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Gene NOC3LTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
138 supporting clones for gene NOC3L back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AA316901 colon .b 2494 to 2970 1 to 477       477/477
(100 %)
0 diff
(100 %id)
AA318529 Spleen .b 2728 to 3060 1 to 333       333/333
(100 %)
2 diff
(99.4 %id)
AA384580 thyroid gland .a 2766 to 3105 1 to 342       342/342
(100 %)
6 diff
(98.3 %id)
AB077992   .a 114 to 2563 1 to 2450 exact     2450/2450
(100 %)
1 diff
(100.0 %id)
AK022882   .a 1090 to 3489 1 to 2400   available from FLJ,   2400/2401
(99 %)
2 diff
(100.0 %id)
AK026953   .a 1390 to 3486 1 to 2097   available from FLJ, AAA   2097/2097
(100 %)
0 diff
(100 %id)
AK091246 tongue, tumor tissue .a 44 to 3037 1 to 2990 N574L D576H P577* tiling clone, available from FLJ,   2990/2990
(100 %)
4 diff
(99.9 %id)
AK292520 testis .a 19 to 2679 1 to 2661 K23E     2661/2661
(100 %)
1 diff
(100.0 %id)
AK302028 testis .b 1631 to 3345 1 to 1715   tiling clone,   1715/1715
(100 %)
2 diff
(99.9 %id)
AW966478   .a 2767 to 3380 1 to 617       617/620
(99 %)
18 diff
(97.1 %id)
AW976854   .b 1661 to 2200 542 to 3     Submitted on the opposite strand 540/542
(99 %)
0 diff
(100 %id)
AX746873   .a 44 to 3037 1 to 2990 N574L D576H P577*     2990/2990
(100 %)
4 diff
(99.9 %id)
BC049850 Uterus, leiomyosarcoma .a 51 to 3486 1 to 3436 exact tiling clone, available from MGC, AAA   3436/3436
(100 %)
1 diff
(100.0 %id)
BE173287 head_neck .b 1681 to 1989 190 to 498       309/519
(59 %)
8 diff
(98.5 %id)
BE185321 head_neck .a 110 to 456 11 to 357       347/357
(97 %)
4 diff
(98.9 %id)
BF327590 breast_normal .a 2264 to 2487 221 to 1       221/221
(100 %)
4 diff
(98.2 %id)
BF373571 prostate_tumor .a 1997 to 2495 1 to 506       506/511
(99 %)
25 diff
(95.2 %id)
BG203024   .a 704 to 1049 1 to 346       346/346
(100 %)
1 diff
(99.8 %id)
BQ336002 marrow .b 1890 to 2264 29 to 397       369/397
(92 %)
4 diff
(99.0 %id)
DA135191 alzheimer cortex .a 897 to 1458 2 to 563   capped   562/563
(99 %)
2 diff
(99.7 %id)
DA370502 thalamus .a 899 to 1464 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA416277 thalamus .d 1 to 561 2 to 562 exact tiling clone, capped   561/561
(100 %)
0 diff
(100 %id)
BX111035 Prostate .a 2670 to 3074 1 to 405       405/405
(100 %)
5 diff
(98.8 %id)
BX118492 pooled germ cell tumors .h-u 1 to 481 1 to 481 exact tiling clone,   481/481
(100 %)
1 diff
(99.8 %id)
BP202940 coronary artery .b 2515 to 3085 1 to 571   tiling clone,   571/571
(100 %)
0 diff
(100 %id)
CD700454 normal nasopharynx .i 1 to 348 23 to 370 S12* tiling clone,   348/370
(94 %)
1 diff
(99.8 %id)
CF272667   .a 328 to 986 660 to 1     Submitted on the opposite strand 660/660
(100 %)
12 diff
(98.2 %id)
CN333019 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 1 to 699 1 to 699 exact tiling clone,   699/699
(100 %)
4 diff
(99.5 %id)
CN333020 embryonic stem cells, DMSO-treated H9 cellline .b 2220 to 2975 1 to 758       758/758
(100 %)
3 diff
(99.7 %id)
CN333021 embryonic stem cells, DMSO-treated H9 cellline .a 578 to 828 1 to 251       251/251
(100 %)
1 diff
(99.7 %id)
CA397642 eye, RPE/choroid .a 1940 to 2494 1 to 553       553/553
(100 %)
2 diff
(99.7 %id)
DA446429 tongue, tumor tissue .a 45 to 619 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DB313993 tongue, tumor tissue .a 2479 to 3037 559 to 1       559/559
(100 %)
0 diff
(100 %id)
DA458288 tongue, tumor tissue .a 35 to 597 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA461574 tongue, tumor tissue .a 68 to 652 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
BX505710   .a 1 to 637 1 to 639   tiling clone,   639/639
(100 %)
5 diff
(99.3 %id)
BX501636 Liver .f 1 to 553 1 to 553   tiling clone,   553/553
(100 %)
3 diff
(99.5 %id)
BX497418 Liver .a 10 to 648 1 to 639       639/641
(99 %)
2 diff
(99.7 %id)
DW442703 Liver .a 55 to 270 18 to 233       216/233
(92 %)
0 diff
(100 %id)
FN064326 breast carcinoma .a 2746 to 2864 1 to 121       121/121
(100 %)
3 diff
(97.6 %id)
FN072948 breast carcinoma .a 2623 to 2691 1 to 69       69/70
(98 %)
1 diff
(98.6 %id)
FN135307 breast carcinoma .a 3379 to 3483 1 to 105       105/105
(100 %)
0 diff
(100 %id)
GD137108   .a 2905 to 3048 1 to 143       143/143
(100 %)
4 diff
(97.3 %id)
DB475825 hippocampus .j 1 to 314 1 to 312 exact tiling clone,   312/319
(97 %)
3 diff
(99.1 %id)
DB544636 hippocampus .a 3057 to 3490 1 to 434     Submitted on the opposite strand 434/434
(100 %)
1 diff
(99.8 %id)
BP249511 Kidney .a 242 to 824 1 to 581       581/581
(100 %)
4 diff
(99.4 %id)
BP258911 heart .a 2 to 570 1 to 568       568/568
(100 %)
13 diff
(97.8 %id)
BP259887 heart .b 2138 to 2717 1 to 579   tiling clone,   579/581
(99 %)
23 diff
(96.1 %id)
R73078 placenta .a 3088 to 3464 394 to 1       394/426
(92 %)
15 diff
(96.5 %id)
AA131255 uterus .a 2588 to 3037 447 to 1   fully sequenced,   447/447
(100 %)
8 diff
(98.3 %id)
AA131345 uterus .a 2275 to 2618 1 to 344   fully sequenced,   344/344
(100 %)
0 diff
(100 %id)
AA213856 germinal center B cell .a 863 to 1016 1 to 154       154/155
(99 %)
1 diff
(99.4 %id)
AA213857 germinal center B cell .a 1357 to 1488 132 to 1       132/133
(99 %)
0 diff
(100 %id)
AA653544   .a 3153 to 3490 338 to 1       338/338
(100 %)
1 diff
(99.8 %id)
AA761217 germinal center B cell .b 1877 to 2211 336 to 2       335/336
(99 %)
0 diff
(100 %id)
AA864830 Kidney, kidney tumor .a 2987 to 3492 507 to 1       507/507
(100 %)
2 diff
(99.7 %id)
AA993300   .a 2995 to 3488 499 to 6       494/499
(98 %)
0 diff
(100 %id)
AI017605 pooled .a 2572 to 3037 466 to 1       466/466
(100 %)
1 diff
(99.8 %id)
AI092233 heart .a 3084 to 3491 408 to 1       408/408
(100 %)
0 diff
(100 %id)
AI223187 pooled .a 3161 to 3491 331 to 1       331/334
(99 %)
3 diff
(99.2 %id)
AI263026 Kidney .a 3105 to 3492 393 to 6       388/393
(98 %)
0 diff
(100 %id)
AI253607 Prostate .a 3022 to 3491 469 to 1       469/469
(100 %)
1 diff
(99.8 %id)
AI377804 pooled .a 3000 to 3489 497 to 8       490/497
(98 %)
0 diff
(100 %id)
AI632144 pooled germ cell tumors .a 2995 to 3491 511 to 15   AAA   497/497
(100 %)
0 diff
(100 %id)
AI638158 pooled germ cell tumors .a 2948 to 3491 544 to 1       544/544
(100 %)
1 diff
(99.9 %id)
AI745595 Prostate .a 2917 to 3486 587 to 18   AAA   570/570
(100 %)
0 diff
(100 %id)
AI806774 pooled .a 3025 to 3492 470 to 3       468/470
(99 %)
0 diff
(100 %id)
AI765495 2 pooled tumors (clear cell type), Kidney .a 2995 to 3491 511 to 15       497/511
(97 %)
0 diff
(100 %id)
AI972790 Prostate .a 2950 to 3444 506 to 12       495/506
(97 %)
0 diff
(100 %id)
AI985958 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 2527 to 3039 515 to 1       515/515
(100 %)
6 diff
(98.9 %id)
AI991497 pooled germ cell tumors .a 3114 to 3489 380 to 5       376/380
(98 %)
0 diff
(100 %id)
AW118400 brain, tumor, 5 pooled (see description) .a 2765 to 3037 274 to 1       274/274
(100 %)
1 diff
(99.7 %id)
AW237133 pooled germ cell tumors .a 2975 to 3482 517 to 10       508/517
(98 %)
0 diff
(100 %id)
AW014441   .a 2997 to 3489 510 to 18   AAA   493/493
(100 %)
1 diff
(99.8 %id)
AW473886 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 3103 to 3490 396 to 9       388/396
(97 %)
0 diff
(100 %id)
AW664079 pooled .a 3033 to 3489 463 to 7       457/463
(98 %)
0 diff
(100 %id)
BE546585 cervical carcinoma cell line, cervix .a 1925 to 2720 1 to 785       785/802
(97 %)
30 diff
(96.3 %id)
BE565647 bladder, carcinoma, cell line .a 2491 to 3048 1 to 550       550/715
(76 %)
15 diff
(98.0 %id)
BF034329 adenocarcinoma, ovary .a 1944 to 2667 1 to 723       723/727
(99 %)
14 diff
(98.1 %id)
BE875056 large cell carcinoma, undifferentiated, lung .b 2162 to 2698 1 to 537       537/537
(100 %)
1 diff
(99.9 %id)
BF382565 brain, primitive neuroectoderm .a 1927 to 2478 1 to 553       553/812
(68 %)
13 diff
(98.4 %id)
BF217188 brain, glioblastoma .b 2561 to 3128 1 to 572       572/903
(63 %)
14 diff
(98.5 %id)
BF701634 brain, primitive neuroectoderm .a 2278 to 2918 1 to 640       640/789
(81 %)
12 diff
(98.5 %id)
BG111912 Bone, osteosarcoma, cell line .a 2640 to 3298 13 to 674       662/970
(68 %)
14 diff
(98.6 %id)
BG114088 Bone, osteosarcoma, cell line .a 478 to 1094 1 to 640       525/948
(55 %)
27 diff
(97.2 %id)
BG035472 adenocarcinoma, cell line, Liver .a 1781 to 2563 1 to 786       786/980
(80 %)
50 diff
(94.9 %id)
BG401576 Kidney .b 2244 to 2813 1 to 569       571/814
(70 %)
14 diff
(98.3 %id)
BG431682 Kidney .a 2199 to 2890 1 to 693       693/693
(100 %)
4 diff
(99.5 %id)
BG533082 embryonal carcinoma, testis .a 2459 to 3287 1 to 834       834/834
(100 %)
21 diff
(97.5 %id)
BC030999 placenta .b 2 to 2191 1 to 2190   tiling clone, available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 2190/2213
(98 %)
2 diff
(100.0 %id)
BG573738 placenta .b 1 to 564 1 to 572   tiling clone, available from MGC,   572/714
(80 %)
19 diff
(97.4 %id)
BG610690 adenocarcinoma, Prostate .a 2389 to 3159 1 to 760       760/770
(98 %)
15 diff
(98.1 %id)
BG778960 adenocarcinoma, Prostate .b 2404 to 3085 1 to 682       680/682
(99 %)
6 diff
(99.2 %id)
BI460073 testis .g 1 to 634 9 to 643 L64W E65R N66T P67Q K68R ... tiling clone,   643/643
(100 %)
11 diff
(98.3 %id)
BM458241 leiomyosarcoma, uterus .b 2218 to 3141 1 to 924       924/1045
(88 %)
16 diff
(98.5 %id)
BM552118 leiomyosarcoma, uterus .a 51 to 834 29 to 814       786/1053
(74 %)
13 diff
(98.8 %id)
BM802539 eye, retinoblastoma .a 1758 to 2547 1 to 805       805/987
(81 %)
22 diff
(97.8 %id)
BU164344 large cell carcinoma, lung .a 2972 to 3486 12 to 526       515/607
(84 %)
1 diff
(99.9 %id)
BQ428826 testis .a 2551 to 3227 1 to 683       683/812
(84 %)
14 diff
(98.3 %id)
BU195307 melanotic melanoma, skin .a 1988 to 2800 1 to 820       820/887
(92 %)
11 diff
(98.8 %id)
BQ922101 leiomyosarcoma, uterus .a 644 to 1575 1 to 932       930/932
(99 %)
16 diff
(98.3 %id)
BU507006 leiomyosarcoma, uterus .a 2139 to 2980 1 to 862       862/942
(91 %)
40 diff
(95.8 %id)
BU509686 leiomyosarcoma, uterus .b 2374 to 3042 1 to 672       672/925
(72 %)
6 diff
(99.4 %id)
CA866549 Pancreas, Purified pancreatic islet .b 2387 to 2815 1 to 429       429/439
(97 %)
1 diff
(99.8 %id)
CA866815 Pancreas, Purified pancreatic islet .a 2636 to 3036 401 to 1       401/401
(100 %)
0 diff
(100 %id)
CK903075 Pancreas, Purified pancreatic islet .b 2410 to 2985 1 to 576     Submitted on the opposite strand 576/576
(100 %)
3 diff
(99.5 %id)
BU567454 testis .b 2375 to 3136 1 to 768       768/786
(97 %)
18 diff
(97.8 %id)
BU941047 mixed (pool of 40 RNAs) .a 2312 to 3089 1 to 781       781/781
(100 %)
12 diff
(98.5 %id)
CD242203 Blood vessels - aorta, basilar and artery .a 2717 to 3469 1 to 758       758/759
(99 %)
21 diff
(97.3 %id)
CD359334 testis .a 2472 to 3125 1 to 660       660/894
(73 %)
26 diff
(97.1 %id)
CD638913 pooled .a 1793 to 2469 1 to 669       669/698
(95 %)
13 diff
(98.2 %id)
CD643823 Embryonic Stem cells .a 44 to 832 1 to 789       789/846
(93 %)
15 diff
(98.3 %id)
CK002044 brain/CNS, Bulk tissue from Human Spinal cord .a 26 to 667 1 to 641       641/641
(100 %)
5 diff
(99.3 %id)
DA613574   .a 68 to 646 2 to 580   capped   579/587
(98 %)
0 diff
(100 %id)
DA668060 esophagus .a 1864 to 2422 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA669298 esophagus .a 2923 to 3505 2 to 586   capped   585/585
(100 %)
4 diff
(99.4 %id)
NM_022451.9   .a 51 to 3486 1 to 3436 exact RefSeq, AAA   3436/3436
(100 %)
1 diff
(100.0 %id)
AU127264   .a 1091 to 1783 2 to 694   capped   693/759
(91 %)
12 diff
(98.5 %id)
AU149909   .a 3229 to 3488 262 to 3       260/262
(99 %)
0 diff
(100 %id)
AU128102   .a 1090 to 1543 2 to 457   capped   454/456
(99 %)
7 diff
(98.5 %id)
AU150418   .a 3032 to 3489 459 to 2       458/459
(99 %)
0 diff
(100 %id)
D20313   .a 3276 to 3492 1 to 217     Submitted on the opposite strand 217/219
(99 %)
2 diff
(99.1 %id)
BM788053 stomach .a 1865 to 2562 1 to 698       698/698
(100 %)
1 diff
(99.9 %id)
BM766990 stomach .a 2940 to 3482 1 to 543       543/548
(99 %)
2 diff
(99.7 %id)
DN989757 brain, whole brain .a 41 to 668 1 to 628       628/628
(100 %)
5 diff
(99.3 %id)
DB036933 testis .b 1632 to 2210 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DB081447 testis .a 20 to 562 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
DB099464 testis .a 19 to 616 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
TI_149306573   .b 3328 to 3682 443 to 89   tiling clone, AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 355/355
(100 %)
1 diff
(99.8 %id)
TI_149314139   .a 2663 to 3490 910 to 90   AAA   821/952
(86 %)
15 diff
(98.5 %id)
DB212945 trachea .a 20 to 391 2 to 373   capped   372/372
(100 %)
0 diff
(100 %id)
DB227351 trachea .a 68 to 638 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB232297 trachea .f 239 to 830 2 to 593 exact tiling clone, capped   592/592
(100 %)
0 diff
(100 %id)
DB235664 trachea .e 1 to 564 2 to 565 C122R tiling clone, capped   564/564
(100 %)
1 diff
(99.9 %id)
BQ013713 placenta .a 3019 to 3491 489 to 18   AAA   472/472
(100 %)
7 diff
(98.6 %id)
BQ011935 placenta .a 2923 to 3486 582 to 19   AAA   564/564
(100 %)
0 diff
(100 %id)
CB321655 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 2805 to 3490 704 to 19   AAA   686/686
(100 %)
1 diff
(99.9 %id)
BQ773252 Chondrosarcoma Cell line .a 2776 to 3489 732 to 19   AAA   714/714
(100 %)
1 diff
(99.9 %id)
BU617813 cell lines, Chondrosarcoma .a 2764 to 3489 742 to 19   AAA   724/727
(99 %)
3 diff
(99.6 %id)
CA430722 cell lines, Enchondroma .a 2913 to 3490 596 to 19   AAA   578/578
(100 %)
0 diff
(100 %id)
BU622598 cell lines, Chondrosarcoma .a 2795 to 3491 715 to 19   AAA   697/697
(100 %)
1 diff
(99.9 %id)
CA309428 Alveolar Macrophage, lung .a 2845 to 3491 665 to 19   AAA   647/647
(100 %)
0 diff
(100 %id)
DB277520 uterus .a 37 to 487 2 to 452   capped   451/451
(100 %)
0 diff
(100 %id)
CK002044 brain/CNS, Bulk tissue from Human Spinal cord .a 26 to 667 1 to 641       641/641
(100 %)
5 diff
(99.3 %id)
DA613574   .a 68 to 646 2 to 580   capped   579/587
(98 %)
0 diff
(100 %id)
DA668060 NESOP2000778 NOC3L.aAug10 2422 560 NESOP2000778     559 0
DA669298 NESOP2002229 NOC3L.aAug10 3505 586 NESOP2002229     585 4
NM_022451.9 NM_022451 NOC3L.aAug10 3486 3436 NM_022451     3436 1
AU127264 NT2RP2000904 NOC3L.aAug10 1783 694 NT2RP2000904     693 12
AU149909 NT2RP2000904 NOC3L.aAug10 3488 3 NT2RP2000904     260 0
AU128102 NT2RP2002736 NOC3L.aAug10 1543 457 NT2RP2002736     454 7
AU150418 NT2RP2002736 NOC3L.aAug10 3489 2 NT2RP2002736     458 0
D20313 pm2219 NOC3L.aAug10 3492 217 pm2219 Inverted   217 2
BM788053 S10SNU1-21-C09 NOC3L.aAug10 2562 698 S10SNU1-21-C09     698 1
BM766990 S14K402-2-A07 NOC3L.aAug10 3482 543 S14K402-2-A07     543 2
DN989757 TC112516 NOC3L.aAug10 668 628 TC112516     628 5
DN989757 TC112516 NOC3L.aAug10 668 628 TC112516     628 5
DB036933 TESTI2022800 NOC3L.bAug10 2210 580 TESTI2022800     579 0
DB081447 TESTI4027429 NOC3L.aAug10 562 544 TESTI4027429     543 1
DB099464 TESTI4051166 NOC3L.aAug10 616 599 TESTI4051166     598 0
TI_149306573 TI_149306573 NOC3L.bAug10 3682 89 TI_149306573   Anomalous_clone 355 1
TI_149314139 TI_149314139 NOC3L.aAug10 3490 90 TI_149314139     821 15
DB212945 TRACH3000864 NOC3L.aAug10 391 373 TRACH3000864     372 0
DB227351 TRACH3019827 NOC3L.aAug10 638 572 TRACH3019827     571 0
DB232297 TRACH3026164 NOC3L.fAug10 830 593 TRACH3026164     592 0
DB235664 TRACH3030686 NOC3L.eAug10 564 565 TRACH3030686     564 1
BQ013713 UI-1-BC1p-ala-g-07-0-UI NOC3L.aAug10 3491 18 UI-1-BC1p-ala-g-07-0-UI     472 7
BQ011935 UI-1-BC1p-ati-c-03-0-UI NOC3L.aAug10 3486 19 UI-1-BC1p-ati-c-03-0-UI     564 0
CB321655 UI-CF-EN1-aeg-j-08-0-UI NOC3L.aAug10 3490 19 UI-CF-EN1-aeg-j-08-0-UI     686 1
CB321655 UI-CF-EN1-aeg-j-08-0-UI NOC3L.aAug10 3490 19 UI-CF-EN1-aeg-j-08-0-UI     686 1
BQ773252 UI-H-FE0-bbx-g-04-0-UI NOC3L.aAug10 3489 19 UI-H-FE0-bbx-g-04-0-UI     714 1
BU617813 UI-H-FE1-bez-f-07-0-UI NOC3L.aAug10 3489 19 UI-H-FE1-bez-f-07-0-UI     724 3
BU617813 UI-H-FE1-bez-f-07-0-UI NOC3L.aAug10 3489 19 UI-H-FE1-bez-f-07-0-UI     724 3
CA430722 UI-H-FG1-bgf-c-05-0-UI NOC3L.aAug10 3490 19 UI-H-FG1-bgf-c-05-0-UI     578 0
CA430722 UI-H-FG1-bgf-c-05-0-UI NOC3L.aAug10 3490 19 UI-H-FG1-bgf-c-05-0-UI     578 0
BU622598 UI-H-FL1-bgc-b-17-0-UI NOC3L.aAug10 3491 19 UI-H-FL1-bgc-b-17-0-UI     697 1
BU622598 UI-H-FL1-bgc-b-17-0-UI NOC3L.aAug10 3491 19 UI-H-FL1-bgc-b-17-0-UI     697 1
CA309428 UI-H-FT1-bif-i-21-0-UI NOC3L.aAug10 3491 19 UI-H-FT1-bif-i-21-0-UI     647 0
CA309428 UI-H-FT1-bif-i-21-0-UI NOC3L.aAug10 3491 19 UI-H-FT1-bif-i-21-0-UI     647 0
DB277520 UTERU3003202 NOC3L.aAug10 487 452 UTERU3003202     451 0
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i, .j Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI