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Gene NHP2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
271 representative clones for gene NHP2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CB108754 Liver .a 1 to 472 1 to 473   tiling clone,   473/473
(100 %)
15 diff
(96.9 %id)
CU457128 epidermis .a 447 to 957 15 to 524   tiling clone,   510/531
(96 %)
10 diff
(98.2 %id)
DB570091.
matches multiple genes
hypothalamus .a 544 to 1048 504 to 4   tiling clone, also hits gene RMND5B 501/504
(99 %)
0 diff
(100 %id)
DB575534.
matches multiple genes
hypothalamus .a 544 to 1020 475 to 1     also hits gene RMND5B 475/475
(100 %)
5 diff
(99.0 %id)
BE799227 lung, small cell carcinoma .b 1 to 786 15 to 799 exact tiling clone,   785/799
(98 %)
9 diff
(98.9 %id)
NM_017838.3   .b 8 to 858 1 to 851 exact RefSeq, AAA   851/851
(100 %)
0 diff
(100 %id)
FN119760 breast carcinoma .b 19 to 83 67 to 2     Submitted on the opposite strand 66/69
(95 %)
0 diff
(100 %id)
CF593859 Human Placenta, placenta .b 27 to 800 29 to 805 exact     777/810
(95 %)
10 diff
(98.8 %id)
BP343469 stomach mucosa .b 31 to 612 1 to 582 exact     582/582
(100 %)
0 diff
(100 %id)
AA325813 brain, cerebellum .b 43 to 349 1 to 307       307/307
(100 %)
5 diff
(98.4 %id)
BG614178 embryonal carcinoma, testis .b 43 to 859 1 to 822 M128T V129G K130Q P131A H132P ...     822/822
(100 %)
20 diff
(97.6 %id)
BM009580 amelanotic melanoma, cell line, skin .b 53 to 790 1 to 739 exact     739/739
(100 %)
4 diff
(99.5 %id)
TI_59384339   .b 54 to 790 64 to 801 exact     738/738
(100 %)
3 diff
(99.6 %id)
BM009755 amelanotic melanoma, cell line, skin .b 65 to 830 1 to 771 T112D D113G L114P A116C A117S ...     771/772
(99 %)
7 diff
(99.1 %id)
TI_59384526   .b 65 to 830 60 to 830 T112D D113G L114P A116C A117S ...     771/772
(99 %)
7 diff
(99.1 %id)
DA571033 whole embryo, mainly head .b 70 to 517 2 to 447   fully sequenced, capped   446/446
(100 %)
1 diff
(99.8 %id)
BM011039 brain, neuroblastoma, cell line .b 70 to 859 1 to 793 exact tiling clone, AAA   793/793
(100 %)
12 diff
(98.5 %id)
TI_59379930   .b 70 to 862 68 to 864 exact AAA   797/834
(95 %)
14 diff
(98.4 %id)
TI_59381177   .b 70 to 830 97 to 866 K5N A6G D7R P8S D9R ...     767/770
(99 %)
23 diff
(97.1 %id)
BU601007 mixed (pool of 40 RNAs) .b 73 to 857 1 to 788 exact     788/794
(99 %)
11 diff
(98.7 %id)
TI_154191157   .b 73 to 859 50 to 835 exact     786/1008
(77 %)
10 diff
(99.1 %id)
BC006387 Muscle, rhabdomyosarcoma .b 74 to 858 1 to 785 exact available from MGC, AAA   785/785
(100 %)
0 diff
(100 %id)
CF129450 Chondrosarcoma Lung Metastasis cell lines, lung .b 74 to 765 1 to 692 exact     692/692
(100 %)
0 diff
(100 %id)
BI767465 pooled lung and spleen .b 75 to 138 1 to 64       64/64
(100 %)
0 diff
(100 %id)
BI768524 pooled lung and spleen .b 75 to 138 1 to 64       64/64
(100 %)
0 diff
(100 %id)
DA121802 cerebellum .b 78 to 606 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
BU601397 mixed (pool of 40 RNAs) .b 81 to 858 1 to 784 exact     784/788
(99 %)
11 diff
(98.7 %id)
CB120038 Liver .b 83 to 639 1 to 557 exact     557/557
(100 %)
0 diff
(100 %id)
CB125274 Liver .b 83 to 610 1 to 528       528/528
(100 %)
0 diff
(100 %id)
CB125315 Liver .b 83 to 630 1 to 548 G115X     548/548
(100 %)
0 diff
(100 %id)
CB126202 Liver .b 83 to 665 1 to 583 exact     583/583
(100 %)
0 diff
(100 %id)
CB125730 Liver .b 83 to 581 1 to 499       499/499
(100 %)
0 diff
(100 %id)
CB125846 Liver .b 83 to 630 1 to 548 exact     548/548
(100 %)
0 diff
(100 %id)
BP316688 pericardium .b 83 to 664 1 to 582 exact     582/582
(100 %)
0 diff
(100 %id)
AJ293309   .b 84 to 858 1 to 775 exact AAA   775/775
(100 %)
2 diff
(99.8 %id)
BE273945 Kidney, renal cell adenocarcinoma .b 84 to 780 1 to 695 exact     695/696
(99 %)
6 diff
(99.2 %id)
CB998332 placenta, pre-eclamptic placenta .b 84 to 859 28 to 807 exact AAA   780/807
(96 %)
20 diff
(97.6 %id)
CB118961 Liver .b 84 to 652 1 to 569 exact     569/569
(100 %)
0 diff
(100 %id)
BM834560 stomach .b 84 to 630 1 to 547 exact     547/547
(100 %)
0 diff
(100 %id)
AI815961 brain, frontal lobe .b 85 to 411 1 to 327   fully sequenced,   327/327
(100 %)
0 diff
(100 %id)
BM918117 blood, natural killer cells, cell line .b 86 to 858 1 to 773 exact AAA   773/773
(100 %)
3 diff
(99.7 %id)
CB152292 brain .b 87 to 611 1 to 525       525/525
(100 %)
0 diff
(100 %id)
DA519331 brain .b 88 to 622 2 to 536 exact capped   535/535
(100 %)
0 diff
(100 %id)
EC517488 Prostate .b 89 to 195 1 to 105       105/108
(97 %)
3 diff
(97.3 %id)
CA336330 anterior rhombomeres 1-4 (4 pooled) .b 89 to 387 24 to 321   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 298/353
(84 %)
11 diff
(96.9 %id)
BG829970 epithelioid carcinoma cell line, Pancreas .b 90 to 859 1 to 770 exact     770/852
(90 %)
6 diff
(99.3 %id)
TI_149311480   .b 90 to 858 848 to 82 exact AAA   767/979
(78 %)
6 diff
(99.4 %id)
BG761118 melanotic melanoma, high MDR (cell line), skin .b 91 to 842 1 to 754 exact     754/754
(100 %)
3 diff
(99.7 %id)
BP871422 embryonal kidney .b 94 to 388 1 to 295       295/301
(98 %)
2 diff
(99.4 %id)
CB151406 cervix, Uterine .b 94 to 706 1 to 613 exact     613/613
(100 %)
0 diff
(100 %id)
CD248853 embryonic stem cells, WA01, passage 38 .b 94 to 858 22 to 786 exact AAA   765/786
(97 %)
6 diff
(99.3 %id)
EC450416 Prostate .b 94 to 195 11 to 110       100/114
(87 %)
6 diff
(94.8 %id)
AF161404 blood .b 97 to 858 1 to 760 L38W A39L S40L R41A R42A ... AAA   760/760
(100 %)
4 diff
(99.5 %id)
BU600596 mixed (pool of 40 RNAs) .b 97 to 858 1 to 779 Q136P E137G A138G Y139L D140R ...     779/856
(91 %)
31 diff
(96.4 %id)
AW163697 brain, frontal lobe .b 99 to 534 1 to 436   fully sequenced,   436/436
(100 %)
0 diff
(100 %id)
BG480502 choriocarcinoma, placenta .b 99 to 832 1 to 733 exact     733/733
(100 %)
2 diff
(99.8 %id)
BG480071 choriocarcinoma, placenta .b 99 to 861 1 to 763 exact     763/771
(98 %)
7 diff
(99.1 %id)
BU502213 mixed (pool of 40 RNAs) .b 99 to 857 1 to 764 Q25L     764/771
(99 %)
21 diff
(97.3 %id)
BU598877 mixed (pool of 40 RNAs) .b 99 to 859 1 to 763 exact AAA   763/763
(100 %)
11 diff
(98.6 %id)
BU601158 mixed (pool of 40 RNAs) .b 99 to 851 1 to 758 Q14R F70I V71C N72Q K73Q ...     758/764
(99 %)
13 diff
(98.3 %id)
BC000009 Placenta, choriocarcinoma .b 100 to 858 1 to 759 exact available from MGC, AAA   759/759
(100 %)
0 diff
(100 %id)
CF127370 Chondrosarcoma Lung Metastasis cell lines, lung .b 100 to 845 1 to 747 exact     747/747
(100 %)
1 diff
(99.9 %id)
BM789061 Ascites, stomach .b 100 to 640 1 to 541 exact     541/541
(100 %)
0 diff
(100 %id)
TI_154191611   .b 100 to 860 51 to 810 exact     760/990
(76 %)
4 diff
(99.6 %id)
DB501948 hypothalamus .b 101 to 290 1 to 190       190/196
(96 %)
1 diff
(99.5 %id)
BG474597 eye, retinoblastoma .b 101 to 843 1 to 744 L153Y     744/744
(100 %)
6 diff
(99.2 %id)
AK000486   .b 102 to 858 1 to 757 exact available from FLJ, AAA   757/757
(100 %)
0 diff
(100 %id)
BF680456 Prostate .b 102 to 860 1 to 748 L151Y L153Y     748/847
(88 %)
23 diff
(97.3 %id)
BM788793 Ascites, stomach .b 102 to 746 1 to 645 exact     645/645
(100 %)
0 diff
(100 %id)
BM699507 eye, fetal eyes .b 102 to 411 1 to 310   fully sequenced,   310/310
(100 %)
0 diff
(100 %id)
BG468576 adenocarcinoma cell line, colon .b 103 to 860 1 to 757 exact AAA   757/757
(100 %)
6 diff
(99.3 %id)
BQ642333 lymph, lymphoma, cell line .b 103 to 858 1 to 757 exact AAA   757/757
(100 %)
1 diff
(99.9 %id)
EC566449 Prostate .b 104 to 216 1 to 114       114/114
(100 %)
3 diff
(97.4 %id)
BE747928 adenocarcinoma cell line, ovary .b 104 to 859 1 to 753 exact     753/753
(100 %)
12 diff
(98.5 %id)
BG324026 Kidney, renal cell adenocarcinoma .b 106 to 862 1 to 748 exact     748/783
(95 %)
16 diff
(98.0 %id)
BM009953 amelanotic melanoma, cell line, skin .b 106 to 860 1 to 754 L151Y L153M     754/807
(93 %)
10 diff
(98.8 %id)
BU855124 ovary, teratocarcinoma, cell line .b 106 to 860 12 to 767 exact     756/857
(88 %)
8 diff
(99.1 %id)
TI_59384739   .b 107 to 860 59 to 811 L151Y L153M     753/806
(93 %)
9 diff
(98.9 %id)
TI_227712972   .b 107 to 858 838 to 85 A6P AAA   754/1014
(74 %)
3 diff
(99.8 %id)
BU180277 ductal carcinoma, cell line, Pancreas .b 108 to 850 1 to 757 exact     757/916
(82 %)
31 diff
(96.7 %id)
TI_149303015   .b 108 to 858 837 to 86 exact AAA   752/931
(80 %)
2 diff
(99.8 %id)
TI_154045386   .b 108 to 858 832 to 85 T2K K3* AAA   748/974
(76 %)
13 diff
(98.7 %id)
BQ068969 brain, neuroblastoma, cell line .b 109 to 859 26 to 778 exact AAA   753/778
(96 %)
14 diff
(98.3 %id)
EC561659 Prostate .b 111 to 204 10 to 103       94/107
(87 %)
3 diff
(97.2 %id)
TI_59384859   .b 111 to 862 104 to 855 exact     752/845
(88 %)
7 diff
(99.2 %id)
TI_149286784   .b 111 to 858 826 to 81 N30X L38V A39L S40L R41A ... AAA   746/1096
(68 %)
5 diff
(99.6 %id)
BM010064 amelanotic melanoma, cell line, skin .b 112 to 862 1 to 751 exact     751/768
(97 %)
7 diff
(99.1 %id)
BM554714 amelanotic melanoma, cell line, skin .b 113 to 859 1 to 749 exact AAA   749/749
(100 %)
4 diff
(99.5 %id)
AW163328 brain, frontal lobe .b 114 to 411 1 to 298   fully sequenced,   298/298
(100 %)
0 diff
(100 %id)
BE791160 lung, small cell carcinoma .b 114 to 857 1 to 742 L81W A82Q G83E D84T T85H ...     742/742
(100 %)
5 diff
(99.4 %id)
BG424466 Kidney, renal cell adenocarcinoma .b 115 to 858 1 to 738 exact     738/829
(89 %)
15 diff
(98.2 %id)
BG397503 B-cells, primary B-cells from tonsils (cell line) .b 116 to 858 1 to 744 E75D     744/926
(80 %)
4 diff
(99.6 %id)
TI_59381168   .b 116 to 862 102 to 843 L153Y     742/753
(98 %)
12 diff
(98.5 %id)
BG949693 breast .b 118 to 256 153 to 15       139/153
(90 %)
0 diff
(100 %id)
BQ070793 brain, neuroblastoma, cell line .b 118 to 858 1 to 742 exact AAA   742/742
(100 %)
1 diff
(99.9 %id)
BQ052056 blood, natural killer cells, cell line .b 118 to 858 1 to 742 Q57H V96G     742/767
(96 %)
10 diff
(98.7 %id)
BQ877150 epidermoid carcinoma, cell line, lung .b 118 to 858 1 to 743 exact AAA   743/743
(100 %)
5 diff
(99.4 %id)
BU856066 ovary, teratocarcinoma, cell line .b 118 to 858 1 to 742 exact AAA   742/742
(100 %)
6 diff
(99.2 %id)
BU944722 adenocarcinoma, cell line, breast .b 118 to 858 1 to 741 exact AAA   741/741
(100 %)
2 diff
(99.8 %id)
BU783694 insulinoma, Pancreas .b 119 to 411 1 to 293   fully sequenced,   293/293
(100 %)
5 diff
(98.3 %id)
EC559304 Prostate .b 120 to 219 13 to 111       99/111
(89 %)
6 diff
(94.6 %id)
BI226029 Burkitt lymphoma, lymph .b 120 to 840 1 to 721 exact     721/874
(82 %)
10 diff
(98.9 %id)
EC483226 Prostate .b 121 to 222 16 to 116       101/119
(84 %)
2 diff
(98.4 %id)
AA355591   .b 123 to 242 1 to 120       120/120
(100 %)
0 diff
(100 %id)
DB484733 hypothalamus .b 125 to 381 1 to 257       257/258
(99 %)
7 diff
(97.3 %id)
EC516626 Prostate .b 126 to 232 1 to 106       106/106
(100 %)
1 diff
(99.1 %id)
BG477739 melanotic melanoma, skin .b 129 to 310 1 to 189       189/197
(95 %)
13 diff
(93.5 %id)
BE264383 lung, small cell carcinoma .b 132 to 700 1 to 569 exact     569/569
(100 %)
0 diff
(100 %id)
BE727505 melanotic melanoma, skin .b 132 to 856 1 to 725 Y24C     725/725
(100 %)
3 diff
(99.6 %id)
BE383350 brain, neuroblastoma .b 135 to 691 1 to 557 exact     557/557
(100 %)
0 diff
(100 %id)
BE728590 melanotic melanoma, skin .b 135 to 862 1 to 724 L43S T44R R45G K46S L47S ...     724/724
(100 %)
5 diff
(99.4 %id)
EC575186 Prostate .b 137 to 247 1 to 112       112/112
(100 %)
4 diff
(96.5 %id)
AI289984 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b 138 to 574 1 to 437     Submitted on the opposite strand 437/437
(100 %)
0 diff
(100 %id)
BU193517 eye, retinoblastoma .b 138 to 858 801 to 66 T2W K3T I4K K5N A6K ... AAA Submitted on the opposite strand 736/835
(88 %)
18 diff
(97.9 %id)
TI_149286726   .b 138 to 858 803 to 86 I4* AAA   718/1201
(59 %)
6 diff
(99.6 %id)
AI017387 Kidney .b 139 to 558 1 to 420     Submitted on the opposite strand 420/420
(100 %)
0 diff
(100 %id)
AI097374 uterus .b 139 to 630 1 to 492 exact   Submitted on the opposite strand 492/492
(100 %)
0 diff
(100 %id)
AI148576 placenta .b 139 to 639 1 to 501 exact   Submitted on the opposite strand 501/501
(100 %)
0 diff
(100 %id)
CR612055 thymus .b 140 to 862 1 to 723 exact     723/723
(100 %)
0 diff
(100 %id)
BX415060 thymus .b 140 to 862 1 to 720 Q36X L38W A39L S40L R41A ... fully sequenced,   720/720
(100 %)
2 diff
(99.8 %id)
AW014669   .b 140 to 601 1 to 462     Submitted on the opposite strand 462/462
(100 %)
0 diff
(100 %id)
AW575387 lymph .b 140 to 689 1 to 550 exact   Submitted on the opposite strand 550/550
(100 %)
0 diff
(100 %id)
BM793701 Ascites, stomach .b 140 to 702 1 to 563 exact     563/563
(100 %)
0 diff
(100 %id)
BQ709659 Spleen .b 141 to 858 17 to 735 exact AAA   719/735
(97 %)
8 diff
(99.0 %id)
BG109422 Bone, osteosarcoma, cell line .b 142 to 858 1 to 718 L81W A82Q G83E D84T T85H ... AAA   718/718
(100 %)
4 diff
(99.5 %id)
BX279873 epithelioid carcinoma, Pancreas .b 144 to 630 1 to 487 exact     487/487
(100 %)
0 diff
(100 %id)
CD671999 eye, Iris .b 145 to 778 1 to 634 exact fully sequenced,   634/634
(100 %)
0 diff
(100 %id)
BG829808 epithelioid carcinoma cell line, Pancreas .b 145 to 714 1 to 570 exact     570/570
(100 %)
0 diff
(100 %id)
BQ230900 epithelioid carcinoma, Pancreas .b 145 to 860 1 to 717 exact     717/721
(99 %)
2 diff
(99.8 %id)
BQ647430 hepatocellular carcinoma, cell line, Liver .b 145 to 859 1 to 715 exact     715/1026
(69 %)
3 diff
(99.8 %id)
BM977382 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 145 to 858 732 to 19 exact AAA   714/714
(100 %)
0 diff
(100 %id)
AA356808   .b 146 to 410 1 to 265       265/265
(100 %)
2 diff
(99.3 %id)
BM466723 eye, retinoblastoma .b 146 to 858 1 to 714 exact     714/1136
(62 %)
3 diff
(99.8 %id)
BQ653134 hepatocellular carcinoma, cell line, Liver .b 148 to 862 1 to 715 exact     715/786
(90 %)
1 diff
(99.9 %id)
AF401219   .b 150 to 840 1 to 691 exact     691/691
(100 %)
0 diff
(100 %id)
AW328227 cervix .b 150 to 606 1 to 456   fully sequenced,   456/456
(100 %)
1 diff
(99.8 %id)
CR457238   .b 151 to 608 1 to 458       458/462
(99 %)
1 diff
(99.8 %id)
CD674297 eye, lens .b 153 to 575 1 to 423       423/423
(100 %)
0 diff
(100 %id)
BG116610 duodenal adenocarcinoma, cell line, small intestine .b 153 to 862 1 to 713       713/1041
(68 %)
3 diff
(99.8 %id)
AW189481 serous papillary carcinoma, high grade, 2pooled tumors, uterus .b 155 to 602 1 to 448     Submitted on the opposite strand 448/448
(100 %)
0 diff
(100 %id)
BU507661 leiomyosarcoma, uterus .b 156 to 856 1 to 702       702/702
(100 %)
1 diff
(99.9 %id)
AI090580 heart .b 157 to 605 1 to 449     Submitted on the opposite strand 449/449
(100 %)
0 diff
(100 %id)
AI093501 uterus .b 157 to 630 1 to 474     Submitted on the opposite strand 474/474
(100 %)
0 diff
(100 %id)
AI494229 anaplastic oligodendroglioma, brain .b 157 to 613 1 to 457     Submitted on the opposite strand 457/457
(100 %)
0 diff
(100 %id)
BE395116 endometrium, adenocarcinoma cell line, uterus .b 159 to 817 1 to 660       660/661
(99 %)
2 diff
(99.7 %id)
AI421438 brain, glioblastoma (pooled) .b 164 to 630 1 to 467     Submitted on the opposite strand 467/467
(100 %)
0 diff
(100 %id)
BG491179 amelanotic melanoma, cell line, skin .b 164 to 859 1 to 726       605/746
(81 %)
29 diff
(96.2 %id)
BQ637336 eye, retina .b 165 to 666 1 to 502       502/502
(100 %)
0 diff
(100 %id)
BG116528 duodenal adenocarcinoma, cell line, small intestine .b 165 to 858 1 to 695   AAA   695/695
(100 %)
1 diff
(99.9 %id)
BM553420 amelanotic melanoma, cell line, skin .b 165 to 858 1 to 694   AAA   694/694
(100 %)
0 diff
(100 %id)
BM558351 amelanotic melanoma, cell line, skin .b 165 to 858 1 to 694   AAA   694/694
(100 %)
0 diff
(100 %id)
BM562543 amelanotic melanoma, cell line, skin .b 165 to 858 1 to 695   AAA   695/695
(100 %)
4 diff
(99.5 %id)
CF129536 Chondrosarcoma Lung Metastasis cell lines, lung .b 165 to 841 1 to 677       677/677
(100 %)
0 diff
(100 %id)
TI_154191254   .b 165 to 860 51 to 746   AAA   696/696
(100 %)
2 diff
(99.8 %id)
BM916601 amelanotic melanoma, cell line, skin .b 166 to 852 1 to 688       688/1115
(61 %)
8 diff
(99.3 %id)
BE900692 choriocarcinoma, placenta .b 181 to 836 1 to 655       655/660
(99 %)
1 diff
(99.9 %id)
BP212062 cerebrum .b 191 to 770 1 to 580       580/580
(100 %)
0 diff
(100 %id)
AA093131   .b 194 to 483 1 to 288       288/325
(88 %)
3 diff
(99.1 %id)
BQ427514 leiomyosarcoma, uterus .b 195 to 858 1 to 664   AAA   664/664
(100 %)
0 diff
(100 %id)
R26771 placenta .b 197 to 478 1 to 287     Submitted on the opposite strand 287/294
(97 %)
15 diff
(94.9 %id)
BQ632181 Pancreas, Purified pancreatic islet .b 202 to 766 1 to 565     Submitted on the opposite strand 565/565
(100 %)
0 diff
(100 %id)
BQ631885 Pancreas, Purified pancreatic islet .b 205 to 836 632 to 1     Submitted on the opposite strand 632/632
(100 %)
0 diff
(100 %id)
R77727 placenta .b 207 to 487 1 to 287     Submitted on the opposite strand 287/354
(81 %)
12 diff
(96.7 %id)
AW886805 ovary .b 208 to 476 273 to 6       268/279
(96 %)
4 diff
(98.6 %id)
BY993830   .b 236 to 858 659 to 37   AAA Submitted on the opposite strand 623/623
(100 %)
0 diff
(100 %id)
AA369190 placenta .b 242 to 487 1 to 246       246/259
(94 %)
3 diff
(98.9 %id)
CD107696 brain, Pituitary .b 263 to 858 1 to 596   AAA   596/596
(100 %)
0 diff
(100 %id)
AW177691 colon .b 264 to 408 1 to 145       145/145
(100 %)
1 diff
(99.4 %id)
AW273843 pooled .b 267 to 478 215 to 4       212/223
(95 %)
8 diff
(96.5 %id)
BY994216   .b 271 to 858 624 to 37   AAA Submitted on the opposite strand 588/588
(100 %)
0 diff
(100 %id)
BM972249 lung .b 275 to 858 602 to 19   AAA   584/584
(100 %)
0 diff
(100 %id)
CB529102 Aveolar Macrophage, lung .b 293 to 866 592 to 19   tiling clone, AAA   574/574
(100 %)
0 diff
(100 %id)
BM706659 eye, optic nerve .b 295 to 840 9 to 553   fully sequenced,   545/553
(98 %)
3 diff
(99.5 %id)
EC456119 Prostate .b 300 to 391 1 to 92       92/95
(96 %)
1 diff
(99.0 %id)
EC486986 Prostate .b 305 to 410 6 to 114       110/114
(96 %)
7 diff
(93.9 %id)
AA481676 ovarian tumor, ovary .b 309 to 460 152 to 1     Submitted on the opposite strand 152/154
(98 %)
6 diff
(96.2 %id)
BE395749 endometrium, adenocarcinoma cell line, uterus .b 313 to 858 1 to 546   AAA   546/546
(100 %)
0 diff
(100 %id)
N49816 liver and spleen .b 318 to 865 1 to 548   fully sequenced,   548/548
(100 %)
7 diff
(98.8 %id)
BM693979.
matches multiple genes
eye, Retina Foveal and Macular .b 340 to 823 1 to 484     also hits gene NHP2P1 484/484
(100 %)
0 diff
(100 %id)
BX415059 thymus .b 350 to 827 479 to 1   fully sequenced,   479/479
(100 %)
4 diff
(99.2 %id)
AI816034 brain, frontal lobe .b 350 to 858 520 to 12   fully sequenced, AAA   509/509
(100 %)
1 diff
(99.9 %id)
AW157529 brain, frontal lobe .b 350 to 858 525 to 17   fully sequenced, AAA   509/509
(100 %)
1 diff
(99.9 %id)
BU782700 insulinoma, Pancreas .b 350 to 858 537 to 29   fully sequenced, AAA   509/509
(100 %)
0 diff
(100 %id)
BU737245 eye, fetal eyes .b 350 to 858 525 to 19   fully sequenced, AAA   507/507
(100 %)
4 diff
(99.3 %id)
AA902457 pooled germ cell tumors .b 367 to 487 133 to 13       121/133
(90 %)
0 diff
(100 %id)
DB573150 hypothalamus .b 379 to 858 1 to 480     Submitted on the opposite strand 480/480
(100 %)
2 diff
(99.6 %id)
AI126124   .b 379 to 862 484 to 1       484/484
(100 %)
0 diff
(100 %id)
CK819180 Islets of Langerhans, Pancreas .b 380 to 862 486 to 4       483/511
(94 %)
0 diff
(100 %id)
CF780618 Pooled Chondrosarcoma Tumor cells .b 380 to 858 24 to 502       483/539
(89 %)
7 diff
(98.8 %id)
BM128133 Islets of Langerhans, Pancreas .b 381 to 813 1 to 433       433/433
(100 %)
0 diff
(100 %id)
AA211353   .b 382 to 814 434 to 1       434/455
(95 %)
1 diff
(99.8 %id)
R83117 breast .b 387 to 462 1 to 76       76/76
(100 %)
0 diff
(100 %id)
AA741554 2 pooled tumors (clear cell type), Kidney .b 394 to 861 464 to 1       464/464
(100 %)
10 diff
(97.9 %id)
AI262524 adenocarcinoma, colon .b 399 to 450 1 to 52     Submitted on the opposite strand 52/52
(100 %)
1 diff
(98.1 %id)
DB564835 hypothalamus .b 400 to 858 1 to 459     Submitted on the opposite strand 459/459
(100 %)
0 diff
(100 %id)
AI354949 lung .b 409 to 861 453 to 1       453/453
(100 %)
5 diff
(98.9 %id)
AW299332 Kidney .b 409 to 861 453 to 1       453/453
(100 %)
0 diff
(100 %id)
BM127108 Islets of Langerhans, Pancreas .b 410 to 837 1 to 428   fully sequenced,   428/428
(100 %)
0 diff
(100 %id)
BE219742 carcinoid, lung .b 412 to 858 447 to 1       447/447
(100 %)
0 diff
(100 %id)
F36536 pectoral muscle (after mastectomy) .b 416 to 487 1 to 72       72/80
(90 %)
2 diff
(97.5 %id)
W32965 parathyroid gland, parathyroid tumor .b 424 to 861 439 to 1     Submitted on the opposite strand 439/439
(100 %)
4 diff
(99.1 %id)
EC478098 Prostate .b 433 to 532 1 to 100       100/100
(100 %)
0 diff
(100 %id)
BU598734 mixed (pool of 40 RNAs) .b 443 to 862 1 to 421       421/1036
(40 %)
6 diff
(99.5 %id)
N49710 liver and spleen .b 444 to 865 424 to 1   fully sequenced,   424/424
(100 %)
4 diff
(99.1 %id)
EC527622 Prostate .b 448 to 542 1 to 95       95/95
(100 %)
0 diff
(100 %id)
BQ428240 leiomyosarcoma, uterus .b 451 to 858 1 to 408   AAA   408/408
(100 %)
0 diff
(100 %id)
BM127847 Islets of Langerhans, Pancreas .b 452 to 862 414 to 4       411/414
(99 %)
0 diff
(100 %id)
EC494756 Prostate .b 456 to 559 1 to 104       104/104
(100 %)
0 diff
(100 %id)
DB357849 whole embryo, mainly head .b 456 to 858 403 to 1   fully sequenced,   403/403
(100 %)
0 diff
(100 %id)
CB105404 Liver .b 484 to 862 1 to 379       379/381
(99 %)
1 diff
(99.8 %id)
AA534736 colon .b 488 to 862 377 to 3       375/377
(99 %)
0 diff
(100 %id)
AI870469 anaplastic oligodendroglioma, brain .b 496 to 858 363 to 1       363/363
(100 %)
0 diff
(100 %id)
EC514010 Prostate .b 497 to 591 1 to 95       95/95
(100 %)
0 diff
(100 %id)
AW163093 brain, frontal lobe .b 504 to 865 362 to 1   fully sequenced,   362/362
(100 %)
3 diff
(99.2 %id)
AA723045 heart .b 507 to 858 387 to 36   AAA   352/352
(100 %)
0 diff
(100 %id)
EC490709 Prostate .b 524 to 629 1 to 106       106/106
(100 %)
0 diff
(100 %id)
BE673287 Prostate .b 528 to 858 331 to 1       331/331
(100 %)
0 diff
(100 %id)
EC485985 Prostate .b 532 to 636 1 to 105       105/105
(100 %)
0 diff
(100 %id)
AJ572070 pectoral muscle (after mastectomy) .b 535 to 858 1 to 324   AAA   324/324
(100 %)
0 diff
(100 %id)
EC553050 Prostate .b 535 to 642 1 to 108       108/108
(100 %)
0 diff
(100 %id)
AI093759 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 536 to 862 327 to 2       326/327
(99 %)
0 diff
(100 %id)
EC474829 Prostate .b 543 to 643 1 to 101       101/101
(100 %)
0 diff
(100 %id)
EC567148 Prostate .b 543 to 643 1 to 101       101/101
(100 %)
0 diff
(100 %id)
EC508791 Prostate .b 544 to 643 1 to 100       100/100
(100 %)
0 diff
(100 %id)
EC576473 Prostate .b 544 to 643 1 to 100       100/100
(100 %)
0 diff
(100 %id)
EC514663 Prostate .b 549 to 656 1 to 108       108/108
(100 %)
0 diff
(100 %id)
BG577033 breast, mammary adenocarcinoma, cell line .b 558 to 858 1 to 301   AAA   301/301
(100 %)
0 diff
(100 %id)
AF401217   .b 559 to 858 1 to 300   AAA   300/300
(100 %)
2 diff
(99.4 %id)
EC508868 Prostate .b 563 to 664 1 to 102       102/102
(100 %)
0 diff
(100 %id)
EC505618 Prostate .b 567 to 665 1 to 99       99/99
(100 %)
0 diff
(100 %id)
EC562691 Prostate .b 568 to 668 1 to 101       101/101
(100 %)
0 diff
(100 %id)
AI962465 pooled germ cell tumors .b 570 to 858 289 to 1       289/289
(100 %)
0 diff
(100 %id)
BE552221 pooled germ cell tumors .b 570 to 858 289 to 1       289/289
(100 %)
0 diff
(100 %id)
BF592770 pooled germ cell tumors .b 570 to 858 289 to 1       289/289
(100 %)
0 diff
(100 %id)
EC490694 Prostate .b 573 to 673 1 to 101       101/101
(100 %)
0 diff
(100 %id)
AW328228 cervix .b 576 to 858 311 to 29   fully sequenced, AAA   283/283
(100 %)
1 diff
(99.7 %id)
EC569519 Prostate .b 581 to 682 1 to 102       102/102
(100 %)
0 diff
(100 %id)
EC538863 Prostate .b 585 to 685 1 to 101       101/101
(100 %)
0 diff
(100 %id)
EC568636 Prostate .b 585 to 685 1 to 101       101/101
(100 %)
0 diff
(100 %id)
EC479781 Prostate .b 586 to 685 1 to 100       100/100
(100 %)
0 diff
(100 %id)
EC535193 Prostate .b 586 to 685 1 to 100       100/100
(100 %)
0 diff
(100 %id)
AI014544 pooled .b 588 to 858 271 to 1       271/271
(100 %)
0 diff
(100 %id)
R82933 breast .b 591 to 850 276 to 14       263/276
(95 %)
5 diff
(98.2 %id)
EC572022 Prostate .b 610 to 706 1 to 97       97/97
(100 %)
0 diff
(100 %id)
EC495131 Prostate .b 616 to 713 1 to 98       98/98
(100 %)
0 diff
(100 %id)
EC538183 Prostate .b 616 to 713 1 to 98       98/98
(100 %)
0 diff
(100 %id)
EC483657 Prostate .b 617 to 712 1 to 96       96/96
(100 %)
0 diff
(100 %id)
BM672825 eye, optic nerve .b 620 to 858 257 to 19   fully sequenced, AAA   239/239
(100 %)
2 diff
(99.2 %id)
AA730887 Ewing's sarcoma .b 621 to 868 1 to 246       246/249
(98 %)
12 diff
(95.2 %id)
AA977373 2 pooled tumors (clear cell type), Kidney .b 643 to 861 219 to 1       219/219
(100 %)
0 diff
(100 %id)
AA554451 colon, tumor .b 644 to 861 218 to 1       218/218
(100 %)
0 diff
(100 %id)
AA714112 synovial sarcoma .b 657 to 862 207 to 2       206/207
(99 %)
0 diff
(100 %id)
EC484043 Prostate .b 677 to 779 1 to 103       103/103
(100 %)
0 diff
(100 %id)
BM126798 Islets of Langerhans, Pancreas .b 697 to 860 164 to 1   fully sequenced,   164/164
(100 %)
0 diff
(100 %id)
AA627891 normal prostate, Prostate .b 698 to 858 161 to 1       161/161
(100 %)
0 diff
(100 %id)
BG108784 retina, Retinal Pigment Epithelium sheets .b 709 to 862 1 to 155       155/156
(99 %)
4 diff
(97.5 %id)
CD671998 eye, Iris .b 748 to 866 139 to 20   fully sequenced,   120/139
(86 %)
5 diff
(96.5 %id)
BG272417 head/neck, nasopharyngeal carcinoma .b 761 to 861 101 to 1       101/126
(80 %)
1 diff
(99.3 %id)
DB015218 esophageal, tumor tissue .c -9 to 464 2 to 477 R22P T23H Y24L Q25P E26G ... tiling clone, capped   476/476
(100 %)
2 diff
(99.6 %id)
NM_001034833.1   .d 1 to 745 1 to 745 exact RefSeq, AAA   745/745
(100 %)
0 diff
(100 %id)
AA305085 colon .d 74 to 594 1 to 518 Q36X L38W A39L S40L R41A ... tiling clone,   518/518
(100 %)
4 diff
(99.3 %id)
BP353896   .d 76 to 651 1 to 576 exact     576/581
(99 %)
1 diff
(99.9 %id)
BM913344 amelanotic melanoma, cell line, skin .d 101 to 745 1 to 646 exact AAA   646/646
(100 %)
1 diff
(99.9 %id)
AW160849 brain, frontal lobe .d 127 to 625 1 to 499 L28Q     499/499
(100 %)
1 diff
(99.8 %id)
AW974510   .d 132 to 715 7 to 590 exact     584/590
(98 %)
9 diff
(98.5 %id)
BI755857 brain .d 132 to 730 1 to 599 exact     599/599
(100 %)
0 diff
(100 %id)
TI_57216506   .d 132 to 730 31 to 629 exact     599/629
(95 %)
6 diff
(99.1 %id)
CR995652 T-Lymphocytes .d 160 to 745 1 to 586   AAA   586/586
(100 %)
0 diff
(100 %id)
CR747400 leiomyosarcoma, uterus .d 165 to 657 12 to 504       493/504
(97 %)
6 diff
(98.9 %id)
BM470962 leiomyosarcoma, uterus .d 165 to 745 1 to 581   AAA   581/581
(100 %)
0 diff
(100 %id)
AA932851 carcinoid, lung .d 190 to 376 1 to 182     Submitted on the opposite strand 182/182
(100 %)
6 diff
(96.8 %id)
BE256866 eye, retinoblastoma .d 195 to 752 1 to 558   tiling clone,   558/558
(100 %)
1 diff
(99.9 %id)
BE258452 eye, retinoblastoma .d 195 to 750 1 to 556   tiling clone,   556/556
(100 %)
0 diff
(100 %id)
AA766048 germinal center B cell .d 203 to 509 1 to 305     Submitted on the opposite strand 305/305
(100 %)
6 diff
(98.1 %id)
AA649192 germinal center B cell .d 223 to 640 1 to 416     Submitted on the opposite strand 416/416
(100 %)
20 diff
(95.2 %id)
AA836982 Kidney, kidney tumor .d 336 to 749 416 to 3       414/416
(99 %)
0 diff
(100 %id)
AI310800 2 pooled tumors (clear cell type), Kidney .d 359 to 465 107 to 1       107/107
(100 %)
0 diff
(100 %id)
DA291734 hippocampus .e 1 to 565 2 to 566 exact tiling clone, capped   565/565
(100 %)
0 diff
(100 %id)
DB030898 testis .f 1 to 551 2 to 552 exact tiling clone, capped   551/551
(100 %)
0 diff
(100 %id)
AL562820 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .f 550 to 1154 1 to 601   tiling clone,   601/820
(73 %)
76 diff
(90.8 %id)
DB508070.
matches multiple genes
testis .f 1091 to 1453 370 to 5     also hits gene RMND5B 366/370
(98 %)
0 diff
(100 %id)
DB521293.
matches multiple genes
testis .f 1091 to 1523 434 to 1   tiling clone, also hits gene RMND5B 434/434
(100 %)
1 diff
(99.8 %id)
EC554647 Prostate .f 1195 to 1300 1 to 104       104/105
(99 %)
4 diff
(96.2 %id)
AI333778 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 1206 to 1619 415 to 3   tiling clone,   413/415
(99 %)
0 diff
(100 %id)
BM663976.
matches multiple genes
eye, Retina Foveal and Macular P1.a-u 400 to 766 367 to 1     also hits gene NHP2P1 367/367
(100 %)
10 diff
(97.3 %id)
366 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI