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Gene NTRK2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
512 supporting clones for gene NTRK2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA454086 tongue, tumor tissue .a 1 to 490 2 to 491   tiling clone, capped   490/490
(100 %)
3 diff
(99.4 %id)
DA449367 tongue, tumor tissue .a 91 to 643 2 to 555   tiling clone, capped   554/554
(100 %)
3 diff
(99.5 %id)
DA283111 corpus callosum .a 155 to 695 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA741860   .a 155 to 643 2 to 491   capped   490/490
(100 %)
1 diff
(99.8 %id)
DA957811 Spleen .a 155 to 712 2 to 559   tiling clone, capped   558/558
(100 %)
0 diff
(100 %id)
NM_006180.3   .a 183 to 5790 1 to 5608 exact RefSeq,   5608/5608
(100 %)
0 diff
(100 %id)
AF410899   .a 637 to 4694 1 to 4057 exact tiling clone,   4057/4057
(100 %)
6 diff
(99.9 %id)
BG912939 anaplastic oligodendroglioma with 1p/19qloss, brain .b 1 to 625 1 to 629   tiling clone,   629/629
(100 %)
19 diff
(97.0 %id)
NM_001018064.1   .b 1 to 5560 1 to 5560 exact RefSeq,   5560/5560
(100 %)
0 diff
(100 %id)
DA441933 tongue, tumor tissue .b 357 to 904 2 to 550   capped   549/549
(100 %)
2 diff
(99.7 %id)
DA455130 tongue, tumor tissue .b 360 to 945 2 to 587   capped   586/586
(100 %)
4 diff
(99.4 %id)
DA161088 amygdala .b 362 to 925 2 to 565   capped   564/565
(99 %)
3 diff
(99.5 %id)
DA452566 tongue, tumor tissue .b 362 to 928 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA700200   .b 372 to 897 2 to 527   capped   526/526
(100 %)
0 diff
(100 %id)
BI667398 brain, hypothalamus .b 386 to 955 1 to 575       575/719
(79 %)
20 diff
(97.3 %id)
TI_44343356   .b 391 to 955 95 to 664       570/808
(70 %)
20 diff
(97.6 %id)
DB504539 hypothalamus .b 394 to 872 1 to 478       478/478
(100 %)
4 diff
(99.2 %id)
DB506161 hypothalamus .b 394 to 866 1 to 472       472/472
(100 %)
3 diff
(99.4 %id)
DA437097 tongue, tumor tissue .b 395 to 980 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
DA453466 tongue, tumor tissue .b 399 to 959 2 to 563   capped   562/563
(99 %)
3 diff
(99.5 %id)
DA281227 corpus callosum .b 401 to 973 2 to 579   capped   578/578
(100 %)
8 diff
(98.7 %id)
DA448305 tongue, tumor tissue .b 402 to 948 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
BP194916 brain .b 406 to 986 1 to 581       581/583
(99 %)
3 diff
(99.5 %id)
DA186902 amygdala .b 407 to 962 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA272446 caudate nucleus .b 407 to 948 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
DA440064 tongue, tumor tissue .b 407 to 978 2 to 573   capped   572/572
(100 %)
3 diff
(99.5 %id)
DA443115 tongue, tumor tissue .b 407 to 890 2 to 485   capped   484/484
(100 %)
1 diff
(99.8 %id)
DA552067   .b 407 to 887 2 to 482   capped   481/481
(100 %)
0 diff
(100 %id)
DA747124   .b 407 to 982 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DB012518 esophageal, tumor tissue .b 407 to 970 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DB179171 kidney, tumor tissue .b 407 to 962 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DB194772 trachea .b 407 to 931 2 to 527   capped   526/526
(100 %)
2 diff
(99.7 %id)
DA305071 hippocampus .b 409 to 997 2 to 590   capped   589/589
(100 %)
2 diff
(99.7 %id)
DA424110   .b 420 to 890 2 to 472   capped   471/471
(100 %)
0 diff
(100 %id)
BI666701 brain, hypothalamus .b 441 to 997 1 to 571       571/780
(73 %)
32 diff
(95.9 %id)
DA244108 brain .b 442 to 1035 2 to 595   capped   594/594
(100 %)
5 diff
(99.2 %id)
DB214555 trachea .b 444 to 956 2 to 515   capped   514/514
(100 %)
5 diff
(99.1 %id)
TI_44343153   .b 445 to 997 129 to 695       567/904
(62 %)
33 diff
(96.4 %id)
AU279654   .b 446 to 1003 1 to 558       558/558
(100 %)
1 diff
(99.9 %id)
DA451926 tongue, tumor tissue .b 446 to 1021 2 to 578   capped   577/577
(100 %)
3 diff
(99.5 %id)
DA750439   .b 446 to 1017 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA179472 amygdala .b 447 to 997 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
DA270177 caudate nucleus .b 447 to 1006 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA424345   .b 447 to 1001 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA433549 tongue, tumor tissue .b 447 to 1127 2 to 693   capped   692/700
(98 %)
14 diff
(98.0 %id)
DA442820 tongue, tumor tissue .b 447 to 1016 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
DA446078 tongue, tumor tissue .b 447 to 1020 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA557824   .b 447 to 1023 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA692406   .b 447 to 997 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA719094   .b 447 to 1023 2 to 578   capped   577/578
(99 %)
2 diff
(99.7 %id)
DA812819 Pancreas .b 447 to 1268 2 to 824   tiling clone, capped   823/823
(100 %)
8 diff
(99.1 %id)
DA153806 amygdala .b 448 to 935 2 to 490   capped   489/489
(100 %)
2 diff
(99.6 %id)
DA160262 amygdala .b 448 to 890 2 to 444   capped   443/443
(100 %)
2 diff
(99.6 %id)
DA169517 amygdala .b 448 to 945 2 to 499   capped   498/498
(100 %)
1 diff
(99.8 %id)
DA180289 amygdala .b 448 to 1004 2 to 560   capped   559/559
(100 %)
3 diff
(99.5 %id)
DA201739 brain .b 448 to 1068 2 to 622   capped   621/621
(100 %)
1 diff
(99.9 %id)
DA204326 brain .b 448 to 1025 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA251277 caudate nucleus .b 448 to 1026 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA324525 hippocampus .b 448 to 992 2 to 547   capped   546/546
(100 %)
2 diff
(99.7 %id)
DA393847 thalamus .b 448 to 1038 2 to 592   capped   591/591
(100 %)
2 diff
(99.7 %id)
DA396011 thalamus .b 448 to 1019 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
DA434080 tongue, tumor tissue .b 448 to 935 2 to 489   capped   488/488
(100 %)
2 diff
(99.6 %id)
DA440930 tongue, tumor tissue .b 448 to 1005 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA453381 tongue, tumor tissue .b 448 to 1002 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA744777   .b 448 to 998 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
BP349939 brain .b 448 to 1030 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
DB119554 thymus .b 448 to 991 2 to 545   capped   544/544
(100 %)
2 diff
(99.7 %id)
DB177109 kidney, tumor tissue .b 448 to 990 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA150544 amygdala .b 449 to 1010 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
DA294265 hippocampus .b 449 to 1027 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA435371 tongue, tumor tissue .b 449 to 1020 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
DA443275 tongue, tumor tissue .b 449 to 1033 2 to 585   capped   584/584
(100 %)
2 diff
(99.7 %id)
DA446715 tongue, tumor tissue .b 449 to 1028 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
DA455074 tongue, tumor tissue .b 449 to 1012 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA459561 tongue, tumor tissue .b 449 to 954 2 to 507   capped   506/506
(100 %)
2 diff
(99.7 %id)
DA751603   .b 449 to 1005 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB241432 trachea .b 449 to 1033 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DB013119 esophageal, tumor tissue .b 452 to 1025 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
AL118938 amygdala .b 455 to 789 1 to 335       335/335
(100 %)
4 diff
(98.9 %id)
CA392216 eye, RPE/choroid .b 460 to 931 1 to 472       472/472
(100 %)
1 diff
(99.8 %id)
DB482837 hippocampus .b 476 to 968 1 to 493       493/493
(100 %)
4 diff
(99.2 %id)
DA216208 brain .b 477 to 945 2 to 470   capped   469/469
(100 %)
1 diff
(99.8 %id)
DA703089   .b 483 to 1017 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
DA324006 hippocampus .b 491 to 866 2 to 377   capped   376/376
(100 %)
0 diff
(100 %id)
DA356103 subthalamic nucleus .b 491 to 1054 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA450161 tongue, tumor tissue .b 491 to 1068 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
DA440422 tongue, tumor tissue .b 494 to 1059 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DB019367 esophageal, tumor tissue .b 515 to 1071 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
BG910738 anaplastic oligodendroglioma with 1p/19qloss, brain .b 532 to 1150 1 to 624       624/1061
(58 %)
19 diff
(98.3 %id)
DB473319 hippocampus .b 566 to 1041 16 to 491       476/491
(96 %)
6 diff
(98.8 %id)
U12140 hippocampus .b 586 to 4293 1 to 3707 exact tiling clone,   3707/3707
(100 %)
4 diff
(99.9 %id)
DA507645 brain .b 741 to 1310 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA056510 cerebellum .b 744 to 1332 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
BI832862 pooled pancreas and spleen .b 771 to 1553 1 to 786       786/789
(99 %)
11 diff
(98.7 %id)
CV569257 cornea, eye .b 816 to 1433 1 to 618       618/618
(100 %)
1 diff
(99.9 %id)
DA562326 heart .b 822 to 1402 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DR002747 fetal brain .b 823 to 1493 2 to 670       669/670
(99 %)
13 diff
(98.1 %id)
AF400441   .b 834 to 3443 1 to 2610 exact     2610/2610
(100 %)
0 diff
(100 %id)
S76473   .b 839 to 3997 14 to 3173 exact AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 3160/3173
(99 %)
8 diff
(99.8 %id)
DB241014 trachea .b 866 to 1458 2 to 594   capped   593/593
(100 %)
1 diff
(99.9 %id)
DA135884 alzheimer cortex .b 914 to 1451 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
EL733593 mixed .b 939 to 1530 1 to 592       592/598
(98 %)
8 diff
(98.7 %id)
BP331207 rectum .b 951 to 1533 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BG954771 colon .b 959 to 1226 278 to 11       273/278
(98 %)
0 diff
(100 %id)
AW580227 head_neck .b 1026 to 1553 15 to 541       527/541
(97 %)
13 diff
(97.6 %id)
BP250017 hippocampus .b 1048 to 1632 1 to 585       585/587
(99 %)
1 diff
(99.9 %id)
AL603196 human skeletal muscle .b 1229 to 1829 1 to 601       601/601
(100 %)
0 diff
(100 %id)
EB388037 eye, optic nerve .b 1403 to 2241 1 to 839       839/842
(99 %)
7 diff
(99.2 %id)
EB387413 eye, optic nerve .b 1430 to 2014 7 to 591       585/591
(98 %)
8 diff
(98.7 %id)
R52410 whole brain .b 1529 to 2037 1 to 519       519/521
(99 %)
29 diff
(94.5 %id)
H14507 whole brain .b 1534 to 1923 1 to 404       404/409
(98 %)
17 diff
(95.9 %id)
R82954 liver and spleen .b 1553 to 1703 1 to 151       151/151
(100 %)
2 diff
(98.7 %id)
BF945242 nervous_normal .b 1563 to 1852 1 to 291       291/291
(100 %)
2 diff
(99.4 %id)
DA059345 cerebellum .b 1621 to 2175 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA201311 brain .b 1624 to 2205 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
AI903733 breast .b 1629 to 1820 192 to 1       192/192
(100 %)
1 diff
(99.5 %id)
BP346852 brain .b 1666 to 2248 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BP346867 brain .b 1667 to 2248 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
BF927065 nervous_tumor .b 1679 to 2210 536 to 4     Submitted on the opposite strand 533/576
(92 %)
5 diff
(99.2 %id)
AI202076 anaplastic oligodendroglioma, brain .b 1707 to 1957 269 to 20   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 250/269
(92 %)
1 diff
(99.7 %id)
DA438281 tongue, tumor tissue .b 1772 to 2301 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
AL707663 human skeletal muscle .b 1788 to 2241 1 to 455       455/458
(99 %)
10 diff
(97.9 %id)
BF823518 kidney_tumor .b 1862 to 2330 487 to 22     Submitted on the opposite strand 466/491
(94 %)
6 diff
(98.8 %id)
BF823519 kidney_tumor .b 1862 to 2323 477 to 18     Submitted on the opposite strand 460/481
(95 %)
3 diff
(99.4 %id)
BF823522 kidney_tumor .b 1862 to 2304 451 to 9     Submitted on the opposite strand 443/455
(97 %)
5 diff
(99.0 %id)
BF828250 head_normal .b 1862 to 2327 25 to 487       463/498
(92 %)
11 diff
(97.8 %id)
BF828253 head_normal .b 1862 to 2313 465 to 14     Submitted on the opposite strand 452/469
(96 %)
3 diff
(99.4 %id)
AA553509 Schwannoma tumor .b 1864 to 2336 504 to 32       474/505
(93 %)
15 diff
(97.1 %id)
BE701822 nervous_normal .b 1866 to 1955 1 to 90       90/109
(82 %)
1 diff
(99.1 %id)
R82997 liver and spleen .b 1869 to 2064 197 to 1       197/205
(96 %)
5 diff
(97.6 %id)
BQ332467 lung_tumor .b 1943 to 2336 13 to 403       391/479
(81 %)
11 diff
(97.8 %id)
BQ332488 lung_tumor .b 1943 to 2336 13 to 403       391/479
(81 %)
11 diff
(97.8 %id)
BF829266 head_normal .b 1997 to 2330 349 to 19     Submitted on the opposite strand 329/349
(94 %)
4 diff
(98.9 %id)
M62219   .b 2041 to 2241 1 to 202       202/215
(93 %)
11 diff
(94.9 %id)
AL707530 human skeletal muscle .b 2346 to 2960 1 to 615       615/615
(100 %)
2 diff
(99.7 %id)
BP349336 brain .b 2530 to 3111 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
DA328816 hippocampus .b 3948 to 4481 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
DA244079 brain .b 3963 to 4537 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DA773933 brain .b 4037 to 4611 2 to 576   tiling clone, capped   575/575
(100 %)
0 diff
(100 %id)
AW950822   .b 4059 to 4581 7 to 530       524/530
(98 %)
6 diff
(98.9 %id)
T08952   .b 4064 to 4464 1 to 402       402/402
(100 %)
1 diff
(99.8 %id)
AB209118 brain .c 1 to 5803 1 to 5802 exact tiling clone,   5802/5802
(100 %)
7 diff
(99.9 %id)
DA442671 tongue, tumor tissue .d 1 to 574 2 to 575   tiling clone, capped   574/574
(100 %)
2 diff
(99.7 %id)
DA447624 tongue, tumor tissue .d 29 to 606 2 to 581   capped   580/583
(99 %)
4 diff
(99.4 %id)
DA438837 tongue, tumor tissue .d 34 to 615 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA017192 adrenal gland .d 35 to 549 2 to 516   capped   515/515
(100 %)
0 diff
(100 %id)
DA434074 tongue, tumor tissue .d 35 to 517 2 to 484   capped   483/483
(100 %)
0 diff
(100 %id)
DA441568 tongue, tumor tissue .d 35 to 610 2 to 578   capped   577/577
(100 %)
4 diff
(99.4 %id)
DA446183 tongue, tumor tissue .d 35 to 609 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DB015830 esophageal, tumor tissue .d 35 to 603 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA199672 brain .d 37 to 595 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA436210 tongue, tumor tissue .d 62 to 631 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA436618 tongue, tumor tissue .d 62 to 645 2 to 585   tiling clone, capped   584/584
(100 %)
0 diff
(100 %id)
DA167724 amygdala .d 107 to 648 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA747859   .d 119 to 681 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA436325 tongue, tumor tissue .d 121 to 682 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DA435406 tongue, tumor tissue .d 138 to 709 2 to 573   capped   572/572
(100 %)
3 diff
(99.5 %id)
DA437277 tongue, tumor tissue .d 155 to 758 2 to 605   capped   604/604
(100 %)
4 diff
(99.4 %id)
DA290150 hippocampus .d 157 to 731 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DA749703   .d 167 to 749 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
DA454311 tongue, tumor tissue .d 169 to 754 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
DA750448   .d 169 to 749 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA743807   .d 176 to 686 9 to 519   capped   511/511
(100 %)
0 diff
(100 %id)
NM_001018065.2   .d 185 to 8507 1 to 8323 exact RefSeq, AAA Possibly primed on the genome, locally A rich (19/22 A in genome downstream of last aligned base) 8323/8323
(100 %)
0 diff
(100 %id)
DA442913 tongue, tumor tissue .d 244 to 796 2 to 554   capped   553/553
(100 %)
3 diff
(99.5 %id)
DA702780   .d 245 to 783 2 to 540   capped   539/539
(100 %)
3 diff
(99.5 %id)
DA711108   .d 245 to 812 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
EB385438 eye, optic nerve .d 259 to 961 8 to 710       703/710
(99 %)
6 diff
(99.2 %id)
AF410901   .d 282 to 8507 1 to 8223 exact tiling clone, AAA Possibly primed on the genome, locally A rich (19/22 A in genome downstream of last aligned base) 8223/8223
(100 %)
8 diff
(100.0 %id)
NM_001018066.2   .e 1 to 8275 1 to 8275 exact RefSeq, AAA Possibly primed on the genome, locally A rich (19/22 A in genome downstream of last aligned base) 8275/8275
(100 %)
0 diff
(100 %id)
AF410900   .e 98 to 8275 1 to 8175 exact tiling clone, AAA Possibly primed on the genome, locally A rich (19/22 A in genome downstream of last aligned base) 8175/8175
(100 %)
8 diff
(100.0 %id)
AF410898   .e 1871 to 8275 2 to 6405   AAA Possibly primed on the genome, locally A rich (19/22 A in genome downstream of last aligned base) 6404/6405
(99 %)
9 diff
(99.9 %id)
AL134306 brain .e 1871 to 2338 2 to 469       468/469
(99 %)
6 diff
(98.8 %id)
T08646   .e 2565 to 2976 1 to 416       416/428
(97 %)
7 diff
(98.4 %id)
DA244578 brain .e 3611 to 4157 2 to 548   tiling clone, capped   547/547
(100 %)
0 diff
(100 %id)
DA318779 hippocampus .e 4051 to 4603 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA320955 hippocampus .e 4407 to 4883 2 to 479   capped   478/478
(100 %)
1 diff
(99.8 %id)
DA804993 brain .e 4556 to 5098 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DB174220 kidney, tumor tissue .e 5663 to 6225 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB308967 hippocampus .e 7712 to 8275 565 to 1       565/565
(100 %)
1 diff
(99.9 %id)
DB327132 brain .e 7738 to 8273 537 to 1       537/538
(99 %)
1 diff
(99.9 %id)
DB347387 kidney, tumor tissue .e 7936 to 8271 337 to 1       337/337
(100 %)
1 diff
(99.8 %id)
DA434546 tongue, tumor tissue .f 1 to 295 2 to 297   tiling clone, capped   296/296
(100 %)
1 diff
(99.7 %id)
NM_001007097.1   .f 182 to 7292 1 to 7111 exact RefSeq,   7111/7111
(100 %)
0 diff
(100 %id)
AK289904 corpus callosum .f 194 to 2557 1 to 2364 exact tiling clone,   2364/2364
(100 %)
0 diff
(100 %id)
BC031835 Brain, anaplastic oligodendroglioma with1p/19q loss .f 323 to 2603 1 to 2281 exact available from MGC, AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 2281/2281
(100 %)
6 diff
(99.8 %id)
S76474   .f 632 to 2488 14 to 1870 exact     1857/1870
(99 %)
7 diff
(99.7 %id)
AF508964   .f 634 to 7287 1 to 6651 exact AAA Possibly primed on the genome, locally A rich (19/22 A in genome downstream of last aligned base) 6651/6651
(100 %)
13 diff
(99.9 %id)
X75958 hippocampus .f 634 to 2858 1 to 2224 exact     2224/2224
(100 %)
5 diff
(99.8 %id)
BM931197 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .f 1512 to 1921 1 to 410   fully sequenced,   410/410
(100 %)
0 diff
(100 %id)
AW770836 colon, juvenile granulosa tumor .f 1578 to 2177 600 to 1       600/600
(100 %)
0 diff
(100 %id)
BP362230 thalamus .f 1604 to 2185 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BQ332514 lung_tumor .f 1749 to 2287 542 to 5       538/542
(99 %)
0 diff
(100 %id)
EB388087 eye, optic nerve .f 1777 to 2441 147 to 811       665/811
(81 %)
6 diff
(99.3 %id)
AI263387 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 1794 to 2175 382 to 1       382/382
(100 %)
0 diff
(100 %id)
AI092806 heart .f 1812 to 2189 378 to 1       378/395
(95 %)
0 diff
(100 %id)
CA429249 Cell Line, Chondrosarcoma .f 1825 to 2463 656 to 19   AAA   638/638
(100 %)
2 diff
(99.7 %id)
BQ575614 Chondrosarcoma Grade II, Left Pelvis .f 1826 to 2568 753 to 16   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 738/738
(100 %)
4 diff
(99.5 %id)
BG536909 lung .f 1841 to 2581 1 to 739       739/781
(94 %)
13 diff
(98.4 %id)
BU743062 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .f 1860 to 2470 628 to 19   fully sequenced, AAA   610/610
(100 %)
1 diff
(99.9 %id)
AI857927 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .f 1864 to 2594 726 to 1       726/726
(100 %)
8 diff
(98.9 %id)
DB465451 hippocampus .f 1867 to 2287 1 to 420       420/421
(99 %)
7 diff
(98.4 %id)
DB474341 hippocampus .f 1867 to 2356 1 to 490       490/490
(100 %)
1 diff
(99.8 %id)
BQ575381 Chondrosarcoma Grade II, Left Pelvis .f 1924 to 2568 662 to 19   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 644/645
(99 %)
2 diff
(99.7 %id)
BX106263 multiple sclerosis lesions .f 1935 to 2598 1 to 664       664/664
(100 %)
0 diff
(100 %id)
BF057891 brain, oligodendroglioma .f 1952 to 2191 1 to 240       240/242
(99 %)
4 diff
(98.4 %id)
AI857938 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .f 1956 to 2594 639 to 1       639/639
(100 %)
0 diff
(100 %id)
AI418929 brain, glioblastoma (pooled) .f 2007 to 2574 568 to 1       568/568
(100 %)
0 diff
(100 %id)
BM727152 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .f 2013 to 2595 1 to 583   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 583/583
(100 %)
2 diff
(99.7 %id)
AI569710 anaplastic oligodendroglioma, brain .f 2040 to 2470 444 to 14   AAA   431/431
(100 %)
0 diff
(100 %id)
BF195143 brain, glioblastoma (pooled) .f 2043 to 2562 520 to 1       520/520
(100 %)
0 diff
(100 %id)
CF595793 Stomach, adenocarcinoma .f 2188 to 2896 43 to 766       724/785
(92 %)
17 diff
(97.9 %id)
BQ181352 Knee, Osteoarthritic Cartilage .f 2258 to 2922 662 to 1       662/662
(100 %)
0 diff
(100 %id)
DB313312 tongue, tumor tissue .f 2346 to 2907 562 to 1       562/562
(100 %)
1 diff
(99.9 %id)
AI870619 anaplastic oligodendroglioma, brain .f 2372 to 2905 535 to 1       535/535
(100 %)
2 diff
(99.7 %id)
BE148667 head_neck .f 2374 to 3003 630 to 1   tiling clone, Submitted on the opposite strand 630/632
(99 %)
7 diff
(98.9 %id)
DB575778 hypothalamus .f 2423 to 2905 1 to 483     Submitted on the opposite strand 483/487
(99 %)
2 diff
(99.6 %id)
DB577476 hypothalamus .f 2429 to 2905 1 to 477     Submitted on the opposite strand 477/481
(99 %)
2 diff
(99.6 %id)
CN280833 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .f 2440 to 3143 1 to 704       704/704
(100 %)
3 diff
(99.6 %id)
AL707289 human skeletal muscle .f 2450 to 3013 1 to 563       563/563
(100 %)
4 diff
(99.3 %id)
DB564066 hypothalamus .f 2499 to 2905 1 to 409     Submitted on the opposite strand 409/413
(99 %)
10 diff
(97.6 %id)
AA984930 Spleen .f 2519 to 2905 387 to 1       387/387
(100 %)
1 diff
(99.8 %id)
BX496851 Liver .f 2532 to 3185 1 to 655       655/655
(100 %)
6 diff
(99.1 %id)
DA243978 brain .f 2536 to 3128 2 to 595   capped   594/594
(100 %)
3 diff
(99.5 %id)
DB171398 kidney, tumor tissue .f 2549 to 3115 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA259555 caudate nucleus .f 2575 to 3140 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA403343 thalamus .f 2678 to 3215 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DB238340 trachea .f 2702 to 3285 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
EB388127 eye, optic nerve .f 2781 to 3634 1 to 854       854/854
(100 %)
2 diff
(99.8 %id)
DA217666 brain .f 2787 to 3322 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
BM263674 Pancreas, Purified pancreatic islet .f 2831 to 3424 13 to 606       594/606
(98 %)
9 diff
(98.6 %id)
DB224543 trachea .f 2833 to 3376 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA742702   .f 2867 to 3423 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
AL708131 human skeletal muscle .f 2870 to 3629 1 to 760       760/760
(100 %)
0 diff
(100 %id)
CK824574 Pancreas, Purified pancreatic islet .f 2874 to 3402 1 to 529     Submitted on the opposite strand 529/529
(100 %)
0 diff
(100 %id)
AL713745 amygdala .f 2926 to 7287 11 to 4371   tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (19/22 A in genome downstream of last aligned base) 4361/4361
(100 %)
6 diff
(99.9 %id)
W28094 eye, retina .f 2950 to 3382 434 to 2       433/475
(91 %)
0 diff
(100 %id)
DA317803 hippocampus .f 2991 to 3507 2 to 518   capped   517/517
(100 %)
0 diff
(100 %id)
DA340277 hippocampus .f 2999 to 3572 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA230511 brain .f 3034 to 3676 2 to 645   capped   644/644
(100 %)
1 diff
(99.9 %id)
DA452224 tongue, tumor tissue .f 3224 to 3815 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DA123910 cerebellum .f 3276 to 3818 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA184501 amygdala .f 3322 to 3644 2 to 324   capped   323/323
(100 %)
0 diff
(100 %id)
AL833196 lymph node .f 3392 to 7289 1 to 3898   tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (19/22 A in genome downstream of last aligned base) 3898/3898
(100 %)
1 diff
(100.0 %id)
DA332414 hippocampus .f 3409 to 3994 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA189123 amygdala .f 3411 to 4016 2 to 607   capped   606/606
(100 %)
0 diff
(100 %id)
DA230484 brain .f 3422 to 4082 2 to 662   capped   661/661
(100 %)
0 diff
(100 %id)
DA242136 brain .f 3433 to 4014 2 to 584   capped   583/583
(100 %)
2 diff
(99.7 %id)
DA440660 tongue, tumor tissue .f 3521 to 4107 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DA409511 thalamus .f 3522 to 4087 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA238799 brain .f 3526 to 4112 2 to 590   capped   589/589
(100 %)
2 diff
(99.7 %id)
AL133916 amygdala .f 3555 to 4499 1 to 943       943/947
(99 %)
5 diff
(99.5 %id)
N79113 multiple sclerosis lesions .f 3562 to 3841 1 to 281       281/284
(98 %)
7 diff
(97.6 %id)
AF086101   .f 3565 to 4343 1 to 780   AAA Possibly primed on the genome, locally A rich (19/22 A in genome downstream of last aligned base) 780/780
(100 %)
1 diff
(99.9 %id)
N76721 multiple sclerosis lesions .f 3578 to 4002 1 to 430   fully sequenced,   430/430
(100 %)
4 diff
(99.1 %id)
DA247410 brain .f 3619 to 4187 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA318346 hippocampus .f 3645 to 4220 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA335510 hippocampus .f 3647 to 4229 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA122856 cerebellum .f 3651 to 4182 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
DA190478 amygdala .f 3651 to 4232 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
DA239098 brain .f 3659 to 4234 2 to 577   capped   576/577
(99 %)
1 diff
(99.9 %id)
DB168628 kidney, tumor tissue .f 3683 to 4260 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
DA417025 thalamus .f 3684 to 4247 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
FN064216 breast carcinoma .f 3684 to 3759 73 to 1     Submitted on the opposite strand 73/73
(100 %)
3 diff
(95.9 %id)
DA314415 hippocampus .f 3689 to 4258 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA295750 hippocampus .f 3698 to 4258 2 to 565   capped   564/564
(100 %)
5 diff
(99.2 %id)
DA214950 brain .f 3700 to 4261 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA223545 brain .f 3732 to 4280 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA319825 hippocampus .f 3733 to 4288 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
AW950828   .f 3735 to 4342 607 to 1     Submitted on the opposite strand 607/608
(99 %)
1 diff
(99.9 %id)
AW955684   .f 3737 to 4338 1 to 602   AAA   602/607
(99 %)
1 diff
(99.9 %id)
DA458277 tongue, tumor tissue .f 3737 to 4326 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
DA194023 amygdala .f 3741 to 4322 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA150494 amygdala .f 3742 to 4310 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA237868 brain .f 3742 to 4325 2 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
DA390166 thalamus .f 3777 to 4335 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA394526 thalamus .f 3797 to 4386 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
DA457383 tongue, tumor tissue .f 3803 to 4373 2 to 572   capped   571/571
(100 %)
5 diff
(99.2 %id)
AI867454 pooled germ cell tumors .f 3810 to 4350 541 to 1       541/541
(100 %)
0 diff
(100 %id)
BM263376 Pancreas, Purified pancreatic islet .f 3818 to 4349 532 to 1       532/532
(100 %)
0 diff
(100 %id)
DB230491 trachea .f 3828 to 4412 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA243334 brain .f 3830 to 4425 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DA120859 cerebellum .f 3832 to 4384 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA147137 amygdala .f 3835 to 4393 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA183753 amygdala .f 3838 to 4388 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA422985   .f 3844 to 4375 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
DA227592 brain .f 3852 to 4479 2 to 629   capped   628/628
(100 %)
1 diff
(99.9 %id)
DA458213 tongue, tumor tissue .f 3854 to 4429 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
DA318530 hippocampus .f 3857 to 4430 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA318556 hippocampus .f 3857 to 4427 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB542090 hippocampus .f 3877 to 4350 1 to 474     Submitted on the opposite strand 474/474
(100 %)
0 diff
(100 %id)
BF432231 brain, glioblastoma (pooled) .f 3877 to 4343 467 to 1       467/467
(100 %)
0 diff
(100 %id)
DB543159 hippocampus .f 3882 to 4350 1 to 469     Submitted on the opposite strand 469/469
(100 %)
0 diff
(100 %id)
BM721524 eye, fetal eye .f 3888 to 4338 451 to 1     Submitted on the opposite strand 451/451
(100 %)
1 diff
(99.8 %id)
AI655270 pooled germ cell tumors .f 3895 to 4348 454 to 1       454/454
(100 %)
0 diff
(100 %id)
BF439949 brain, glioblastoma (pooled) .f 3895 to 4343 449 to 1       449/449
(100 %)
0 diff
(100 %id)
DB532119 hippocampus .f 3919 to 4350 1 to 432     Submitted on the opposite strand 432/432
(100 %)
0 diff
(100 %id)
N62351 multiple sclerosis lesions .f 3925 to 4343 423 to 1       423/423
(100 %)
5 diff
(98.9 %id)
AA626243   .f 3937 to 4346 410 to 1       410/410
(100 %)
0 diff
(100 %id)
BM703716 eye, human retina .f 3950 to 4343 1 to 394   AAA Possibly primed on the genome, locally A rich (19/22 A in genome downstream of last aligned base) 394/394
(100 %)
0 diff
(100 %id)
TI_151703551   .f 3950 to 4343 481 to 88   AAA Possibly primed on the genome, locally A rich (19/22 A in genome downstream of last aligned base) 394/1206
(32 %)
0 diff
(100 %id)
AI341407 pooled germ cell tumors .f 3964 to 4343 380 to 1       380/380
(100 %)
0 diff
(100 %id)
N59253 multiple sclerosis lesions .f 3972 to 4344 376 to 1   fully sequenced,   376/376
(100 %)
4 diff
(99.0 %id)
DA457851 tongue, tumor tissue .f 4015 to 4576 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
AI358918 brain, glioblastoma (pooled) .f 4072 to 4347 276 to 1       276/276
(100 %)
0 diff
(100 %id)
AA457077   .f 4075 to 4351 1 to 277   fully sequenced,   277/277
(100 %)
0 diff
(100 %id)
DA019861   .f 4093 to 4659 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA709862   .f 4110 to 4667 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA177692 amygdala .f 4140 to 4660 2 to 522   capped   521/521
(100 %)
0 diff
(100 %id)
AA456968   .f 4189 to 4351 163 to 1   fully sequenced,   163/163
(100 %)
0 diff
(100 %id)
DB472247 hippocampus .f 4196 to 4673 1 to 478       478/478
(100 %)
1 diff
(99.8 %id)
DA437503 tongue, tumor tissue .f 4264 to 4803 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA760981 tongue .f 4265 to 5007 2 to 747   capped   746/752
(99 %)
17 diff
(97.8 %id)
DA755257   .f 4274 to 4825 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA744580   .f 4287 to 4833 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA154795 amygdala .f 4359 to 4901 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA450412 tongue, tumor tissue .f 4360 to 4920 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA442701 tongue, tumor tissue .f 4406 to 4971 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA307441 hippocampus .f 4458 to 5047 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA134841 alzheimer cortex .f 4546 to 5113 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA444125 tongue, tumor tissue .f 4592 to 5169 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA132006 alzheimer cortex .f 4623 to 5170 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA386794 thalamus .f 4624 to 5191 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA171833 amygdala .f 4649 to 5212 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA349771 substantia nigra .f 4653 to 5225 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB467870 hippocampus .f 4659 to 5121 1 to 463       463/465
(99 %)
2 diff
(99.6 %id)
DA442830 tongue, tumor tissue .f 4711 to 5283 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
AL119924 amygdala .f 4732 to 5381 1 to 650       650/650
(100 %)
2 diff
(99.7 %id)
AK092267   .f 4963 to 7287 1 to 2325   available from FLJ,   2325/2325
(100 %)
1 diff
(100.0 %id)
DA181515 amygdala .f 5021 to 5523 2 to 504   capped   503/503
(100 %)
0 diff
(100 %id)
DA300221 hippocampus .f 5041 to 5606 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA263887 caudate nucleus .f 5179 to 5489 2 to 312   capped   311/311
(100 %)
0 diff
(100 %id)
DA746715   .f 5180 to 5441 2 to 263   capped   262/262
(100 %)
0 diff
(100 %id)
W28478 eye, retina .f 5257 to 5768 524 to 16       509/537
(94 %)
0 diff
(100 %id)
DA147156 amygdala .f 5330 to 5912 2 to 585   capped   584/584
(100 %)
2 diff
(99.7 %id)
DA171828 amygdala .f 5342 to 5903 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
DA251811 caudate nucleus .f 5342 to 5923 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
DA975234 synovial membrane tissue from rheumatioidarthritis .f 5345 to 5908 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DA274367 corpus callosum .f 5347 to 5921 2 to 573   capped   572/572
(100 %)
3 diff
(99.5 %id)
DA366196 subthalamic nucleus .f 5352 to 5927 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
BE170143 head_neck .f 5382 to 5766 392 to 7     Submitted on the opposite strand 386/398
(96 %)
0 diff
(100 %id)
DA368313 subthalamic nucleus .f 5394 to 5953 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA360984 subthalamic nucleus .f 5610 to 6176 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
AJ420458   .f 5658 to 7287 8 to 1638   AAA Possibly primed on the genome, locally A rich (19/22 A in genome downstream of last aligned base) 1631/1638
(99 %)
6 diff
(99.7 %id)
DA344451 substantia nigra .f 5720 to 6307 2 to 589   capped   588/588
(100 %)
2 diff
(99.7 %id)
BF527759 anaplastic oligodendroglioma with 1p/19qloss, brain .f 5726 to 6501 1 to 771       771/1036
(74 %)
21 diff
(98.0 %id)
BF931989 nervous_tumor .f 5772 to 6142 377 to 5     Submitted on the opposite strand 373/379
(98 %)
0 diff
(100 %id)
DB468548 hippocampus .f 5784 to 6210 1 to 427       427/427
(100 %)
0 diff
(100 %id)
TI_57219848   .f 5803 to 6652 36 to 887       852/888
(95 %)
10 diff
(98.9 %id)
TI_57219909   .f 5803 to 6531 28 to 758       731/964
(75 %)
4 diff
(99.6 %id)
BI753618 brain .f 5804 to 6652 1 to 851       851/852
(99 %)
10 diff
(98.9 %id)
BI757044 brain .f 5804 to 6531 1 to 730       730/936
(77 %)
4 diff
(99.6 %id)
AV722740 hypothalamus .f 5830 to 6489 1 to 652       652/652
(100 %)
15 diff
(97.7 %id)
EB388840 eye, optic nerve .f 5901 to 6678 1 to 778       778/778
(100 %)
0 diff
(100 %id)
DB325307 tongue .f 6746 to 7287 542 to 1       542/542
(100 %)
0 diff
(100 %id)
DB324791   .f 6768 to 7287 520 to 1       520/520
(100 %)
0 diff
(100 %id)
BC075804 Brain, anaplastic oligodendroglioma with1p/19q loss .g 1 to 3069 1 to 3069 exact tiling clone, AAA Possibly primed on the genome, locally A rich (19/23 A in genome downstream of last aligned base) 3069/3069
(100 %)
2 diff
(100.0 %id)
DC393999 esophageal, tumor tissue .h 1 to 539 1 to 539   tiling clone,   539/539
(100 %)
0 diff
(100 %id)
AK294285 amygdala .h 65 to 1855 1 to 1791 exact tiling clone,   1791/1791
(100 %)
3 diff
(99.9 %id)
DC314755 amygdala .h 65 to 586 1 to 523       523/523
(100 %)
1 diff
(99.9 %id)
DC333602 hippocampus .h 65 to 578 1 to 514       514/514
(100 %)
4 diff
(99.3 %id)
CD103051 Pooled-Skin .h 66 to 526 1 to 466       466/626
(74 %)
15 diff
(97.7 %id)
DC367158   .h 69 to 590 1 to 522       522/522
(100 %)
1 diff
(99.9 %id)
DC422625 uterus .h 75 to 618 1 to 546       546/546
(100 %)
2 diff
(99.7 %id)
DC320222 brain .h 100 to 657 1 to 558       558/567
(98 %)
2 diff
(99.7 %id)
DA445354 tongue, tumor tissue .i 1 to 575 2 to 577   tiling clone, capped   576/576
(100 %)
2 diff
(99.7 %id)
DA443783 tongue, tumor tissue .i 57 to 627 2 to 572   tiling clone, capped   571/571
(100 %)
1 diff
(99.9 %id)
DA081041 cerebellum .i 85 to 651 2 to 568   tiling clone, capped   567/567
(100 %)
1 diff
(99.9 %id)
DA178644 amygdala .i 88 to 599 2 to 514   capped   513/513
(100 %)
4 diff
(99.3 %id)
DA138138 alzheimer cortex .i 91 to 642 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA202144 brain .i 100 to 690 2 to 592   tiling clone, capped   591/591
(100 %)
2 diff
(99.7 %id)
EB385884 eye, optic nerve .i 677 to 1448 1 to 772   tiling clone,   772/772
(100 %)
0 diff
(100 %id)
BG272204 head/neck, nasopharyngeal carcinoma .j 1 to 313 1 to 313   tiling clone, Submitted on the opposite strand 313/336
(93 %)
3 diff
(99.2 %id)
DA433752 tongue, tumor tissue .j 158 to 771 2 to 613   tiling clone, capped   612/623
(98 %)
2 diff
(99.7 %id)
DA062526 cerebellum .j 361 to 923 2 to 565   tiling clone, capped   564/564
(100 %)
1 diff
(99.9 %id)
DA183580 amygdala .j 788 to 1108 2 to 323   capped   322/322
(100 %)
1 diff
(99.7 %id)
DA448334 tongue, tumor tissue .j 834 to 1399 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DA437737 tongue, tumor tissue .j 865 to 1438 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA449227 tongue, tumor tissue .j 865 to 1412 2 to 549   tiling clone, capped   548/548
(100 %)
1 diff
(99.9 %id)
DA126710 cerebellum .j 1019 to 1605 2 to 588   tiling clone, capped   587/587
(100 %)
0 diff
(100 %id)
DA747720   .k 1 to 570 2 to 571 exact tiling clone, capped   570/570
(100 %)
0 diff
(100 %id)
DA105106 cerebellum .l 1 to 549 2 to 550 exact tiling clone, capped   549/549
(100 %)
0 diff
(100 %id)
AK123824   .m-u 1 to 1841 2 to 1842 exact tiling clone, available from FLJ,   1842/1842
(100 %)
3 diff
(99.9 %id)
DA718762   .m-u 1 to 545 2 to 547   capped   546/555
(98 %)
3 diff
(99.5 %id)
F12182 brain, total brain .m-u 305 to 651 1 to 347       347/347
(100 %)
2 diff
(99.5 %id)
F12183 brain, total brain .m-u 305 to 652 1 to 348       348/348
(100 %)
2 diff
(99.5 %id)
R18491 whole brain .m-u 306 to 813 1 to 518       518/518
(100 %)
20 diff
(96.2 %id)
T64795 whole brain .m-u 334 to 729 1 to 395       395/395
(100 %)
6 diff
(98.5 %id)
AA455439 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .m-u 971 to 1407 1 to 436   tiling clone,   436/436
(100 %)
11 diff
(97.5 %id)
DB324209   .m-u 1300 to 1841 542 to 1       542/542
(100 %)
1 diff
(99.9 %id)
CR748576   .m-u 1353 to 1839 501 to 15   AAA Possibly primed on the genome, locally A rich (19/22 A in genome downstream of last aligned base) 487/487
(100 %)
1 diff
(99.8 %id)
BE858459 brain, glioblastoma (pooled) .m-u 1387 to 1842 463 to 8       456/463
(98 %)
0 diff
(100 %id)
AI143725 anaplastic oligodendroglioma, brain .m-u 1420 to 1842 424 to 2   tiling clone,   423/424
(99 %)
0 diff
(100 %id)
T72548 whole brain .m-u 1502 to 1796 296 to 1       296/301
(98 %)
6 diff
(98.1 %id)
F09815 brain, total brain .m-u 1511 to 1839 329 to 1       329/329
(100 %)
1 diff
(99.7 %id)
R41339 whole brain .m-u 1512 to 1840 349 to 8       342/362
(94 %)
0 diff
(100 %id)
F09814 brain, total brain .m-u 1513 to 1839 327 to 1       327/327
(100 %)
1 diff
(99.7 %id)
AI880136 astrocytoma, brain .m-u 1563 to 1827 265 to 1       265/265
(100 %)
2 diff
(99.3 %id)
DA215036 brain .n 1 to 529 2 to 531 T19D E20G S21K D22R V23R ... tiling clone, capped   530/530
(100 %)
2 diff
(99.7 %id)
DA128254 cerebellum .o-u 1 to 568 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
F07084 brain, total brain .o-u 1 to 344 1 to 344   tiling clone,   344/344
(100 %)
0 diff
(100 %id)
R20491 whole brain .o-u 2 to 94 1 to 93       93/93
(100 %)
0 diff
(100 %id)
CB154756 brain .o-u 74 to 636 1 to 563       563/563
(100 %)
0 diff
(100 %id)
AA410534 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .o-u 79 to 473 1 to 394       394/394
(100 %)
1 diff
(99.8 %id)
BQ325020 colon_ins .o-u 90 to 525 438 to 3       436/438
(99 %)
0 diff
(100 %id)
AI880198 astrocytoma, brain .o-u 110 to 333 1 to 224     Submitted on the opposite strand 224/224
(100 %)
0 diff
(100 %id)
BF955155 nervous_normal .o-u 150 to 667 520 to 4       517/520
(99 %)
0 diff
(100 %id)
EL946909 eyeball .o-u 173 to 627 22 to 476       455/476
(95 %)
6 diff
(98.8 %id)
BF955160 nervous_normal .o-u 180 to 654 487 to 13   tiling clone,   475/487
(97 %)
0 diff
(100 %id)
BF955174 nervous_normal .o-u 187 to 666 481 to 1       481/481
(100 %)
4 diff
(99.2 %id)
FN053930 breast carcinoma .o-u 275 to 378 104 to 1     Submitted on the opposite strand 104/104
(100 %)
2 diff
(98.1 %id)
BI600000 brain, hypothalamus .o-u 345 to 1121 9 to 781 exact     773/784
(98 %)
5 diff
(99.4 %id)
TI_45215647   .o-u 345 to 1121 103 to 875 exact     773/878
(88 %)
5 diff
(99.5 %id)
AI880312 astrocytoma, brain .o-u 347 to 596 1 to 250     Submitted on the opposite strand 250/250
(100 %)
0 diff
(100 %id)
FN047868 breast carcinoma .o-u 354 to 447 1 to 94       94/94
(100 %)
0 diff
(100 %id)
FN121214 breast carcinoma .o-u 429 to 495 1 to 67       67/67
(100 %)
4 diff
(94.1 %id)
W27787 eye, retina .o-u 431 to 807 417 to 39       379/454
(83 %)
0 diff
(100 %id)
TI_154119214   .o-u 591 to 1356 852 to 91 T2P V15A AAA Possibly primed on the genome, locally A rich (19/22 A in genome downstream of last aligned base) 762/977
(77 %)
25 diff
(97.5 %id)
BQ339293 nervous_normal .o-u 606 to 977 379 to 6 exact     374/379
(98 %)
0 diff
(100 %id)
AI081305 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .o-u 612 to 986 375 to 1 exact     375/375
(100 %)
0 diff
(100 %id)
BQ773742 Chondrosarcoma Grade II, Left Pelvis .o-u 629 to 1353 738 to 19 exact AAA Possibly primed on the genome, locally A rich (19/22 A in genome downstream of last aligned base) 720/721
(99 %)
8 diff
(98.9 %id)
TI_154047752   .o-u 641 to 1353 803 to 93 exact AAA Possibly primed on the genome, locally A rich (19/22 A in genome downstream of last aligned base) 711/949
(74 %)
12 diff
(98.8 %id)
BF949633 nervous_normal .o-u 645 to 1092 460 to 14 exact tiling clone,   447/460
(97 %)
0 diff
(100 %id)
BQ182154 Knee, Osteoarthritic Cartilage .o-u 687 to 1353 685 to 19 exact AAA Possibly primed on the genome, locally A rich (19/22 A in genome downstream of last aligned base) 667/667
(100 %)
0 diff
(100 %id)
AA041432 heart .o-u 700 to 957 1 to 258 exact fully sequenced,   258/258
(100 %)
0 diff
(100 %id)
BQ574584 Chondrosarcoma Grade II, Left Pelvis .o-u 701 to 1353 672 to 19 exact AAA Possibly primed on the genome, locally A rich (19/22 A in genome downstream of last aligned base) 654/654
(100 %)
2 diff
(99.7 %id)
CN479622 Knee, Osteoarthritic Cartilage .o-u 711 to 1356 664 to 19 T2P V15A tiling clone, AAA Possibly primed on the genome, locally A rich (19/22 A in genome downstream of last aligned base) 646/646
(100 %)
3 diff
(99.6 %id)
BQ574878 Chondrosarcoma Grade II, Left Pelvis .o-u 727 to 1353 646 to 19 exact AAA Possibly primed on the genome, locally A rich (19/22 A in genome downstream of last aligned base) 628/628
(100 %)
2 diff
(99.7 %id)
TI_44171324   .o-u 743 to 1353 80 to 695   AAA Possibly primed on the genome, locally A rich (19/22 A in genome downstream of last aligned base) 616/695
(88 %)
6 diff
(99.2 %id)
TI_44171597   .o-u 743 to 1229 147 to 635       489/986
(49 %)
6 diff
(99.4 %id)
BC031309 Brain, hippocampus .o-u 753 to 1353 1 to 602   available from MGC, AAA Possibly primed on the genome, locally A rich (19/22 A in genome downstream of last aligned base) 602/602
(100 %)
2 diff
(99.7 %id)
TI_151696935   .o-u 815 to 1353 648 to 109   AAA Possibly primed on the genome, locally A rich (19/22 A in genome downstream of last aligned base) 540/985
(54 %)
9 diff
(99.1 %id)
DB551689 hippocampus .o-u 886 to 1353 1 to 468     Submitted on the opposite strand 468/468
(100 %)
4 diff
(99.2 %id)
DB541001 hippocampus .o-u 897 to 1356 1 to 462     Submitted on the opposite strand 462/462
(100 %)
2 diff
(99.6 %id)
FN067758 breast carcinoma .o-u 903 to 986 82 to 1     Submitted on the opposite strand 82/83
(98 %)
2 diff
(97.6 %id)
DB534994 hippocampus .o-u 912 to 1354 1 to 446     Submitted on the opposite strand 446/452
(98 %)
9 diff
(98.1 %id)
DB535876 hippocampus .o-u 912 to 1351 1 to 441     Submitted on the opposite strand 441/443
(99 %)
6 diff
(98.7 %id)
DV460739 cochlea, ear .o-u 915 to 1304 388 to 1     Submitted on the opposite strand 388/391
(99 %)
9 diff
(97.7 %id)
AA041195 heart .o-u 927 to 1353 427 to 1   fully sequenced,   427/427
(100 %)
0 diff
(100 %id)
CV570953 cornea, eye .o-u 928 to 1358 473 to 42     Submitted on the opposite strand 432/473
(91 %)
0 diff
(100 %id)
AW292267   .o-u 933 to 1353 438 to 18   AAA Possibly primed on the genome, locally A rich (19/22 A in genome downstream of last aligned base) 421/421
(100 %)
0 diff
(100 %id)
AI366468 brain, hippocampus (see description) .o-u 954 to 1310 376 to 19       358/376
(95 %)
0 diff
(100 %id)
AA410309 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .o-u 1182 to 1353 172 to 1       172/172
(100 %)
1 diff
(99.5 %id)
AA340613 Kidney .o-u 1187 to 1358 172 to 1     Submitted on the opposite strand 172/172
(100 %)
1 diff
(99.5 %id)
AA347011 heart .o-u 1200 to 1355 156 to 1       156/156
(100 %)
0 diff
(100 %id)
FN108788 breast carcinoma .o-u 1225 to 1342 1 to 117       117/117
(100 %)
1 diff
(99.2 %id)
C00423   .o-u 1293 to 1359 1 to 67   tiling clone,   67/67
(100 %)
0 diff
(100 %id)
DA452087 tongue, tumor tissue .p 1 to 555 2 to 556 exact tiling clone, capped   555/555
(100 %)
1 diff
(99.9 %id)
DA744038   .p 1 to 500 2 to 501 A3P capped   500/500
(100 %)
1 diff
(99.8 %id)
DA440882 tongue, tumor tissue .p 4 to 545 2 to 543 exact capped   542/542
(100 %)
0 diff
(100 %id)
DA742292   .p 5 to 517 2 to 514 exact capped   513/515
(99 %)
2 diff
(99.7 %id)
DA230087 brain .p 6 to 530 2 to 527 Q6T I7D P8S S9E R10P ... capped   526/526
(100 %)
1 diff
(99.9 %id)
DA444373 tongue, tumor tissue .p 22 to 601 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA755912   .p 22 to 602 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DA433881 tongue, tumor tissue .p 28 to 542 13 to 526   capped   514/514
(100 %)
1 diff
(99.9 %id)
DA707127   .p 28 to 537 9 to 518   capped   510/510
(100 %)
0 diff
(100 %id)
DA738810   .p 32 to 301 2 to 271   capped   270/279
(96 %)
1 diff
(99.7 %id)
DA743987   .p 58 to 616 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA726430   .p 64 to 520 2 to 458   capped   457/457
(100 %)
0 diff
(100 %id)
DA310712 hippocampus .p 75 to 653 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA741302   .p 99 to 669 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
DA396532 thalamus .p 122 to 719 2 to 601   capped   600/600
(100 %)
2 diff
(99.7 %id)
DA221218 brain .p 289 to 869 2 to 582   capped   581/581
(100 %)
2 diff
(99.7 %id)
DA081220 cerebellum .p 290 to 740 2 to 452   capped   451/451
(100 %)
0 diff
(100 %id)
DA158972 amygdala .p 290 to 862 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA177060 amygdala .p 290 to 610 2 to 324   capped   323/323
(100 %)
2 diff
(99.4 %id)
DA177147 amygdala .p 290 to 603 2 to 315   capped   314/314
(100 %)
1 diff
(99.7 %id)
DA212579 brain .p 290 to 835 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DA298706 hippocampus .p 290 to 865 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA307427 hippocampus .p 290 to 881 2 to 593   capped   592/592
(100 %)
1 diff
(99.9 %id)
DA557137   .p 290 to 834 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DB212212 trachea .p 290 to 837 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DA149868 amygdala .p 291 to 865 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DA408238 thalamus .p 291 to 785 2 to 496   capped   495/495
(100 %)
1 diff
(99.8 %id)
DA320659 hippocampus .p 292 to 775 2 to 485   capped   484/484
(100 %)
1 diff
(99.8 %id)
DA459178 tongue, tumor tissue .p 292 to 857 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA206304 brain .p 294 to 880 2 to 588   capped   587/587
(100 %)
1 diff
(99.9 %id)
DA305031 hippocampus .p 294 to 863 2 to 573   capped   572/572
(100 %)
3 diff
(99.5 %id)
BP212042 cerebrum .p 294 to 873 1 to 579       579/579
(100 %)
2 diff
(99.7 %id)
DA152454 amygdala .p 295 to 818 2 to 525   capped   524/524
(100 %)
1 diff
(99.9 %id)
DA156254 amygdala .p 295 to 866 2 to 574   capped   573/573
(100 %)
4 diff
(99.4 %id)
DA162012 amygdala .p 295 to 868 2 to 575   capped   574/574
(100 %)
5 diff
(99.2 %id)
DA175018 amygdala .p 295 to 858 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA177234 amygdala .p 295 to 622 2 to 330   capped   329/329
(100 %)
2 diff
(99.4 %id)
DA207595 brain .p 295 to 859 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA281533 corpus callosum .p 295 to 836 2 to 544   capped   543/543
(100 %)
2 diff
(99.7 %id)
DA293746 hippocampus .p 295 to 875 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DA330845 hippocampus .p 295 to 852 2 to 560   capped   559/563
(99 %)
3 diff
(99.5 %id)
DA449827 tongue, tumor tissue .p 295 to 857 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA458851 tongue, tumor tissue .p 295 to 851 2 to 560   capped   559/559
(100 %)
3 diff
(99.5 %id)
DA553134   .p 295 to 854 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA563641 heart .p 295 to 788 2 to 500   capped   499/499
(100 %)
5 diff
(99.0 %id)
DB014763 esophageal, tumor tissue .p 295 to 875 2 to 583   capped   582/582
(100 %)
2 diff
(99.7 %id)
DB015072 esophageal, tumor tissue .p 295 to 708 2 to 415   capped   414/455
(90 %)
4 diff
(99.2 %id)
DA744361   .p 297 to 775 2 to 480   capped   479/479
(100 %)
2 diff
(99.6 %id)
BP193311 brain .p 305 to 888 1 to 583       583/583
(100 %)
7 diff
(98.8 %id)
DA441735 tongue, tumor tissue .p 305 to 873 2 to 570   capped   569/569
(100 %)
5 diff
(99.2 %id)
DA744438   .p 306 to 785 2 to 484   capped   483/494
(97 %)
6 diff
(98.8 %id)
DB126596 thymus .p 306 to 847 2 to 543   capped   542/542
(100 %)
2 diff
(99.7 %id)
BP193720 brain .p 307 to 889 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DA297323 hippocampus .p 307 to 874 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DA299021 hippocampus .p 307 to 876 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DA551597   .p 307 to 820 2 to 515   capped   514/514
(100 %)
1 diff
(99.9 %id)
DA175964 amygdala .p 308 to 888 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DA243701 brain .p 308 to 876 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA323087 hippocampus .p 308 to 868 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA446181 tongue, tumor tissue .p 308 to 874 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA743436   .p 308 to 818 2 to 512   capped   511/511
(100 %)
0 diff
(100 %id)
DA947290 Spleen .p 308 to 866 2 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
DA962085 Spleen .p 308 to 863 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
DB265990 uterus .p 308 to 794 2 to 488   capped   487/487
(100 %)
2 diff
(99.6 %id)
DA711745   .p 312 to 873 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA110562 cerebellum .p 317 to 881 9 to 571   capped   563/563
(100 %)
4 diff
(99.3 %id)
DN991325 brain, whole brain .p 332 to 966 9 to 643   tiling clone,   635/643
(98 %)
0 diff
(100 %id)
DA310588 hippocampus .p 335 to 912 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA559307   .p 341 to 899 2 to 560   capped   559/560
(99 %)
1 diff
(99.9 %id)
DA150984 amygdala .p 343 to 851 2 to 511   capped   510/510
(100 %)
2 diff
(99.7 %id)
DA440386 tongue, tumor tissue .q 1 to 574 2 to 575   tiling clone, capped   574/574
(100 %)
1 diff
(99.9 %id)
DA744694   .q 66 to 587 2 to 524 exact tiling clone, capped   523/523
(100 %)
2 diff
(99.7 %id)
DA434762 tongue, tumor tissue .r 1 to 511 2 to 512   tiling clone, capped   511/511
(100 %)
0 diff
(100 %id)
DA748943   .r 5 to 572 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA514529 brain .r 10 to 544 9 to 543   capped   535/535
(100 %)
0 diff
(100 %id)
DA752802   .r 24 to 587 2 to 565 exact tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
DA292971 hippocampus .r 33 to 585 2 to 554 exact capped   553/553
(100 %)
0 diff
(100 %id)
DA724013   .s 1 to 550 2 to 551   tiling clone, capped   550/550
(100 %)
2 diff
(99.7 %id)
DA710039   .s 42 to 575 2 to 535 exact tiling clone, capped   534/534
(100 %)
0 diff
(100 %id)
DA286117 corpus callosum .t 1 to 491 2 to 494 L19P I20D P22T V23G G24R ... tiling clone, capped   493/495
(99 %)
3 diff
(99.4 %id)
CN268983 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .u 1 to 481 10 to 490 exact tiling clone,   481/492
(97 %)
9 diff
(98.2 %id)
TI_57162318   Gene NTRK2, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m-u, .n, .o-u, .p, .q, .r, .s, .t, .u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI