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Gene OSBPL1ATABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
396 supporting clones for gene OSBPL1A back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA349101 substantia nigra .a -28340 to -27846 2 to 498   capped   497/497
(100 %)
2 diff
(99.6 %id)
DA502541 brain .a 1 to 563 2 to 564   tiling clone, capped   563/563
(100 %)
1 diff
(99.9 %id)
AK096358   .a 13 to 3174 1 to 3162 V74A Y335H C769Y available from FLJ,   3162/3162
(100 %)
3 diff
(100.0 %id)
DA744805   .a 14 to 506 2 to 494   capped   493/493
(100 %)
1 diff
(99.8 %id)
CB266441 adipose .a 23 to 583 1 to 561       561/561
(100 %)
3 diff
(99.5 %id)
DA290094 hippocampus .a 47 to 618 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
AF392450   .a 56 to 4216 1 to 4153 S810P tiling clone,   4153/4158
(99 %)
16 diff
(99.7 %id)
NM_080597.2   .a 56 to 4221 1 to 4165 exact RefSeq,   4165/4165
(100 %)
6 diff
(99.9 %id)
DR002893 fetal brain .a 66 to 629 8 to 571       564/571
(98 %)
6 diff
(99.0 %id)
AK292895 trachea .a 81 to 3172 1 to 3092 Q425R K678E F944S     3092/3094
(99 %)
6 diff
(99.9 %id)
DB224623 trachea .a 82 to 647 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
BC136452 Testicle, PCR rescued clones .a 116 to 4112 1 to 3997 exact tiling clone,   3997/3997
(100 %)
0 diff
(100 %id)
BC144117 Brain, cerebellum, PCR rescued clones .a 116 to 4112 1 to 3996 V782A D783Y     3996/3996
(100 %)
3 diff
(100.0 %id)
TI_2194646306   .a 116 to 1243 56 to 1187       1130/1199
(94 %)
22 diff
(98.2 %id)
DA501769 brain .a 339 to 820 2 to 484   capped   483/483
(100 %)
7 diff
(98.6 %id)
TI_1971559967   .a 470 to 1314 1 to 848       848/848
(100 %)
17 diff
(98.0 %id)
TI_2194642866   .a 470 to 1111 2 to 643       642/643
(99 %)
8 diff
(98.8 %id)
DB191907 ovary, tumor tissue .a 619 to 1155 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
BX280397 breast, mammary adenocarcinoma, cell line .a 754 to 1231 1 to 478       478/478
(100 %)
0 diff
(100 %id)
BG574169 breast, mammary adenocarcinoma, cell line .a 754 to 1512 1 to 758       758/760
(99 %)
6 diff
(99.3 %id)
BE261015 brain, neuroblastoma .a 860 to 1391 1 to 554       452/554
(81 %)
22 diff
(96.1 %id)
DA571209 whole embryo, mainly head .a 890 to 1732 2 to 842   capped   841/848
(99 %)
7 diff
(99.2 %id)
TI_2194644273   .a 936 to 2049 7 to 1114       1108/1287
(86 %)
17 diff
(98.7 %id)
TI_2194643156   .a 956 to 1367 32 to 445       418/448
(93 %)
17 diff
(96.3 %id)
TI_2194642848   .a 1047 to 1673 13 to 639       627/647
(96 %)
12 diff
(98.2 %id)
DA606043   .a 1139 to 1624 2 to 488   capped   487/487
(100 %)
2 diff
(99.6 %id)
BX481947   .a 1143 to 1758 1 to 620       618/620
(99 %)
4 diff
(99.4 %id)
DA160402 amygdala .a 1213 to 1796 2 to 585   capped   584/584
(100 %)
2 diff
(99.7 %id)
TI_2194642853   .a 1285 to 1931 1 to 645       645/645
(100 %)
8 diff
(98.8 %id)
DA707309   .a 1358 to 1884 2 to 529   capped   528/528
(100 %)
3 diff
(99.5 %id)
BG749529 eye, normal pigmented retinal epithelium .a 1396 to 2284 1 to 911       801/911
(87 %)
16 diff
(98.3 %id)
DA198061 brain .a 1509 to 1805 267 to 563   capped   300/562
(53 %)
7 diff
(98.8 %id)
TI_2194643163   .a 1511 to 2397 43 to 932       890/932
(95 %)
17 diff
(98.2 %id)
BF961509 nervous_normal .a 1545 to 1815 13 to 283       271/283
(95 %)
7 diff
(97.6 %id)
BG827178 muscle, rhabdomyosarcoma .a 1548 to 2385 1 to 841       839/844
(99 %)
13 diff
(98.5 %id)
BQ638381 eye, retina .a 1558 to 2166 1 to 609       609/609
(100 %)
0 diff
(100 %id)
DA170169 amygdala .a 1559 to 2126 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BE293936 muscle, rhabdomyosarcoma .a 1569 to 2262 1 to 683       683/686
(99 %)
14 diff
(98.0 %id)
DW413961 Liver .a 1579 to 1887 10 to 318       309/318
(97 %)
10 diff
(96.9 %id)
DA176887 amygdala .a 1599 to 2156 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
BX951868   .a 1604 to 2272 1 to 669       669/669
(100 %)
0 diff
(100 %id)
EH336873   .a 1604 to 1669 1 to 66       66/66
(100 %)
0 diff
(100 %id)
DA290954 hippocampus .a 1659 to 2236 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
TI_2194644276   .a 1673 to 2888 9 to 1222       1215/1330
(91 %)
31 diff
(97.7 %id)
TI_2194643164   .a 1674 to 2347 12 to 687       675/687
(98 %)
12 diff
(98.3 %id)
BC073854 Bone, osteosarcoma .a 1693 to 3174 1 to 1482   available from MGC, AAA   1482/1482
(100 %)
1 diff
(100.0 %id)
BG113243 Bone, osteosarcoma, cell line .a 1694 to 2322 1 to 638   available from MGC,   638/950
(67 %)
13 diff
(98.7 %id)
BM761042 lymph node, stomach .a 1715 to 2293 1 to 579       579/579
(100 %)
0 diff
(100 %id)
AW372365 breast .a 1727 to 2041 313 to 1       313/313
(100 %)
4 diff
(98.8 %id)
BM834183 stomach .a 1742 to 2330 1 to 589       589/589
(100 %)
0 diff
(100 %id)
TI_1948230926   .a 1759 to 2653 118 to 1008       891/1345
(66 %)
35 diff
(97.4 %id)
TI_1948230927   .a 1759 to 2770 120 to 1138       1019/1266
(80 %)
37 diff
(97.1 %id)
TI_1948231174   .a 1759 to 2639 117 to 995       879/1398
(62 %)
26 diff
(98.2 %id)
TI_1948231175   .a 1759 to 2801 116 to 1163       1048/1228
(85 %)
37 diff
(97.0 %id)
TI_1948231421   .a 1759 to 2762 114 to 1123       1010/1460
(69 %)
48 diff
(96.8 %id)
TI_1948231422   .a 1759 to 2765 113 to 1118       1006/1213
(82 %)
22 diff
(98.2 %id)
TI_1948231671   .a 1759 to 2524 115 to 881       767/1507
(50 %)
22 diff
(98.6 %id)
TI_1948231672   .a 1759 to 2654 113 to 1003       891/1196
(74 %)
18 diff
(98.5 %id)
EL737080 mixed .a 1769 to 2403 1 to 635       635/635
(100 %)
0 diff
(100 %id)
BE271898 adenocarcinoma cell line, ovary .a 1815 to 2386 1 to 572       572/572
(100 %)
0 diff
(100 %id)
TI_2194642857   .a 1828 to 2217 55 to 444       390/444
(87 %)
10 diff
(97.8 %id)
F00113 leg muscle, skeletal muscle .a 1835 to 2060 227 to 2       226/227
(99 %)
0 diff
(100 %id)
BX282723 leiomyosarcoma, uterus .a 1849 to 2357 1 to 509       509/509
(100 %)
0 diff
(100 %id)
BM460621 leiomyosarcoma, uterus .a 1849 to 2763 1 to 927       927/1089
(85 %)
25 diff
(97.8 %id)
AA424108   .a 1860 to 2355 1 to 495       495/497
(99 %)
2 diff
(99.6 %id)
W25938 eye, retina .a 1869 to 2298 15 to 449       435/465
(93 %)
13 diff
(97.3 %id)
BI038203 nervous_tumor .a 1902 to 2320 420 to 2       419/420
(99 %)
0 diff
(100 %id)
AI950409 pooled germ cell tumors .a 1910 to 2605 705 to 10       696/705
(98 %)
9 diff
(98.8 %id)
BU149361 epidermoid carcinoma, cell line, lung .a 1919 to 2654 1 to 737       737/916
(80 %)
8 diff
(99.2 %id)
DA529604 brain .a 1932 to 2532 2 to 602   capped   601/601
(100 %)
0 diff
(100 %id)
DA156167 amygdala .a 1942 to 2508 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
BQ891600 carcinoma, cell line, Prostate .a 1951 to 2848 1 to 900       900/900
(100 %)
11 diff
(98.8 %id)
BU543131 carcinoma, cell line, Prostate .a 1951 to 2742 1 to 802       802/946
(84 %)
22 diff
(97.7 %id)
BM007457 Spleen .a 1952 to 2630 1 to 684       684/684
(100 %)
20 diff
(97.1 %id)
TI_59382615   .a 1953 to 2630 101 to 783       683/683
(100 %)
19 diff
(97.3 %id)
BF435564 sciatic nerve .a 1955 to 2599 654 to 11   AAA   644/644
(100 %)
8 diff
(98.8 %id)
CN366208 embryonic stem cells, cell lines H1, H7, andH9 .a 1988 to 2760 13 to 786       774/786
(98 %)
8 diff
(99.0 %id)
W70049 heart .a 1994 to 2246 1 to 253   fully sequenced,   253/253
(100 %)
0 diff
(100 %id)
CD244481 testis .a 2014 to 2866 1 to 859       859/860
(99 %)
9 diff
(99.0 %id)
N56481   .a 2022 to 2139 1 to 118       118/187
(63 %)
3 diff
(98.4 %id)
BE046416 colon, juvenile granulosa tumor .a 2039 to 2601 563 to 1       563/569
(98 %)
4 diff
(99.3 %id)
DB358041 whole embryo, mainly head .a 2049 to 2599 546 to 1       546/556
(98 %)
12 diff
(97.9 %id)
TI_1948231176   .a 2068 to 3081 1132 to 130       1003/1370
(73 %)
41 diff
(97.1 %id)
CN366212 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2072 to 2806 12 to 745       734/745
(98 %)
7 diff
(99.1 %id)
TI_1971559965   .a 2081 to 3211 1 to 1127       1127/1128
(99 %)
41 diff
(96.4 %id)
TI_2194642854   .a 2093 to 2727 13 to 646       634/646
(98 %)
12 diff
(98.2 %id)
TI_2194644280   .a 2107 to 3257 8 to 1144       1137/1262
(90 %)
24 diff
(98.1 %id)
BP384719 pancreatic islet .a 2112 to 2611 500 to 1       500/500
(100 %)
0 diff
(100 %id)
DB347742 ovary, tumor tissue .a 2115 to 2599 486 to 1       486/497
(97 %)
1 diff
(99.8 %id)
TI_2194643161   .a 2116 to 2743 22 to 650       627/650
(96 %)
12 diff
(98.2 %id)
DA271433 caudate nucleus .a 2116 to 2672 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
AI619669 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 2120 to 2626 506 to 1       506/506
(100 %)
13 diff
(97.5 %id)
BU526972 epidermoid carcinoma, cell line, lung .a 2126 to 2985 1 to 870       870/941
(92 %)
17 diff
(98.2 %id)
CN366209 embryonic stem cells, DMSO-treated H9 cellline .a 2129 to 2859 1 to 732       732/732
(100 %)
3 diff
(99.6 %id)
CN366207 embryonic stem cells, DMSO-treated H9 cellline .a 2135 to 2598 7 to 470       468/470
(99 %)
6 diff
(98.8 %id)
CB049528 Prostate .a 2139 to 2698 13 to 572   fully sequenced,   561/573
(97 %)
7 diff
(98.8 %id)
TI_1948231423   .a 2144 to 3081 1065 to 130       936/1414
(66 %)
32 diff
(97.8 %id)
DT218589 brain .a 2159 to 2801 1 to 643       643/643
(100 %)
0 diff
(100 %id)
BE562818 endometrium, adenocarcinoma cell line, uterus .a 2183 to 2888 1 to 692       690/891
(77 %)
27 diff
(97.0 %id)
W70050 heart .a 2216 to 2522 308 to 1   fully sequenced,   308/308
(100 %)
0 diff
(100 %id)
CF552102 Pooled muscle (cardiac and skeletal) .a 2221 to 3066 1 to 853       853/860
(99 %)
10 diff
(98.9 %id)
AA962427 carcinoid, lung .a 2283 to 2673 1 to 389     Submitted on the opposite strand 389/389
(100 %)
2 diff
(99.5 %id)
AA996189 carcinoid, lung .a 2283 to 2653 1 to 371     Submitted on the opposite strand 371/371
(100 %)
0 diff
(100 %id)
BM015756 breast, mammary adenocarcinoma, cell line .a 2303 to 2765 1 to 470       470/780
(60 %)
10 diff
(98.8 %id)
TI_59394023   .a 2303 to 2765 94 to 563       470/780
(60 %)
10 diff
(98.8 %id)
TI_1948230928   .a 2319 to 3081 791 to 23       769/1189
(64 %)
35 diff
(97.1 %id)
TI_1948231673   .a 2319 to 3081 893 to 130       764/1348
(56 %)
16 diff
(98.9 %id)
BI090363 cervix .a 2323 to 2976 1 to 662       662/662
(100 %)
15 diff
(97.8 %id)
DA704130   .a 2341 to 2806 2 to 467   capped   466/466
(100 %)
0 diff
(100 %id)
DA281822 corpus callosum .a 2344 to 2872 2 to 530   capped   529/529
(100 %)
1 diff
(99.9 %id)
BM703506 eye, human retina .a 2345 to 2916 1 to 572   fully sequenced,   572/572
(100 %)
0 diff
(100 %id)
CA407399 adipose .a 2351 to 2620 1 to 271       271/272
(99 %)
28 diff
(89.8 %id)
BF694791 muscle (skeletal) .a 2378 to 2970 1 to 595       595/595
(100 %)
3 diff
(99.5 %id)
CF552955 Pooled muscle (cardiac and skeletal) .a 2431 to 3238 37 to 852       816/872
(93 %)
18 diff
(98.0 %id)
BM795512 stomach .a 2431 to 2863 8 to 440       433/440
(98 %)
2 diff
(99.6 %id)
BM703337 eye, human retina .a 2469 to 2926 1 to 458       458/458
(100 %)
0 diff
(100 %id)
DA140065 alzheimer cortex .a 2485 to 3041 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
CB118891 Liver .a 2502 to 3058 1 to 557       557/557
(100 %)
1 diff
(99.9 %id)
TI_151701330   .a 2522 to 3146 718 to 92       627/1258
(49 %)
4 diff
(99.7 %id)
H15330 whole brain .a 2557 to 3150 1 to 586       586/593
(98 %)
32 diff
(94.7 %id)
H24107 whole brain .a 2557 to 2989 1 to 437       437/502
(87 %)
10 diff
(98.1 %id)
DN601846 human embryonic stem cells .a 2563 to 3187 1 to 624       624/624
(100 %)
2 diff
(99.7 %id)
TI_2194644439   .a 2574 to 3760 1 to 1183       1183/1280
(92 %)
17 diff
(98.7 %id)
BE720609 head_neck .a 2594 to 2841 89 to 336       248/336
(73 %)
6 diff
(98.3 %id)
BI771741 pooled lung and spleen .a 2602 to 3318 1 to 727       727/964
(75 %)
25 diff
(97.5 %id)
TI_57182105   .a 2602 to 3318 37 to 763       727/1000
(72 %)
31 diff
(96.9 %id)
DT217213 brain .a 2608 to 3197 1 to 588       588/588
(100 %)
2 diff
(99.7 %id)
BM837990 Ascites, stomach .a 2609 to 3187 1 to 579       579/579
(100 %)
0 diff
(100 %id)
TI_149274956   .a 2614 to 3199 644 to 59       586/1058
(55 %)
0 diff
(100 %id)
BU676435 lung, Primary Lung Epithelial Cells .a 2614 to 3174 579 to 19   AAA   561/568
(98 %)
0 diff
(100 %id)
DA135961 alzheimer cortex .a 2617 to 3159 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DB308711.
matches multiple genes
hippocampus .a 2618 to 3174 558 to 1     also hits gene KCNH8 558/558
(100 %)
1 diff
(99.9 %id)
BM852981 Ascites, stomach .a 2639 to 3197 1 to 560       560/589
(95 %)
8 diff
(98.7 %id)
TI_2194643159   .a 2642 to 3391 1 to 755       755/761
(99 %)
20 diff
(97.4 %id)
TI_2194644292   .a 2642 to 3817 1 to 1165       1163/1285
(90 %)
24 diff
(98.2 %id)
W37166 lung .a 2646 to 2842 27 to 223   fully sequenced,   198/224
(88 %)
6 diff
(97.4 %id)
DB310317 substantia nigra .a 2651 to 3174 525 to 1       525/525
(100 %)
2 diff
(99.7 %id)
BG562607 Liver .a 2652 to 3239 1 to 585       585/585
(100 %)
7 diff
(98.9 %id)
DB324951   .a 2653 to 3174 523 to 1       523/523
(100 %)
1 diff
(99.9 %id)
AI803188 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2658 to 3174 517 to 1       517/517
(100 %)
1 diff
(99.9 %id)
CB049527 Prostate .a 2668 to 3174 527 to 23   fully sequenced, AAA   505/505
(100 %)
2 diff
(99.7 %id)
BF130357 hypernephroma, Kidney .a 2679 to 3289 1 to 599       599/853
(70 %)
24 diff
(97.2 %id)
BP419505 small intestine .a 2703 to 3174 1 to 471     Submitted on the opposite strand 471/471
(100 %)
1 diff
(99.8 %id)
TI_1971559973   .a 2705 to 3467 1 to 764       764/764
(100 %)
17 diff
(97.8 %id)
TI_2194642860   .a 2708 to 3431 1 to 727       727/727
(100 %)
16 diff
(97.8 %id)
AI420848 Prostate .a 2717 to 3174 458 to 1       458/458
(100 %)
0 diff
(100 %id)
AI191875 heart .a 2725 to 3174 450 to 1       450/450
(100 %)
0 diff
(100 %id)
AL598741   .a 2728 to 3029 1 to 302       302/309
(97 %)
1 diff
(99.7 %id)
AI962585 pooled germ cell tumors .a 2738 to 3175 438 to 1       438/438
(100 %)
1 diff
(99.8 %id)
Z21574   .a 2744 to 2896 1 to 148       148/171
(86 %)
15 diff
(91.3 %id)
AI018595 pooled .a 2752 to 3173 422 to 1       422/422
(100 %)
0 diff
(100 %id)
AA664137 lung .a 2755 to 3174 423 to 4       420/423
(99 %)
8 diff
(98.2 %id)
BC022293 Prostate, adenocarcinoma. .a 2756 to 4208 1 to 1452   available from MGC, AAA   1452/1452
(100 %)
3 diff
(99.8 %id)
BG778481 adenocarcinoma, Prostate .a 2756 to 3415 1 to 659   available from MGC,   659/659
(100 %)
8 diff
(98.8 %id)
AA424058   .a 2768 to 3177 410 to 1       410/410
(100 %)
0 diff
(100 %id)
N51477 multiple sclerosis lesions .a 2777 to 3158 1 to 385     Submitted on the opposite strand 385/457
(84 %)
3 diff
(99.4 %id)
N64837 multiple sclerosis lesions .a 2777 to 2953 1 to 177     Submitted on the opposite strand 177/177
(100 %)
0 diff
(100 %id)
AW265028 endometrioid ovarian metastasis, ovary .a 2781 to 3174 419 to 25   AAA   395/441
(89 %)
17 diff
(96.2 %id)
N53619 multiple sclerosis lesions .a 2790 to 3103 314 to 1     Submitted on the opposite strand 314/314
(100 %)
0 diff
(100 %id)
BF670779 muscle (skeletal) .a 2792 to 3454 1 to 651       651/867
(75 %)
24 diff
(97.3 %id)
TI_1971554145   .a 2793 to 3550 763 to 4       760/763
(99 %)
0 diff
(100 %id)
W19983 parathyroid gland, parathyroid tumor .a 2800 to 3358 1 to 568       566/570
(99 %)
24 diff
(95.8 %id)
BF509932   .a 2807 to 3174 385 to 18   AAA   368/368
(100 %)
0 diff
(100 %id)
N92251 lung .a 2812 to 3175 364 to 1   fully sequenced,   364/364
(100 %)
2 diff
(99.5 %id)
BM452914 melanotic melanoma, skin .a 2829 to 3710 1 to 895       895/940
(95 %)
17 diff
(98.2 %id)
CD519404 White Matter .a 2855 to 3238 1 to 389       389/966
(40 %)
14 diff
(98.6 %id)
BF212592 bone marrow, from chronic myelogenous leukemia .a 2860 to 3579 1 to 707       707/850
(83 %)
32 diff
(96.3 %id)
CA311818 Human Lung Epithelial cells, lung .a 2874 to 3705 849 to 19   AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 831/831
(100 %)
6 diff
(99.3 %id)
F08657 brain, total brain .a 2884 to 3254 1 to 370       370/370
(100 %)
1 diff
(99.8 %id)
BU729423 eye, human retina .a 2898 to 3174 295 to 19   fully sequenced, AAA   277/277
(100 %)
0 diff
(100 %id)
BC007004 Kidney, hypernephroma .a 2901 to 4212 1 to 1311   available from MGC, AAA   1311/1311
(100 %)
2 diff
(99.9 %id)
BF185818 brain, glioblastoma .a 2913 to 3637 1 to 722       722/733
(98 %)
30 diff
(96.0 %id)
BF130815 hypernephroma, Kidney .a 2920 to 3611 1 to 678   available from MGC,   678/876
(77 %)
29 diff
(96.7 %id)
FN177138 breast carcinoma .a 2941 to 3047 107 to 1     Submitted on the opposite strand 107/107
(100 %)
3 diff
(97.2 %id)
FN055806 breast carcinoma .a 2960 to 3017 58 to 1     Submitted on the opposite strand 58/59
(98 %)
0 diff
(100 %id)
D80054 brain .a 2975 to 3174 200 to 1       200/200
(100 %)
0 diff
(100 %id)
TI_1971559971   .a 3013 to 3913 1 to 897   AAA   897/916
(97 %)
12 diff
(98.7 %id)
TI_2194646313   .a 3020 to 4119 1155 to 64       1092/1200
(91 %)
0 diff
(100 %id)
H79080 melanocyte .a 3043 to 3435 1 to 396       396/426
(92 %)
8 diff
(98.2 %id)
TI_1971559487   .a 3082 to 4113 1085 to 74       1012/1280
(79 %)
0 diff
(100 %id)
CA503420 Human Lung Epithelial cells, lung .a 3134 to 3912 1 to 778     Submitted on the opposite strand 778/778
(100 %)
7 diff
(99.2 %id)
AA126090 colon, tumor .a 3136 to 3537 13 to 416       404/416
(97 %)
6 diff
(98.6 %id)
Z45178 brain, total brain .a 3144 to 3423 1 to 279       279/279
(100 %)
1 diff
(99.7 %id)
BM783873 stomach .a 3229 to 3879 1 to 651       651/651
(100 %)
0 diff
(100 %id)
EB386084 eye, optic nerve .a 3245 to 4052 1 to 808       808/808
(100 %)
3 diff
(99.7 %id)
TI_1971559969   .a 3341 to 4113 1 to 772       772/884
(87 %)
4 diff
(99.6 %id)
TI_149301521   .a 3341 to 4208 950 to 88   AAA   863/972
(88 %)
10 diff
(99.0 %id)
TI_149302550   .a 3341 to 4212 941 to 75   AAA   867/964
(89 %)
16 diff
(98.4 %id)
TI_2194644284   .a 3342 to 4119 1 to 778       778/1284
(60 %)
8 diff
(99.4 %id)
TI_2194642845   .a 3343 to 3981 1 to 641       641/641
(100 %)
9 diff
(98.6 %id)
CK004760 brain/CNS, Human Brain - Frontal Cortex .a 3344 to 3961 1 to 618       618/619
(99 %)
4 diff
(99.4 %id)
BM979955 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 3471 to 4208 756 to 19   AAA   738/738
(100 %)
0 diff
(100 %id)
W77824 heart .a 3477 to 3811 1 to 335   fully sequenced,   335/335
(100 %)
1 diff
(99.8 %id)
TI_1971554151   .a 3498 to 3972 478 to 4       475/478
(99 %)
0 diff
(100 %id)
BQ009149 Chondrosarcoma, Left Pubic Bone .a 3506 to 4208 720 to 19   AAA   702/702
(100 %)
3 diff
(99.6 %id)
CA423781 cell lines, Chondrosarcoma .a 3506 to 4208 720 to 19   AAA   702/702
(100 %)
4 diff
(99.5 %id)
DB560872 hypothalamus .a 3512 to 4212 1 to 700     Submitted on the opposite strand 700/700
(100 %)
5 diff
(99.3 %id)
AA456242 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3516 to 3992 7 to 483   fully sequenced,   477/483
(98 %)
5 diff
(99.0 %id)
BU619485 Cell Line, Chondrosarcoma .a 3516 to 4209 711 to 19   AAA   693/693
(100 %)
2 diff
(99.8 %id)
CA425827 cell lines, Chondrosarcoma .a 3517 to 4217 712 to 14   AAA   699/699
(100 %)
3 diff
(99.6 %id)
DB542978 hippocampus .a 3531 to 4207 1 to 674     Submitted on the opposite strand 674/676
(99 %)
7 diff
(99.0 %id)
BM980728 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 3532 to 4212 699 to 19   AAA   681/681
(100 %)
2 diff
(99.8 %id)
DB543897 hippocampus .a 3542 to 4212 1 to 673     Submitted on the opposite strand 673/673
(100 %)
4 diff
(99.5 %id)
BM803491 leiomyosarcoma, uterus .a 3548 to 4214 1 to 668       668/1140
(58 %)
7 diff
(99.4 %id)
CN366211 embryonic stem cells, DMSO-treated H9 cellline .a 3578 to 4208 1 to 631       631/631
(100 %)
1 diff
(99.9 %id)
BF221671 Prostate .a 3643 to 4208 566 to 1       566/566
(100 %)
0 diff
(100 %id)
N90410 parathyroid gland, parathyroid tumor .a 3655 to 4212 579 to 20   AAA   560/566
(98 %)
23 diff
(96.0 %id)
AI376435   .a 3666 to 4208 547 to 5       543/547
(99 %)
0 diff
(100 %id)
DB301168 alzheimer cortex .a 3668 to 4208 543 to 1       543/543
(100 %)
2 diff
(99.7 %id)
AI267685 brain, frontal lobe (see description) .a 3672 to 3924 29 to 281       253/281
(90 %)
6 diff
(97.9 %id)
N90823 multiple sclerosis lesions .a 3674 to 3991 1 to 310   fully sequenced,   310/310
(100 %)
2 diff
(99.4 %id)
AI807779 pooled .a 3683 to 4187 505 to 1       505/505
(100 %)
1 diff
(99.9 %id)
N77159 multiple sclerosis lesions .a 3687 to 3932 1 to 247   fully sequenced,   247/247
(100 %)
2 diff
(99.2 %id)
H11335 whole brain .a 3688 to 4216 534 to 2       533/550
(96 %)
0 diff
(100 %id)
DB543385 hippocampus .a 3735 to 4209 1 to 475     Submitted on the opposite strand 475/475
(100 %)
0 diff
(100 %id)
AI628982 Kidney .a 3736 to 4208 496 to 24   AAA   473/473
(100 %)
0 diff
(100 %id)
BF448503 fibrotheoma, ovary .a 3736 to 4216 484 to 2       483/484
(99 %)
0 diff
(100 %id)
DB539487 hippocampus .a 3741 to 4207 1 to 470     Submitted on the opposite strand 470/472
(99 %)
17 diff
(96.4 %id)
DB573281 hypothalamus .a 3741 to 4212 1 to 473     Submitted on the opposite strand 473/473
(100 %)
5 diff
(99.0 %id)
AI417043 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3742 to 4209 478 to 11   AAA   468/468
(100 %)
0 diff
(100 %id)
AI351097 pooled germ cell tumors .a 3743 to 4193 464 to 14       451/464
(97 %)
0 diff
(100 %id)
AI431667 adenocarcinoma, Pancreas .a 3746 to 4208 474 to 12   AAA   463/463
(100 %)
0 diff
(100 %id)
F27431 pectoral muscle (after mastectomy) .a 3747 to 4208 1 to 461       461/461
(100 %)
6 diff
(98.7 %id)
BE378420 endometrium, adenocarcinoma cell line, uterus .a 3749 to 4208 1 to 460       460/461
(99 %)
1 diff
(99.8 %id)
N35157 melanocyte .a 3750 to 4210 461 to 1       461/461
(100 %)
3 diff
(99.4 %id)
DB570936 hypothalamus .a 3752 to 4212 1 to 461     Submitted on the opposite strand 461/461
(100 %)
0 diff
(100 %id)
F37310 pectoral muscle (after mastectomy) .a 3752 to 4141 1 to 390       390/390
(100 %)
2 diff
(99.5 %id)
TI_2194643157   .a 3757 to 4119 1 to 364       364/926
(39 %)
9 diff
(99.1 %id)
CD106437 brain, Pituitary .a 3762 to 4209 1 to 448   AAA   448/448
(100 %)
0 diff
(100 %id)
DB566570 hypothalamus .a 3764 to 4212 1 to 450     Submitted on the opposite strand 450/450
(100 %)
1 diff
(99.8 %id)
R42256.
matches multiple genes
whole brain .a 3765 to 4216 459 to 2     also hits gene PPM1F 458/460
(99 %)
0 diff
(100 %id)
AI740866 pooled .a 3770 to 4208 457 to 19   AAA   439/439
(100 %)
0 diff
(100 %id)
AI275878 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3773 to 4208 443 to 8       436/443
(98 %)
0 diff
(100 %id)
AI078098   .a 3776 to 4208 446 to 14   AAA   433/433
(100 %)
0 diff
(100 %id)
W72188 heart .a 3781 to 4211 429 to 1   fully sequenced,   429/429
(100 %)
7 diff
(98.4 %id)
BF575622 muscle (skeletal) .a 3785 to 4209 1 to 422   AAA   422/422
(100 %)
4 diff
(99.1 %id)
AA125968 colon, tumor .a 3787 to 4209 441 to 11   AAA   431/432
(99 %)
8 diff
(98.2 %id)
N49094 multiple sclerosis lesions .a 3795 to 4212 420 to 2       419/420
(99 %)
0 diff
(100 %id)
DB531288 hippocampus .a 3797 to 4207 1 to 412     Submitted on the opposite strand 412/414
(99 %)
14 diff
(96.7 %id)
FN087643 breast carcinoma .a 3800 to 3906 1 to 105       105/105
(100 %)
2 diff
(98.1 %id)
AI302630 2 pooled tumors (clear cell type), Kidney .a 3807 to 4210 409 to 6       404/409
(98 %)
0 diff
(100 %id)
AI336750 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 3808 to 4209 402 to 1       402/402
(100 %)
0 diff
(100 %id)
AI037926   .a 3809 to 4209 417 to 17   AAA   401/401
(100 %)
2 diff
(99.6 %id)
BU941143 mixed (pool of 40 RNAs) .a 3825 to 4212 1 to 388       388/392
(98 %)
2 diff
(99.5 %id)
T63751 lung .a 3828 to 4169 1 to 352   fully sequenced,   352/352
(100 %)
19 diff
(94.7 %id)
CK005838 brain/CNS, Human Brain - Frontal Cortex .a 3832 to 4208 1 to 377   AAA   377/377
(100 %)
2 diff
(99.5 %id)
AI274488 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 3838 to 4210 383 to 11   AAA   373/373
(100 %)
3 diff
(99.2 %id)
H79081 melanocyte .a 3841 to 4198 361 to 1       361/366
(98 %)
5 diff
(98.7 %id)
BU165712 melanotic melanoma, skin .a 3861 to 4209 1 to 350   AAA   350/350
(100 %)
2 diff
(99.5 %id)
T17132   .a 3862 to 4208 345 to 1       345/345
(100 %)
2 diff
(99.5 %id)
AI310066 adenocarcinoma, colon .a 3872 to 4208 337 to 1       337/337
(100 %)
1 diff
(99.8 %id)
Z41636 brain, total brain .a 3890 to 4208 318 to 1       318/318
(100 %)
1 diff
(99.7 %id)
AA862904 Kidney .a 3892 to 4208 327 to 11   AAA   317/317
(100 %)
2 diff
(99.4 %id)
AI537740 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 3895 to 4209 315 to 1       315/315
(100 %)
0 diff
(100 %id)
N59348 multiple sclerosis lesions .a 3902 to 4208 304 to 1   fully sequenced,   304/304
(100 %)
7 diff
(97.7 %id)
AI808254 pooled .a 3904 to 4207 304 to 1       304/304
(100 %)
0 diff
(100 %id)
BQ029850 lung, Metastatic Chondrosarcoma .a 3904 to 4208 323 to 19   AAA   305/305
(100 %)
2 diff
(99.4 %id)
F04069 brain, total brain .a 3926 to 4208 284 to 1       284/284
(100 %)
1 diff
(99.7 %id)
FN114718 breast carcinoma .a 3940 to 4051 114 to 1     Submitted on the opposite strand 114/114
(100 %)
2 diff
(98.3 %id)
N64399 multiple sclerosis lesions .a 3961 to 4208 249 to 1   fully sequenced,   249/249
(100 %)
2 diff
(99.2 %id)
AA454631 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3962 to 4215 254 to 1   fully sequenced,   254/254
(100 %)
0 diff
(100 %id)
BF437582 Prostate .a 3989 to 4208 220 to 1       220/220
(100 %)
0 diff
(100 %id)
T63425 lung .a 3993 to 4176 183 to 1   fully sequenced,   183/183
(100 %)
4 diff
(97.9 %id)
FN093751 breast carcinoma .a 4010 to 4121 108 to 1     Submitted on the opposite strand 108/109
(99 %)
4 diff
(96.4 %id)
AI267667 brain, frontal lobe (see description) .a 4067 to 4216 190 to 41       150/190
(78 %)
5 diff
(97.4 %id)
FN130590 breast carcinoma .a 4073 to 4180 1 to 109       109/109
(100 %)
5 diff
(95.5 %id)
FN105337 breast carcinoma .a 4105 to 4205 103 to 5     Submitted on the opposite strand 99/103
(96 %)
0 diff
(100 %id)
FN138372 breast carcinoma .a 4117 to 4187 74 to 4     Submitted on the opposite strand 71/74
(95 %)
0 diff
(100 %id)
DC398995 testis .b 1 to 553 1 to 556   tiling clone,   556/556
(100 %)
4 diff
(99.3 %id)
DC395045 testis .b 4 to 553 1 to 550       550/550
(100 %)
0 diff
(100 %id)
DC396703 testis .b 4 to 575 1 to 572       572/573
(99 %)
1 diff
(99.9 %id)
AK301862 testis .b 14 to 1872 1 to 1859 exact tiling clone,   1859/1859
(100 %)
0 diff
(100 %id)
DC395726 testis .b 14 to 564 1 to 551       551/551
(100 %)
0 diff
(100 %id)
AL040446 testis .b 909 to 1695 1 to 790     Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 790/790
(100 %)
11 diff
(98.7 %id)
AL040447 testis .b 2795 to 3525 754 to 24   tiling clone, AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 731/731
(100 %)
0 diff
(100 %id)
AF274714   .c 1 to 3313 1 to 3313   tiling clone, AAA   3313/3313
(100 %)
0 diff
(100 %id)
NM_018030.3   .c 1 to 3313 1 to 3312   RefSeq, AAA   3312/3312
(100 %)
1 diff
(100.0 %id)
BQ070465 brain, neuroblastoma, cell line .c 35 to 515 1 to 482       482/1192
(40 %)
13 diff
(99.0 %id)
DB474565 hippocampus .c 77 to 568 1 to 492       492/492
(100 %)
3 diff
(99.4 %id)
BI552473 brain, hippocampus .c 236 to 1008 1 to 796       796/890
(89 %)
43 diff
(95.2 %id)
BI549312 brain, hippocampus .c 263 to 931 2 to 677       676/852
(79 %)
17 diff
(98.1 %id)
TI_44167442   .c 263 to 931 81 to 756       676/931
(72 %)
17 diff
(98.2 %id)
BP275703 Kidney .c 263 to 687 1 to 425       425/582
(73 %)
18 diff
(97.0 %id)
BG709611 brain, hypothalamus .c 272 to 1054 1 to 780       780/799
(97 %)
49 diff
(93.9 %id)
DB636520 hippocampus .c 279 to 943 1 to 666       666/680
(97 %)
7 diff
(99.0 %id)
BF966234 brain, hippocampus .c 286 to 929 1 to 650       650/724
(89 %)
21 diff
(97.1 %id)
CN366206 embryonic stem cells, cell lines H1, H7, andH9 .c 296 to 978 1 to 683       683/683
(100 %)
1 diff
(99.9 %id)
BC063420 Pancreas, Spleen, adult pooled .c 315 to 3309 1 to 2995   available from MGC, AAA   2995/2995
(100 %)
2 diff
(100.0 %id)
BI521078 pooled pancreas and spleen .c 315 to 1000 1 to 699   available from MGC,   699/700
(99 %)
23 diff
(96.8 %id)
BI553026 brain, hippocampus .c 317 to 981 1 to 664       664/664
(100 %)
6 diff
(99.1 %id)
DB502072 hypothalamus .c 318 to 791 1 to 474       474/474
(100 %)
0 diff
(100 %id)
DA968811 stomach .c 319 to 862 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DB253010 uterus .c 319 to 894 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
BC098384 Brain, hippocampus .c 322 to 3310 1 to 2987   AAA   2987/2987
(100 %)
3 diff
(99.9 %id)
TI_44168993   .c 322 to 1011 88 to 777       690/777
(88 %)
10 diff
(98.8 %id)
TI_44170516   .c 322 to 981 92 to 750       659/750
(87 %)
6 diff
(99.2 %id)
BQ944517 epidermoid carcinoma, cell line, lung .c 327 to 931 1 to 611       611/1088
(56 %)
11 diff
(99.0 %id)
CA390933 eye, RPE/choroid .c 332 to 557 1 to 226       226/226
(100 %)
0 diff
(100 %id)
BM562751 astrocytoma grade IV, cell line, brain .c 341 to 1294 1 to 960       958/1021
(93 %)
13 diff
(98.8 %id)
AA774834 schizophrenic brain S-11 frontal lobe .c 355 to 696 48 to 388     Submitted on the opposite strand 341/388
(87 %)
7 diff
(98.2 %id)
AF392449   .c 380 to 3309 1 to 2930 P328S A331G     2930/2930
(100 %)
2 diff
(100.0 %id)
CN366205 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 382 to 1008 1 to 630       631/635
(99 %)
6 diff
(99.1 %id)
BI085369 astrocytoma grade IV, cell line, brain .c 391 to 934 1 to 541       541/1006
(53 %)
11 diff
(99.0 %id)
DA396059 thalamus .c 411 to 990 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA341672 substantia nigra .c 534 to 1122 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
BI596404 brain, hypothalamus .c 537 to 999 1 to 463       463/463
(100 %)
5 diff
(99.0 %id)
BI461311 testis .c 539 to 1238 1 to 697       697/704
(99 %)
8 diff
(98.9 %id)
TI_45209262   .c 542 to 999 93 to 550       458/550
(83 %)
7 diff
(98.8 %id)
DA526999 brain .c 543 to 1099 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB495510 hypothalamus .c 544 to 721 1 to 177       177/216
(81 %)
2 diff
(99.1 %id)
DA181458 amygdala .c 545 to 1122 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA344321 substantia nigra .c 545 to 1057 2 to 514   capped   513/513
(100 %)
1 diff
(99.9 %id)
DA394586 thalamus .c 545 to 1057 2 to 514   capped   513/513
(100 %)
0 diff
(100 %id)
DA421701 cervix .c 545 to 1101 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
AK314552 tongue .c 550 to 2183 1 to 1634 K279R     1634/1634
(100 %)
3 diff
(99.9 %id)
DA764346 tongue .c 551 to 1129 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DB636598 hypothalamus .c 552 to 1202 1 to 651       651/651
(100 %)
0 diff
(100 %id)
DB499798 hypothalamus .c 552 to 773 1 to 222       222/327
(67 %)
2 diff
(99.4 %id)
CD652899 Embryonic Stem cells .c 557 to 1303 12 to 753       742/759
(97 %)
11 diff
(98.6 %id)
BX503195 Liver .c 570 to 974 1 to 405       405/405
(100 %)
1 diff
(99.8 %id)
BI086157 astrocytoma grade IV, cell line, brain .c 1745 to 2202 482 to 24       459/706
(65 %)
2 diff
(99.8 %id)
DA520906 brain .d 135 to 700 2 to 567   tiling clone, capped   566/566
(100 %)
0 diff
(100 %id)
BI547635 brain, hippocampus .d 202 to 601 296 to 695       695/695
(100 %)
5 diff
(99.3 %id)
DB175847 kidney, tumor tissue .d 285 to 841 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
ES312520 frontal balding hair, skin .d 498 to 664 1 to 165       165/165
(100 %)
2 diff
(98.8 %id)
TI_59392974   .d 569 to 1203 45 to 678       638/638
(100 %)
1 diff
(99.9 %id)
BM014891 breast, mammary adenocarcinoma, cell line .d 571 to 1203 1 to 632   tiling clone,   636/636
(100 %)
1 diff
(99.9 %id)
DA533978 brain .e 315 to 842 33 to 560 exact tiling clone, capped Suspected internal deletion 559/559
(100 %)
0 diff
(100 %id)
BG334554 melanotic melanoma, skin .f 1 to 588 1 to 588 exact tiling clone,   588/590
(99 %)
2 diff
(99.7 %id)
DA791477 brain .g 1 to 520 2 to 521 exact tiling clone, capped   520/520
(100 %)
0 diff
(100 %id)
DA225010 brain .h 1 to 541 2 to 544   tiling clone, capped   543/543
(100 %)
6 diff
(98.9 %id)
DA140847 alzheimer cortex .h 43 to 677 2 to 636   tiling clone, capped   635/635
(100 %)
0 diff
(100 %id)
BC041563 Brain, neuroblastoma .i 1 to 1886 1 to 1886 G81R tiling clone, available from MGC, AAA   1886/1886
(100 %)
1 diff
(100.0 %id)
BQ070517 brain, neuroblastoma, cell line .i 2 to 880 1 to 903 G81R available from MGC,   903/1000
(90 %)
37 diff
(96.3 %id)
AI733778 lung, lung carcinoma .i 1103 to 1601 1 to 499       499/499
(100 %)
1 diff
(99.8 %id)
AA126691 lung, lung carcinoma .i 1104 to 1735 1 to 632       632/632
(100 %)
1 diff
(99.9 %id)
AI733742 lung, lung carcinoma .i 1254 to 1735 1 to 482       482/482
(100 %)
1 diff
(99.8 %id)
AA115825 lung, lung carcinoma .i 1255 to 1670 1 to 420       420/420
(100 %)
6 diff
(98.6 %id)
AW291426   .i 1331 to 1886 570 to 14   AAA   557/557
(100 %)
1 diff
(99.9 %id)
AA126583 lung, lung carcinoma .i 1355 to 1860 519 to 1       519/533
(97 %)
17 diff
(96.9 %id)
AI732465 lung, lung carcinoma .i 1389 to 1880 499 to 8       492/499
(98 %)
0 diff
(100 %id)
AI732420 lung, lung carcinoma .i 1411 to 1887 478 to 2       477/478
(99 %)
0 diff
(100 %id)
AA115826 lung, lung carcinoma .i 1556 to 1860 309 to 1       309/462
(66 %)
4 diff
(99.2 %id)
DB474170 hippocampus .j 1 to 684 1 to 691 Q9X P38X L64X N74Y L84S ... tiling clone,   691/691
(100 %)
10 diff
(98.6 %id)
AV722004 hypothalamus .k 1 to 582 1 to 581 exact tiling clone,   581/745
(77 %)
5 diff
(99.4 %id)
AV722087 hypothalamus .k 1 to 578 1 to 578 exact tiling clone,   578/642
(90 %)
2 diff
(99.7 %id)
BQ070589 brain, neuroblastoma, cell line .l 1 to 931 1 to 942 exact tiling clone,   942/1041
(90 %)
20 diff
(98.1 %id)
D81874 brain .l 608 to 867 1 to 261   tiling clone,   261/261
(100 %)
1 diff
(99.7 %id)
AI681919 carcinoid, lung .m 1 to 449 449 to 1   tiling clone,   449/449
(100 %)
1 diff
(99.8 %id)
DA693046   .m 361 to 853 2 to 494 exact tiling clone, capped   493/493
(100 %)
0 diff
(100 %id)
BI463876 testis .n 1 to 729 8 to 747   tiling clone,   721/747
(96 %)
20 diff
(97.4 %id)
BF336007 colon .n 516 to 833 10 to 335 S4T K8T V11* tiling clone,   333/335
(99 %)
13 diff
(96.2 %id)
DB520819.
matches multiple genes
testis .o-u 1 to 434 434 to 1     also hits gene CABYR 434/434
(100 %)
0 diff
(100 %id)
DB527603.
matches multiple genes
testis .o-u 1 to 445 445 to 1   tiling clone, also hits gene CABYR 445/445
(100 %)
0 diff
(100 %id)
AW901421 nervous_normal .o-u 217 to 525 5 to 313   tiling clone,   309/313
(98 %)
6 diff
(98.1 %id)
AW901412 nervous_normal .o-u 251 to 400 33 to 182       150/182
(82 %)
6 diff
(96.8 %id)
FN115186 breast carcinoma .o-u 319 to 410 1 to 90       90/91
(98 %)
4 diff
(95.7 %id)
BI014207 lung_tumor .o-u 396 to 786 29 to 418 F24S H25I C27V A28L S29P tiling clone,   390/418
(93 %)
6 diff
(98.6 %id)
CA439674 lung, Metastatic Chondrosarcoma .p-u 1 to 682 699 to 19 exact tiling clone, AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 681/681
(100 %)
4 diff
(99.5 %id)
AI908406 breast .p-u 51 to 589 543 to 6   tiling clone,   538/547
(98 %)
0 diff
(100 %id)
DB204690 trachea .q 1 to 588 2 to 589   tiling clone, capped   588/588
(100 %)
1 diff
(99.9 %id)
DA218552 brain .r-u 1 to 548 2 to 550 Y16* capped   549/549
(100 %)
2 diff
(99.7 %id)
DA336584 hippocampus .r-u 1 to 514 2 to 515 exact tiling clone, capped   514/517
(99 %)
1 diff
(99.9 %id)
DB088611 testis .r-u 4 to 506 2 to 504 R24M capped   503/504
(99 %)
2 diff
(99.7 %id)
DA280009 corpus callosum .r-u 20 to 584 2 to 569 E17* capped   568/568
(100 %)
3 diff
(99.5 %id)
DA286986 corpus callosum .r-u 20 to 588 2 to 570 Y16* tiling clone, capped   569/569
(100 %)
1 diff
(99.9 %id)
DA330923 hippocampus .r-u 20 to 582 2 to 564 exact capped   563/563
(100 %)
0 diff
(100 %id)
DA395488 thalamus .r-u 34 to 517 2 to 485 exact capped   484/486
(99 %)
2 diff
(99.6 %id)
DB039436 testis .s 1 to 584 2 to 585 exact tiling clone, capped   584/584
(100 %)
0 diff
(100 %id)
DB253062 uterus .t 1 to 579 2 to 581   tiling clone, capped   580/580
(100 %)
1 diff
(99.9 %id)
DA254951 caudate nucleus .u 1 to 560 2 to 561   tiling clone, capped   560/560
(100 %)
0 diff
(100 %id)
DA394485 thalamus .va 1 to 546 2 to 547 exact tiling clone, capped   546/546
(100 %)
0 diff
(100 %id)
AA876181 pooled germ cell tumors .vb-u 1 to 485 485 to 1 exact tiling clone,   485/485
(100 %)
3 diff
(99.4 %id)
BM669001 eye, Retina Foveal and Macular .vc-u 1 to 468 479 to 12 exact tiling clone, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 468/468
(100 %)
1 diff
(99.8 %id)
BG825829 muscle, rhabdomyosarcoma .vd 1 to 435 1 to 439 N38E C39L K40Q D41R G42W ... tiling clone,   439/448
(97 %)
6 diff
(98.7 %id)
AA729938 alveolar rhabdomyosarcoma .ve-u 1 to 302 8 to 308 R28I tiling clone,   308/308
(100 %)
5 diff
(98.4 %id)
AA587367 colon, colon tumor RER+ .vf-u 1 to 296 291 to 1 exact tiling clone,   291/291
(100 %)
9 diff
(97.0 %id)
BG979736 colon_normal .vg-u 1 to 244 9 to 252 S2F S5C K12X P14R C15A ... tiling clone,   244/255
(95 %)
6 diff
(97.7 %id)
BG979735 colon_normal .vg-u 9 to 236 1 to 226   tiling clone,   226/226
(100 %)
6 diff
(97.4 %id)
CN286726 embryonic stem cells, cell lines H1, H7, andH9 .vh-u 1 to 237 1 to 236 T4L Y5T R6G L7C L8Y ... tiling clone,   236/236
(100 %)
4 diff
(98.4 %id)
BY799588 eye Gene OSBPL1A, variant not shown              
DB535286 hippocampus Gene OSBPL1A, variant not shown         Submitted on the opposite strand    
CV574311 cornea, eye Gene OSBPL1A, variant not shown              
AF323726   Gene OSBPL1A, variant not shown         Suspected internal deletion, this clone was ignored    
BX647893 human fetal kidney Gene OSBPL1A, variant not shown       available from DKFZ, AAA This clone was ignored    
CD702384 normal nasopharynx Gene OSBPL1A, variant not shown              
EC559258 Prostate Gene OSBPL1A, variant not shown              
EC530833 Prostate Gene OSBPL1A, variant not shown              
D56010   Gene OSBPL1A, variant not shown              
AL134482 brain Gene OSBPL1A, variant not shown              
FN083011 breast carcinoma Gene OSBPL1A, variant not shown         Submitted on the opposite strand    
CN413688 embryonic stem cells, cell lines H1, H7, andH9 Gene OSBPL1A, variant not shown         This clone was ignored    
FN120731 breast carcinoma Gene OSBPL1A, variant not shown         Submitted on the opposite strand    
CN366210 embryonic stem cells, cell lines H1, H7, andH9 Gene OSBPL1A, variant not shown         This clone was ignored    
FN131953 breast carcinoma Gene OSBPL1A, variant not shown              
FN162874 breast carcinoma Gene OSBPL1A, variant not shown         Submitted on the opposite strand    
FN169957 breast carcinoma Gene OSBPL1A, variant not shown              
FN062489 breast carcinoma Gene OSBPL1A, variant not shown         Submitted on the opposite strand    
FN153281 breast carcinoma Gene OSBPL1A, variant not shown         Submitted on the opposite strand    
FN158430 breast carcinoma Gene OSBPL1A, variant not shown         Submitted on the opposite strand    
AU146119 whole embryo, mainly head Gene OSBPL1A, variant not shown       fully sequenced, Suspected internal deletion, this clone was ignored    
AU119897 whole embryo, mainly head Gene OSBPL1A, variant not shown       fully sequenced, capped Suspected internal deletion, this clone was ignored    
AK001079 whole embryo, mainly head Gene OSBPL1A, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
DW428769 Liver Gene OSBPL1A, variant not shown       AAA      
TI_2194642851   Gene OSBPL1A, variant not shown              
TI_2194644287   Gene OSBPL1A, variant not shown         Suspected internal deletion, this clone was ignored    
R24717 whole brain Gene OSBPL1A, variant not shown              
AA017150 eye, retina Gene OSBPL1A, variant not shown         This clone was ignored    
AA018331 eye, retina Gene OSBPL1A, variant not shown         This clone was ignored    
AA179135 muscle, skeletal muscle Gene OSBPL1A, variant not shown         This clone was ignored    
AA179136 muscle, skeletal muscle Gene OSBPL1A, variant not shown         This clone was ignored    
AI334388 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus Gene OSBPL1A, variant not shown         Submitted on the opposite strand    
AI267592 brain, frontal lobe (see description) Gene OSBPL1A, variant not shown              
BE727540 melanotic melanoma, skin Gene OSBPL1A, variant not shown         This clone was ignored    
BF026517 melanotic melanoma, skin Gene OSBPL1A, variant not shown         This clone was ignored    
BF670810 muscle (skeletal) Gene OSBPL1A, variant not shown              
BG476413 melanotic melanoma, skin Gene OSBPL1A, variant not shown         This clone was ignored    
BM043336 carcinoma, cell line, Prostate Gene OSBPL1A, variant not shown         Suspected internal deletion, this clone was ignored    
DB066342 testis Gene OSBPL1A, variant not shown       capped This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o-u, .p-u, .q, .r-u, .s, .t, .u, .va, .vb-u, .vc-u, .vd, .ve-u, .vf-u, .vg-u, .vh-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC