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Gene NOVA2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
38 supporting clones for gene NOVA2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AI816196 brain, frontal lobe .a 1 to 283 8 to 296   tiling clone,   289/296
(97 %)
8 diff
(97.3 %id)
AF083898   .a 63 to 1919 1 to 1857   tiling clone,   1857/1857
(100 %)
3 diff
(99.9 %id)
NM_002516.2   .a 63 to 1944 1 to 1882   RefSeq,   1882/1885
(99 %)
5 diff
(99.8 %id)
U70477   .a 92 to 1939 1 to 1848   tiling clone,   1848/1856
(99 %)
11 diff
(99.5 %id)
AW161512 brain, frontal lobe .a 116 to 335 1 to 220       220/220
(100 %)
9 diff
(96.0 %id)
AI929149 brain, frontal lobe .a 134 to 377 1 to 244       244/244
(100 %)
26 diff
(89.4 %id)
AI685183 adenocarcinoma, Pancreas .a 195 to 809 615 to 1       615/615
(100 %)
9 diff
(98.6 %id)
AI040329 parathyroid gland, parathyroid tumor .a 198 to 820 623 to 1       623/623
(100 %)
9 diff
(98.6 %id)
BE501446 Kidney .a 272 to 819 548 to 1       548/548
(100 %)
0 diff
(100 %id)
AI817845 colon, colon tumor, RER+ .a 276 to 429 154 to 1       154/154
(100 %)
3 diff
(98.1 %id)
AI480201 anaplastic oligodendroglioma, brain .a 309 to 838 530 to 1   tiling clone,   530/530
(100 %)
0 diff
(100 %id)
H40819 brain .a 332 to 537 74 to 283   fully sequenced,   210/283
(74 %)
6 diff
(97.9 %id)
AI564788 anaplastic oligodendroglioma, brain .a 339 to 820 481 to 1       481/485
(99 %)
1 diff
(99.8 %id)
AI343617 2 pooled tumors (clear cell type), Kidney .a 340 to 820 481 to 1       481/481
(100 %)
0 diff
(100 %id)
AI497589 anaplastic oligodendroglioma, brain .a 435 to 820 386 to 1       386/386
(100 %)
0 diff
(100 %id)
AW663697 pooled .a 444 to 820 377 to 1       377/377
(100 %)
0 diff
(100 %id)
AA970297 2 pooled tumors (clear cell type), Kidney .a 461 to 838 377 to 1       377/377
(100 %)
8 diff
(97.9 %id)
AI366715 anaplastic oligodendroglioma, brain .a 468 to 820 353 to 1       353/353
(100 %)
0 diff
(100 %id)
AA904538 pooled .a 474 to 838 364 to 1       364/364
(100 %)
4 diff
(99.0 %id)
H41603 brain .a 476 to 792 325 to 5   fully sequenced,   321/325
(98 %)
0 diff
(100 %id)
AW205242   .a 479 to 837 359 to 1       359/359
(100 %)
3 diff
(99.2 %id)
BQ631784 Pancreas, Purified pancreatic islet .a 482 to 830 1 to 349   fully sequenced,   349/349
(100 %)
0 diff
(100 %id)
BQ632083 Pancreas, Purified pancreatic islet .a 654 to 790 137 to 1   fully sequenced,   137/137
(100 %)
0 diff
(100 %id)
AI077966 parathyroid gland, parathyroid tumor .b-u 1 to 354 356 to 4       353/356
(99 %)
0 diff
(100 %id)
AI167803 parathyroid gland, parathyroid tumor .b-u 1 to 358 358 to 1   tiling clone,   358/358
(100 %)
1 diff
(99.8 %id)
BQ185875 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b-u 18 to 350 1 to 333       333/333
(100 %)
3 diff
(99.1 %id)
TI_151730080   .b-u 19 to 359 387 to 47   tiling clone,   341/1043
(32 %)
0 diff
(100 %id)
AI242983 pooled .b-u 60 to 358 298 to 1   tiling clone,   298/298
(100 %)
1 diff
(99.7 %id)
AI990298 pooled germ cell tumors .b-u 416 to 611 1 to 196   tiling clone, Submitted on the opposite strand 196/199
(98 %)
4 diff
(98.0 %id)
BQ187640 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b-u 858 to 1236 1 to 379   tiling clone, fully sequenced,   379/379
(100 %)
0 diff
(100 %id)
BQ188608 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b-u 968 to 1230 1 to 263   fully sequenced,   263/263
(100 %)
0 diff
(100 %id)
BM995981 lung, Metastatic Chondrosarcoma .b-u 1156 to 1447 310 to 19   AAA   292/292
(100 %)
1 diff
(99.7 %id)
BQ184325 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b-u 1200 to 1457 276 to 19   tiling clone, fully sequenced, AAA   258/258
(100 %)
0 diff
(100 %id)
BQ184542 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b-u 1206 to 1453 266 to 19   fully sequenced, AAA   248/248
(100 %)
1 diff
(99.6 %id)
AW005750 anaplastic oligodendroglioma, brain .b-u 1308 to 1448 141 to 1       141/141
(100 %)
0 diff
(100 %id)
BX108321 parathyroid gland, parathyroid tumor .c 1 to 698 1 to 701   tiling clone,   701/701
(100 %)
3 diff
(99.6 %id)
W33048 parathyroid gland, parathyroid tumor .c 1 to 439 17 to 457       441/458
(96 %)
7 diff
(98.5 %id)
W35411 parathyroid gland, parathyroid tumor .c 525 to 974 451 to 4   tiling clone,   448/451
(99 %)
1 diff
(99.8 %id)
BQ477870 insulinoma, Pancreas .d 1 to 400 1 to 401 P2S fully sequenced,   401/401
(100 %)
5 diff
(98.8 %id)
BQ477867.
matches multiple genes
insulinoma, Pancreas .d 1 to 483 1 to 483 P2S tiling clone, fully sequenced, Submitted on the opposite strand, also hits gene SENP6 483/483
(100 %)
4 diff
(99.2 %id)
BU579475 insulinoma, Pancreas .d 1 to 76 1 to 76   fully sequenced,   76/76
(100 %)
4 diff
(94.8 %id)
BU074205 insulinoma, Pancreas .d 22 to 589 583 to 16   tiling clone, fully sequenced, AAA   568/568
(100 %)
0 diff
(100 %id)
BF920602 nervous_tumor .d 284 to 465 156 to 337       182/337
(54 %)
6 diff
(98.3 %id)
BU069596 insulinoma, Pancreas .d 326 to 571 1 to 246   fully sequenced,   246/246
(100 %)
0 diff
(100 %id)
BQ477449 insulinoma, Pancreas .d 370 to 589 235 to 16   fully sequenced, AAA   220/220
(100 %)
0 diff
(100 %id)
BU069385 insulinoma, Pancreas .d 433 to 573 141 to 1   fully sequenced,   141/141
(100 %)
0 diff
(100 %id)
BQ477447.
matches multiple genes
insulinoma, Pancreas .d 453 to 589 152 to 16   fully sequenced, AAA Submitted on the opposite strand, also hits gene SENP6 137/137
(100 %)
2 diff
(98.6 %id)
? Gene Summary Gene on genome mRNA:.a, .b-u, .c, .d Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC