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Gene OFCC1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
32 supporting clones for gene OFCC1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AF520802 placenta .a 1 to 303 162 to 464   tiling clone,   303/464
(65 %)
6 diff
(98.8 %id)
AF520807 placenta .a 273 to 1191 1 to 919 exact tiling clone,   919/919
(100 %)
0 diff
(100 %id)
AF548118 whole brain .a 370 to 634 1 to 265       265/416
(63 %)
0 diff
(100 %id)
AY309094 full term placenta .b 1 to 653 1 to 658   tiling clone,   656/658
(99 %)
5 diff
(99.3 %id)
AF520800 hippocampus .b 77 to 1034 1 to 958   tiling clone,   958/958
(100 %)
0 diff
(100 %id)
TI_1243019347   .b 137 to 886 45 to 794       750/1250
(60 %)
6 diff
(99.6 %id)
TI_1243019357   .b 137 to 886 811 to 62       750/1111
(67 %)
0 diff
(100 %id)
TI_1243023051   .b 137 to 886 51 to 800       750/1274
(58 %)
6 diff
(99.6 %id)
TI_1243023435   .b 137 to 886 814 to 65       750/1264
(59 %)
0 diff
(100 %id)
TI_1243020841   .b 137 to 885 131 to 879     Submitted on the opposite strand 749/1262
(59 %)
7 diff
(99.5 %id)
TI_1243021311   .b 137 to 885 132 to 880     Submitted on the opposite strand 749/1250
(59 %)
7 diff
(99.5 %id)
TI_1243023053   .b 137 to 885 799 to 51     Submitted on the opposite strand 749/1279
(58 %)
0 diff
(100 %id)
TI_1243023437   .b 137 to 885 64 to 812     Submitted on the opposite strand 749/1239
(60 %)
7 diff
(99.5 %id)
BC113541 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .b 138 to 879 1 to 742       742/742
(100 %)
0 diff
(100 %id)
BC113543 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .b 138 to 877 1 to 740       740/740
(100 %)
0 diff
(100 %id)
TI_2194628624   .c 1 to 773 808 to 36 exact   Submitted on the opposite strand 773/1304
(59 %)
5 diff
(99.7 %id)
TI_2194629003   .c 1 to 773 61 to 833 exact tiling clone, Submitted on the opposite strand 773/1284
(60 %)
11 diff
(99.2 %id)
TI_2194630327   .c 1 to 773 808 to 36 exact   Submitted on the opposite strand 773/1223
(63 %)
5 diff
(99.6 %id)
TI_2194630328   .c 1 to 764 60 to 823 exact tiling clone, Submitted on the opposite strand 764/1256
(60 %)
7 diff
(99.5 %id)
BC143837 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .c 2 to 755 1 to 754 exact     754/754
(100 %)
0 diff
(100 %id)
AF548113 pooled kidney .d 1 to 655 1 to 655 exact tiling clone,   655/655
(100 %)
0 diff
(100 %id)
AF520805 placenta .e 1 to 1526 1 to 1529 Q154P K155Q T156K I157T L159I ... tiling clone,   1529/1529
(100 %)
3 diff
(99.9 %id)
AF520808 placenta .f 1 to 708 1 to 708 exact tiling clone,   708/708
(100 %)
0 diff
(100 %id)
AF520804 placenta .g 1 to 559 1 to 559 exact tiling clone,   559/559
(100 %)
0 diff
(100 %id)
AF548116 pooled placenta from normal term .h 1 to 2198 3 to 2201 exact tiling clone,   2201/2201
(100 %)
1 diff
(100.0 %id)
AF548115 pooled whole fetus .h 85 to 1284 1 to 1201       1201/1201
(100 %)
1 diff
(100.0 %id)
AF548121 Spinal cord .h 151 to 456 55 to 368       321/443
(72 %)
9 diff
(98.0 %id)
AF520803 placenta .i 1 to 1222 1 to 1222 exact tiling clone,   1222/1222
(100 %)
1 diff
(100.0 %id)
AF548122 Spinal cord .i 40 to 502 1 to 537       498/537
(92 %)
13 diff
(97.6 %id)
AF520806 whole brain .j 1 to 973 1 to 976 exact tiling clone,   976/976
(100 %)
3 diff
(99.7 %id)
AF548117 brain Gene OFCC1, variant not shown         Suspected internal deletion, this clone was ignored    
AF548123 Spinal cord Gene OFCC1, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC