To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene TTC29TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
144 supporting clones for gene TTC29 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK093145 testis .a 83 to 1788 125 to 1830 L265F tiling clone, available from FLJ,   1830/1830
(100 %)
1 diff
(100.0 %id)
AX747953   .a 83 to 1788 125 to 1830 L265F     1830/1830
(100 %)
1 diff
(100.0 %id)
DB024806 testis .a 83 to 494 125 to 536   capped   535/536
(99 %)
1 diff
(99.9 %id)
DB026138 testis .a 83 to 487 157 to 561   capped   560/561
(99 %)
2 diff
(99.7 %id)
DB037980 testis .a 83 to 529 126 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DB045341 testis .a 83 to 490 161 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB336399 testis .a 1255 to 1788 534 to 1       534/534
(100 %)
0 diff
(100 %id)
BG208860   .a 1567 to 2184 1 to 619   tiling clone,   619/624
(99 %)
8 diff
(98.8 %id)
BI827046 brain, medulla .b -9 to 722 1 to 732       732/733
(99 %)
4 diff
(99.5 %id)
TI_57173149   .b -9 to 722 36 to 767       732/768
(95 %)
10 diff
(98.7 %id)
DB026929 testis .b 1 to 565 3 to 567   tiling clone, capped   566/566
(100 %)
1 diff
(99.9 %id)
DB044073 testis .b 1 to 578 2 to 580   capped   577/579
(99 %)
4 diff
(99.4 %id)
DB059131 testis .b 1 to 546 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
BP368990 testis .b 23 to 593 1 to 570       570/570
(100 %)
1 diff
(99.9 %id)
CD300189 testis .b 30 to 880 1 to 850       850/852
(99 %)
2 diff
(99.8 %id)
CD558150 testis .b 31 to 726 18 to 715       698/824
(84 %)
13 diff
(98.5 %id)
AF345910 testis .b 83 to 1688 130 to 1739 H140Y A276T F467* tiling clone, AAA   1735/1739
(99 %)
3 diff
(99.9 %id)
AK301807 testis .b 83 to 1688 105 to 1710 L94P H140Y A276T tiling clone,   1710/1710
(100 %)
4 diff
(99.8 %id)
BC024193 testis .b 83 to 1692 121 to 1729 H140Y A276T I303S S304P T305Q ... tiling clone, available from MGC, AAA   1729/1729
(100 %)
3 diff
(99.9 %id)
DA358269 subthalamic nucleus .b 83 to 516 145 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
CD692188 normal nasopharynx .b 83 to 556 146 to 621       610/621
(98 %)
10 diff
(98.4 %id)
BX419177 brain, fetal brain .b 83 to 827 128 to 872       872/872
(100 %)
0 diff
(100 %id)
BX423364 brain, fetal brain .b 83 to 944 128 to 985       985/985
(100 %)
34 diff
(96.6 %id)
DB445776 testis .b 83 to 379 170 to 465       465/465
(100 %)
3 diff
(99.4 %id)
DB448846 testis .b 83 to 394 122 to 433       433/433
(100 %)
2 diff
(99.6 %id)
DB455500 testis .b 83 to 402 142 to 461       461/461
(100 %)
0 diff
(100 %id)
DB460968 testis .b 83 to 435 121 to 473       473/473
(100 %)
0 diff
(100 %id)
DB462437 testis .b 83 to 418 144 to 479       479/479
(100 %)
3 diff
(99.4 %id)
DB477568 hippocampus .b 83 to 458 121 to 496       496/498
(99 %)
5 diff
(99.0 %id)
DB482870 hippocampus .b 83 to 470 121 to 508       508/508
(100 %)
4 diff
(99.3 %id)
AA402340   .b 83 to 123 162 to 202       202/202
(100 %)
5 diff
(97.6 %id)
BG719368 testis .b 83 to 717 118 to 754       754/794
(94 %)
15 diff
(98.2 %id)
BG722299 testis .b 83 to 569 126 to 612       612/612
(100 %)
6 diff
(99.1 %id)
BG718887 testis .b 83 to 721 110 to 745       738/745
(99 %)
14 diff
(98.2 %id)
BI520180 brain, medulla .b 83 to 816 109 to 848   fully sequenced,   848/848
(100 %)
22 diff
(97.5 %id)
BI520576 brain, medulla .b 83 to 723 120 to 765       765/973
(78 %)
6 diff
(99.4 %id)
BI826329 brain, medulla .b 83 to 503 106 to 532       532/535
(99 %)
6 diff
(98.9 %id)
BI545401 brain, hippocampus .b 83 to 691 155 to 766       766/868
(88 %)
15 diff
(98.3 %id)
BI463320 testis .b 83 to 722 127 to 767       765/797
(95 %)
18 diff
(97.8 %id)
BI461897 testis .b 83 to 500 127 to 550       550/551
(99 %)
16 diff
(97.1 %id)
BI465207 testis .b 83 to 670 152 to 741       737/744
(99 %)
30 diff
(96.0 %id)
BI561048 testis .b 83 to 726 126 to 773       773/900
(85 %)
18 diff
(98.0 %id)
BI561890 testis .b 83 to 506 185 to 622       622/627
(99 %)
26 diff
(95.9 %id)
BM921283 pooled brain, lung, testis .b 83 to 719 109 to 747       734/1069
(68 %)
47 diff
(95.7 %id)
CX756538 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 83 to 721 106 to 738     Submitted on the opposite strand 738/833
(88 %)
10 diff
(98.8 %id)
CD300577 testis .b 83 to 723 130 to 773       754/929
(81 %)
8 diff
(99.2 %id)
CD557364 testis .b 83 to 722 134 to 778       751/917
(81 %)
16 diff
(98.3 %id)
TI_43963544   .b 83 to 864 148 to 927   fully sequenced,   894/927
(96 %)
34 diff
(96.4 %id)
TI_43963779   .b 83 to 723 188 to 833   AAA   765/1028
(74 %)
12 diff
(98.9 %id)
TI_57173441   .b 83 to 503 141 to 567       532/570
(93 %)
14 diff
(97.6 %id)
TI_44165478   .b 83 to 691 274 to 885       761/987
(77 %)
15 diff
(98.5 %id)
TI_44349283   .b 83 to 726 211 to 858       774/985
(78 %)
19 diff
(98.1 %id)
TI_44350422   .b 83 to 506 264 to 701       617/706
(87 %)
26 diff
(96.4 %id)
NM_031956.2   .b 83 to 1693 175 to 1785 exact RefSeq, AAA   1785/1785
(100 %)
0 diff
(100 %id)
DB025851 testis .b 83 to 579 105 to 601   capped   600/600
(100 %)
2 diff
(99.7 %id)
DB027350 testis .b 83 to 439 165 to 521   capped   520/520
(100 %)
0 diff
(100 %id)
DB029304 testis .b 83 to 584 105 to 606   capped   605/605
(100 %)
1 diff
(99.9 %id)
DB034040 testis .b 83 to 526 127 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB035630 testis .b 83 to 499 141 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DB039704 testis .b 83 to 557 105 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB041991 testis .b 83 to 531 137 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
DB052545 testis .b 83 to 542 114 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB054770 testis .b 83 to 544 105 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB060063 testis .b 83 to 455 121 to 493   capped   492/492
(100 %)
0 diff
(100 %id)
BP369735 testis .b 83 to 497 150 to 564       564/564
(100 %)
0 diff
(100 %id)
BP370171 testis .b 83 to 506 127 to 550       550/550
(100 %)
5 diff
(99.1 %id)
BP370793 testis .b 83 to 495 126 to 536       536/576
(93 %)
30 diff
(94.8 %id)
TI_1948121277   .b 127 to 726 125 to 724       598/1114
(53 %)
10 diff
(99.2 %id)
CV024396 mixed .b 136 to 726 1 to 591       591/613
(96 %)
3 diff
(99.6 %id)
EF432564 breast cancer .b 136 to 1603 1 to 1468 H140Y A276T     1468/1468
(100 %)
2 diff
(99.9 %id)
TI_1948105270   .b 136 to 752 129 to 745   fully sequenced,   617/745
(82 %)
7 diff
(99.1 %id)
TI_1948105452   .b 136 to 752 134 to 754   fully sequenced,   621/754
(82 %)
9 diff
(98.9 %id)
TI_1948105628   .b 136 to 644 134 to 642   fully sequenced,   509/642
(79 %)
7 diff
(99.0 %id)
TI_1948105629   .b 614 to 1106 605 to 113   fully sequenced,   493/605
(81 %)
1 diff
(99.9 %id)
TI_1948105271   .b 691 to 1106 530 to 116   fully sequenced,   415/530
(78 %)
1 diff
(99.9 %id)
TI_1948105453   .b 691 to 1106 531 to 114   fully sequenced,   418/531
(78 %)
6 diff
(98.9 %id)
BU561208 testis .b 728 to 1373 1 to 647       647/705
(91 %)
21 diff
(97.1 %id)
BU569604 testis .b 728 to 1224 1 to 501       501/951
(52 %)
17 diff
(98.3 %id)
BU570269 testis .b 728 to 1376 1 to 663       663/879
(75 %)
29 diff
(96.8 %id)
BI520635 brain, medulla .b 732 to 1645 925 to 1       925/930
(99 %)
28 diff
(97.0 %id)
TI_43963780   .b 732 to 1645 925 to 1       925/930
(99 %)
28 diff
(97.0 %id)
BI520820 brain, medulla .b 772 to 1462 861 to 156   fully sequenced,   706/861
(81 %)
25 diff
(97.1 %id)
TI_43963545   .b 772 to 1462 861 to 156   fully sequenced,   706/861
(81 %)
25 diff
(97.1 %id)
TI_149271131   .b 1021 to 1666 728 to 83   AAA   646/1006
(64 %)
24 diff
(97.7 %id)
AI028248   .b 1132 to 1670 543 to 5       539/543
(99 %)
0 diff
(100 %id)
AW196755 pooled germ cell tumors .b 1228 to 1694 475 to 9       467/475
(98 %)
0 diff
(100 %id)
DB526373 testis .b 1229 to 1673 1 to 445     Submitted on the opposite strand 445/445
(100 %)
0 diff
(100 %id)
DB539725 hippocampus .b 1231 to 1693 1 to 461     Submitted on the opposite strand 459/461
(99 %)
14 diff
(97.0 %id)
DB520925 testis .b 1239 to 1686 1 to 448     Submitted on the opposite strand 448/450
(99 %)
2 diff
(99.6 %id)
BG215088   .b 1241 to 1666 18 to 443   AAA   426/443
(96 %)
6 diff
(98.7 %id)
BU674226 lung, Primary Lung Epithelial Cells .b 1241 to 1666 441 to 16   AAA   426/426
(100 %)
1 diff
(99.8 %id)
AW592478 pooled .b 1250 to 1685 450 to 15   AAA   436/436
(100 %)
2 diff
(99.6 %id)
DB514024 testis .b 1259 to 1693 1 to 436     Submitted on the opposite strand 436/436
(100 %)
5 diff
(98.9 %id)
AA411837.
matches multiple genes
  .b 1264 to 1674 413 to 3     also hits gene SLC40A1 411/413
(99 %)
0 diff
(100 %id)
AI702059 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 1269 to 1693 425 to 1       425/425
(100 %)
0 diff
(100 %id)
BX098327 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 1298 to 1693 410 to 15   AAA   396/396
(100 %)
0 diff
(100 %id)
AI624713 pooled germ cell tumors .b 1334 to 1694 364 to 3       362/364
(99 %)
0 diff
(100 %id)
BG204025   .b 1461 to 1685 1 to 225   AAA   225/225
(100 %)
7 diff
(96.9 %id)
BG209802   .b 1461 to 1661 1 to 202       202/202
(100 %)
3 diff
(98.6 %id)
BG210318   .b 1461 to 1693 1 to 233   AAA   233/233
(100 %)
4 diff
(98.3 %id)
BG216688   .b 1461 to 1693 1 to 233   AAA   233/233
(100 %)
4 diff
(98.3 %id)
BG218777   .b 1462 to 1694 1 to 232       232/244
(95 %)
9 diff
(96.4 %id)
BG182282   .b 1463 to 1685 1 to 223   AAA   224/223
(100 %)
5 diff
(97.8 %id)
BG186493   .b 1463 to 1693 1 to 234   AAA   234/234
(100 %)
5 diff
(97.9 %id)
BG189669   .b 1463 to 1685 1 to 222   AAA   223/222
(100 %)
7 diff
(96.9 %id)
BG190220   .b 1463 to 1685 1 to 224   AAA   226/224
(100 %)
4 diff
(98.3 %id)
BG205607   .b 1463 to 1693 1 to 232   AAA   234/232
(100 %)
5 diff
(97.9 %id)
BG207695   .b 1463 to 1692 1 to 232   AAA   232/232
(100 %)
5 diff
(97.9 %id)
BG210830   .b 1463 to 1686 1 to 227   AAA   228/227
(100 %)
6 diff
(97.4 %id)
BG214538   .b 1463 to 1673 1 to 214   AAA   218/214
(101 %)
9 diff
(95.8 %id)
BG218778   .b 1463 to 1686 1 to 225   AAA   229/225
(101 %)
11 diff
(95.2 %id)
BG219260   .b 1463 to 1688 1 to 229   AAA   231/229
(100 %)
8 diff
(96.6 %id)
BG220263   .b 1463 to 1661 39 to 244       212/244
(86 %)
8 diff
(96.8 %id)
BG197805   .b 1464 to 1693 12 to 242   AAA   233/242
(96 %)
8 diff
(96.7 %id)
BG219261   .b 1464 to 1684 1 to 222   AAA   222/222
(100 %)
2 diff
(99.1 %id)
BG186494   .b 1465 to 1693 9 to 237   AAA   231/237
(97 %)
7 diff
(97.1 %id)
BG216689   .b 1465 to 1693 247 to 18   AAA Submitted on the opposite strand 230/231
(99 %)
3 diff
(98.8 %id)
BG183842   .b 1466 to 1673 218 to 11     Submitted on the opposite strand 208/229
(90 %)
0 diff
(100 %id)
BG184378   .b 1466 to 1693 11 to 237   AAA   229/237
(96 %)
6 diff
(97.5 %id)
BG209307   .b 1466 to 1773 50 to 358   AAA   311/358
(86 %)
9 diff
(97.5 %id)
BG211341   .b 1466 to 1666 1 to 201       201/201
(100 %)
1 diff
(99.6 %id)
BG219772   .b 1466 to 1693 11 to 238   AAA   229/238
(96 %)
7 diff
(97.1 %id)
BG193797   .b 1467 to 1688 24 to 245   AAA   222/245
(90 %)
7 diff
(97.2 %id)
BG218776   .b 1467 to 1661 48 to 243       196/243
(80 %)
6 diff
(97.6 %id)
BG215087   .b 1468 to 1693 1 to 225   AAA   225/225
(100 %)
1 diff
(99.6 %id)
BG199406   .b 1470 to 1693 15 to 240   AAA   227/240
(94 %)
6 diff
(97.5 %id)
BG461413   .b 1472 to 1673 9 to 207   AAA   199/207
(96 %)
7 diff
(96.7 %id)
BG206674   .b 1475 to 1693 17 to 235   AAA   219/235
(93 %)
7 diff
(97.1 %id)
BG184888   .b 1476 to 1693 25 to 243   AAA   219/243
(90 %)
7 diff
(97.2 %id)
BG197306   .b 1476 to 1661 15 to 201       187/201
(93 %)
6 diff
(97.1 %id)
BG190735   .b 1479 to 1661 1 to 183       183/183
(100 %)
1 diff
(99.5 %id)
BG184377   .b 1481 to 1693 29 to 245   AAA   217/245
(88 %)
7 diff
(97.2 %id)
BG210319   .b 1485 to 1693 20 to 223   AAA   204/223
(91 %)
8 diff
(96.5 %id)
BG199405   .b 1486 to 1688 1 to 204   AAA   204/204
(100 %)
2 diff
(99.1 %id)
BG184376   .b 1495 to 1694 1 to 199       199/211
(94 %)
4 diff
(98.2 %id)
AK314066 testis .c 83 to 1532 175 to 1624   tiling clone,   1624/1625
(99 %)
3 diff
(99.9 %id)
DB034049 testis .c 83 to 362 175 to 454   capped   453/453
(100 %)
0 diff
(100 %id)
DB337283 testis .c 1116 to 1670 555 to 1       555/555
(100 %)
0 diff
(100 %id)
AA983255 Kidney, kidney tumor .c 1207 to 1686 484 to 6   tiling clone,   479/484
(98 %)
2 diff
(99.6 %id)
AK225725 testis .d 83 to 1842 126 to 1885 exact tiling clone, AAA   1885/1885
(100 %)
0 diff
(100 %id)
BX423363 brain, fetal brain .e 1 to 849 848 to 1 M80X tiling clone,   850/850
(100 %)
3 diff
(99.7 %id)
DB551726 hippocampus .e 446 to 886 1 to 441   tiling clone, AAA Submitted on the opposite strand 441/441
(100 %)
1 diff
(99.8 %id)
DB510797 testis .e 471 to 881 1 to 413   tiling clone, Submitted on the opposite strand 413/413
(100 %)
6 diff
(98.6 %id)
BI462881 testis .f 1 to 736 1 to 741 E72* tiling clone,   741/771
(96 %)
19 diff
(97.6 %id)
BX358475 Placenta Cot 25-normalized .f 21 to 729 1 to 709 K106X N107X E108X tiling clone,   709/709
(100 %)
1 diff
(99.9 %id)
DB047149 testis .g 1 to 564 2 to 565 exact tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
DB514661 testis .h 1 to 410 1 to 410 exact tiling clone, Submitted on the opposite strand 410/415
(98 %)
3 diff
(99.3 %id)
BI828273 brain, medulla .i 83 to 676 135 to 769 P2A A3H P4A A5P A6C ... tiling clone,   769/769
(100 %)
46 diff
(94.1 %id)
BI463193 testis .i 83 to 577 156 to 683 V19R V20C S21F L22P Q24P ... tiling clone,   683/683
(100 %)
40 diff
(94.2 %id)
TI_57175011   .i 83 to 676 166 to 800 P2A A3H P4A A5P A6C ...     769/800
(96 %)
45 diff
(94.4 %id)
DB038951 testis .j 83 to 468 173 to 558 R15L K16E T17N G18W V19S ... tiling clone, capped   557/557
(100 %)
1 diff
(99.9 %id)
AL110441 testis .k 1 to 461 1 to 461 exact tiling clone,   461/461
(100 %)
0 diff
(100 %id)
CD690439 normal nasopharynx Gene TTC29, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C