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Gene OPRL1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
63 supporting clones for gene OPRL1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_182647.1   .a 1 to 3359 1 to 3359 exact RefSeq,   3359/3359
(100 %)
1 diff
(100.0 %id)
AF285095   .a 39 to 419 1 to 381   tiling clone,   381/381
(100 %)
2 diff
(99.5 %id)
TI_57221556   .a 213 to 989 52 to 822       771/851
(90 %)
32 diff
(96.3 %id)
AF285094   .a 218 to 419 1 to 202       202/202
(100 %)
2 diff
(99.1 %id)
BM546464 brain, hippocampus .a 221 to 841 63 to 684       622/1383
(44 %)
15 diff
(99.0 %id)
X77130 brain stem .a 226 to 2198 1 to 1973   tiling clone,   1973/1973
(100 %)
2 diff
(99.9 %id)
BI757249 brain .a 229 to 1020 1 to 784       787/785
(100 %)
32 diff
(96.0 %id)
BI754749 brain .a 237 to 1021 1 to 784       784/785
(99 %)
6 diff
(99.3 %id)
TI_57217450   .a 237 to 1021 34 to 817       784/818
(95 %)
12 diff
(98.6 %id)
DR003477 fetal brain .a 253 to 991 1 to 738       738/738
(100 %)
7 diff
(99.1 %id)
BM543468 brain, hippocampus .a 255 to 1203 19 to 980       962/980
(98 %)
21 diff
(97.9 %id)
BI919235 brain .a 258 to 864 23 to 627       605/627
(96 %)
8 diff
(98.8 %id)
TI_57242444   .a 258 to 864 23 to 627       605/627
(96 %)
8 diff
(98.8 %id)
U30185   .a 286 to 2826 1 to 2534   tiling clone,   2534/2534
(100 %)
10 diff
(99.7 %id)
AF348323   .a 352 to 1730 1 to 1379       1379/1379
(100 %)
0 diff
(100 %id)
TI_1948123349   .a 399 to 1161 124 to 890   fully sequenced,   767/890
(86 %)
9 diff
(99.0 %id)
TI_1948123525   .a 399 to 1112 123 to 847   fully sequenced,   725/847
(85 %)
11 diff
(98.8 %id)
TI_1948123699   .a 399 to 1104 124 to 841   fully sequenced,   718/841
(85 %)
8 diff
(99.1 %id)
TI_1948123860   .a 399 to 1129 122 to 860   fully sequenced,   739/860
(85 %)
7 diff
(99.2 %id)
CO957761 mixed .a 400 to 964 1 to 564   fully sequenced,   564/564
(100 %)
4 diff
(99.3 %id)
CD246184 mixed .a 402 to 1092 8 to 703       696/866
(80 %)
21 diff
(97.6 %id)
AY268428 brain .a 403 to 1515 1 to 1113       1113/1113
(100 %)
0 diff
(100 %id)
CR542061   .a 403 to 1512 1 to 1110       1110/1110
(100 %)
1 diff
(100.0 %id)
CR542082   .a 403 to 1515 1 to 1113       1113/1113
(100 %)
1 diff
(100.0 %id)
CV030306 mixed .a 403 to 786 1 to 384       384/384
(100 %)
0 diff
(100 %id)
CO957759 mixed .a 934 to 1519 601 to 22   fully sequenced,   580/601
(96 %)
5 diff
(99.2 %id)
DA199102 brain .a 1017 to 1578 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
TI_1948123700   .a 1074 to 1521 566 to 119   fully sequenced,   448/566
(79 %)
5 diff
(99.2 %id)
TI_1948123526   .a 1082 to 1521 558 to 119   fully sequenced,   440/558
(78 %)
5 diff
(99.2 %id)
TI_1948123861   .a 1099 to 1521 544 to 122   fully sequenced,   423/544
(77 %)
5 diff
(99.1 %id)
BG025021 lymph, lymphoma, cell line .a 1131 to 1725 7 to 604       598/606
(98 %)
23 diff
(96.3 %id)
TI_1948123350   .a 1131 to 1521 511 to 121   fully sequenced,   391/511
(76 %)
5 diff
(99.1 %id)
DA071795 cerebellum .a 1153 to 1721 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
BG708187 brain, hypothalamus .a 1364 to 2020 1 to 659       659/821
(80 %)
29 diff
(96.5 %id)
BI596764 brain, hypothalamus .a 1364 to 2154 1 to 793       793/794
(99 %)
18 diff
(97.8 %id)
TI_45208749   .a 1368 to 2154 88 to 876       789/877
(89 %)
15 diff
(98.3 %id)
DB492065 hypothalamus .a 1369 to 1751 1 to 383       383/386
(99 %)
2 diff
(99.5 %id)
DA088660 cerebellum .a 1379 to 1942 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA059827 cerebellum .a 1458 to 2017 2 to 561   tiling clone, capped   560/560
(100 %)
0 diff
(100 %id)
TI_57170210   .b 1 to 733 29 to 762       734/762
(96 %)
12 diff
(98.5 %id)
BC038433 Brain, adult medulla .b 8 to 3374 1 to 3367 exact tiling clone, available from MGC, AAA   3367/3367
(100 %)
4 diff
(99.9 %id)
BI825163 brain, medulla .b 8 to 733 1 to 727       727/727
(100 %)
9 diff
(98.8 %id)
DA357003 subthalamic nucleus .b 1551 to 2125 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
AL551175 placenta, Placenta Cot 25-normalized .b 1658 to 2531 1 to 873   fully sequenced,   873/873
(100 %)
6 diff
(99.4 %id)
CR604892 Placenta Cot 25-normalized .b 1660 to 3343 1 to 1684   tiling clone,   1684/1684
(100 %)
0 diff
(100 %id)
DT220236 brain .b 1663 to 2275 1 to 613       613/613
(100 %)
2 diff
(99.7 %id)
R17579 whole brain .b 1949 to 2380 1 to 438       438/438
(100 %)
15 diff
(96.6 %id)
AL574931 placenta, Placenta Cot 25-normalized .b 2501 to 3343 841 to 1   fully sequenced,   841/841
(100 %)
8 diff
(99.1 %id)
AA827495 Kidney, kidney tumor .b 2872 to 3358 486 to 1       486/486
(100 %)
2 diff
(99.6 %id)
W32703 heart .b 2882 to 3332 1 to 468       468/470
(99 %)
18 diff
(96.2 %id)
CB048300 Prostate .b 2888 to 3374 14 to 500   fully sequenced, AAA   487/500
(97 %)
6 diff
(98.8 %id)
BX093617 whole brain .b 2934 to 3365 446 to 15   AAA   432/432
(100 %)
0 diff
(100 %id)
DB562997 hypothalamus .b 2958 to 3374 1 to 417     Submitted on the opposite strand 417/417
(100 %)
2 diff
(99.6 %id)
BF475606 sciatic nerve .b 2971 to 3365 408 to 15   AAA   394/394
(100 %)
6 diff
(98.5 %id)
AW451157   .b 2977 to 3374 415 to 18   AAA   398/398
(100 %)
1 diff
(99.8 %id)
AA889849 pooled .b 3100 to 3376 278 to 2       277/278
(99 %)
0 diff
(100 %id)
AW449865   .b 3101 to 3374 291 to 18   AAA   274/274
(100 %)
4 diff
(98.6 %id)
AI049744   .b 3170 to 3374 204 to 1       204/204
(100 %)
2 diff
(99.1 %id)
CB048299 Prostate .b 3299 to 3374 104 to 29   fully sequenced, AAA   76/76
(100 %)
2 diff
(97.4 %id)
AF285093   .c 1 to 320 2 to 321   tiling clone,   321/321
(100 %)
0 diff
(100 %id)
AK308203   .c 1 to 2213 2 to 830     Suspected internal deletion 830/830
(100 %)
2 diff
(99.8 %id)
DA910132   .c 1 to 1961 2 to 578   capped Suspected internal deletion 577/577
(100 %)
2 diff
(99.7 %id)
CN267465 embryonic stem cells, DMSO-treated H9 cellline .c 36 to 454 1 to 419       419/419
(100 %)
0 diff
(100 %id)
L40949 blood .c 53 to 1304 1 to 1252   tiling clone,   1252/1252
(100 %)
0 diff
(100 %id)
NM_000913.3   .c 53 to 3260 1 to 3208   RefSeq,   3208/3208
(100 %)
1 diff
(100.0 %id)
BI912199 leukocyte .c 76 to 724 28 to 701       674/850
(79 %)
30 diff
(96.5 %id)
TI_57237066   .c 76 to 724 28 to 701       674/850
(79 %)
30 diff
(96.5 %id)
AW373832 breast .c 111 to 764 1 to 652       652/654
(99 %)
13 diff
(98.1 %id)
AF126470   .d 1 to 1134 1 to 1134 exact tiling clone,   1134/1134
(100 %)
0 diff
(100 %id)
AF115266 brain .e 1 to 1177 1 to 1177 exact tiling clone,   1177/1177
(100 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI