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Gene ODZ2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
133 supporting clones for gene ODZ2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_001122679.1   .a 1 to 9645 1 to 9645 exact RefSeq,   9645/9645
(100 %)
0 diff
(100 %id)
DR731293 pooled .a 99 to 260 162 to 1   tiling clone, Submitted on the opposite strand 162/162
(100 %)
0 diff
(100 %id)
DR731292 pooled .a 173 to 350 1 to 178   tiling clone,   178/178
(100 %)
0 diff
(100 %id)
DA778719 brain .a 494 to 1018 45 to 569   tiling clone, capped   525/568
(92 %)
6 diff
(99.0 %id)
BM017187 astrocytoma grade IV, cell line, brain .a 1034 to 1599 1 to 567   tiling clone,   567/1013
(55 %)
7 diff
(99.4 %id)
TI_59387436   .a 1035 to 1599 97 to 662       566/1012
(55 %)
6 diff
(99.5 %id)
AL710528 human skeletal muscle .a 1308 to 1547 8 to 247       240/247
(97 %)
6 diff
(97.6 %id)
BX953759   .a 1345 to 1994 1 to 651   tiling clone,   651/651
(100 %)
1 diff
(99.9 %id)
BE181706 head_neck .a 2512 to 2675 29 to 193   tiling clone,   165/193
(85 %)
7 diff
(96.4 %id)
BF359273 lung_tumor .a 2649 to 2869 244 to 23   tiling clone,   222/244
(90 %)
1 diff
(99.6 %id)
AL710250 human skeletal muscle .a 2895 to 3642 1 to 750   tiling clone,   750/750
(100 %)
3 diff
(99.6 %id)
AL699161 human skeletal muscle .a 2937 to 3465 1 to 529       529/529
(100 %)
1 diff
(99.9 %id)
DA697800   .a 3064 to 3639 2 to 577   capped   576/577
(99 %)
1 diff
(99.9 %id)
DA193119 amygdala .a 3418 to 3990 2 to 574   tiling clone, capped   573/573
(100 %)
1 diff
(99.9 %id)
DA503321 brain .a 3651 to 4223 2 to 574   tiling clone, capped   573/573
(100 %)
1 diff
(99.9 %id)
BX504880   .a 4053 to 4653 1 to 601       601/601
(100 %)
1 diff
(99.9 %id)
BX509644   .a 4099 to 4699 1 to 601   tiling clone,   601/601
(100 %)
2 diff
(99.7 %id)
AL710647 human skeletal muscle .a 4100 to 4702 1 to 602       602/602
(100 %)
4 diff
(99.4 %id)
DA797884 brain .a 4269 to 4811 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
CN357266 embryonic stem cells, cell lines H1, H7, andH9 .a 4360 to 4795 1 to 436       436/436
(100 %)
2 diff
(99.6 %id)
DA030840   .a 4376 to 4934 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA240973 brain .a 4388 to 4978 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
CV575450 cornea, eye .a 4388 to 4954 1 to 567       567/567
(100 %)
0 diff
(100 %id)
DA335483 hippocampus .a 4418 to 5013 2 to 597   capped   596/596
(100 %)
2 diff
(99.7 %id)
DA405636 thalamus .a 4424 to 4967 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA801311 brain .a 4513 to 5062 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA801341 brain .a 4513 to 5068 2 to 557   tiling clone, capped   556/556
(100 %)
0 diff
(100 %id)
DA778270 brain .a 4861 to 5430 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
CN357268 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 4995 to 5763 1 to 769   tiling clone,   769/774
(99 %)
6 diff
(99.3 %id)
DA795725 brain .a 5043 to 5349 2 to 308   capped   307/307
(100 %)
0 diff
(100 %id)
DA121462 cerebellum .a 5078 to 5617 2 to 542   capped   541/541
(100 %)
5 diff
(99.1 %id)
DA330936 hippocampus .a 5109 to 5612 2 to 505   capped   504/504
(100 %)
0 diff
(100 %id)
DA237185 brain .a 5178 to 5748 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA507796 brain .a 5453 to 6022 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA795987 brain .a 5458 to 5984 2 to 527   capped   526/526
(100 %)
1 diff
(99.9 %id)
DA444283 tongue, tumor tissue .a 5535 to 6105 2 to 572   tiling clone, capped   571/571
(100 %)
1 diff
(99.9 %id)
BM722033 eye, fetal eye .a 5729 to 6162 1 to 434     Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 434/434
(100 %)
0 diff
(100 %id)
BF984088 duodenal adenocarcinoma, cell line, small intestine .a 5737 to 6464 1 to 722       722/981
(73 %)
30 diff
(97.0 %id)
AL137500 amygdala .a 5748 to 8654 1 to 2907   tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (25/31 A in genome downstream of last aligned base) 2907/2907
(100 %)
1 diff
(100.0 %id)
DA171678 amygdala .a 5824 to 6328 2 to 507   capped   506/506
(100 %)
1 diff
(99.9 %id)
DA499174 brain .a 5832 to 6389 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
BG115621 duodenal adenocarcinoma, cell line, small intestine .a 5857 to 6511 1 to 651       651/945
(68 %)
11 diff
(98.9 %id)
DA024613   .a 5866 to 6442 2 to 578   tiling clone, capped   577/577
(100 %)
0 diff
(100 %id)
BE142323 head_neck .a 6124 to 6628 1 to 505       505/505
(100 %)
6 diff
(98.9 %id)
DA717479   .a 6293 to 6827 2 to 537   capped   536/536
(100 %)
2 diff
(99.7 %id)
DA051133   .a 6332 to 6913 2 to 584   capped   583/583
(100 %)
2 diff
(99.7 %id)
DA780388 brain .a 6338 to 6892 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DB049998 testis .a 6426 to 6972 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DA784380 brain .a 6432 to 7006 2 to 578   capped   577/578
(99 %)
3 diff
(99.5 %id)
AK302302 testis .a 6436 to 8447 1 to 2012       2012/2012
(100 %)
2 diff
(100.0 %id)
DC399210 testis .a 6436 to 6998 1 to 563       563/563
(100 %)
1 diff
(99.9 %id)
DB054957 testis .a 6437 to 6866 2 to 432   capped   431/431
(100 %)
3 diff
(99.4 %id)
DA267419 caudate nucleus .a 6439 to 6992 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA514510 brain .a 6479 to 7011 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
DB046151 testis .a 6488 to 7060 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
DA519974 brain .a 6489 to 7041 2 to 554   capped   553/554
(99 %)
1 diff
(99.9 %id)
DA307542 hippocampus .a 6514 to 7105 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
AW875419 pnet .a 6635 to 7225 17 to 605       589/605
(97 %)
7 diff
(98.9 %id)
AW875427 pnet .a 6653 to 7183 37 to 567       531/567
(93 %)
6 diff
(99.0 %id)
AW178509 head_neck .a 6832 to 7394 565 to 2       564/566
(99 %)
0 diff
(100 %id)
AW178510 head_neck .a 6921 to 7415 498 to 1       498/498
(100 %)
13 diff
(97.4 %id)
AW875579 pnet .a 6971 to 7499 555 to 27       529/555
(95 %)
1 diff
(99.9 %id)
DR759701 embryonic stem .a 6993 to 7813 1 to 821       821/821
(100 %)
0 diff
(100 %id)
AW875580 pnet .a 7065 to 7513 448 to 1       448/448
(100 %)
5 diff
(98.9 %id)
DA367099 subthalamic nucleus .a 7067 to 7632 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
AK293262   .a 7142 to 8603 1 to 1462       1462/1462
(100 %)
1 diff
(100.0 %id)
DC299570   .a 7142 to 7710 1 to 569       569/569
(100 %)
1 diff
(99.9 %id)
CV814086 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 7315 to 8115 1 to 804       804/885
(90 %)
21 diff
(97.7 %id)
DR762008 embryonic stem .a 7365 to 8191 1 to 827       827/827
(100 %)
5 diff
(99.4 %id)
R95485   .a 7421 to 7549 1 to 125       125/126
(99 %)
8 diff
(93.7 %id)
CF551862 Pooled muscle (cardiac and skeletal) .a 7600 to 8441 1 to 843       843/845
(99 %)
2 diff
(99.8 %id)
AA446367   .a 7663 to 8123 1 to 459       459/459
(100 %)
3 diff
(99.4 %id)
CD519996 White Matter .a 7691 to 8441 1 to 768       768/911
(84 %)
23 diff
(97.5 %id)
BM692288 eye, human retina .a 7750 to 8392 6 to 648       643/648
(99 %)
6 diff
(99.1 %id)
CN357269 embryonic stem cells, cell lines H1, H7, andH9 .a 7751 to 8240 1 to 490       490/490
(100 %)
3 diff
(99.4 %id)
CV573718 cornea, eye .a 7832 to 8444 1 to 613       613/613
(100 %)
0 diff
(100 %id)
Z45705 brain, total brain .a 7859 to 8117 1 to 260       260/260
(100 %)
1 diff
(99.7 %id)
CN357267 embryonic stem cells, cell lines H1, H7, andH9 .a 7951 to 8623 1 to 673       673/673
(100 %)
0 diff
(100 %id)
TI_151743343   .a 8038 to 8654 761 to 144   AAA Possibly primed on the genome, locally A rich (25/31 A in genome downstream of last aligned base) 618/972
(63 %)
45 diff
(95.4 %id)
EL954536 eyeball .a 8196 to 8634 1 to 439       439/439
(100 %)
8 diff
(98.2 %id)
CX865545 embryonic stem .a 8267 to 9041 12 to 786       775/786
(98 %)
6 diff
(99.3 %id)
AA334973   .a 8301 to 8654 355 to 1       355/355
(100 %)
4 diff
(98.9 %id)
BQ186172 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 8441 to 8915 1 to 475       475/475
(100 %)
1 diff
(99.8 %id)
ES310797 scalp interfollicular dermis, skin .a 8461 to 8774 1 to 314       314/314
(100 %)
5 diff
(98.5 %id)
CB047951 Prostate .a 8466 to 9072 10 to 616   fully sequenced, Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 607/616
(98 %)
1 diff
(99.9 %id)
AW139310   .a 8613 to 8969 374 to 18   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 357/367
(97 %)
1 diff
(99.8 %id)
BX091243 brain .a 8615 to 9357 1 to 745       745/747
(99 %)
8 diff
(99.0 %id)
BF950845 nervous_normal .a 8623 to 9017 23 to 415   tiling clone,   393/461
(85 %)
6 diff
(98.7 %id)
C03609 heart .a 8670 to 8945 1 to 277       277/277
(100 %)
2 diff
(99.3 %id)
C04250 heart .a 8670 to 8983 1 to 315       315/315
(100 %)
3 diff
(99.1 %id)
C05198 heart .a 8670 to 8922 1 to 253       253/259
(97 %)
5 diff
(98.1 %id)
C05620 heart .a 8670 to 8898 1 to 229       229/229
(100 %)
2 diff
(99.2 %id)
CA312904 Human Lung Epithelial cells, lung .a 8677 to 9450 792 to 19   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 774/774
(100 %)
3 diff
(99.7 %id)
BG678841 skin, squamous cell carcinoma .a 8714 to 9580 1 to 869       869/873
(99 %)
29 diff
(96.7 %id)
BI520500 brain, medulla .a 8727 to 8890 1 to 164   AAA Possibly primed on the genome, locally A rich (25/31 A in genome downstream of last aligned base) 164/164
(100 %)
0 diff
(100 %id)
BQ775757 Bone, Human Chondrosarcoma Cell Line .a 8748 to 9430 683 to 1       683/683
(100 %)
2 diff
(99.8 %id)
BU740396 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 8756 to 9425 682 to 13   AAA Possibly primed on the genome, locally A rich (13/14 A in genome downstream of last aligned base) 670/680
(98 %)
1 diff
(99.9 %id)
AI492934 Kidney .a 8826 to 9266 465 to 25   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 441/441
(100 %)
6 diff
(98.7 %id)
T07457   .a 8839 to 9204 1 to 373       373/377
(98 %)
8 diff
(97.9 %id)
BQ774476 Chondrosarcoma Grade II, Left Pelvis .a 8852 to 9430 579 to 1       579/579
(100 %)
2 diff
(99.7 %id)
AI859144 anaplastic oligodendroglioma, brain .a 8868 to 9412 546 to 1       546/546
(100 %)
3 diff
(99.5 %id)
AW069752 bone marrow stroma .a 8920 to 9430 511 to 1       511/511
(100 %)
2 diff
(99.7 %id)
H19880 brain .a 8921 to 9411 484 to 1       484/484
(100 %)
10 diff
(98.0 %id)
TI_149284495   .a 8927 to 9450 588 to 63   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 526/1137
(46 %)
14 diff
(98.8 %id)
AW615139 pooled germ cell tumors .a 8936 to 9412 479 to 1       479/479
(100 %)
3 diff
(99.4 %id)
TI_159723619   .a 8939 to 9450 593 to 82   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 512/1009
(50 %)
1 diff
(100.0 %id)
CA945150 Human Lung Epithelial cells, lung .a 8939 to 9450 530 to 19   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 512/579
(88 %)
1 diff
(99.9 %id)
BG114470 Bone, osteosarcoma, cell line .a 8959 to 9644 1 to 688       688/708
(97 %)
12 diff
(98.4 %id)
BM678544 eye, fetal eye .a 8959 to 9643 704 to 19   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 686/686
(100 %)
9 diff
(98.7 %id)
BQ774782 Bone, Human Chondrosarcoma Cell Line .a 8974 to 9644 689 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 671/674
(99 %)
0 diff
(100 %id)
BE184375 head_neck .a 8979 to 9383 417 to 12     Submitted on the opposite strand 406/436
(93 %)
0 diff
(100 %id)
CA429361 Cell Line, Chondrosarcoma .a 9009 to 9644 654 to 19   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 636/636
(100 %)
1 diff
(99.9 %id)
BE939125 testis_normal .a 9012 to 9365 358 to 4       355/382
(92 %)
0 diff
(100 %id)
CB047950 Prostate .a 9042 to 9644 627 to 24   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 604/604
(100 %)
2 diff
(99.7 %id)
D29453   .a 9051 to 9412 1 to 362       362/362
(100 %)
6 diff
(98.4 %id)
AW419319 carcinoid, lung .a 9115 to 9645 536 to 6       531/536
(99 %)
0 diff
(100 %id)
CA413921 Chondrosarcoma Grade II, Left Pelvis .a 9117 to 9430 317 to 1       317/317
(100 %)
1 diff
(99.7 %id)
M78386   .a 9142 to 9512 373 to 1       373/374
(99 %)
5 diff
(98.7 %id)
AI692521 carcinoid, lung .a 9189 to 9638 451 to 1       451/451
(100 %)
1 diff
(99.8 %id)
N71920 cochlea, ear .a 9490 to 9643 156 to 1       156/179
(87 %)
4 diff
(97.8 %id)
CR936703 endometrium carcinoma cell line .b 1 to 7993 1 to 7993 L7P P62L H240R T575A V1521A ... tiling clone, AAA   7993/7993
(100 %)
9 diff
(99.9 %id)
AL710634 human skeletal muscle .b 1544 to 1850 1 to 307   tiling clone,   307/314
(97 %)
3 diff
(99.1 %id)
AB032953 brain .c 1 to 7781 1 to 7781 L1754P tiling clone, available from KIAA,   7781/7781
(100 %)
5 diff
(100.0 %id)
AK056053   .d 1 to 1603 2 to 1604 exact tiling clone, available from FLJ,   1604/1727
(92 %)
1 diff
(100.0 %id)
DA685493   .d 1 to 535 2 to 537   capped   536/536
(100 %)
2 diff
(99.7 %id)
AL710285 human skeletal muscle .d 21 to 258 1 to 238   tiling clone,   238/304
(78 %)
2 diff
(99.4 %id)
DB322905   .d 1242 to 1603 485 to 124       362/492
(73 %)
2 diff
(99.6 %id)
DA072297 cerebellum .e 1 to 582 2 to 583 exact tiling clone, capped   582/582
(100 %)
0 diff
(100 %id)
TI_149299256   .f 1 to 681 744 to 63 D3L L4T N6A G7T N8X ... tiling clone, AAA   682/773
(88 %)
10 diff
(98.8 %id)
BU684934 lung, Primary Lung Cystic Fibrosis EpithelialCells .f 80 to 681 620 to 19   AAA   602/602
(100 %)
2 diff
(99.7 %id)
DA372300 thalamus .g 1 to 553 2 to 553 D44G tiling clone, capped   552/552
(100 %)
6 diff
(99.0 %id)
AL598057   .h 1 to 499 1 to 499 P78X tiling clone,   499/499
(100 %)
5 diff
(99.0 %id)
AI669183 Prostate .i 1 to 439 442 to 0 V2F N4T tiling clone,   441/456
(96 %)
3 diff
(99.4 %id)
DA566604 heart .j 1 to 568 2 to 569   tiling clone, capped   568/568
(100 %)
0 diff
(100 %id)
BX648178 human endometrium carcinoma cell line Gene ODZ2, variant not shown       available from DKFZ, AAA Suspected internal deletion, this clone was ignored    
CB048972 Prostate Gene ODZ2, variant not shown         Suspected internal deletion, this clone was ignored    
CB048973 Prostate Gene ODZ2, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C