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Gene OLFM2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
156 supporting clones for gene OLFM2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CR612883 fetal brain .a 1 to 1975 1 to 1975 exact tiling clone,   1975/1975
(100 %)
0 diff
(100 %id)
AL535795 brain, fetal brain .a 1 to 1030 1 to 1012   fully sequenced,   1012/1012
(100 %)
16 diff
(98.5 %id)
BX406452 fetal liver, Liver .a 12 to 1037 1 to 1018   fully sequenced, AAA   1018/1018
(100 %)
19 diff
(98.2 %id)
CR592581 fetal brain .a 33 to 1979 1 to 1947 exact     1947/1947
(100 %)
0 diff
(100 %id)
AL538120 brain, fetal brain .a 33 to 1028 1 to 989   fully sequenced,   989/989
(100 %)
17 diff
(98.3 %id)
BG704013 brain, hippocampus .a 38 to 683 1 to 650       648/650
(99 %)
17 diff
(97.4 %id)
BX405333 T cells (Jurkat cell line) .a 50 to 875 1 to 822       822/932
(88 %)
23 diff
(97.6 %id)
BM925963 brain .a 50 to 592 19 to 569       548/1176
(46 %)
29 diff
(97.6 %id)
BX418948 brain, fetal brain .a 52 to 1002 1 to 933       933/977
(95 %)
27 diff
(97.3 %id)
BX357942 Placenta Cot 25-normalized .a 52 to 994 1 to 941       941/941
(100 %)
9 diff
(99.1 %id)
DB502013 hypothalamus .a 55 to 248 1 to 194       194/253
(76 %)
1 diff
(99.7 %id)
BI917657 brain .a 57 to 767 7 to 712       706/733
(96 %)
21 diff
(97.2 %id)
TI_57243684   .a 57 to 767 33 to 738       706/759
(93 %)
21 diff
(97.3 %id)
CR597123 Neuroblastoma Cot 25-normalized .a 75 to 1996 1 to 1922 exact     1922/1922
(100 %)
0 diff
(100 %id)
AL523949 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 75 to 994 1 to 907   fully sequenced,   907/907
(100 %)
22 diff
(97.6 %id)
BI919212 brain .a 75 to 650 23 to 599       577/599
(96 %)
7 diff
(98.9 %id)
TI_57239362   .a 75 to 650 23 to 599       577/599
(96 %)
7 diff
(98.9 %id)
BM554133 brain, medulla .a 91 to 932 1 to 842       842/1009
(83 %)
10 diff
(99.1 %id)
CN311948 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 105 to 403 7 to 305       299/305
(98 %)
6 diff
(98.1 %id)
BI601833 brain, hypothalamus .a 112 to 761 6 to 659       654/660
(99 %)
15 diff
(97.8 %id)
TI_45210352   .a 112 to 761 87 to 740       654/741
(88 %)
15 diff
(98.0 %id)
BG708710 brain, hypothalamus .a 113 to 857 1 to 748       748/749
(99 %)
9 diff
(98.8 %id)
DB502173 hypothalamus .a 121 to 584 1 to 464       464/464
(100 %)
5 diff
(99.0 %id)
BQ067224 pooled brain, lung, testis .a 121 to 1018 23 to 935       911/1159
(78 %)
28 diff
(97.6 %id)
BM928290 brain .a 131 to 1051 1 to 933       933/1082
(86 %)
28 diff
(97.5 %id)
CN311944 embryonic stem cells, cell lines H1, H7, andH9 .a 135 to 738 1 to 604       604/604
(100 %)
2 diff
(99.7 %id)
M78361   .a 140 to 490 1 to 351       351/351
(100 %)
2 diff
(99.5 %id)
BX488577   .a 143 to 709 1 to 567       567/567
(100 %)
2 diff
(99.7 %id)
BX366810 Placenta Cot 25-normalized .a 154 to 1043 1 to 880   fully sequenced,   880/880
(100 %)
9 diff
(99.0 %id)
CR604836 Placenta Cot 25-normalized .a 155 to 2005 1 to 1851 exact     1851/1851
(100 %)
0 diff
(100 %id)
BC011361 Brain, glioblastoma with EGFR amplification .a 156 to 2018 1 to 1863 exact available from MGC, AAA   1863/1863
(100 %)
4 diff
(99.8 %id)
BF526894 brain, glioblastoma with EGFR amplification .a 157 to 882 1 to 724       724/814
(88 %)
15 diff
(98.2 %id)
BG761933 melanotic melanoma, high MDR (cell line), skin .a 157 to 946 1 to 789       789/789
(100 %)
11 diff
(98.7 %id)
NM_058164.2   .a 159 to 2018 1 to 1860 exact RefSeq, AAA   1860/1860
(100 %)
1 diff
(100.0 %id)
TI_57216997   .a 162 to 856 29 to 726       698/728
(95 %)
13 diff
(98.3 %id)
AF131839   .a 164 to 2013 1 to 1850 R106Q T127M AAA   1850/1850
(100 %)
3 diff
(99.9 %id)
DR002128 fetal brain .a 165 to 636 1 to 476       476/476
(100 %)
6 diff
(98.8 %id)
BI755781 brain .a 167 to 856 1 to 692       692/694
(99 %)
7 diff
(99.0 %id)
BM016762 astrocytoma grade IV, cell line, brain .a 176 to 908 1 to 743       743/894
(83 %)
27 diff
(97.0 %id)
TI_59386997   .a 177 to 908 98 to 839       742/893
(83 %)
26 diff
(97.1 %id)
BM914092 astrocytoma grade IV, cell line, brain .a 178 to 771 1 to 594       594/1170
(50 %)
23 diff
(98.1 %id)
TI_1948079116   .a 186 to 875 127 to 818       692/1169
(59 %)
22 diff
(98.2 %id)
TI_1948079117   .a 186 to 1077 124 to 1023       900/1424
(63 %)
30 diff
(97.9 %id)
TI_1948079459   .a 186 to 883 127 to 826       700/1126
(62 %)
29 diff
(97.5 %id)
TI_1948079460   .a 186 to 1166 128 to 1106       979/1383
(70 %)
50 diff
(96.4 %id)
TI_1948080162   .a 186 to 767 129 to 711       583/1148
(50 %)
14 diff
(98.8 %id)
TI_1948080163   .a 186 to 1148 122 to 1082       961/1359
(70 %)
34 diff
(97.5 %id)
CV025283 mixed .a 187 to 807 1 to 621       621/621
(100 %)
0 diff
(100 %id)
Z78387 brain .a 247 to 1429 27 to 1210       1186/1210
(98 %)
10 diff
(99.2 %id)
CR594920 fetal brain .a 247 to 1932 1 to 1686       1686/1686
(100 %)
0 diff
(100 %id)
CR606369 fetal brain .a 247 to 1973 1 to 1727       1727/1727
(100 %)
0 diff
(100 %id)
AL534605 brain, fetal brain .a 247 to 1170 1 to 914   fully sequenced,   914/914
(100 %)
7 diff
(99.3 %id)
AL536912 brain, fetal brain .a 247 to 1105 1 to 849   fully sequenced,   849/849
(100 %)
12 diff
(98.6 %id)
BX442512 brain, fetal brain .a 247 to 1160 1 to 924       924/928
(99 %)
30 diff
(96.8 %id)
AL552971 placenta, Placenta Cot 25-normalized .a 247 to 545 1 to 300       300/532
(56 %)
11 diff
(98.0 %id)
AA126164   .a 247 to 633 40 to 426       387/427
(90 %)
18 diff
(95.8 %id)
BI754021 brain .a 247 to 930 100 to 778       679/778
(87 %)
14 diff
(98.3 %id)
BI919227 brain .a 247 to 885 50 to 693       647/693
(93 %)
12 diff
(98.3 %id)
TI_57218900   .a 247 to 930 131 to 809       679/809
(83 %)
19 diff
(97.7 %id)
TI_57239403   .a 247 to 885 50 to 693       647/693
(93 %)
12 diff
(98.3 %id)
TI_1948079807   .a 247 to 766 188 to 708       521/1106
(47 %)
10 diff
(99.1 %id)
TI_1948079808   .a 247 to 1184 186 to 1128       943/1409
(66 %)
64 diff
(95.5 %id)
BM479224 duodenal adenocarcinoma, cell line, small intestine .a 274 to 1083 1 to 816       816/1115
(73 %)
22 diff
(98.1 %id)
BX374730 Neuroblastoma Cot 25-normalized .a 289 to 1083 30 to 815       786/833
(94 %)
58 diff
(93.1 %id)
BI758478 brain .a 377 to 1341 1 to 969       969/972
(99 %)
29 diff
(97.1 %id)
TI_57215431   .a 377 to 1341 1 to 969       969/972
(99 %)
29 diff
(97.1 %id)
BX335545 Placenta Cot 25-normalized .a 398 to 1085 398 to 1075       681/1075
(63 %)
22 diff
(98.0 %id)
ES309272 occipital hair of pubic hypotrichosispatient, skin .a 400 to 1028 32 to 659       628/743
(84 %)
13 diff
(98.3 %id)
R35832 whole brain .a 401 to 700 30 to 331       302/334
(90 %)
12 diff
(96.5 %id)
H22709 whole brain .a 401 to 759 43 to 403       361/406
(88 %)
16 diff
(96.1 %id)
BQ428091 melanotic melanoma, skin .a 422 to 1283 1 to 895       895/895
(100 %)
40 diff
(95.6 %id)
CR598222 Placenta Cot 25-normalized .a 426 to 1983 1 to 1558       1558/1558
(100 %)
0 diff
(100 %id)
AL554589 placenta, Placenta Cot 25-normalized .a 436 to 1041 10 to 613   fully sequenced,   604/613
(98 %)
8 diff
(98.7 %id)
BU541220 carcinoma, cell line, Prostate .a 468 to 1360 1 to 907       907/909
(99 %)
22 diff
(97.6 %id)
BU543515 carcinoma, cell line, Prostate .a 468 to 962 1 to 503       503/784
(64 %)
14 diff
(98.3 %id)
EC575490 Prostate .a 507 to 592 1 to 86       86/86
(100 %)
1 diff
(98.9 %id)
TI_1948079118   .a 544 to 1556 1125 to 121       1005/1310
(76 %)
44 diff
(96.7 %id)
TI_1948080164   .a 546 to 1556 1125 to 124       1002/1326
(75 %)
29 diff
(97.9 %id)
TI_1948079461   .a 553 to 1556 1116 to 122       995/1299
(76 %)
28 diff
(97.9 %id)
BE779963 eye, retinoblastoma .a 555 to 1401 1 to 834       834/872
(95 %)
36 diff
(95.9 %id)
BF345718 anaplastic oligodendroglioma with 1p/19qloss, brain .a 556 to 1304 1 to 753       753/1018
(73 %)
27 diff
(97.4 %id)
BF530912 anaplastic oligodendroglioma with 1p/19qloss, brain .a 556 to 1342 1 to 783       783/907
(86 %)
16 diff
(98.3 %id)
T51177 Liver .a 561 to 850 1 to 294       294/294
(100 %)
7 diff
(97.7 %id)
CU451441 epidermis .a 564 to 1354 1 to 791       791/795
(99 %)
11 diff
(98.7 %id)
TI_1948079809   .a 567 to 1556 1123 to 123       1001/1361
(73 %)
33 diff
(97.6 %id)
BG116373 duodenal adenocarcinoma, cell line, small intestine .a 584 to 1319 27 to 748       722/934
(77 %)
15 diff
(98.4 %id)
TI_1948079810   .a 669 to 1556 996 to 118       881/1144
(77 %)
27 diff
(97.7 %id)
AI902497 breast .a 679 to 759 1 to 81       81/81
(100 %)
0 diff
(100 %id)
CN311946 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 691 to 1431 8 to 748       741/748
(99 %)
6 diff
(99.2 %id)
BI011338 lung_normal .a 750 to 1210 461 to 1       461/465
(99 %)
1 diff
(99.8 %id)
TI_1948079119   .a 766 to 1556 903 to 118       786/1138
(69 %)
19 diff
(98.4 %id)
AI902502 breast .a 773 to 1100 1 to 331       331/331
(100 %)
12 diff
(96.4 %id)
TI_1948080165   .a 773 to 1556 894 to 119       776/1098
(70 %)
26 diff
(97.7 %id)
CU442853 epidermis .a 844 to 1538 697 to 2     Submitted on the opposite strand 696/697
(99 %)
0 diff
(100 %id)
CU443289 epidermis .a 844 to 1538 696 to 2     Submitted on the opposite strand 695/696
(99 %)
0 diff
(100 %id)
TI_1948079462   .a 873 to 1556 799 to 117       683/1115
(61 %)
0 diff
(100 %id)
AV723866 hypothalamus .a 874 to 1533 1 to 654       654/654
(100 %)
3 diff
(99.6 %id)
BQ300413 bladder_tumor .a 894 to 1318 438 to 15       424/438
(96 %)
0 diff
(100 %id)
BI045279 prostate_normal .a 897 to 1423 539 to 14       526/539
(97 %)
0 diff
(100 %id)
BF341903 brain, glioblastoma with EGFR amplification .a 908 to 1789 1 to 877       877/906
(96 %)
39 diff
(95.7 %id)
AA324877 brain, cerebellum .a 946 to 1228 1 to 284       284/284
(100 %)
1 diff
(99.7 %id)
AW962045   .a 947 to 1261 1 to 315       315/445
(70 %)
5 diff
(98.9 %id)
AL562289 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 964 to 1996 1025 to 1   fully sequenced,   1025/1025
(100 %)
42 diff
(96.0 %id)
CN311947 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 966 to 1602 24 to 660       637/660
(96 %)
6 diff
(99.1 %id)
BI914004 brain .a 984 to 1860 1 to 879       879/880
(99 %)
16 diff
(98.2 %id)
BI917371 brain .a 984 to 1828 1 to 847       847/867
(97 %)
23 diff
(97.4 %id)
TI_57240594   .a 984 to 1860 34 to 912       879/913
(96 %)
16 diff
(98.3 %id)
TI_57244661   .a 984 to 1828 27 to 873       847/893
(94 %)
23 diff
(97.5 %id)
T46893 Liver .a 995 to 1210 217 to 1       217/217
(100 %)
3 diff
(98.7 %id)
AL567150 brain, fetal brain .a 998 to 1979 1001 to 1   fully sequenced,   1001/1001
(100 %)
75 diff
(92.6 %id)
AL535794 brain, fetal brain .a 1000 to 1828 975 to 150   fully sequenced,   826/975
(84 %)
58 diff
(94.1 %id)
BX406451 fetal liver, Liver .a 1007 to 1973 965 to 1   fully sequenced,   965/965
(100 %)
49 diff
(95.0 %id)
AL577234 placenta, Placenta Cot 25-normalized .a 1011 to 1983 970 to 1   fully sequenced,   970/970
(100 %)
14 diff
(98.6 %id)
BX366809 Placenta Cot 25-normalized .a 1021 to 2005 977 to 1   fully sequenced,   977/977
(100 %)
17 diff
(98.3 %id)
BI016275 lung_tumor .a 1031 to 1364 33 to 352       320/373
(85 %)
26 diff
(93.1 %id)
BG912660 anaplastic oligodendroglioma with 1p/19qloss, brain .a 1059 to 1860 1 to 810       810/811
(99 %)
11 diff
(98.7 %id)
TI_154117524   .a 1079 to 2018 1028 to 98   AAA   931/999
(93 %)
31 diff
(96.9 %id)
BM450755 eye, retinoblastoma .a 1104 to 1737 1 to 642       642/1087
(59 %)
14 diff
(98.8 %id)
BE782969 eye, retinoblastoma .a 1105 to 1700 1 to 596       596/596
(100 %)
1 diff
(99.9 %id)
AV689688 hepatocellular carcinoma .a 1121 to 1527 1 to 405       405/406
(99 %)
2 diff
(99.6 %id)
AI834308 head_neck .a 1133 to 1302 1 to 170       170/170
(100 %)
0 diff
(100 %id)
CF455190 peripheral nervous system .a 1139 to 1867 1 to 730       730/884
(82 %)
32 diff
(96.4 %id)
AL565588 brain, fetal brain .a 1140 to 1963 823 to 10   fully sequenced,   814/823
(98 %)
13 diff
(98.5 %id)
CU453641 epidermis .a 1156 to 1854 2 to 700       699/716
(97 %)
6 diff
(99.2 %id)
BF529795 anaplastic oligodendroglioma with 1p/19qloss, brain .a 1169 to 1680 1 to 523       523/922
(56 %)
16 diff
(98.3 %id)
BI008591 kidney_tumor .a 1177 to 1666 40 to 536       497/536
(92 %)
9 diff
(98.4 %id)
CU455181 epidermis .a 1209 to 1854 662 to 17     Submitted on the opposite strand 646/665
(97 %)
0 diff
(100 %id)
BM926586 pooled lung and spleen .a 1265 to 2019 1 to 756       756/787
(96 %)
7 diff
(99.2 %id)
CA425768 cell lines, Chondrosarcoma .a 1364 to 2018 671 to 19   AAA   653/653
(100 %)
3 diff
(99.6 %id)
CA449689 Chondrosarcoma, Left Pelvis .a 1373 to 2018 663 to 19   AAA   645/645
(100 %)
2 diff
(99.7 %id)
BY797069 eye .a 1379 to 1978 1 to 601       601/601
(100 %)
4 diff
(99.4 %id)
BE742790 adenocarcinoma cell line, ovary .a 1398 to 1804 1 to 404       404/632
(63 %)
13 diff
(98.0 %id)
AL566560 brain, fetal brain .a 1405 to 1932 527 to 3   fully sequenced,   661/663
(99 %)
3 diff
(99.6 %id)
BM795615 stomach .a 1437 to 2011 1 to 575       575/575
(100 %)
1 diff
(99.9 %id)
BM690143 eye, human retina .a 1445 to 1888 9 to 452       444/452
(98 %)
1 diff
(99.8 %id)
BI037428 nervous_tumor .a 1471 to 1651 134 to 314       181/319
(56 %)
2 diff
(99.4 %id)
BM703188 eye, human retina .a 1478 to 2017 1 to 540   AAA   540/540
(100 %)
1 diff
(99.9 %id)
BX093474 whole brain .a 1482 to 2016 552 to 17       536/553
(96 %)
0 diff
(100 %id)
DB573220 hypothalamus .a 1528 to 2018 1 to 491     Submitted on the opposite strand 491/491
(100 %)
4 diff
(99.2 %id)
DB573377 hypothalamus .a 1541 to 2018 5 to 483     Submitted on the opposite strand 479/483
(99 %)
6 diff
(98.8 %id)
AA126059   .a 1562 to 2019 462 to 4   tiling clone,   459/462
(99 %)
0 diff
(100 %id)
H23989 whole brain .a 1616 to 2018 417 to 13   AAA   405/408
(99 %)
9 diff
(97.8 %id)
R88563 brain .a 1648 to 1983 337 to 2       336/339
(99 %)
0 diff
(100 %id)
R49542 whole brain .a 1689 to 2018 342 to 12   AAA   331/331
(100 %)
7 diff
(97.9 %id)
T04866   .a 1692 to 1871 180 to 1       180/180
(100 %)
0 diff
(100 %id)
CN277579 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1704 to 1879 1 to 176       176/176
(100 %)
0 diff
(100 %id)
AW517865 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 1713 to 2014 305 to 4       302/305
(99 %)
0 diff
(100 %id)
R40423 whole brain .a 1779 to 2017 251 to 13   AAA   239/239
(100 %)
0 diff
(100 %id)
BM662193 eye, human retina .a 1914 to 2018 123 to 19   AAA   105/105
(100 %)
1 diff
(99.1 %id)
AW273242 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 1915 to 2017 120 to 18   AAA   103/103
(100 %)
0 diff
(100 %id)
CR592038 thymus .b 1 to 1665 1 to 1665 exact tiling clone,   1665/1665
(100 %)
0 diff
(100 %id)
BX437233 thymus .b 1 to 797 1 to 797   fully sequenced,   797/797
(100 %)
2 diff
(99.8 %id)
BI907480 leukocyte .b 3 to 840 1 to 831       831/831
(100 %)
11 diff
(98.7 %id)
TI_57232468   .b 3 to 840 35 to 865       831/865
(96 %)
16 diff
(98.2 %id)
TI_57233017   .b 18 to 740 27 to 757       731/990
(73 %)
24 diff
(97.6 %id)
BI906592 leukocyte .b 24 to 740 1 to 725       725/958
(75 %)
19 diff
(98.1 %id)
BM918602 pooled pancreas and spleen .b 25 to 531 1 to 510       510/1373
(37 %)
13 diff
(99.1 %id)
BX437232 thymus .b 779 to 1665 887 to 1   fully sequenced,   887/887
(100 %)
3 diff
(99.7 %id)
BM804311 eye, retinoblastoma .c 1 to 649 1 to 654   tiling clone,   654/1380
(47 %)
14 diff
(99.0 %id)
BM558998 eye, retinoblastoma .c 20 to 866 1 to 869   tiling clone,   869/1104
(78 %)
49 diff
(95.6 %id)
BM451624 eye, retinoblastoma .c 21 to 649 1 to 640       640/1222
(52 %)
29 diff
(97.7 %id)
BU192695 eye, retinoblastoma .c 43 to 652 1 to 613       613/900
(68 %)
26 diff
(97.2 %id)
BU191724 eye, retinoblastoma .c 71 to 853 1 to 793       793/852
(93 %)
38 diff
(95.6 %id)
BE252295 eye, retinoblastoma .c 132 to 730 1 to 599   tiling clone,   599/599
(100 %)
4 diff
(99.4 %id)
BQ069013 brain, neuroblastoma, cell line .c 326 to 1142 1 to 826   tiling clone,   826/945
(87 %)
12 diff
(98.8 %id)
CN311945 embryonic stem cells, cell lines H1, H7, andH9 .d 1 to 572 25 to 595 Q4R N5T P6Q E7K E8R ... tiling clone,   577/595
(96 %)
6 diff
(99.0 %id)
TI_57164588   .e 1 to 714 28 to 742 exact tiling clone,   715/742
(96 %)
6 diff
(99.2 %id)
BI834112 pooled pancreas and spleen .e 2 to 714 1 to 714 exact tiling clone,   714/714
(100 %)
3 diff
(99.6 %id)
R88635 brain .f-u 1 to 257 1 to 258 exact tiling clone,   258/258
(100 %)
17 diff
(93.5 %id)
BM547970 brain, hippocampus Gene OLFM2, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI