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Gene NFATC1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
252 supporting clones for gene NFATC1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_172387.1   .a 1 to 4600 5 to 4604 exact RefSeq, AAA   4604/4604
(100 %)
0 diff
(100 %id)
U80918   .a 7 to 4600 1 to 4600   tiling clone, AAA   4600/4600
(100 %)
7 diff
(99.9 %id)
EU887560   .a 63 to 2855 1 to 2793   tiling clone,   2793/2793
(100 %)
0 diff
(100 %id)
EU887559   .b 1 to 2832 1 to 2832 exact tiling clone,   2832/2832
(100 %)
0 diff
(100 %id)
NM_172389.1   .c 1 to 4293 5 to 4297 exact RefSeq, AAA   4297/4297
(100 %)
0 diff
(100 %id)
U59736   .c 1 to 2923 14 to 2935 G239S tiling clone,   2926/2935
(99 %)
12 diff
(99.6 %id)
X99829   .c 1 to 148 1 to 154       154/154
(100 %)
6 diff
(96.2 %id)
CN355585 embryonic stem cells, cell lines H1, H7, andH9 .c 3 to 390 1 to 394       394/394
(100 %)
4 diff
(99.0 %id)
EU887564   .c 63 to 4294 1 to 4232   tiling clone,   4232/4232
(100 %)
0 diff
(100 %id)
CN355584 embryonic stem cells, cell lines H1, H7, andH9 .c 123 to 723 1 to 601       601/601
(100 %)
0 diff
(100 %id)
NM_006162.3   .d 1 to 4723 1 to 4723 exact RefSeq, AAA   4723/4723
(100 %)
0 diff
(100 %id)
U80917   .d 85 to 4723 1 to 4639 exact tiling clone, AAA   4639/4639
(100 %)
5 diff
(99.9 %id)
DB123641 thymus .d 160 to 758 2 to 600   capped   599/599
(100 %)
1 diff
(99.9 %id)
DN999742   .d 185 to 799 8 to 622       615/622
(98 %)
5 diff
(99.2 %id)
TI_1241108705   .d 360 to 1392 38 to 1066       1029/1220
(84 %)
15 diff
(98.8 %id)
TI_1241112829   .d 360 to 1573 52 to 1249       1198/1250
(95 %)
34 diff
(97.3 %id)
TI_1242418980   .d 360 to 1310 65 to 1014     Submitted on the opposite strand 950/1014
(93 %)
13 diff
(98.8 %id)
TI_2194575906   .d 360 to 1510 60 to 1205     Submitted on the opposite strand 1146/1215
(94 %)
32 diff
(97.4 %id)
TI_2194575912   .d 360 to 1439 56 to 1141     Submitted on the opposite strand 1086/1251
(86 %)
17 diff
(98.7 %id)
TI_2194576500   .d 360 to 1463 61 to 1151     Submitted on the opposite strand 1091/1286
(84 %)
20 diff
(98.5 %id)
AI494341 B-cell, chronic lymphotic leukemia .d 408 to 915 1 to 507     Submitted on the opposite strand 507/507
(100 %)
5 diff
(99.1 %id)
EU887563   .d 454 to 4724 1 to 4271 exact tiling clone,   4271/4271
(100 %)
0 diff
(100 %id)
BM918661 pooled pancreas and spleen .d 454 to 1343 8 to 903       896/1163
(77 %)
23 diff
(98.1 %id)
AW500400 lymph .d 496 to 963 1 to 468       468/468
(100 %)
5 diff
(99.0 %id)
TI_154154575   .d 502 to 1164 79 to 743       665/665
(100 %)
15 diff
(97.8 %id)
AI797935 pooled .d 579 to 1078 12 to 510     Submitted on the opposite strand 499/513
(97 %)
13 diff
(97.5 %id)
TI_1242417136   .d 654 to 1679 1038 to 20       1019/1272
(80 %)
0 diff
(100 %id)
BG340917 B-cells, primary B-cells from tonsils (cell line) .d 746 to 1517 1 to 752       752/853
(88 %)
30 diff
(96.5 %id)
BG982945 colon_normal .d 783 to 1281 27 to 509       483/509
(94 %)
6 diff
(98.9 %id)
BQ300246 bladder_tumor .d 840 to 1059 225 to 6       220/225
(97 %)
0 diff
(100 %id)
CR981226 T-Lymphocytes .d 853 to 1731 1 to 884       884/884
(100 %)
6 diff
(99.4 %id)
TI_2194577733   .d 862 to 1969 1 to 1105       1105/1258
(87 %)
19 diff
(98.5 %id)
TI_1241109399   .d 865 to 1992 1 to 1125       1125/1255
(89 %)
13 diff
(99.0 %id)
AW500065 lymph .d 879 to 1372 8 to 501       494/501
(98 %)
6 diff
(98.9 %id)
TI_154154169   .d 879 to 1518 80 to 715       636/639
(99 %)
10 diff
(98.5 %id)
CF137379 lymph .d 937 to 1210 1 to 274       274/274
(100 %)
3 diff
(99.0 %id)
TI_154166862   .d 940 to 1488 77 to 624       548/550
(99 %)
15 diff
(97.3 %id)
TI_1241110799   .d 953 to 2185 1230 to 4       1227/1244
(98 %)
24 diff
(98.1 %id)
TI_1241110409   .d 1003 to 2179 1191 to 13       1179/1255
(93 %)
21 diff
(98.4 %id)
TI_1241110397   .d 1037 to 2189 1161 to 1       1161/1284
(90 %)
27 diff
(97.9 %id)
TI_1242417148   .d 1093 to 2184 1083 to 2       1082/1233
(87 %)
17 diff
(98.7 %id)
BQ710263 Spleen .d 1224 to 1800 111 to 691       581/1024
(56 %)
20 diff
(98.1 %id)
TI_1241109395   .d 1264 to 2407 1 to 1137       1137/1250
(90 %)
18 diff
(98.6 %id)
AW401624 lymph .d 1316 to 1494 194 to 16     Submitted on the opposite strand 179/196
(91 %)
0 diff
(100 %id)
AW027545 thymus, pooled .d 1336 to 2120 778 to 1       778/793
(98 %)
35 diff
(95.6 %id)
AI830717 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .d 1447 to 2120 674 to 1       674/674
(100 %)
21 diff
(96.9 %id)
TI_153988273   .d 1586 to 2180 649 to 55       595/649
(91 %)
2 diff
(99.7 %id)
AW204551   .d 1635 to 2174 540 to 1       540/540
(100 %)
1 diff
(99.9 %id)
AW134810   .d 1640 to 2174 534 to 1       534/536
(99 %)
10 diff
(98.2 %id)
NM_172390.1   .e 1 to 3140 1 to 3140 exact RefSeq,   3140/3140
(100 %)
0 diff
(100 %id)
AK292641 thymus .e 159 to 2964 1 to 2806 P68T tiling clone,   2806/2806
(100 %)
5 diff
(99.9 %id)
U08015   .e 222 to 2957 8 to 2743 R235Q     2736/2743
(99 %)
8 diff
(99.8 %id)
BC104753 Brain, cerebellum, PCR rescued clones .e 360 to 2639 1 to 2280 exact     2280/2280
(100 %)
2 diff
(100.0 %id)
BC112243 Brain, cerebellum, PCR rescued clones .e 360 to 2639 1 to 2280 exact     2280/2280
(100 %)
2 diff
(100.0 %id)
EU887565   .e 454 to 2964 1 to 2511 exact tiling clone,   2511/2511
(100 %)
0 diff
(100 %id)
TI_1241113213   .e 1678 to 2639 1032 to 72       961/1244
(77 %)
10 diff
(99.2 %id)
TI_1242418596   .e 1678 to 2640 1016 to 59     Submitted on the opposite strand 958/1157
(82 %)
11 diff
(99.1 %id)
TI_1241108715   .e 1681 to 2639 1019 to 67       953/1191
(80 %)
10 diff
(99.2 %id)
TI_1241109397   .e 1953 to 2639 8 to 694       687/1244
(55 %)
4 diff
(99.7 %id)
AA181597   .e 2138 to 2507 1 to 369   fully sequenced,   369/369
(100 %)
2 diff
(99.5 %id)
AA884962 pooled .e 2168 to 2667 1 to 501     Submitted on the opposite strand 501/501
(100 %)
7 diff
(98.7 %id)
AI092781 heart .e 2168 to 2593 1 to 426     Submitted on the opposite strand 426/426
(100 %)
0 diff
(100 %id)
AI185218 lung .e 2168 to 2668 1 to 501     Submitted on the opposite strand 501/501
(100 %)
0 diff
(100 %id)
AI399781 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 2168 to 2622 1 to 455     Submitted on the opposite strand 455/455
(100 %)
0 diff
(100 %id)
AI918800 pooled germ cell tumors .e 2168 to 2612 1 to 445     Submitted on the opposite strand 445/445
(100 %)
2 diff
(99.6 %id)
AI911114 pooled .e 2168 to 2667 1 to 500     Submitted on the opposite strand 500/500
(100 %)
4 diff
(99.2 %id)
AW629146 pooled .e 2168 to 2703 1 to 536     Submitted on the opposite strand 536/536
(100 %)
1 diff
(99.9 %id)
BE676006 B-cell, chronic lymphotic leukemia .e 2168 to 2711 1 to 544     Submitted on the opposite strand 544/544
(100 %)
2 diff
(99.7 %id)
BE676221 B-cell, chronic lymphotic leukemia .e 2168 to 2620 1 to 453     Submitted on the opposite strand 453/453
(100 %)
2 diff
(99.6 %id)
BF732282 fibrotheoma, ovary .e 2187 to 2600 1 to 416     Submitted on the opposite strand 416/418
(99 %)
15 diff
(96.5 %id)
AA827781 germinal center B cell .e 2188 to 2668 1 to 481     Submitted on the opposite strand 481/481
(100 %)
3 diff
(99.4 %id)
AW241744 pooled .e 2206 to 2698 1 to 492     Submitted on the opposite strand 492/492
(100 %)
9 diff
(98.2 %id)
AW197745 pooled .e 2206 to 2620 1 to 415     Submitted on the opposite strand 415/415
(100 %)
1 diff
(99.8 %id)
BE219984 carcinoid, lung .e 2210 to 2598 1 to 389     Submitted on the opposite strand 389/389
(100 %)
3 diff
(99.3 %id)
AA477954 ovarian tumor, ovary .e 2433 to 2957 529 to 1     Submitted on the opposite strand 529/529
(100 %)
24 diff
(95.5 %id)
AA621079   .e 2434 to 2964 544 to 15   AAA   530/530
(100 %)
8 diff
(98.5 %id)
AW403800 lymph .e 2447 to 2956 533 to 24   AAA Submitted on the opposite strand 510/510
(100 %)
3 diff
(99.5 %id)
BQ877833 epidermoid carcinoma, cell line, salivary gland .e 2454 to 2964 1 to 511   AAA   511/511
(100 %)
0 diff
(100 %id)
BM708595 eye, RPE and Choroid .e 2460 to 2958 506 to 8     Submitted on the opposite strand 499/506
(98 %)
0 diff
(100 %id)
AA181647   .e 2494 to 2940 450 to 1   fully sequenced,   450/450
(100 %)
8 diff
(98.3 %id)
AI741696 pooled .e 2502 to 2964 476 to 15   AAA   462/465
(99 %)
13 diff
(97.3 %id)
CB243908 Human Lung Epithelial cells, lung .e 2504 to 2964 479 to 19   AAA   461/467
(98 %)
1 diff
(99.8 %id)
AA679278 liver and spleen .e 2519 to 3140 620 to 1   tiling clone,   620/620
(100 %)
7 diff
(98.9 %id)
AA452573   .e 2537 to 2964 443 to 15   AAA   429/429
(100 %)
4 diff
(99.1 %id)
BF845863 lung_normal .e 2595 to 2789 216 to 23     Submitted on the opposite strand 194/216
(89 %)
0 diff
(100 %id)
AA514747 breast .e 2643 to 2963 321 to 1       321/321
(100 %)
0 diff
(100 %id)
AI051727 liver and spleen .e 2728 to 3140 411 to 1       411/411
(100 %)
1 diff
(99.8 %id)
EU887561   .f 1 to 2142 1 to 2142 exact tiling clone,   2142/2142
(100 %)
0 diff
(100 %id)
EU887566   .g 1 to 2472 1 to 2472 exact tiling clone,   2472/2472
(100 %)
0 diff
(100 %id)
EU887562   .h 1 to 2103 1 to 2103 exact tiling clone,   2103/2103
(100 %)
0 diff
(100 %id)
BC143457 Brain, cerebellum, PCR rescued clones .i 1 to 2195 1 to 2195 H665R tiling clone,   2195/2195
(100 %)
2 diff
(100.0 %id)
TI_2194577729   .i 912 to 2008 9 to 1101       1095/1266
(86 %)
21 diff
(98.4 %id)
TI_2194576119   .i 1095 to 2201 1142 to 49     Submitted on the opposite strand 1094/1253
(87 %)
13 diff
(99.0 %id)
TI_2194575894   .i 1109 to 2201 1120 to 48     Submitted on the opposite strand 1073/1160
(92 %)
37 diff
(96.9 %id)
TI_2194575900   .i 1150 to 2201 1089 to 48     Submitted on the opposite strand 1042/1229
(84 %)
14 diff
(98.9 %id)
TI_2194577730   .i 1268 to 2201 1 to 934       934/1253
(74 %)
13 diff
(99.0 %id)
TI_2194577731   .i 1597 to 2201 9 to 613       605/1258
(48 %)
11 diff
(99.2 %id)
DR005535 Prostate .j 1 to 575 5 to 585       585/585
(100 %)
7 diff
(98.9 %id)
AK293760 cerebellum .j 1 to 1920 2 to 1921 C279G S293G tiling clone,   1921/1921
(100 %)
4 diff
(99.8 %id)
DA095734 cerebellum .j 1 to 548 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
CR989454 T-Lymphocytes .k 1 to 317 317 to 1   tiling clone, Submitted on the opposite strand 317/318
(99 %)
0 diff
(100 %id)
AW014910   .k 66 to 476 411 to 1       411/411
(100 %)
4 diff
(99.1 %id)
BF515172   .k 66 to 476 411 to 1       411/415
(99 %)
4 diff
(99.1 %id)
NM_172388.1   .k 74 to 3697 1 to 3624 exact RefSeq, AAA   3624/3624
(100 %)
0 diff
(100 %id)
U80919   .k 246 to 3697 1 to 3452 exact tiling clone, AAA   3452/3452
(100 %)
5 diff
(99.9 %id)
BF940750 fibrotheoma, ovary .k 652 to 1139 488 to 1       488/629
(77 %)
2 diff
(99.7 %id)
BF109213 pooled .k 652 to 1094 443 to 1       443/557
(79 %)
4 diff
(99.3 %id)
AA830939 germinal center B cell .k 653 to 1087 436 to 1       436/457
(95 %)
11 diff
(97.6 %id)
AA258540 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .k 663 to 1094 433 to 1       433/442
(97 %)
22 diff
(95.1 %id)
AA258480 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .k 679 to 982 304 to 1       304/304
(100 %)
34 diff
(88.9 %id)
CN355583 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .k 687 to 1290 1 to 604       604/604
(100 %)
1 diff
(99.9 %id)
AA744825 germinal center B cell .k 688 to 1094 409 to 1       409/409
(100 %)
14 diff
(96.6 %id)
AA765302 germinal center B cell .k 699 to 1087 378 to 1       378/378
(100 %)
17 diff
(95.6 %id)
BG960587 colon .k 739 to 1006 6 to 274       269/274
(98 %)
9 diff
(96.8 %id)
DR005425 Prostate .k 786 to 1435 8 to 657       650/657
(98 %)
8 diff
(98.8 %id)
BE646604 B-cell, chronic lymphotic leukemia .k 811 to 1094 284 to 1       284/284
(100 %)
16 diff
(94.4 %id)
DB088601 testis .k 820 to 1352 2 to 534   capped   533/533
(100 %)
1 diff
(99.9 %id)
AI659665 Prostate .k 868 to 1094 227 to 1       227/227
(100 %)
0 diff
(100 %id)
AW204426   .k 904 to 1148 246 to 1       246/246
(100 %)
1 diff
(99.6 %id)
BQ710766 Spleen .k 930 to 1834 11 to 919       909/921
(98 %)
27 diff
(97.1 %id)
BQ710141 Spleen .k 934 to 1715 1 to 788       788/922
(85 %)
17 diff
(98.2 %id)
BQ882759 Spleen .k 934 to 1822 1 to 895   tiling clone,   895/911
(98 %)
20 diff
(97.9 %id)
BQ328971 lung_normal .k 1051 to 1419 12 to 390       379/390
(97 %)
9 diff
(97.7 %id)
TI_154136708   .k 1136 to 1788 18 to 672     Submitted on the opposite strand 655/1299
(50 %)
50 diff
(96.2 %id)
TI_154136710   .k 1136 to 1826 18 to 719     Submitted on the opposite strand 702/1301
(53 %)
30 diff
(97.7 %id)
AA774502 heart .k 1142 to 1327 1 to 187     Submitted on the opposite strand 187/248
(75 %)
3 diff
(98.8 %id)
AA889920 parathyroid gland, parathyroid tumor .k 1142 to 1511 1 to 370     Submitted on the opposite strand 370/370
(100 %)
7 diff
(98.2 %id)
AI377552 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .k 1142 to 1517 1 to 376     Submitted on the opposite strand 376/376
(100 %)
0 diff
(100 %id)
AI377242 pooled .k 1142 to 1689 1 to 548   tiling clone, Submitted on the opposite strand 548/548
(100 %)
1 diff
(99.9 %id)
AI377243 pooled .k 1142 to 1694 1 to 553     Submitted on the opposite strand 553/554
(99 %)
14 diff
(97.5 %id)
AI433773 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .k 1142 to 1516 1 to 375     Submitted on the opposite strand 375/375
(100 %)
0 diff
(100 %id)
AA774492 heart .k 1143 to 1550 1 to 405     Submitted on the opposite strand 405/414
(97 %)
10 diff
(97.6 %id)
AI379896 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .k 1160 to 1509 1 to 350     Submitted on the opposite strand 350/350
(100 %)
0 diff
(100 %id)
AI167635 pooled .k 1185 to 1515 1 to 331     Submitted on the opposite strand 331/331
(100 %)
7 diff
(97.9 %id)
AA872561 germinal center B cell .k 1212 to 1330 1 to 119     Submitted on the opposite strand 119/127
(93 %)
2 diff
(98.5 %id)
AA809331 germinal center B cell .k 1230 to 1482 1 to 253     Submitted on the opposite strand 253/253
(100 %)
6 diff
(97.7 %id)
AA193387 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .k 1303 to 1521 224 to 2     Submitted on the opposite strand 220/225
(97 %)
6 diff
(97.4 %id)
CR615430 B cells (Ramos cell line) Cot 25-normalized .k 1910 to 3664 1 to 1755   tiling clone,   1755/1755
(100 %)
0 diff
(100 %id)
AU137517 placenta .k 2011 to 2689 2 to 680   capped   679/679
(100 %)
1 diff
(99.9 %id)
BX372225   .k 2080 to 2895 820 to 1       820/930
(88 %)
15 diff
(98.4 %id)
AL561146 B cells from Burkitt lymphoma .k 2103 to 2750 221 to 864   fully sequenced,   770/822
(93 %)
19 diff
(97.7 %id)
AW403951 lymph .k 2328 to 2794 7 to 473       467/473
(98 %)
6 diff
(98.8 %id)
TI_154140683   .k 2328 to 2901 80 to 653       574/574
(100 %)
4 diff
(99.4 %id)
CF122838 CNCAP(3)T-225 cell line, Prostate .k 2381 to 2979 1 to 600       600/600
(100 %)
5 diff
(99.2 %id)
TI_154182549   .k 2388 to 3201 72 to 885       814/815
(99 %)
9 diff
(98.9 %id)
TI_154181962   .k 2391 to 3115 72 to 791       720/862
(83 %)
16 diff
(98.2 %id)
TI_154181858   .k 2393 to 3235 72 to 903       832/922
(90 %)
37 diff
(96.0 %id)
BC033848 Bladder, transitional cell papilloma .k 2497 to 3697 11 to 1211   available from MGC, AAA   1201/1201
(100 %)
1 diff
(100.0 %id)
BG260590 bladder, transitional cell papilloma, cell line .k 2498 to 3197 1 to 689   available from MGC,   689/920
(74 %)
18 diff
(98.1 %id)
BX363561   .k 2581 to 3671 1079 to 1       1079/1101
(98 %)
18 diff
(98.4 %id)
BG924592 cartilage .k 2622 to 3143 76 to 598       523/530
(98 %)
6 diff
(98.9 %id)
BQ363990 stomach .k 2714 to 3242 1 to 529       529/529
(100 %)
16 diff
(97.0 %id)
AI700887 Kidney .k 2719 to 3055 337 to 1       337/337
(100 %)
0 diff
(100 %id)
AL582426 B cells from Burkitt lymphoma .k 2720 to 3664 939 to 1   fully sequenced,   939/939
(100 %)
5 diff
(99.5 %id)
DB376787 placenta .k 3111 to 3696 582 to 1       582/582
(100 %)
24 diff
(95.9 %id)
AW574537 lymph .l 1 to 614 1 to 614 H145X tiling clone, Submitted on the opposite strand 614/614
(100 %)
2 diff
(99.7 %id)
AI263786 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .m 1 to 365 13 to 375   tiling clone, Submitted on the opposite strand 363/375
(96 %)
7 diff
(98.2 %id)
BM142192 Islets of Langerhans, Pancreas .m 30 to 481 1 to 452       452/452
(100 %)
1 diff
(99.8 %id)
BM354063 Islets of Langerhans, Pancreas .m 48 to 508 1 to 461       461/461
(100 %)
0 diff
(100 %id)
AA808756 germinal center B cell .m 55 to 431 1 to 375     Submitted on the opposite strand 375/375
(100 %)
6 diff
(98.4 %id)
TI_154140641   .m 73 to 760 783 to 96   tiling clone, AAA Submitted on the opposite strand 688/693
(99 %)
17 diff
(97.6 %id)
AA832223 germinal center B cell .m 107 to 405 1 to 299     Submitted on the opposite strand 299/299
(100 %)
2 diff
(99.4 %id)
AI568403 B-cell, chronic lymphotic leukemia .n 1 to 504 1 to 504 G98X tiling clone, Submitted on the opposite strand 504/504
(100 %)
0 diff
(100 %id)
AV731300 hypothalamus .o 1 to 405 1 to 405   tiling clone,   405/407
(99 %)
2 diff
(99.6 %id)
AI568690 B-cell, chronic lymphotic leukemia .o 391 to 840 450 to 1 exact tiling clone,   450/450
(100 %)
0 diff
(100 %id)
AK309546 lung .p 1 to 1334 2 to 1335 V81A tiling clone,   1335/1335
(100 %)
4 diff
(99.8 %id)
DA595004 lung .p 1 to 585 2 to 586 V81A capped   585/585
(100 %)
3 diff
(99.5 %id)
DA178684 amygdala .p 31 to 595 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA595294 lung .p 31 to 606 2 to 582   capped   581/581
(100 %)
7 diff
(98.8 %id)
TI_57181579   .p 33 to 707 54 to 727       674/727
(92 %)
6 diff
(99.2 %id)
BI766600 pooled lung and spleen .p 42 to 707 1 to 665   tiling clone,   665/665
(100 %)
3 diff
(99.6 %id)
DA585655 lung .p 58 to 603 2 to 548   capped   547/547
(100 %)
2 diff
(99.7 %id)
BX096672   .p 1173 to 1830 1 to 658   tiling clone,   658/658
(100 %)
2 diff
(99.7 %id)
AA443869   .p 1203 to 1643 41 to 483       443/483
(91 %)
6 diff
(98.8 %id)
BM718057 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .p 1219 to 1543 1 to 325   fully sequenced,   325/325
(100 %)
0 diff
(100 %id)
W69179 heart .p 1247 to 1699 1 to 457   fully sequenced,   457/457
(100 %)
12 diff
(97.4 %id)
AW968386   .p 1321 to 1883 29 to 591   tiling clone,   563/591
(95 %)
6 diff
(99.0 %id)
AA465502 germinal center B cell .p 1330 to 1789 1 to 460       460/460
(100 %)
4 diff
(99.2 %id)
AA477581 ovarian tumor, ovary .p 1372 to 1916 1 to 545       545/545
(100 %)
1 diff
(99.9 %id)
TI_154167919   .p 1411 to 2079 792 to 118     Submitted on the opposite strand 675/865
(78 %)
0 diff
(100 %id)
H63794 liver and spleen .p 1439 to 1839 12 to 426       415/426
(97 %)
17 diff
(96.1 %id)
AA115542 uterus .p 1451 to 1854 1 to 408       408/408
(100 %)
3 diff
(99.3 %id)
BU617232 Bone, Subchondral Bone .p 1470 to 2078 627 to 19   AAA   609/609
(100 %)
1 diff
(99.9 %id)
BQ009672 Chondrosarcoma, Left Pubic Bone .p 1478 to 2078 619 to 19   AAA   601/601
(100 %)
2 diff
(99.7 %id)
R05610 liver and spleen .p 1487 to 1792 1 to 316   fully sequenced,   316/316
(100 %)
16 diff
(95.0 %id)
BM680507 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .p 1513 to 2078 585 to 19   fully sequenced, AAA   567/567
(100 %)
1 diff
(99.9 %id)
AI762623 colon, colon tumor, RER+ .p 1533 to 2079 550 to 4       547/550
(99 %)
0 diff
(100 %id)
TI_154152069   .p 1543 to 2079 625 to 89     Submitted on the opposite strand 537/546
(98 %)
0 diff
(100 %id)
H44318 breast .p 1547 to 1873 1 to 330   fully sequenced,   330/330
(100 %)
2 diff
(99.4 %id)
FN093100 breast carcinoma .p 1553 to 1655 1 to 105       105/105
(100 %)
3 diff
(97.2 %id)
AJ706930 heart .p 1565 to 2067 20 to 522       503/522
(96 %)
6 diff
(98.9 %id)
AJ710338 heart .p 1565 to 2067 21 to 522       502/522
(96 %)
6 diff
(98.9 %id)
AA664145 lung .p 1574 to 2060 485 to 1       485/485
(100 %)
3 diff
(99.4 %id)
T52914 ovary .p 1577 to 1941 1 to 368       368/370
(99 %)
6 diff
(98.4 %id)
CF138096 lymph .p 1578 to 2079 531 to 30     Submitted on the opposite strand 502/531
(94 %)
0 diff
(100 %id)
AA845601 parathyroid gland, parathyroid tumor .p 1595 to 2078 501 to 19   AAA   483/483
(100 %)
5 diff
(99.0 %id)
AI094595 brain, glioblastoma (pooled) .p 1601 to 2079 478 to 1       478/478
(100 %)
4 diff
(99.2 %id)
W60577 heart .p 1608 to 2066 1 to 460       460/460
(100 %)
4 diff
(99.2 %id)
W60634 heart .p 1609 to 2079 1 to 473       473/475
(99 %)
4 diff
(99.2 %id)
AA505718 breast .p 1614 to 2079 471 to 7       465/471
(98 %)
0 diff
(100 %id)
AI823456 Kidney .p 1620 to 2081 469 to 8       462/469
(98 %)
0 diff
(100 %id)
AI742391 pooled .p 1621 to 2079 466 to 7       460/466
(98 %)
0 diff
(100 %id)
TI_154159322   .p 1621 to 2079 582 to 124   tiling clone, Submitted on the opposite strand 459/492
(93 %)
0 diff
(100 %id)
DB520956 testis .p 1629 to 2078 1 to 450     Submitted on the opposite strand 450/450
(100 %)
0 diff
(100 %id)
TI_154166585   .p 1630 to 2079 556 to 107     Submitted on the opposite strand 450/477
(94 %)
0 diff
(100 %id)
AW629138 pooled .p 1641 to 2079 443 to 5       439/443
(99 %)
0 diff
(100 %id)
AI031545 parathyroid gland, parathyroid tumor .p 1643 to 2079 470 to 34   AAA   437/449
(97 %)
0 diff
(100 %id)
AI478166 Kidney .p 1646 to 2079 438 to 5       434/438
(99 %)
0 diff
(100 %id)
CF137187 lymph .p 1649 to 2079 464 to 34     Submitted on the opposite strand 431/464
(92 %)
0 diff
(100 %id)
FN067438 breast carcinoma .p 1653 to 1756 106 to 3     Submitted on the opposite strand 104/106
(98 %)
0 diff
(100 %id)
AW885285 ovary .p 1663 to 1832 13 to 184       172/186
(92 %)
7 diff
(96.3 %id)
BU430638 lymph .p 1667 to 2079 428 to 16     Submitted on the opposite strand 413/428
(96 %)
0 diff
(100 %id)
AI889944 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .p 1672 to 2072 405 to 5       401/405
(99 %)
0 diff
(100 %id)
W69180 heart .p 1673 to 2078 444 to 28   fully sequenced, AAA   417/417
(100 %)
12 diff
(97.2 %id)
AI004286 pooled .p 1674 to 2079 411 to 6       406/411
(98 %)
0 diff
(100 %id)
AJ346310 pectoral muscle (after mastectomy) .p 1677 to 2078 1 to 401       401/401
(100 %)
4 diff
(99.1 %id)
AW503419 lymph .p 1683 to 2079 437 to 41     Submitted on the opposite strand 397/437
(90 %)
0 diff
(100 %id)
AA668944 lung .p 1691 to 2076 386 to 1       386/386
(100 %)
7 diff
(98.2 %id)
BF061876 pooled germ cell tumors .p 1696 to 2078 397 to 15   AAA   383/383
(100 %)
9 diff
(97.7 %id)
W21286 lung .p 1704 to 2079 1 to 379       379/379
(100 %)
5 diff
(98.7 %id)
AA476720   .p 1706 to 2079 378 to 7       372/378
(98 %)
0 diff
(100 %id)
AI004842   .p 1753 to 2078 339 to 15   AAA   325/325
(100 %)
4 diff
(98.8 %id)
R05504 liver and spleen .p 1762 to 2053 292 to 1   fully sequenced,   292/292
(100 %)
2 diff
(99.4 %id)
AW505454 lymph .p 1786 to 2079 320 to 27     Submitted on the opposite strand 294/320
(91 %)
0 diff
(100 %id)
AI000887 breast .p 1790 to 2079 296 to 7       290/296
(97 %)
0 diff
(100 %id)
AA722923 heart .p 1805 to 2079 274 to 1       274/274
(100 %)
3 diff
(99.0 %id)
BF959943 nervous_normal .p 1830 to 2052 16 to 238       223/238
(93 %)
6 diff
(97.5 %id)
AA115053 uterus .p 1840 to 2078 237 to 1       237/239
(99 %)
2 diff
(99.2 %id)
H44319 breast .p 1843 to 2079 244 to 1   fully sequenced,   244/244
(100 %)
3 diff
(98.8 %id)
AI597774 adenocarcinoma, Pancreas .p 1857 to 2078 242 to 21   AAA   222/222
(100 %)
3 diff
(98.7 %id)
DB319400 lung .p 1895 to 2078 184 to 1       184/184
(100 %)
0 diff
(100 %id)
CB051616 leiomyosarcoma, soft tissue .p 1915 to 2078 207 to 44   AAA   164/164
(100 %)
1 diff
(99.4 %id)
H63754 liver and spleen .p 1916 to 2052 136 to 1       136/136
(100 %)
2 diff
(98.6 %id)
AA477455.
matches multiple genes
ovarian tumor, ovary .p 1931 to 2080 150 to 1     also hits gene STX1A 150/153
(98 %)
3 diff
(98.1 %id)
AA902994 leiomyosarcoma, soft tissue .p 1931 to 2078 162 to 15   AAA   148/151
(98 %)
0 diff
(100 %id)
AI125841   .q 1 to 528 528 to 1 exact tiling clone,   528/528
(100 %)
0 diff
(100 %id)
CR600003 B cells (Ramos cell line) Cot 25-normalized .r 1 to 1668 1 to 1668 exact tiling clone,   1668/1668
(100 %)
0 diff
(100 %id)
BX363562   .r 2 to 1026 1 to 1014 exact     1014/1039
(97 %)
19 diff
(98.2 %id)
AW383984 head_neck .s-u 1 to 597 1 to 598 E2K R11T G12A R13A H14G ... tiling clone,   598/601
(99 %)
10 diff
(98.4 %id)
BG218835   .s-u 311 to 1093 1 to 784   tiling clone,   784/784
(100 %)
6 diff
(99.3 %id)
BG219831   .s-u 311 to 911 1 to 601       601/778
(77 %)
42 diff
(94.7 %id)
BG208295   .s-u 313 to 1065 1 to 753       753/757
(99 %)
10 diff
(98.7 %id)
AA361419   .s-u 408 to 726 1 to 321   tiling clone,   321/324
(99 %)
6 diff
(98.2 %id)
AA361081   .s-u 752 to 979 1 to 228       228/228
(100 %)
0 diff
(100 %id)
AV743746 cord Blood .s-u 768 to 1200 44 to 467   AAA   424/467
(90 %)
6 diff
(98.8 %id)
CF122318 CNCAP(3)T-225 cell line, Prostate .s-u 803 to 1183 11 to 392       382/392
(97 %)
6 diff
(98.5 %id)
CF122390 CNCAP(3)T-225 cell line, Prostate .s-u 806 to 1019 13 to 226       214/226
(94 %)
6 diff
(97.4 %id)
AV743444 cord Blood .s-u 862 to 1200 1 to 328   tiling clone, AAA   328/328
(100 %)
7 diff
(97.9 %id)
CB114439 Liver .s-u 948 to 1164 1 to 217       217/217
(100 %)
1 diff
(99.6 %id)
DB049830 testis .t 1 to 565 2 to 566 exact tiling clone, capped   565/565
(100 %)
2 diff
(99.7 %id)
DB455527 testis Gene NFATC1, variant not shown              
BP398371 pancreatic islet Gene NFATC1, variant not shown         Submitted on the opposite strand    
AI654693 pooled germ cell tumors Gene NFATC1, variant not shown         Suspected internal deletion, this clone was ignored    
AI962357 pooled germ cell tumors Gene NFATC1, variant not shown         Suspected internal deletion, this clone was ignored    
BC045628 testis Gene NFATC1, variant not shown       available from MGC, AAA      
BI460006 testis Gene NFATC1, variant not shown       available from MGC,      
CR986435 T-Lymphocytes Gene NFATC1, variant not shown         Suspected internal deletion, this clone was ignored    
CR998138 T-Lymphocytes Gene NFATC1, variant not shown         Suspected internal deletion, this clone was ignored    
CR990026 T-Lymphocytes Gene NFATC1, variant not shown         Suspected internal deletion, this clone was ignored    
DB071332 testis Gene NFATC1, variant not shown       capped      
DB204628 trachea Gene NFATC1, variant not shown       capped      
DB348537 trachea Gene NFATC1, variant not shown              
DB272477 uterus Gene NFATC1, variant not shown       capped      
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s-u, .t Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI