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Gene OPN1MWTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
24 supporting clones for gene OPN1MW back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
TI_1968231111.
matches multiple genes
  .a 1 to 1140 43 to 1173 tiling clone, also hits gene OPN1MW2 1131/1232
(91 %)
22 diff
(98.3 %id)
BC140938.
matches multiple genes
Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .a 7 to 1248 1 to 1242 tiling clone, also hits gene OPN1MW2 1242/1242
(100 %)
2 diff
(99.9 %id)
NM_000513.2   .a 7 to 2004 1 to 1998 RefSeq,   1998/1998
(100 %)
0 diff
(100 %id)
BC143790.
matches multiple genes
Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .a 26 to 1210 1 to 1185 tiling clone, also hits gene OPN1MW2 1185/1185
(100 %)
4 diff
(99.7 %id)
BC171754.
matches multiple genes
Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .a 26 to 1210 1 to 1185   also hits gene OPN1MW2 1185/1185
(100 %)
4 diff
(99.7 %id)
BC171755.
matches multiple genes
Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .a 26 to 1210 1 to 1185   also hits gene OPN1MW2 1185/1185
(100 %)
4 diff
(99.7 %id)
TI_2194628929.
matches multiple genes
  .a 28 to 1168 52 to 1181   also hits gene OPN1MW2 1132/1269
(89 %)
23 diff
(98.2 %id)
TI_2194629994.
matches multiple genes
  .a 28 to 1143 49 to 1159   also hits gene OPN1MW2 1111/1252
(88 %)
25 diff
(98.1 %id)
TI_2194628931.
matches multiple genes
  .a 28 to 1190 51 to 1199   also hits gene OPN1MW2 1149/1278
(89 %)
33 diff
(97.5 %id)
TI_2194629995.
matches multiple genes
  .a 28 to 1198 42 to 1203   also hits gene OPN1MW2 1162/1267
(91 %)
30 diff
(97.7 %id)
TI_2194628933.
matches multiple genes
  .a 28 to 1192 51 to 1203   also hits gene OPN1MW2 1153/1290
(89 %)
32 diff
(97.6 %id)
TI_2194629996.
matches multiple genes
  .a 28 to 1140 43 to 1152   also hits gene OPN1MW2 1110/1265
(87 %)
23 diff
(98.2 %id)
DN693325.
matches multiple genes
mixed .a 29 to 732 1 to 700   also hits gene OPN1MW2 700/758
(92 %)
7 diff
(99.1 %id)
BQ639996.
matches multiple genes
eye, retina .a 86 to 714 1 to 629   also hits gene OPN1LW, OPN1MW2 629/629
(100 %)
6 diff
(99.1 %id)
TI_2194630002.
matches multiple genes
  .a 123 to 1218 1136 to 52   also hits gene OPN1MW2 1087/1232
(88 %)
15 diff
(98.8 %id)
TI_2194630004.
matches multiple genes
  .a 125 to 1217 1142 to 59   also hits gene OPN1MW2 1086/1234
(88 %)
10 diff
(99.2 %id)
TI_2194629308.
matches multiple genes
  .a 201 to 1218 1076 to 61   also hits gene OPN1MW2 1016/1258
(80 %)
6 diff
(99.6 %id)
TI_2194629312.
matches multiple genes
  .a 201 to 1217 1075 to 61   also hits gene OPN1MW2 1015/1272
(79 %)
5 diff
(99.7 %id)
TI_2194629310.
matches multiple genes
  .a 203 to 1212 1074 to 67 tiling clone, also hits gene OPN1MW2 1008/1259
(80 %)
6 diff
(99.6 %id)
TI_2194630003.
matches multiple genes
  .a 203 to 1212 1075 to 68   also hits gene OPN1MW2 1008/1253
(80 %)
5 diff
(99.7 %id)
BQ639708.
matches multiple genes
eye, retina .a 213 to 802 1 to 590   also hits gene OPN1LW, OPN1MW2 590/590
(100 %)
10 diff
(98.4 %id)
W28410.
matches multiple genes
eye, retina .a 503 to 1047 561 to 7   also hits gene OPN1MW2 555/597
(92 %)
12 diff
(98.0 %id)
BQ638605.
matches multiple genes
eye, retina .a 540 to 1159 1 to 620 tiling clone, also hits gene OPN1MW2 620/620
(100 %)
2 diff
(99.7 %id)
TI_1968231111.
matches multiple genes
  2.a 1 to 1140 43 to 1173 tiling clone, also hits gene OPN1MW2 1131/1232
(91 %)
23 diff
(98.2 %id)
BC140938.
matches multiple genes
Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones 2.a 7 to 1248 1 to 1242 tiling clone, also hits gene OPN1MW2 1242/1242
(100 %)
3 diff
(99.8 %id)
BC143790.
matches multiple genes
Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones 2.a 26 to 1210 1 to 1185 tiling clone, also hits gene OPN1MW2 1185/1185
(100 %)
5 diff
(99.6 %id)
BC171754.
matches multiple genes
Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones 2.a 26 to 1210 1 to 1185   also hits gene OPN1MW2 1185/1185
(100 %)
5 diff
(99.6 %id)
BC171755.
matches multiple genes
Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones 2.a 26 to 1210 1 to 1185   also hits gene OPN1MW2 1185/1185
(100 %)
5 diff
(99.6 %id)
TI_2194628929.
matches multiple genes
  2.a 28 to 1168 52 to 1181   also hits gene OPN1MW2 1132/1269
(89 %)
23 diff
(98.2 %id)
TI_2194629994.
matches multiple genes
  2.a 28 to 1143 49 to 1159   also hits gene OPN1MW2 1111/1252
(88 %)
26 diff
(98.0 %id)
TI_2194628931.
matches multiple genes
  2.a 28 to 1190 51 to 1199   also hits gene OPN1MW2 1149/1278
(89 %)
34 diff
(97.4 %id)
TI_2194629995.
matches multiple genes
  2.a 28 to 1198 42 to 1203   also hits gene OPN1MW2 1162/1267
(91 %)
31 diff
(97.6 %id)
TI_2194628933.
matches multiple genes
  2.a 28 to 1192 51 to 1203   also hits gene OPN1MW2 1153/1290
(89 %)
33 diff
(97.5 %id)
TI_2194629996.
matches multiple genes
  2.a 28 to 1140 43 to 1152   also hits gene OPN1MW2 1110/1265
(87 %)
24 diff
(98.2 %id)
DN693325.
matches multiple genes
mixed 2.a 29 to 732 1 to 700   also hits gene OPN1MW2 700/758
(92 %)
7 diff
(99.1 %id)
BQ639996.
matches multiple genes
eye, retina 2.a 86 to 714 1 to 629   also hits gene OPN1LW, OPN1MW2 629/629
(100 %)
6 diff
(99.1 %id)
TI_2194630002.
matches multiple genes
  2.a 123 to 1218 1136 to 52   also hits gene OPN1MW2 1087/1232
(88 %)
16 diff
(98.8 %id)
TI_2194630004.
matches multiple genes
  2.a 125 to 1217 1142 to 59   also hits gene OPN1MW2 1086/1234
(88 %)
11 diff
(99.2 %id)
TI_2194629308.
matches multiple genes
  2.a 201 to 1218 1076 to 61   also hits gene OPN1MW2 1016/1258
(80 %)
7 diff
(99.5 %id)
TI_2194629312.
matches multiple genes
  2.a 201 to 1217 1075 to 61   also hits gene OPN1MW2 1015/1272
(79 %)
6 diff
(99.6 %id)
TI_2194629310.
matches multiple genes
  2.a 203 to 1212 1074 to 67 tiling clone, also hits gene OPN1MW2 1008/1259
(80 %)
7 diff
(99.5 %id)
TI_2194630003.
matches multiple genes
  2.a 203 to 1212 1075 to 68   also hits gene OPN1MW2 1008/1253
(80 %)
6 diff
(99.6 %id)
BQ639708.
matches multiple genes
eye, retina 2.a 213 to 802 1 to 590   also hits gene OPN1LW, OPN1MW2 590/590
(100 %)
10 diff
(98.4 %id)
W28410.
matches multiple genes
eye, retina 2.a 503 to 1047 561 to 7   also hits gene OPN1MW2 555/597
(92 %)
12 diff
(98.0 %id)
BQ638605.
matches multiple genes
eye, retina 2.a 540 to 1159 1 to 620 tiling clone, also hits gene OPN1MW2 620/620
(100 %)
1 diff
(99.9 %id)
BM695482.
matches multiple genes
eye, optic nerve Gene OPN1LW, variant not shown       also hits gene OPN1LW, OPN1MW2    
BM695482.
matches multiple genes
eye, optic nerve Gene OPN1MW2, variant not shown       also hits gene OPN1LW, OPN1MW2    
BM695482.
matches multiple genes
eye, optic nerve Gene OPN1MW, variant not shown       also hits gene OPN1LW, OPN1MW2    
BU728898.
matches multiple genes
eye, optic nerve Gene OPN1LW, variant not shown     AAA also hits gene OPN1LW, OPN1MW2    
BU728898.
matches multiple genes
eye, optic nerve Gene OPN1MW2, variant not shown     AAA also hits gene OPN1LW, OPN1MW2    
BU728898.
matches multiple genes
eye, optic nerve Gene OPN1MW, variant not shown     AAA also hits gene OPN1LW, OPN1MW2    
? Gene Summary Gene on genome mRNA Expression Tissue Function, regulation, related genes DC