 %id)
AI859616 serous papillary carcinoma, high grade, 2pooled tumors, uterus .e 1439 to 1940 505 to 4       502/505
(99 %)
0 diff
(100 %id)
AI859621 serous papillary carcinoma, high grade, 2pooled tumors, uterus .e 1439 to 1940 502 to 1       502/502
(100 %)
0 diff
(100 %id)
BF514520   .e 1441 to 1937 514 to 18   AAA   497/497
(100 %)
0 diff
(100 %id)
AI186544 heart .e 1442 to 1939 498 to 1       498/498
(100 %)
0 diff
(100 %id)
DB527464 testis .e 1464 to 1935 1 to 472     Submitted on the opposite strand 472/474
(99 %)
1 diff
(99.8 %id)
AI077539   .e 1470 to 1940 473 to 3       471/473
(99 %)
0 diff
(100 %id)
N26582 melanocyte .e 1477 to 1942 465 to 1   fully sequenced,   465/465
(100 %)
2 diff
(99.6 %id)
DB541772 hippocampus .e 1481 to 1937 1 to 457     Submitted on the opposite strand 457/457
(100 %)
4 diff
(99.2 %id)
AI041989 parathyroid gland, parathyroid tumor .e 1492 to 1940 456 to 6       451/456
(98 %)
0 diff
(100 %id)
AI363385 brain, glioblastoma (pooled) .e 1492 to 1944 454 to 2       453/454
(99 %)
0 diff
(100 %id)
AW105528 ovary, tumor, 5 pooled (see description) .e 1492 to 1937 446 to 1       446/446
(100 %)
1 diff
(99.8 %id)
AI589690 anaplastic oligodendroglioma, brain .e 1493 to 1940 454 to 7       448/454
(98 %)
0 diff
(100 %id)
BP334204 salivary gland .e 1495 to 1937 1 to 443       443/564
(78 %)
2 diff
(99.7 %id)
AW665965 pooled .e 1497 to 1936 440 to 1       440/443
(99 %)
1 diff
(99.8 %id)
DB547881 hippocampus .e 1498 to 1935 1 to 436     Submitted on the opposite strand 436/438
(99 %)
2 diff
(99.6 %id)
AW131230 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .e 1508 to 1944 436 to 1       436/436
(100 %)
2 diff
(99.6 %id)
DB546604 hippocampus .e 1511 to 1937 1 to 427     Submitted on the opposite strand 427/427
(100 %)
2 diff
(99.6 %id)
AA678377 liver and spleen .e 1519 to 1939 421 to 1       421/421
(100 %)
0 diff
(100 %id)
CR742471 pooled germ cell tumors .e 1524 to 1937 1 to 414   AAA   414/414
(100 %)
0 diff
(100 %id)
AA886724 Kidney .e 1525 to 1937 435 to 23   AAA   413/413
(100 %)
0 diff
(100 %id)
AI559135 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .e 1529 to 1940 417 to 6       412/417
(98 %)
0 diff
(100 %id)
AI308219 2 pooled tumors (clear cell type), Kidney .e 1535 to 1940 411 to 6       406/411
(98 %)
0 diff
(100 %id)
AA805483 germinal center B cell .e 1537 to 1884 348 to 1       348/348
(100 %)
0 diff
(100 %id)
AA906717 carcinoid, lung .e 1538 to 1939 402 to 1       402/402
(100 %)
0 diff
(100 %id)
H37769 eye, retina .e 1541 to 1937 405 to 1       405/405
(100 %)
11 diff
(97.3 %id)
AI034311 parathyroid gland, parathyroid tumor .e 1541 to 1940 404 to 5       400/404
(99 %)
0 diff
(100 %id)
AI143348 heart .e 1542 to 1940 401 to 3       399/401
(99 %)
0 diff
(100 %id)
AI436336 pooled .e 1542 to 1940 402 to 4       399/402
(99 %)
0 diff
(100 %id)
AI472321 pooled .e 1542 to 1937 411 to 16   AAA   396/396
(100 %)
0 diff
(100 %id)
AW058355 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .e 1542 to 1937 420 to 25   AAA   396/397
(99 %)
12 diff
(97.0 %id)
BF223306 carcinoid, lung .e 1542 to 1940 402 to 4       399/402
(99 %)
0 diff
(100 %id)
AW470264 carcinoid, lung .e 1543 to 1940 407 to 10       398/407
(97 %)
0 diff
(100 %id)
W93343 liver and spleen .e 1546 to 1937 392 to 1       392/392
(100 %)
0 diff
(100 %id)
AW339766 carcinoid, lung .e 1548 to 1940 393 to 1       393/393
(100 %)
2 diff
(99.5 %id)
AW510327 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .e 1551 to 1937 387 to 1       387/387
(100 %)
0 diff
(100 %id)
AA653708 normal prostate, Prostate .e 1562 to 1937 376 to 1       376/376
(100 %)
0 diff
(100 %id)
AA927593 pooled .e 1564 to 1938 375 to 1       375/375
(100 %)
0 diff
(100 %id)
BF436226 pooled .e 1576 to 1937 373 to 12   AAA   362/367
(98 %)
2 diff
(99.5 %id)
BF436173 pooled .e 1577 to 1940 371 to 4       368/371
(99 %)
0 diff
(100 %id)
EC571377 Prostate .e 1623 to 1727 1 to 105       105/105
(100 %)
0 diff
(100 %id)
FN093065 breast carcinoma .e 1627 to 1728 1 to 105       105/106
(99 %)
4 diff
(96.3 %id)
BF590164 pooled .e 1629 to 1937 355 to 45   AAA   311/311
(100 %)
3 diff
(99.1 %id)
AA303073 uterus .e 1640 to 1937 297 to 1       297/297
(100 %)
1 diff
(99.7 %id)
AI350474   .e 1641 to 1944 307 to 4       304/307
(99 %)
0 diff
(100 %id)
BX449137 fetal liver, Liver .e 1649 to 1882 234 to 1       234/237
(98 %)
11 diff
(95.4 %id)
FN137589 breast carcinoma .e 1652 to 1761 111 to 1     Submitted on the opposite strand 111/111
(100 %)
1 diff
(99.1 %id)
AI689030 serous papillary carcinoma, high grade, 2pooled tumors, uterus .e 1661 to 1944 284 to 1       284/284
(100 %)
0 diff
(100 %id)
AA526410 ovary .e 1681 to 1938 258 to 1       258/264
(97 %)
1 diff
(99.7 %id)
AA627270 colon, colon tumor RER+ .e 1687 to 1937 251 to 1       251/251
(100 %)
0 diff
(100 %id)
AW149950 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .e 1691 to 1937 271 to 25   AAA   247/249
(99 %)
13 diff
(94.8 %id)
AW438889 serous papillary carcinoma, high grade, 2pooled tumors, uterus .e 1702 to 1939 238 to 1       238/238
(100 %)
0 diff
(100 %id)
AI659899 Prostate .e 1742 to 1937 210 to 15   AAA   196/196
(100 %)
1 diff
(99.5 %id)
BG108666.
matches multiple genes
retina, Retinal Pigment Epithelium sheets .e 1751 to 1940 1 to 190   tiling clone, also hits gene flusnoybu 190/192
(98 %)
1 diff
(99.5 %id)
AI933859 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .e 1751 to 1937 202 to 15   AAA   188/188
(100 %)
2 diff
(99.0 %id)
H85965 eye, retina .e 1767 to 1938 172 to 1       172/172
(100 %)
1 diff
(99.5 %id)
N72136 melanocyte .e 1787 to 1942 156 to 1       156/156
(100 %)
0 diff
(100 %id)
AW089420 brain, tumor, 5 pooled (see description) .e 1810 to 1937 148 to 21   AAA   128/128
(100 %)
2 diff
(98.5 %id)
DA915703 small intestine .f 1 to 808 2 to 806   tiling clone, capped   807/805
(100 %)
7 diff
(99.2 %id)
AU135720 placenta .f 2 to 640 2 to 649   capped   648/655
(98 %)
12 diff
(98.2 %id)
AL536623 brain, fetal brain .f 44 to 1040 1 to 985 Q239H L240S T241L R242E M243C ...     985/985
(100 %)
16 diff
(98.4 %id)
BY797844 eye .f 478 to 1074 1 to 597       597/597
(100 %)
0 diff
(100 %id)
DB012077 esophageal, tumor tissue .f 599 to 1167 2 to 570   tiling clone, capped   569/569
(100 %)
0 diff
(100 %id)
BE940458 uterus_tumor .f 656 to 1030 396 to 23       374/396
(94 %)
0 diff
(100 %id)
CR736497   .f 812 to 1126 1 to 315       315/316
(99 %)
1 diff
(99.7 %id)
BQ027316 mixed .f 915 to 1151 255 to 19   AAA   237/237
(100 %)
1 diff
(99.6 %id)
CA407587 adipose .f 940 to 1245 1 to 306       306/307
(99 %)
3 diff
(99.1 %id)
AV723604 hypothalamus .f 941 to 1416 1 to 468       468/471
(99 %)
8 diff
(98.4 %id)
TI_59391900   .f 967 to 1751 89 to 872       784/784
(100 %)
1 diff
(99.9 %id)
BM013953 breast, mammary adenocarcinoma, cell line .f 968 to 1751 1 to 783       783/783
(100 %)
1 diff
(99.9 %id)
DB237534 trachea .f 975 to 1510 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
BQ720597 sympathetic trunk .f 1051 to 1951 1 to 903   tiling clone,   903/903
(100 %)
7 diff
(99.3 %id)
BF351885 head_neck .f 1068 to 1180 1 to 113       113/113
(100 %)
0 diff
(100 %id)
AL566414 brain, fetal brain .f 1118 to 2211 1086 to 1       1086/1086
(100 %)
17 diff
(98.5 %id)
R57462   .f 1119 to 1301 1 to 183       183/183
(100 %)
3 diff
(98.4 %id)
CB121734 Liver .f 1150 to 1769 1 to 620       620/620
(100 %)
0 diff
(100 %id)
BI918501 brain .f 1234 to 2069 1 to 833       833/838
(99 %)
13 diff
(98.5 %id)
TI_57238621   .f 1234 to 2069 1 to 833       833/838
(99 %)
13 diff
(98.5 %id)
BX095372 multiple sclerosis lesions .f 1265 to 2023 36 to 794       759/794
(95 %)
6 diff
(99.3 %id)
DN915329   .f 1277 to 1906 1 to 627       627/627
(100 %)
4 diff
(99.4 %id)
N50338 multiple sclerosis lesions .f 1363 to 1487 1 to 125       125/125
(100 %)
0 diff
(100 %id)
AA310417   .f 1391 to 1904 1 to 517       517/517
(100 %)
3 diff
(99.5 %id)
TI_149303070   .f 1489 to 2244 841 to 87   AAA   755/983
(76 %)
7 diff
(99.3 %id)
BM981143 lung, Primary Lung Cystic Fibrosis EpithelialCells .f 1498 to 2244 764 to 19   AAA   746/746
(100 %)
6 diff
(99.2 %id)
BU853467 testis .f 1531 to 2242 1 to 711       711/715
(99 %)
3 diff
(99.6 %id)
AW373201 breast .f 1537 to 2042 1 to 507       507/507
(100 %)
2 diff
(99.7 %id)
AA318881 adrenal gland .f 1539 to 1825 1 to 288       288/288
(100 %)
2 diff
(99.4 %id)
AW964471   .f 1573 to 1985 1 to 413       413/413
(100 %)
0 diff
(100 %id)
AA778694   .f 1654 to 2251 602 to 3       600/602
(99 %)
0 diff
(100 %id)
CX785773 human embryonic stem cells .f 1661 to 2530 1 to 866       866/866
(100 %)
5 diff
(99.5 %id)
DN915330   .f 1669 to 2242 572 to 2       571/572
(99 %)
0 diff
(100 %id)
AW235583 Kidney .f 1690 to 2253 565 to 3       563/565
(99 %)
0 diff
(100 %id)
BM145571 leukopheresis .f 1701 to 2243 559 to 17   AAA   543/543
(100 %)
5 diff
(99.1 %id)
AI796265 Kidney .f 1719 to 2251 540 to 8       533/540
(98 %)
0 diff
(100 %id)
AA287861 germinal center B cell .f 1735 to 2223 1 to 489       489/489
(100 %)
0 diff
(100 %id)
DB331512 small intestine .f 1737 to 2244 500 to 1       500/502
(99 %)
15 diff
(97.1 %id)
AW631310 pooled .f 1739 to 2251 519 to 7       513/519
(98 %)
0 diff
(100 %id)
AI813280 2 pooled tumors (clear cell type), Kidney .f 1745 to 2246 501 to 2       500/501
(99 %)
0 diff
(100 %id)
AW263646 pooled .f 1761 to 2251 493 to 3       491/493
(99 %)
0 diff
(100 %id)
BE673219 Prostate .f 1774 to 2245 472 to 1       472/472
(100 %)
2 diff
(99.6 %id)
N51563 multiple sclerosis lesions .f 1793 to 2246 458 to 1       458/460
(99 %)
6 diff
(98.7 %id)
AW080330 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .f 1804 to 2244 441 to 1       441/441
(100 %)
4 diff
(99.1 %id)
AI200929   .f 1813 to 2244 449 to 18   AAA   432/432
(100 %)
0 diff
(100 %id)
AW662877 pooled .f 1817 to 2251 437 to 3   tiling clone,   435/437
(99 %)
0 diff
(100 %id)
AI809853 pooled .f 1818 to 2244 443 to 16   AAA   428/428
(100 %)
2 diff
(99.6 %id)
FN056678 breast carcinoma .f 1822 to 1885 1 to 64       64/65
(98 %)
2 diff
(97.0 %id)
AI797954 pooled .f 1837 to 2246 411 to 2       410/411
(99 %)
0 diff
(100 %id)
AI798516 ovary, tumor, 5 pooled (see description) .f 1846 to 2246 401 to 1       401/401
(100 %)
1 diff
(99.8 %id)
DB374055 placenta .f 1878 to 2244 368 to 2       367/370
(99 %)
0 diff
(100 %id)
AI698715 pooled .f 1932 to 2251 324 to 4       321/324
(99 %)
0 diff
(100 %id)
BM690753 eye, Retina Foveal and Macular .f 2027 to 2650 8 to 631   tiling clone,   624/631
(98 %)
6 diff
(99.1 %id)
BF511508   .f 2063 to 2251 204 to 16   AAA   189/189
(100 %)
1 diff
(99.5 %id)
CD237563 Pituitary .f 2102 to 2765 29 to 690       662/692
(95 %)
31 diff
(95.6 %id)
FN154048 breast carcinoma .f 2184 to 2294 112 to 1     Submitted on the opposite strand 112/112
(100 %)
1 diff
(99.2 %id)
TI_159723914   .f 2427 to 2953 617 to 91   AAA   527/1017
(51 %)
3 diff
(99.8 %id)
CA944610 Human Lung Epithelial cells, lung .f 2427 to 2953 543 to 17   AAA   527/579
(91 %)
3 diff
(99.5 %id)
DB540496 hippocampus .f 2459 to 2953 1 to 495   tiling clone, Submitted on the opposite strand 495/495
(100 %)
0 diff
(100 %id)
AI986333 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .f 2706 to 3292 583 to 1       583/583
(100 %)
18 diff
(97.0 %id)
BX641232   .f 2897 to 3527 630 to 1   tiling clone, Submitted on the opposite strand 630/630
(100 %)
3 diff
(99.6 %id)
AI339968   .f 2939 to 3293 355 to 1   tiling clone,   355/355
(100 %)
0 diff
(100 %id)
AI804360 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 3212 to 3462 367 to 117   tiling clone,   251/367
(68 %)
0 diff
(100 %id)
BJ989589 hepatoblastoma .g 1 to 583 1 to 583   tiling clone,   583/583
(100 %)
1 diff
(99.9 %id)
BJ989590 hepatoblastoma .g 1767 to 2306 540 to 1   tiling clone,   540/540
(100 %)
0 diff
(100 %id)
CD251839 testis .h 1 to 696 23 to 724 R100K L134F D136R L137S E138G ... tiling clone,   702/874
(80 %)
17 diff
(98.1 %id)
DA041118 bladder .i-u 1 to 564 2 to 565 exact tiling clone, capped   564/564
(100 %)
1 diff
(99.9 %id)
DB162296 thymus .j 1 to 524 5 to 528 exact tiling clone, capped   527/527
(100 %)
0 diff
(100 %id)
DB477978 hippocampus .j 1 to 496 2 to 497 exact     497/497
(100 %)
6 diff
(98.8 %id)
AK056810 Prostate .k 1 to 2483 2 to 2483 L72F D74R E75* tiling clone, available from FLJ,   2483/2483
(100 %)
4 diff
(99.9 %id)
DA865283 Prostate .k 1 to 778 2 to 778   capped   777/777
(100 %)
4 diff
(99.5 %id)
AL599640   .k 146 to 514 14 to 383       370/383
(96 %)
6 diff
(98.5 %id)
DB329255 Prostate .k 2010 to 2483 478 to 1 V2X R4K D6X C9X L14X ... tiling clone,   478/478
(100 %)
14 diff
(97.1 %id)
TI_45209047   .l 1 to 606 89 to 694       606/695
(87 %)
7 diff
(99.0 %id)
BG706823 brain, hypothalamus .l 2 to 623 1 to 632       632/706
(89 %)
33 diff
(95.4 %id)
BI596619 brain, hypothalamus .l 2 to 606 1 to 605   tiling clone,   605/606
(99 %)
7 diff
(98.9 %id)
BP313078 mammary gland .l 7 to 588 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
DA044312 bladder .l 8 to 558 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA472833   .l 8 to 542 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
DA490421 brain .l 8 to 588 2 to 582   capped   581/581
(100 %)
2 diff
(99.7 %id)
DA519221 brain .l 8 to 503 2 to 497   capped   496/496
(100 %)
1 diff
(99.8 %id)
DA498873 brain .l 10 to 567 2 to 560   capped   559/559
(100 %)
3 diff
(99.5 %id)
DB494141 hypothalamus .l 10 to 537 1 to 528       528/528
(100 %)
2 diff
(99.7 %id)
DB495595 hypothalamus .l 10 to 516 1 to 507       507/507
(100 %)
5 diff
(99.1 %id)
DA841504 placenta .l 16 to 565 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA330662 hippocampus .l 17 to 562 2 to 547   capped   546/550
(99 %)
3 diff
(99.5 %id)
DA519839 brain .l 34 to 584 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA880561   .l 37 to 763 2 to 724   tiling clone, capped   723/723
(100 %)
16 diff
(97.8 %id)
TI_57148409   .l 86 to 939 45 to 892       851/892
(95 %)
18 diff
(98.0 %id)
BI759726 pooled colon, kidney, stomach .l 91 to 939 1 to 843   tiling clone,   846/843
(100 %)
14 diff
(98.4 %id)
AA431218   .l 714 to 1104 1 to 390   tiling clone,   390/390
(100 %)
2 diff
(99.5 %id)
BG189137   .l 836 to 1463 1 to 627 N12F tiling clone,   627/627
(100 %)
23 diff
(96.4 %id)
BQ717763 sympathetic trunk .m-u 1 to 808 1 to 816 Y20D V24G N26D V33G L37V ... tiling clone,   816/969
(84 %)
30 diff
(97.0 %id)
DB036537 testis .n 1 to 575 2 to 576 exact tiling clone, capped   575/575
(100 %)
0 diff
(100 %id)
DA307954 hippocampus .o 1 to 565 2 to 566 S19P tiling clone, capped   565/566
(99 %)
2 diff
(99.7 %id)
DB441954 testis .o 43 to 468 1 to 427 Q21P S22E V23R Q24A T25D ...     427/427
(100 %)
5 diff
(98.9 %id)
DB447701 testis .o 44 to 469 1 to 427 exact tiling clone,   427/427
(100 %)
4 diff
(99.1 %id)
DB512788 testis .p 1 to 423 1 to 422 Q3H G15E D16T S17V A18Q ... tiling clone, Submitted on the opposite strand 423/424
(99 %)
7 diff
(98.4 %id)
BF887265 testis_normal .q-u 1 to 237 15 to 251 L9P I14X tiling clone,   237/258
(91 %)
2 diff
(99.3 %id)
180 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i-u, .j, .k, .l, .m-u, .n, .o, .p, .q-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C