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Gene OTOP2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
14 supporting clones for gene OTOP2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_178160.2   .a 1 to 2147 1 to 2147 exact RefSeq,   2147/2147
(100 %)
0 diff
(100 %id)
BQ326837 colon_normal .a 279 to 834 1 to 557   tiling clone,   557/557
(100 %)
13 diff
(97.7 %id)
BQ326836 colon_normal .a 291 to 871 6 to 580   tiling clone,   575/580
(99 %)
14 diff
(97.6 %id)
BQ327020 colon_normal .a 444 to 813 375 to 6   tiling clone,   370/375
(98 %)
1 diff
(99.8 %id)
CV377338 colon_normal .a 1038 to 1329 308 to 16   tiling clone, Submitted on the opposite strand 293/310
(94 %)
0 diff
(100 %id)
BI828712 brain, medulla .a 1167 to 1840 674 to 1   tiling clone, Submitted on the opposite strand 674/674
(100 %)
1 diff
(99.9 %id)
TI_57172435   .a 1167 to 1845 704 to 26     Submitted on the opposite strand 679/704
(96 %)
1 diff
(99.9 %id)
BM466860 eye, retinoblastoma .a 1815 to 2147 1 to 333   tiling clone, AAA   333/333
(100 %)
1 diff
(99.7 %id)
AW155641 colon .a 1991 to 2147 1 to 157       157/157
(100 %)
0 diff
(100 %id)
DW440064 Liver .b-u 1 to 224 17 to 240 exact tiling clone,   224/240
(93 %)
6 diff
(97.5 %id)
DW451233 Liver .b-u 1 to 178 17 to 194 E36D P49H tiling clone,   178/194
(91 %)
6 diff
(97.0 %id)
DW457667 Liver .b-u 1 to 145 17 to 161   tiling clone,   145/161
(90 %)
6 diff
(96.3 %id)
AK000063 colon Gene OTOP2, variant not shown       available from FLJ, AAA This clone was ignored    
DB060234 testis Gene OTOP2, variant not shown       capped This clone was ignored    
DB339175 testis Gene OTOP2, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C