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Gene NEK3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
153 supporting clones for gene NEK3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK131359 trachea .a 1 to 3254 2 to 3255 exact tiling clone, available from FLJ,   3255/3255
(100 %)
0 diff
(100 %id)
DB207457 trachea .a 1 to 552 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DB348663 trachea .a 2725 to 3254 530 to 1       530/530
(100 %)
0 diff
(100 %id)
CR612915 Neuroblastoma Cot 25-normalized .b 1 to 1970 2 to 1971 exact tiling clone,   1971/1971
(100 %)
0 diff
(100 %id)
BX395060 Neuroblastoma Cot 25-normalized .b 1 to 1029 2 to 1028       1028/1104
(93 %)
12 diff
(99.0 %id)
BX395059 Neuroblastoma Cot 25-normalized .b 1013 to 1970 958 to 1       958/1052
(91 %)
3 diff
(99.8 %id)
NM_001146099.1   .c 1 to 2341 5 to 2345 exact RefSeq,   2345/2345
(100 %)
0 diff
(100 %id)
DA733733   .c 1 to 678 5 to 680   capped   679/687
(98 %)
7 diff
(99.0 %id)
DB185803 liver, tumor tissue .c 1 to 565 2 to 566   tiling clone, capped   565/565
(100 %)
0 diff
(100 %id)
BQ648157 hepatocellular carcinoma, cell line, Liver .c 61 to 972 1 to 917       917/945
(97 %)
9 diff
(99.1 %id)
BX475731   .c 178 to 724 1 to 547       547/547
(100 %)
1 diff
(99.9 %id)
DA843472 placenta .c 237 to 810 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BX375816 Neuroblastoma Cot 25-normalized .c 262 to 1172 1 to 908       908/908
(100 %)
14 diff
(98.5 %id)
DA655705   .c 262 to 782 2 to 522   capped   521/521
(100 %)
0 diff
(100 %id)
DB454922.
matches multiple genes
testis .c 263 to 753 1 to 491     also hits gene mypy 491/491
(100 %)
1 diff
(99.8 %id)
DA427321 colon .c 266 to 832 2 to 568   capped   567/573
(98 %)
1 diff
(99.9 %id)
BI093553 cervix .c 270 to 1059 1 to 793       793/793
(100 %)
8 diff
(99.0 %id)
DA545106   .c 285 to 845 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
FN124154 breast carcinoma .c 288 to 347 1 to 60       60/61
(98 %)
3 diff
(95.1 %id)
DA751336   .c 294 to 864 2 to 572   capped   571/572
(99 %)
1 diff
(99.9 %id)
AB072828   .c 328 to 1937 1 to 1610 S14F     1610/1610
(100 %)
1 diff
(100.0 %id)
BQ432111 eye, retinoblastoma .c 348 to 1176 1 to 830       830/913
(90 %)
2 diff
(99.8 %id)
TI_1948135432   .c 371 to 1036 126 to 795       670/1323
(50 %)
15 diff
(98.9 %id)
TI_1948135433   .c 371 to 1184 133 to 951       819/1361
(60 %)
20 diff
(98.6 %id)
TI_1948136144   .c 371 to 996 124 to 751       628/1285
(48 %)
12 diff
(99.1 %id)
TI_1948136145   .c 371 to 1176 129 to 936       808/1415
(57 %)
26 diff
(98.2 %id)
TI_1948136494   .c 371 to 924 128 to 695       566/1378
(41 %)
30 diff
(97.9 %id)
TI_1948136495   .c 371 to 975 131 to 740       610/1436
(42 %)
11 diff
(99.3 %id)
CV029372 mixed .c 373 to 1039 1 to 663       663/665
(99 %)
11 diff
(98.4 %id)
CR606903 B cells (Ramos cell line) Cot 25-normalized .c 489 to 2323 1 to 1835   tiling clone,   1835/1835
(100 %)
0 diff
(100 %id)
BX364188   .c 489 to 1380 1 to 893   fully sequenced,   891/891
(100 %)
1 diff
(99.9 %id)
DB014416 esophageal, tumor tissue .c 576 to 1139 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
Z25434   .c 598 to 920 1 to 323       323/342
(94 %)
6 diff
(98.3 %id)
AA308678 colon .c 688 to 1122 1 to 435       435/435
(100 %)
1 diff
(99.8 %id)
AW960403   .c 689 to 1252 1 to 565       565/587
(96 %)
12 diff
(98.0 %id)
CB145908 Liver .c 693 to 1137 1 to 446       446/446
(100 %)
4 diff
(99.2 %id)
AA490364 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 759 to 828 1 to 70       70/70
(100 %)
0 diff
(100 %id)
EC572548 Prostate .c 777 to 878 108 to 8       101/108
(93 %)
0 diff
(100 %id)
EC521220 Prostate .c 784 to 876 99 to 6       94/99
(94 %)
2 diff
(98.0 %id)
AW134598   .c 787 to 1255 469 to 1       469/473
(99 %)
4 diff
(99.2 %id)
AI360208 anaplastic oligodendroglioma, brain .c 820 to 1238 419 to 1       419/419
(100 %)
0 diff
(100 %id)
AI885400 anaplastic oligodendroglioma, brain .c 820 to 1238 419 to 1       419/419
(100 %)
0 diff
(100 %id)
BF762035 colon_est .c 839 to 1161 343 to 21     Submitted on the opposite strand 323/343
(94 %)
0 diff
(100 %id)
BU943777 mixed (pool of 40 RNAs) .c 882 to 1209 1 to 328       328/328
(100 %)
2 diff
(99.4 %id)
BE811358 amnion_normal .c 996 to 1218 226 to 2       225/245
(91 %)
10 diff
(96.0 %id)
BF835538 head_neck .c 1047 to 1231 202 to 21     Submitted on the opposite strand 182/202
(90 %)
1 diff
(99.6 %id)
BM696814 eye, lens .c 1196 to 1730 1 to 535       535/535
(100 %)
0 diff
(100 %id)
TI_1948135434   .c 1251 to 1841 718 to 119       600/1388
(43 %)
20 diff
(98.6 %id)
BX375815 Neuroblastoma Cot 25-normalized .c 1254 to 2284 1022 to 1       1022/1029
(99 %)
20 diff
(98.1 %id)
AW364789 denis_drash .c 1277 to 1622 364 to 19       346/366
(94 %)
1 diff
(99.8 %id)
BX364187   .c 1346 to 2323 977 to 1   fully sequenced,   977/977
(100 %)
17 diff
(98.3 %id)
AA234866.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1400 to 1732 1 to 334     also hits gene CDK2AP1 334/334
(100 %)
1 diff
(99.8 %id)
TI_1948136497   .c 1404 to 1841 562 to 122       441/1176
(37 %)
12 diff
(99.0 %id)
EL955604 eyeball .c 1428 to 1576 1 to 149       149/152
(98 %)
5 diff
(96.8 %id)
AW885868 ovary .c 1465 to 1740 277 to 2       276/283
(97 %)
2 diff
(99.3 %id)
BF888116 testis_normal .c 1476 to 1752 292 to 19     Submitted on the opposite strand 274/307
(89 %)
1 diff
(99.7 %id)
TI_159707350   .c 1498 to 2345 963 to 128       836/1098
(76 %)
18 diff
(98.4 %id)
AW938843 denis_drash .c 1519 to 1809 18 to 307       290/307
(94 %)
6 diff
(98.1 %id)
AI971454 pooled germ cell tumors .c 1558 to 2337 785 to 6       780/785
(99 %)
8 diff
(99.0 %id)
AI191920   .c 1563 to 2336 785 to 13   AAA   771/773
(99 %)
16 diff
(98.0 %id)
BU608251 Human Lung Epithelial cells, lung .c 1590 to 2336 763 to 19   AAA   745/745
(100 %)
2 diff
(99.8 %id)
AI659549 Prostate .c 1615 to 2337 725 to 1       725/725
(100 %)
6 diff
(99.2 %id)
BX324774 Placenta Cot 25-normalized .c 1629 to 2337 1 to 709       709/709
(100 %)
1 diff
(99.9 %id)
AW043698 pooled .c 1629 to 2336 722 to 16   AAA   707/715
(98 %)
5 diff
(99.4 %id)
TI_154112296   .c 1629 to 2337 793 to 89       705/1014
(69 %)
10 diff
(99.1 %id)
BF446481 carcinoid, lung .c 1631 to 2336 693 to 3       691/701
(98 %)
15 diff
(97.9 %id)
TI_149294069   .c 1631 to 2340 789 to 82   AAA   708/709
(99 %)
4 diff
(99.5 %id)
BU622080 Cell Line, Chondrosarcoma .c 1631 to 2336 722 to 19   AAA   704/721
(97 %)
3 diff
(99.6 %id)
AI627473 Kidney .c 1632 to 2337 704 to 1       704/712
(98 %)
15 diff
(97.9 %id)
AA429561   .c 1640 to 2031 1 to 392   fully sequenced,   392/392
(100 %)
0 diff
(100 %id)
FN173180 breast carcinoma .c 1641 to 1741 1 to 101       101/101
(100 %)
0 diff
(100 %id)
BM689213 eye, eye anterior segment .c 1650 to 2055 9 to 414   fully sequenced,   406/414
(98 %)
6 diff
(98.6 %id)
AA873814 germinal center B cell .c 1696 to 2333 658 to 22   AAA   637/637
(100 %)
9 diff
(98.6 %id)
AI669607 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .c 1698 to 2340 644 to 1       644/644
(100 %)
19 diff
(97.1 %id)
AW022238 cochlea, ear .c 1715 to 2150 1 to 436       436/436
(100 %)
4 diff
(99.1 %id)
BM984985 lung .c 1732 to 2340 627 to 19   AAA   609/609
(100 %)
2 diff
(99.7 %id)
BE677048 dorsal root ganglia .c 1754 to 2337 584 to 1       584/642
(90 %)
19 diff
(97.1 %id)
AW614775 colon, moderately-differentiated adenocarcinoma .c 1758 to 2336 577 to 1       577/577
(100 %)
2 diff
(99.7 %id)
BM714910 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 1758 to 2340 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
DB365715   .c 1768 to 2333 565 to 1       565/565
(100 %)
18 diff
(96.9 %id)
CA448535 Chondrosarcoma, Left Pelvis .c 1772 to 2337 582 to 18       565/582
(97 %)
0 diff
(100 %id)
H15146 whole brain .c 1791 to 2340 564 to 11   AAA   554/561
(98 %)
32 diff
(94.3 %id)
TI_157605553   .c 1840 to 2334 594 to 97       498/597
(83 %)
0 diff
(100 %id)
AI367642   .c 1853 to 2334 486 to 5       482/486
(99 %)
0 diff
(100 %id)
G43267   .c 1855 to 2125 1 to 271       271/271
(100 %)
0 diff
(100 %id)
TI_157604480   .c 1874 to 2340 581 to 114   AAA   468/973
(48 %)
11 diff
(98.9 %id)
AI801489 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .c 1877 to 2336 472 to 13   AAA   460/460
(100 %)
0 diff
(100 %id)
AI281105 adenocarcinoma, colon .c 1881 to 2336 456 to 1       456/457
(99 %)
0 diff
(100 %id)
AI141017 B-cell, chronic lymphotic leukemia .c 1885 to 2340 470 to 15   AAA   456/456
(100 %)
0 diff
(100 %id)
AI248318 liver and spleen .c 1894 to 2337 444 to 1       444/444
(100 %)
0 diff
(100 %id)
AW779042 colon, moderately-differentiated adenocarcinoma .c 1895 to 2337 449 to 7       443/449
(98 %)
0 diff
(100 %id)
AI961086 pooled germ cell tumors .c 1897 to 2335 442 to 4       439/442
(99 %)
0 diff
(100 %id)
AA235350 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1901 to 2340 441 to 2       440/441
(99 %)
0 diff
(100 %id)
BQ005418 Chondrosarcoma, Left Pelvis .c 1909 to 2340 450 to 19   AAA   432/432
(100 %)
16 diff
(96.3 %id)
AI393796 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1913 to 2337 425 to 1       425/425
(100 %)
0 diff
(100 %id)
AI865107 lymph node, lymphoma, follicular mixed small and largecell .c 1915 to 2336 422 to 1       422/422
(100 %)
0 diff
(100 %id)
AI026881   .c 1917 to 2341 427 to 3   tiling clone,   425/427
(99 %)
0 diff
(100 %id)
AW078607 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .c 1934 to 2336 405 to 1       405/405
(100 %)
2 diff
(99.6 %id)
AA490263 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1941 to 2341 401 to 1       401/401
(100 %)
1 diff
(99.8 %id)
AA235283.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1950 to 2334 387 to 3     also hits gene FAP 385/387
(99 %)
0 diff
(100 %id)
AA774582   .c 1953 to 2340 388 to 1       388/388
(100 %)
0 diff
(100 %id)
AI656479 pooled germ cell tumors .c 1953 to 2337 393 to 11       383/393
(97 %)
0 diff
(100 %id)
BE466608 pooled germ cell tumors .c 1953 to 2336 395 to 12   AAA   384/384
(100 %)
2 diff
(99.5 %id)
BI492994.
matches multiple genes
cochlea, ear .c 1959 to 2333 375 to 1     also hits gene wordey 375/382
(98 %)
1 diff
(99.8 %id)
AW022023 cochlea, ear .c 1959 to 2336 8 to 386   AAA   379/386
(98 %)
6 diff
(98.5 %id)
BF111674 pooled .c 1962 to 2337 376 to 1       376/376
(100 %)
0 diff
(100 %id)
AI474772 Kidney .c 1975 to 2336 362 to 1       362/362
(100 %)
0 diff
(100 %id)
AI203671   .c 1978 to 2341 368 to 5       364/368
(98 %)
0 diff
(100 %id)
AI350798 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1980 to 2337 360 to 3       358/360
(99 %)
0 diff
(100 %id)
AA429447   .c 2001 to 2341 341 to 1   fully sequenced,   341/341
(100 %)
3 diff
(99.2 %id)
BM662593 eye, eye anterior segment .c 2025 to 2340 334 to 19   fully sequenced, AAA   316/316
(100 %)
0 diff
(100 %id)
CF529717 placenta .c 2036 to 2334 316 to 18       299/316
(94 %)
0 diff
(100 %id)
CA337497 1st pharyngeal arch (pooled) .c 2057 to 2337 1 to 281       281/327
(85 %)
5 diff
(98.5 %id)
BI754945 brain .d 1 to 701 1 to 701   tiling clone,   701/702
(99 %)
1 diff
(99.9 %id)
TI_57218342   .d 1 to 701 32 to 732       701/733
(95 %)
7 diff
(99.1 %id)
CN368134 embryonic stem cells, DMSO-treated H9 cellline .d 372 to 1044 10 to 683   tiling clone,   674/683
(98 %)
7 diff
(99.0 %id)
BG742677 skin .d 460 to 1261 1 to 803   tiling clone,   803/803
(100 %)
3 diff
(99.7 %id)
DA354126 substantia nigra .e 1 to 568 2 to 569   tiling clone, capped   568/568
(100 %)
1 diff
(99.9 %id)
AI209040 placenta .e 157 to 591 1 to 426   tiling clone, Submitted on the opposite strand 426/430
(99 %)
8 diff
(98.2 %id)
NM_152720.1   .e 160 to 2413 1 to 2255 Q293T T294N A296S E297R S298I ... RefSeq,   2255/2255
(100 %)
1 diff
(100.0 %id)
NM_002498.2   .f 1 to 2391 5 to 2396 Q293T T294N A296S E297R S298I ... RefSeq,   2396/2396
(100 %)
1 diff
(100.0 %id)
NR_027415.1   .f 1 to 2391 5 to 2395 exact RefSeq, tiling clone,   2395/2395
(100 %)
0 diff
(100 %id)
AK290259 colon .f 265 to 2351 1 to 2088 Q293T T294N A296S E297R S298I ...     2088/2088
(100 %)
2 diff
(100.0 %id)
BC019916 Placenta, choriocarcinoma .f 269 to 2386 1 to 2118 Q293T T294N A296S E297R S298I ... available from MGC, AAA   2118/2118
(100 %)
3 diff
(99.9 %id)
Z29067   .f 514 to 2373 1 to 1861       1861/1868
(99 %)
4 diff
(99.8 %id)
DA407862 thalamus .f 843 to 1396 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
AA129853 uterus .f 928 to 1389 1 to 471       469/471
(99 %)
15 diff
(96.9 %id)
CB215347 normal endometrium, late proliferativephase, cycle day 13, uterus .f 1045 to 1687 1 to 643       643/643
(100 %)
0 diff
(100 %id)
TI_1948136146   .f 1046 to 1891 984 to 125       860/1366
(62 %)
26 diff
(98.1 %id)
D31583   .f 1068 to 1367 1 to 301       301/301
(100 %)
1 diff
(99.7 %id)
TI_1948136496   .f 1135 to 1891 882 to 123       760/1294
(58 %)
20 diff
(98.5 %id)
BX101192 multiple sclerosis lesions .f 1149 to 1888 1 to 743       743/743
(100 %)
4 diff
(99.5 %id)
TI_1948135435   .f 1244 to 1891 777 to 124       654/1195
(54 %)
10 diff
(99.2 %id)
TI_1948136147   .f 1244 to 1891 775 to 124       652/1203
(54 %)
11 diff
(99.1 %id)
AW364762 denis_drash .f 1267 to 1705 1 to 441       441/441
(100 %)
8 diff
(98.2 %id)
AW364793 denis_drash .f 1272 to 1717 448 to 6       443/448
(98 %)
8 diff
(98.3 %id)
AW364781 denis_drash .f 1276 to 1402 1 to 125       127/126
(100 %)
10 diff
(92.1 %id)
AA129854 uterus .f 2184 to 2391 209 to 1       209/209
(100 %)
2 diff
(99.1 %id)
BX444037 fetal liver, Liver .g 1 to 941 2 to 942 F3X tiling clone,   941/942
(99 %)
25 diff
(97.4 %id)
DB188083 liver, tumor tissue .h 1 to 316 2 to 317   tiling clone, capped   316/316
(100 %)
5 diff
(98.5 %id)
H86053 eye, retina .h 35 to 398 1 to 367     Submitted on the opposite strand 367/368
(99 %)
9 diff
(97.6 %id)
AL833951 testis .h 47 to 5818 1 to 5773 exact tiling clone, available from DKFZ, AAA   5773/5773
(100 %)
5 diff
(100.0 %id)
BE179742 head_neck .h 1149 to 1548 1 to 398       398/403
(98 %)
3 diff
(99.3 %id)
AI291210 carcinoid, lung .h 3256 to 3802 547 to 1       547/547
(100 %)
2 diff
(99.7 %id)
AW007294 adenocarcinoma, Pancreas .h 3332 to 3803 483 to 11   AAA   473/473
(100 %)
2 diff
(99.6 %id)
AI286151 pooled .h 3353 to 3803 450 to 1       450/457
(98 %)
2 diff
(99.6 %id)
AI580998 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .h 3391 to 3803 413 to 1       413/413
(100 %)
1 diff
(99.8 %id)
CN273224 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .h 3511 to 4243 1 to 734   tiling clone,   734/734
(100 %)
1 diff
(99.9 %id)
AI740730 pooled .h 3572 to 3809 238 to 1       238/238
(100 %)
3 diff
(98.8 %id)
AB074130 vestibule .h 3884 to 4389 1 to 508   AAA   508/512
(99 %)
8 diff
(98.5 %id)
DB347720 liver, tumor tissue .h 5608 to 5815 209 to 1       209/215
(97 %)
2 diff
(99.1 %id)
AW362976 colon .i 1 to 544 1 to 544   tiling clone,   544/544
(100 %)
2 diff
(99.7 %id)
N50327 multiple sclerosis lesions .i 42 to 262 1 to 222   tiling clone,   222/222
(100 %)
1 diff
(99.6 %id)
N51555 multiple sclerosis lesions .i 617 to 1073 462 to 1   tiling clone,   462/464
(99 %)
9 diff
(98.1 %id)
EB387720 eye, optic nerve .j 1 to 739 1 to 738 Y2D S11F E12K F14S L15* tiling clone,   738/738
(100 %)
8 diff
(99.0 %id)
AW206470   .k-u 1 to 352 352 to 1 R67S tiling clone,   352/359
(98 %)
2 diff
(99.5 %id)
TI_153990524   .k-u 1 to 353 416 to 64 R67S     353/592
(59 %)
0 diff
(100 %id)
DR002463 fetal brain .k-u 229 to 747 9 to 527   tiling clone,   519/527
(98 %)
6 diff
(98.9 %id)
AL036419 brain .l-u 1 to 447 1 to 448 exact tiling clone,   448/448
(100 %)
7 diff
(98.5 %id)
DB309262 hippocampus Gene NEK3, variant not shown         This clone was ignored    
DA323860 hippocampus Gene NEK3, variant not shown       capped This clone was ignored    
DB312486 thalamus Gene NEK3, variant not shown         This clone was ignored    
DA408535 thalamus Gene NEK3, variant not shown       capped This clone was ignored    
N59569 liver and spleen Gene NEK3, variant not shown         Submitted on the opposite strand    
N78311 liver and spleen Gene NEK3, variant not shown         Submitted on the opposite strand    
N71122 lung Gene NEK3, variant not shown       fully sequenced, Suspected internal deletion, this clone was ignored    
W01552 lung Gene NEK3, variant not shown       fully sequenced, Suspected internal deletion, this clone was ignored    
AI631468 pooled germ cell tumors Gene NEK3, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k-u, .l-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI